AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0322370

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0322370 MtrunA17_Chr2g0299641 98.819 508 6 0 1 508 1 508 0.0 1044
Msa0322370 MtrunA17_Chr4g0071041 73.859 482 93 7 40 506 6 469 0.0 675
Msa0322370 MtrunA17_Chr8g0342561 56.522 506 176 5 29 506 11 500 0.0 563
Msa0322370 MtrunA17_Chr2g0330061 54.048 420 156 6 86 499 76 464 4.69e-152 442
Msa0322370 MtrunA17_Chr8g0378761 67.626 278 82 2 94 368 126 398 4.28e-140 418
Msa0322370 MtrunA17_Chr8g0378761 59.016 61 24 1 416 476 544 603 5.98e-14 74.7
Msa0322370 MtrunA17_Chr3g0121261 67.286 269 85 1 107 372 5 273 7.73e-137 397
Msa0322370 MtrunA17_Chr1g0176231 66.788 274 91 0 96 369 66 339 3.81e-131 392
Msa0322370 MtrunA17_Chr1g0176231 36.232 138 60 4 366 501 452 563 1.41e-13 73.2
Msa0322370 MtrunA17_Chr1g0178991 47.380 439 189 8 87 486 46 481 4.08e-124 372
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0322370 AT4G33050.3 63.011 465 145 5 41 503 45 484 0.0 575
Msa0322370 AT4G33050.5 63.011 465 145 5 41 503 117 556 0.0 575
Msa0322370 AT4G33050.2 58.250 503 145 6 41 503 45 522 0.0 557
Msa0322370 AT2G26190.3 56.514 545 183 8 1 506 1 530 0.0 545
Msa0322370 AT2G26190.1 56.514 545 183 8 1 506 1 530 0.0 545
Msa0322370 AT5G57010.1 63.571 420 114 4 84 503 114 494 0.0 538
Msa0322370 AT2G26190.2 76.838 272 63 0 91 362 126 397 4.12e-155 448
Msa0322370 AT3G13600.1 69.373 271 78 2 104 369 108 378 2.82e-139 415
Msa0322370 AT3G13600.1 50.562 89 40 2 416 504 517 601 3.59e-17 85.1
Msa0322370 AT3G13600.2 69.373 271 78 2 104 369 108 378 2.82e-139 415
Msa0322370 AT3G13600.2 50.562 89 40 2 416 504 517 601 3.59e-17 85.1
Msa0322370 AT4G33050.4 66.781 292 94 2 41 330 45 335 7.90e-134 391
Msa0322370 AT3G58480.1 59.502 321 125 2 104 419 98 418 3.57e-133 398
Msa0322370 AT3G52870.1 49.250 400 171 6 104 472 49 447 1.74e-130 387
Msa0322370 AT4G33050.1 59.091 330 94 3 41 330 45 373 4.48e-126 373
Msa0322370 AT4G33050.6 67.606 213 66 2 41 251 45 256 8.17e-95 288

Find 157 sgRNAs with CRISPR-Local

Find 246 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCACTTATATTATGATATT+TGG 0.113028 2_4:+24802381 Msa0322370:CDS
CTATTCTCTTGTAGTTCTTA+TGG 0.189651 2_4:+24804517 Msa0322370:three_prime_UTR
TATAAACTTTGCAGGCTATT+TGG 0.196615 2_4:+24803297 Msa0322370:intron
TCCTTTGTTGCTCACATTAT+TGG 0.207208 2_4:-24803820 None:intergenic
TTCATCAAACAAATTGAAAT+TGG 0.211861 2_4:+24801147 Msa0322370:five_prime_UTR
GATTCATTAGTTTCAATAAA+TGG 0.225018 2_4:-24803753 None:intergenic
CAAAATCATAGCACCATCTT+TGG 0.243712 2_4:-24801278 None:intergenic
ATAGATATTTGTTTGTGTTT+TGG 0.264992 2_4:+24804464 Msa0322370:three_prime_UTR
CAACACTCTAGCTTTCTATC+TGG 0.277196 2_4:+24802974 Msa0322370:CDS
ATTGTTAGGCATTCACTCTT+TGG 0.277775 2_4:+24801229 Msa0322370:CDS
ATACATTGTGTCTTAGTAAA+AGG 0.287560 2_4:-24804573 None:intergenic
CCCAAATGATTCATGGCCTT+GGG 0.291785 2_4:+24804602 Msa0322370:three_prime_UTR
CTTGGCCTTGGAGAAGGTAT+TGG 0.294044 2_4:-24804053 None:intergenic
TACTGGGACCTCAAATTTCT+TGG 0.295955 2_4:-24803874 None:intergenic
GTGTCAAGGGTCACATGTTC+TGG 0.297346 2_4:-24801373 None:intergenic
CTTCAATTCAACTATAGTTT+TGG 0.297565 2_4:+24801253 Msa0322370:CDS
CAAACAGGAATCGGAGTTCT+TGG 0.300650 2_4:-24804125 None:intergenic
CTCTTGGAAAAGTCAAATAC+TGG 0.311032 2_4:-24803891 None:intergenic
TTGGCCTTGGAGAAGGTATT+GGG 0.317413 2_4:-24804052 None:intergenic
TAATGAATCACAACAAACTA+TGG 0.319646 2_4:+24803767 Msa0322370:CDS
GCCCTTGATTGAAGATGTTC+AGG 0.324654 2_4:-24803972 None:intergenic
GAAGAGAAAACAACTTCTTT+AGG 0.325682 2_4:-24801445 None:intergenic
CGCCAGTGTATTAAATATCT+TGG 0.329440 2_4:+24802615 Msa0322370:CDS
CCCCAAGGCCATGAATCATT+TGG 0.331417 2_4:-24804603 None:intergenic
ACCCAAATGATTCATGGCCT+TGG 0.343369 2_4:+24804601 Msa0322370:three_prime_UTR
CTAGGAGAAATCCTAACTTT+TGG 0.346124 2_4:-24804077 None:intergenic
CTGTTGTTGTTGAGGAACTA+TGG 0.353192 2_4:+24801560 Msa0322370:CDS
TTCTCCTAGGCTTGCATACA+TGG 0.355214 2_4:+24804091 Msa0322370:CDS
GATGATGCACCTTCATTCAT+TGG 0.357552 2_4:+24803723 Msa0322370:CDS
AACACTCTAGCTTTCTATCT+GGG 0.360244 2_4:+24802975 Msa0322370:CDS
GGTGTGAATCTACATCTCTA+TGG 0.373439 2_4:+24801168 Msa0322370:exon
CTCTGAAGTTCTCTTCAGTT+GGG 0.374129 2_4:-24803340 None:intergenic
CAAAATCCCTAAAAGAATAA+AGG 0.385082 2_4:-24804434 None:intergenic
TGAGAACAAGTTTCAACAAA+AGG 0.385221 2_4:+24801299 Msa0322370:CDS
CAAGGCCAAGCCCAAAAGTT+AGG 0.392816 2_4:+24804066 Msa0322370:CDS
GGGGCCGCAACCACAGCTGC+TGG 0.395935 2_4:+24802995 Msa0322370:CDS
GGTATTGGGCCATAGCTATA+TGG 0.404459 2_4:-24804038 None:intergenic
TTCTTTACTATCATCAGCTT+GGG 0.405123 2_4:+24801201 Msa0322370:CDS
GGGTGATAATGACCACTATA+AGG 0.406891 2_4:-24803320 None:intergenic
ATATGAAGTAATTGTTGAAA+AGG 0.407093 2_4:+24802832 Msa0322370:CDS
CAGCTTGGGAAGAAATTGTT+AGG 0.416385 2_4:+24801215 Msa0322370:CDS
TCCAACGTTTGATATCTAAT+CGG 0.418531 2_4:-24804199 None:intergenic
CAGGAGCTGGACCTCGTATT+GGG 0.418667 2_4:+24803934 Msa0322370:CDS
ACAGGAGCTGGACCTCGTAT+TGG 0.428286 2_4:+24803933 Msa0322370:CDS
CCCAAGGCCATGAATCATTT+GGG 0.429337 2_4:-24804602 None:intergenic
ATTTAATACACTGGCGTTGA+AGG 0.430452 2_4:-24802608 None:intergenic
TAACTATTAGATGAATTCAA+TGG 0.432543 2_4:+24804252 Msa0322370:three_prime_UTR
GCTAAGAACAAATATCCATT+TGG 0.436044 2_4:-24802906 None:intergenic
ATTGACCCACGTCATCGTTA+TGG 0.436296 2_4:+24802350 Msa0322370:CDS
CCAACGTTTGATATCTAATC+GGG 0.437307 2_4:-24804198 None:intergenic
CATAAGAACTACAAGAGAAT+AGG 0.442565 2_4:-24804516 None:intergenic
TCATTCACCCAAATGATTCA+TGG 0.443011 2_4:+24804595 Msa0322370:three_prime_UTR
AATTGTTGAAAAGGGAAAGT+TGG 0.444544 2_4:+24802841 Msa0322370:CDS
TGTTATAATTGCAGAAAGAA+AGG 0.444730 2_4:+24802804 Msa0322370:intron
CATCGATACTCGCCTCAAAC+AGG 0.451169 2_4:-24804140 None:intergenic
TCTCTGAAGTTCTCTTCAGT+TGG 0.451697 2_4:-24803341 None:intergenic
CCACTTGCATGATAATCTCT+TGG 0.452364 2_4:-24803907 None:intergenic
ATTAGTTTCAATAAATGGAT+TGG 0.452855 2_4:-24803748 None:intergenic
TATGAAGTAATTGTTGAAAA+GGG 0.453381 2_4:+24802833 Msa0322370:CDS
AGGCGAGTATCGATGGAACT+AGG 0.456657 2_4:+24804148 Msa0322370:exon
GCTTGATGCTGCAGCAACTA+AGG 0.459781 2_4:+24801486 Msa0322370:CDS
GTATGTTGGAAGGAAACAAA+AGG 0.459878 2_4:+24802943 Msa0322370:CDS
TTTCTTTACTATCATCAGCT+TGG 0.460682 2_4:+24801200 Msa0322370:CDS
GGCAAGGACAAGAGCAGCTA+AGG 0.461504 2_4:+24802023 Msa0322370:CDS
TTATCATGCAAGTGGTCTAC+AGG 0.465259 2_4:+24803915 Msa0322370:CDS
ATTGATTGAGAAGTTTGAGT+AGG 0.469055 2_4:-24803792 None:intergenic
ATGATGCACCTTCATTCATT+GGG 0.470656 2_4:+24803724 Msa0322370:CDS
AGAACTCCGATTCCTGTTTG+AGG 0.470775 2_4:+24804128 Msa0322370:CDS
TTCATCAACATTTGTGTCAA+GGG 0.472131 2_4:-24801386 None:intergenic
TACTCGCCTCAAACAGGAAT+CGG 0.474532 2_4:-24804134 None:intergenic
TTCATAAACATTGTCAGCTA+AGG 0.481134 2_4:+24804308 Msa0322370:three_prime_UTR
AAACAGGAATCGGAGTTCTT+GGG 0.487903 2_4:-24804124 None:intergenic
AAGTTGGTGTATAGAAAAGA+TGG 0.490138 2_4:+24802857 Msa0322370:CDS
ATCCTGAACATCTTCAATCA+AGG 0.491258 2_4:+24803970 Msa0322370:CDS
TGCAAGTGGTCTACAGGAGC+TGG 0.491741 2_4:+24803921 Msa0322370:CDS
CTGCAGTGTCAAGGTGGGGA+AGG 0.491928 2_4:+24802001 Msa0322370:CDS
CAGCTTCAAGCCAATGTTGG+AGG 0.493190 2_4:-24802210 None:intergenic
TGAATTGAGGATAACACAAC+TGG 0.493674 2_4:+24804338 Msa0322370:three_prime_UTR
TCTCCTAGGCTTGCATACAT+GGG 0.497392 2_4:+24804092 Msa0322370:CDS
GAGAACAAGTTTCAACAAAA+GGG 0.499003 2_4:+24801300 Msa0322370:CDS
TGGCGTTGAAGGGTGGCCCT+TGG 0.499783 2_4:-24802597 None:intergenic
TTTGGGCTTGGCCTTGGAGA+AGG 0.500804 2_4:-24804059 None:intergenic
TAGAAAAGATGGGAAGTTTG+TGG 0.502062 2_4:+24802868 Msa0322370:CDS
CACTAATCTTCCAGCAGCTG+TGG 0.502889 2_4:-24803005 None:intergenic
CAAAAGTTAGGATTTCTCCT+AGG 0.503091 2_4:+24804078 Msa0322370:CDS
CACAGCTGCTGGAAGATTAG+TGG 0.503574 2_4:+24803006 Msa0322370:CDS
GTTATAATTGCAGAAAGAAA+GGG 0.503902 2_4:+24802805 Msa0322370:intron
CAGGCTATTTGGCCTTATAG+TGG 0.505306 2_4:+24803308 Msa0322370:intron
TTTCATCAACATTTGTGTCA+AGG 0.505431 2_4:-24801387 None:intergenic
GGTCTTGCAGAAGCAGGTCT+AGG 0.511439 2_4:-24804017 None:intergenic
ACCACTAGGGCTTTGTATGT+TGG 0.515347 2_4:+24802929 Msa0322370:CDS
TGATGAAAACTTGAAACATA+AGG 0.518550 2_4:+24801402 Msa0322370:CDS
CTATATGGTCTTGCAGAAGC+AGG 0.519094 2_4:-24804023 None:intergenic
GGTTAATGCCAAGAAATTTG+AGG 0.520668 2_4:+24803866 Msa0322370:CDS
CTGTTTGAGGCGAGTATCGA+TGG 0.520765 2_4:+24804141 Msa0322370:exon
ACCAATAATGTGAGCAACAA+AGG 0.523579 2_4:+24803819 Msa0322370:CDS
ACATCTTCAATCAAGGGCAT+TGG 0.526183 2_4:+24803977 Msa0322370:CDS
AGAATTTGTTAGCTTTCTTG+AGG 0.528950 2_4:+24803361 Msa0322370:CDS
AGACTGATGAAAAGTCCAAA+TGG 0.530334 2_4:+24802891 Msa0322370:CDS
TTGATTGAGAAGTTTGAGTA+GGG 0.533972 2_4:-24803791 None:intergenic
CTTCATAAGTTCAACAACAA+AGG 0.536338 2_4:+24800833 Msa0322370:five_prime_UTR
GTGTGAATCTACATCTCTAT+GGG 0.537392 2_4:+24801169 Msa0322370:exon
TTACAGCTTCAAGCCAATGT+TGG 0.537705 2_4:-24802213 None:intergenic
GGAATCGGAGTTCTTGGGCT+AGG 0.537727 2_4:-24804119 None:intergenic
TGATTGTGCTGTTGTTGTTG+AGG 0.543569 2_4:+24801552 Msa0322370:CDS
CTAAGGTGACACTTGAATTG+AGG 0.545081 2_4:+24804325 Msa0322370:three_prime_UTR
CCAAGAGATTATCATGCAAG+TGG 0.547249 2_4:+24803907 Msa0322370:CDS
TGTAGGTTGGATGTTGGAGA+TGG 0.548321 2_4:+24802549 Msa0322370:intron
TCTTCCAGCAGCTGTGGTTG+CGG 0.548897 2_4:-24802999 None:intergenic
TATTTGTTCTTAGCACCACT+AGG 0.553975 2_4:+24802915 Msa0322370:CDS
CCAAATGATTCATGGCCTTG+GGG 0.557085 2_4:+24804603 Msa0322370:three_prime_UTR
TGGCCTCTGACGACTGAAGT+AGG 0.564208 2_4:+24804276 Msa0322370:three_prime_UTR
AGCTTCAAGCCAATGTTGGA+GGG 0.566073 2_4:-24802209 None:intergenic
TGTCAAGGTGGGGAAGGGCA+AGG 0.566651 2_4:+24802007 Msa0322370:CDS
CTAGGGCTTTGTATGTTGGA+AGG 0.566948 2_4:+24802933 Msa0322370:CDS
GATATGAAGGTGGAAAGCAT+TGG 0.567332 2_4:+24801921 Msa0322370:intron
TGCAGTGTCAAGGTGGGGAA+GGG 0.568513 2_4:+24802002 Msa0322370:CDS
AGAAACTGCAGTGTCAAGGT+GGG 0.571406 2_4:+24801996 Msa0322370:CDS
CTCCTAGGCTTGCATACATG+GGG 0.573009 2_4:+24804093 Msa0322370:CDS
CAAACGTTGGATTCATCGAA+TGG 0.573121 2_4:+24804211 Msa0322370:three_prime_UTR
TTTAATACACTGGCGTTGAA+GGG 0.577273 2_4:-24802607 None:intergenic
CTTTCTTGAGGAGCACAAAG+TGG 0.581632 2_4:+24803373 Msa0322370:CDS
GTCCAAGATATTTAATACAC+TGG 0.581744 2_4:-24802617 None:intergenic
TCCTGAACATCTTCAATCAA+GGG 0.582807 2_4:+24803971 Msa0322370:CDS
AGTTGGTGTATAGAAAAGAT+GGG 0.583418 2_4:+24802858 Msa0322370:CDS
TATGTTGGAAGGAAACAAAA+GGG 0.583609 2_4:+24802944 Msa0322370:CDS
TCTGCAAGACCATATAGCTA+TGG 0.585307 2_4:+24804029 Msa0322370:CDS
AACAAGAAACTGCAGTGTCA+AGG 0.588506 2_4:+24801992 Msa0322370:CDS
GGCGAGTATCGATGGAACTA+GGG 0.588778 2_4:+24804149 Msa0322370:three_prime_UTR
ATTTGTTCTTAGCACCACTA+GGG 0.589990 2_4:+24802916 Msa0322370:CDS
CAAAATTAATAATGCAACAG+AGG 0.596595 2_4:+24803845 Msa0322370:CDS
TCGGGGAGAATCTAGTGCAT+AGG 0.598685 2_4:-24804180 None:intergenic
TATTAGATGAATTCAATGGA+TGG 0.601301 2_4:+24804256 Msa0322370:three_prime_UTR
AATACACTGGCGTTGAAGGG+TGG 0.604577 2_4:-24802604 None:intergenic
AAGAAACTGCAGTGTCAAGG+TGG 0.608522 2_4:+24801995 Msa0322370:CDS
ACACTCTAGCTTTCTATCTG+GGG 0.613665 2_4:+24802976 Msa0322370:CDS
AACCCCATGTATGCAAGCCT+AGG 0.613919 2_4:-24804095 None:intergenic
GGTTGGAAAAGGTTTGTCCA+AGG 0.616819 2_4:+24802165 Msa0322370:intron
TCTTGGAAAAGTCAAATACT+GGG 0.619503 2_4:-24803890 None:intergenic
CCCGATTAGATATCAAACGT+TGG 0.620050 2_4:+24804198 Msa0322370:three_prime_UTR
TTAATCTTGAGAAATGTCCA+AGG 0.620162 2_4:+24802580 Msa0322370:CDS
TTGTGTCCATAACGATGACG+TGG 0.625718 2_4:-24802356 None:intergenic
TCTTTAGGCAAAGAAAGCAA+AGG 0.627914 2_4:-24801430 None:intergenic
TCTCCTACTTCAGTCGTCAG+AGG 0.629647 2_4:-24804279 None:intergenic
GGATTGGTCCCAATGAATGA+AGG 0.630179 2_4:-24803732 None:intergenic
AGTGGACCTCTCTAATGTCA+AGG 0.638394 2_4:+24803391 Msa0322370:CDS
AATTCACCTTGACATTAGAG+AGG 0.640988 2_4:-24803397 None:intergenic
GAAACTGCAGTGTCAAGGTG+GGG 0.643986 2_4:+24801997 Msa0322370:CDS
GGAAGATTAGTGGCACAACA+AGG 0.648672 2_4:+24803016 Msa0322370:CDS
ATGGCCCAATACCTTCTCCA+AGG 0.649248 2_4:+24804048 Msa0322370:CDS
TAATCTTGAGAAATGTCCAA+GGG 0.659144 2_4:+24802581 Msa0322370:CDS
TCTGACGACTGAAGTAGGAG+AGG 0.661874 2_4:+24804281 Msa0322370:three_prime_UTR
TCCAACATACAAAGCCCTAG+TGG 0.663510 2_4:-24802930 None:intergenic
GGCACAACAAGGTGTACTCG+AGG 0.687576 2_4:+24803027 Msa0322370:CDS
TCACGCACACACCCAATACG+AGG 0.694431 2_4:-24803945 None:intergenic
CAACGTTTGATATCTAATCG+GGG 0.704452 2_4:-24804197 None:intergenic
TGTGTCCATAACGATGACGT+GGG 0.727054 2_4:-24802355 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAATTTATAATATTATATT+AGG - chr2_4:24802248-24802267 None:intergenic 0.0%
!!! ATTATTTATTATTTTATTTT+TGG + chr2_4:24804392-24804411 Msa0322370:three_prime_UTR 0.0%
!!! TTATTTATTATTTTATTTTT+GGG + chr2_4:24804393-24804412 Msa0322370:three_prime_UTR 0.0%
!!! ATTTTTTCTTATATTCTTTT+TGG + chr2_4:24800888-24800907 Msa0322370:intron 10.0%
!! TGAACAAAAAAAAAATATTA+AGG + chr2_4:24800972-24800991 Msa0322370:intron 10.0%
!! AAATTATAATCTTGAAATTA+AGG - chr2_4:24801823-24801842 None:intergenic 10.0%
!! AAATTAAATTGAATTTCAAA+TGG - chr2_4:24802055-24802074 None:intergenic 10.0%
!!! TATTTTTCATTTCATTTTTA+AGG + chr2_4:24802099-24802118 Msa0322370:intron 10.0%
!!! TTATTTTTTATTTTTCATAC+AGG + chr2_4:24802144-24802163 Msa0322370:intron 10.0%
!!! TTTTAAATCACTTATGAAAT+AGG - chr2_4:24801013-24801032 None:intergenic 15.0%
!!! TATACGAATTTTGATAATTT+TGG + chr2_4:24801658-24801677 Msa0322370:intron 15.0%
!!! AATTGAAAATTTTCAATCAT+CGG + chr2_4:24801718-24801737 Msa0322370:intron 15.0%
!!! TATAATTTTAGAGAGTAAAT+TGG + chr2_4:24801835-24801854 Msa0322370:intron 15.0%
!! ATAATAAGACATATATGATT+AGG - chr2_4:24802463-24802482 None:intergenic 15.0%
!! ATTAGATTATATACTATGAT+CGG - chr2_4:24802772-24802791 None:intergenic 15.0%
!!! ATTATTTTATTTTTGGGTTT+TGG + chr2_4:24804399-24804418 Msa0322370:three_prime_UTR 15.0%
!!! ATTATTCCTTTATTCTTTTA+GGG + chr2_4:24804428-24804447 Msa0322370:three_prime_UTR 15.0%
!!! ATTCTATTGTTTTTTTTAAG+AGG + chr2_4:24804492-24804511 Msa0322370:three_prime_UTR 15.0%
!! AAAATTTCATTGAAAGCAAA+GGG - chr2_4:24800873-24800892 None:intergenic 20.0%
!! AAAAATTTCATTGAAAGCAA+AGG - chr2_4:24800874-24800893 None:intergenic 20.0%
!!! CAAAAAATTTGACTTATGTA+TGG + chr2_4:24801063-24801082 Msa0322370:intron 20.0%
!! TTCATCAAACAAATTGAAAT+TGG + chr2_4:24801147-24801166 Msa0322370:five_prime_UTR 20.0%
!! ATATTGTCCTAAAAAAACTT+AGG + chr2_4:24801756-24801775 Msa0322370:intron 20.0%
!! AATAACATACAAAAACCATA+AGG - chr2_4:24801882-24801901 None:intergenic 20.0%
!!! GGTTTTTGTATGTTATTAAA+TGG + chr2_4:24801885-24801904 Msa0322370:intron 20.0%
!! TTTGTATGTTATTAAATGGA+TGG + chr2_4:24801889-24801908 Msa0322370:intron 20.0%
!!! ATGGTTTTTAAATGATATGA+AGG + chr2_4:24801908-24801927 Msa0322370:intron 20.0%
!!! TTTTTATTTTTCATACAGGT+TGG + chr2_4:24802148-24802167 Msa0322370:intron 20.0%
!! TGCACTTATATTATGATATT+TGG + chr2_4:24802381-24802400 Msa0322370:CDS 20.0%
!!! ATTGAATCTGATAATTTTGA+TGG + chr2_4:24802517-24802536 Msa0322370:intron 20.0%
!!! ATATTCTATTGATAACTTAC+TGG - chr2_4:24802642-24802661 None:intergenic 20.0%
!! TATGAATATTATAAACCCTA+CGG - chr2_4:24802719-24802738 None:intergenic 20.0%
!! TTAGATTATATACTATGATC+GGG - chr2_4:24802771-24802790 None:intergenic 20.0%
!! ATATGAAGTAATTGTTGAAA+AGG + chr2_4:24802832-24802851 Msa0322370:CDS 20.0%
!! TATGAAGTAATTGTTGAAAA+GGG + chr2_4:24802833-24802852 Msa0322370:CDS 20.0%
!! TGTAATATAATGAAAACACA+TGG - chr2_4:24803226-24803245 None:intergenic 20.0%
!! AACCTAAATCAAAAAGATTT+GGG - chr2_4:24803587-24803606 None:intergenic 20.0%
!! AAACCTAAATCAAAAAGATT+TGG - chr2_4:24803588-24803607 None:intergenic 20.0%
!! TAGTGAACAAAAAAGTAAAT+TGG + chr2_4:24803640-24803659 Msa0322370:intron 20.0%
!!! ATTAGTTTCAATAAATGGAT+TGG - chr2_4:24803751-24803770 None:intergenic 20.0%
!!! GATTCATTAGTTTCAATAAA+TGG - chr2_4:24803756-24803775 None:intergenic 20.0%
!! TAACTATTAGATGAATTCAA+TGG + chr2_4:24804252-24804271 Msa0322370:three_prime_UTR 20.0%
!!! GATTATTCCTTTATTCTTTT+AGG + chr2_4:24804427-24804446 Msa0322370:three_prime_UTR 20.0%
!!! ATAGATATTTGTTTGTGTTT+TGG + chr2_4:24804464-24804483 Msa0322370:three_prime_UTR 20.0%
!!! ATGTTTTATTTCCTTCAAAA+AGG - chr2_4:24804545-24804564 None:intergenic 20.0%
! ATGTATGGTTTGATTAATGA+TGG + chr2_4:24801078-24801097 Msa0322370:intron 25.0%
! GGTTTATATGTAATTTGAAC+AGG + chr2_4:24801099-24801118 Msa0322370:intron 25.0%
!! CTTCAATTCAACTATAGTTT+TGG + chr2_4:24801253-24801272 Msa0322370:CDS 25.0%
!!! TCTAACCTAGTTGAATTTTT+TGG - chr2_4:24801343-24801362 None:intergenic 25.0%
! AAAAAATTCAACTAGGTTAG+AGG + chr2_4:24801342-24801361 Msa0322370:CDS 25.0%
! TGATGAAAACTTGAAACATA+AGG + chr2_4:24801402-24801421 Msa0322370:CDS 25.0%
!!! TCTATCACCTAAGTTTTTTT+AGG - chr2_4:24801766-24801785 None:intergenic 25.0%
!!! GTATTAATTTCTTAGCCTTA+TGG + chr2_4:24801864-24801883 Msa0322370:intron 25.0%
!! GTTTTTAAATGATATGAAGG+TGG + chr2_4:24801911-24801930 Msa0322370:intron 25.0%
! AAAGCTTACCAATAGAAAAA+TGG - chr2_4:24802428-24802447 None:intergenic 25.0%
!! ATTGGTAAGCTTTTATTCTA+TGG + chr2_4:24802435-24802454 Msa0322370:intron 25.0%
!!! TTTGATGGTTAACTTTTTGT+AGG + chr2_4:24802532-24802551 Msa0322370:intron 25.0%
! ATTGAAGTATATATCGAACT+CGG + chr2_4:24802691-24802710 Msa0322370:intron 25.0%
! TGTTATAATTGCAGAAAGAA+AGG + chr2_4:24802804-24802823 Msa0322370:intron 25.0%
! GTTATAATTGCAGAAAGAAA+GGG + chr2_4:24802805-24802824 Msa0322370:intron 25.0%
! ATTCAGGTCAATTAAAAAGA+TGG - chr2_4:24803066-24803085 None:intergenic 25.0%
! GTTTATTGTATAAACTTTGC+AGG + chr2_4:24803289-24803308 Msa0322370:intron 25.0%
! TTTGTTCACTAGTATTAGTT+AGG - chr2_4:24803631-24803650 None:intergenic 25.0%
! TAATGAATCACAACAAACTA+TGG + chr2_4:24803767-24803786 Msa0322370:CDS 25.0%
! CAAAATTAATAATGCAACAG+AGG + chr2_4:24803845-24803864 Msa0322370:CDS 25.0%
! TATTAGATGAATTCAATGGA+TGG + chr2_4:24804256-24804275 Msa0322370:three_prime_UTR 25.0%
! CAAAATCCCTAAAAGAATAA+AGG - chr2_4:24804437-24804456 None:intergenic 25.0%
!!! CTTTATTCTTTTAGGGATTT+TGG + chr2_4:24804435-24804454 Msa0322370:three_prime_UTR 25.0%
! ATACATTGTGTCTTAGTAAA+AGG - chr2_4:24804576-24804595 None:intergenic 25.0%
CTTCATAAGTTCAACAACAA+AGG + chr2_4:24800833-24800852 Msa0322370:five_prime_UTR 30.0%
CACTTATGAAATAGGACAAT+TGG - chr2_4:24801005-24801024 None:intergenic 30.0%
TTTCTTTACTATCATCAGCT+TGG + chr2_4:24801200-24801219 Msa0322370:CDS 30.0%
TTCTTTACTATCATCAGCTT+GGG + chr2_4:24801201-24801220 Msa0322370:CDS 30.0%
!!! TATAGTTTTGGTTCCAAAGA+TGG + chr2_4:24801265-24801284 Msa0322370:CDS 30.0%
TGAGAACAAGTTTCAACAAA+AGG + chr2_4:24801299-24801318 Msa0322370:CDS 30.0%
GAGAACAAGTTTCAACAAAA+GGG + chr2_4:24801300-24801319 Msa0322370:CDS 30.0%
CAACACCAAAAAATTCAACT+AGG + chr2_4:24801335-24801354 Msa0322370:CDS 30.0%
TTCATCAACATTTGTGTCAA+GGG - chr2_4:24801389-24801408 None:intergenic 30.0%
TTTCATCAACATTTGTGTCA+AGG - chr2_4:24801390-24801409 None:intergenic 30.0%
GAAGAGAAAACAACTTCTTT+AGG - chr2_4:24801448-24801467 None:intergenic 30.0%
!! TTTTTCATACAGGTTGGAAA+AGG + chr2_4:24802154-24802173 Msa0322370:intron 30.0%
AGAAAAATGGTTGAGTACTT+TGG - chr2_4:24802415-24802434 None:intergenic 30.0%
!! GTACTCAACCATTTTTCTAT+TGG + chr2_4:24802417-24802436 Msa0322370:CDS 30.0%
! ATGGTTAACTTTTTGTAGGT+TGG + chr2_4:24802536-24802555 Msa0322370:intron 30.0%
TTAATCTTGAGAAATGTCCA+AGG + chr2_4:24802580-24802599 Msa0322370:CDS 30.0%
TAATCTTGAGAAATGTCCAA+GGG + chr2_4:24802581-24802600 Msa0322370:CDS 30.0%
GTCCAAGATATTTAATACAC+TGG - chr2_4:24802620-24802639 None:intergenic 30.0%
AATTGTTGAAAAGGGAAAGT+TGG + chr2_4:24802841-24802860 Msa0322370:CDS 30.0%
!! AAGTTGGTGTATAGAAAAGA+TGG + chr2_4:24802857-24802876 Msa0322370:CDS 30.0%
! AGTTGGTGTATAGAAAAGAT+GGG + chr2_4:24802858-24802877 Msa0322370:CDS 30.0%
GCTAAGAACAAATATCCATT+TGG - chr2_4:24802909-24802928 None:intergenic 30.0%
TATGTTGGAAGGAAACAAAA+GGG + chr2_4:24802944-24802963 Msa0322370:CDS 30.0%
TTTACAACTTCAACGAATTC+AGG - chr2_4:24803082-24803101 None:intergenic 30.0%
AAGTTGTAAATCTTAACCGT+TGG + chr2_4:24803092-24803111 Msa0322370:intron 30.0%
TATAAACTTTGCAGGCTATT+TGG + chr2_4:24803297-24803316 Msa0322370:intron 30.0%
!! AGAATTTGTTAGCTTTCTTG+AGG + chr2_4:24803361-24803380 Msa0322370:CDS 30.0%
!!! TGCCCAAATCTTTTTGATTT+AGG + chr2_4:24803582-24803601 Msa0322370:intron 30.0%
! ATAGCATATCTCTGAAAAGA+GGG - chr2_4:24803699-24803718 None:intergenic 30.0%
! TATAGCATATCTCTGAAAAG+AGG - chr2_4:24803700-24803719 None:intergenic 30.0%
TTGATTGAGAAGTTTGAGTA+GGG - chr2_4:24803794-24803813 None:intergenic 30.0%
ATTGATTGAGAAGTTTGAGT+AGG - chr2_4:24803795-24803814 None:intergenic 30.0%
TCTTGGAAAAGTCAAATACT+GGG - chr2_4:24803893-24803912 None:intergenic 30.0%
! TAGGAGAAATCCTAACTTTT+GGG - chr2_4:24804079-24804098 None:intergenic 30.0%
TCCAACGTTTGATATCTAAT+CGG - chr2_4:24804202-24804221 None:intergenic 30.0%
TTCATAAACATTGTCAGCTA+AGG + chr2_4:24804308-24804327 Msa0322370:three_prime_UTR 30.0%
CATAAGAACTACAAGAGAAT+AGG - chr2_4:24804519-24804538 None:intergenic 30.0%
CTATTCTCTTGTAGTTCTTA+TGG + chr2_4:24804517-24804536 Msa0322370:three_prime_UTR 30.0%
! TTCTTATGGAACCTTTTTGA+AGG + chr2_4:24804531-24804550 Msa0322370:three_prime_UTR 30.0%
GTGTGAATCTACATCTCTAT+GGG + chr2_4:24801169-24801188 Msa0322370:exon 35.0%
ATTGTTAGGCATTCACTCTT+TGG + chr2_4:24801229-24801248 Msa0322370:CDS 35.0%
CAAAATCATAGCACCATCTT+TGG - chr2_4:24801281-24801300 None:intergenic 35.0%
TCTTTAGGCAAAGAAAGCAA+AGG - chr2_4:24801433-24801452 None:intergenic 35.0%
! TCAAGCTCAAAAACAGGTTT+TGG - chr2_4:24801472-24801491 None:intergenic 35.0%
! TTTTTGTGCTTTGTCATCCT+TGG - chr2_4:24802185-24802204 None:intergenic 35.0%
AAAAATTAGCCCTCCAACAT+TGG + chr2_4:24802200-24802219 Msa0322370:CDS 35.0%
!! ACTTTTTGTAGGTTGGATGT+TGG + chr2_4:24802543-24802562 Msa0322370:intron 35.0%
! TTTAATACACTGGCGTTGAA+GGG - chr2_4:24802610-24802629 None:intergenic 35.0%
! ATTTAATACACTGGCGTTGA+AGG - chr2_4:24802611-24802630 None:intergenic 35.0%
CGCCAGTGTATTAAATATCT+TGG + chr2_4:24802615-24802634 Msa0322370:CDS 35.0%
TAGAAAAGATGGGAAGTTTG+TGG + chr2_4:24802868-24802887 Msa0322370:CDS 35.0%
AGACTGATGAAAAGTCCAAA+TGG + chr2_4:24802891-24802910 Msa0322370:CDS 35.0%
TATTTGTTCTTAGCACCACT+AGG + chr2_4:24802915-24802934 Msa0322370:CDS 35.0%
ATTTGTTCTTAGCACCACTA+GGG + chr2_4:24802916-24802935 Msa0322370:CDS 35.0%
GTATGTTGGAAGGAAACAAA+AGG + chr2_4:24802943-24802962 Msa0322370:CDS 35.0%
!! AACACTCTAGCTTTCTATCT+GGG + chr2_4:24802975-24802994 Msa0322370:CDS 35.0%
ATCATCTGATTGTCATCCAA+CGG - chr2_4:24803111-24803130 None:intergenic 35.0%
AATTCACCTTGACATTAGAG+AGG - chr2_4:24803400-24803419 None:intergenic 35.0%
ACTAACGAGAAACTCTTACT+TGG + chr2_4:24803428-24803447 Msa0322370:intron 35.0%
AAACCCAACACCTCATATTT+AGG + chr2_4:24803455-24803474 Msa0322370:intron 35.0%
ATGATGCACCTTCATTCATT+GGG + chr2_4:24803724-24803743 Msa0322370:CDS 35.0%
ACCAATAATGTGAGCAACAA+AGG + chr2_4:24803819-24803838 Msa0322370:CDS 35.0%
TCCTTTGTTGCTCACATTAT+TGG - chr2_4:24803823-24803842 None:intergenic 35.0%
GGTTAATGCCAAGAAATTTG+AGG + chr2_4:24803866-24803885 Msa0322370:CDS 35.0%
CTCTTGGAAAAGTCAAATAC+TGG - chr2_4:24803894-24803913 None:intergenic 35.0%
ATCCTGAACATCTTCAATCA+AGG + chr2_4:24803970-24803989 Msa0322370:CDS 35.0%
TCCTGAACATCTTCAATCAA+GGG + chr2_4:24803971-24803990 Msa0322370:CDS 35.0%
! CTAGGAGAAATCCTAACTTT+TGG - chr2_4:24804080-24804099 None:intergenic 35.0%
CAAAAGTTAGGATTTCTCCT+AGG + chr2_4:24804078-24804097 Msa0322370:CDS 35.0%
CAACGTTTGATATCTAATCG+GGG - chr2_4:24804200-24804219 None:intergenic 35.0%
CCAACGTTTGATATCTAATC+GGG - chr2_4:24804201-24804220 None:intergenic 35.0%
TGAATTGAGGATAACACAAC+TGG + chr2_4:24804338-24804357 Msa0322370:three_prime_UTR 35.0%
TCATTCACCCAAATGATTCA+TGG + chr2_4:24804595-24804614 Msa0322370:three_prime_UTR 35.0%
GGTGTGAATCTACATCTCTA+TGG + chr2_4:24801168-24801187 Msa0322370:exon 40.0%
CAGCTTGGGAAGAAATTGTT+AGG + chr2_4:24801215-24801234 Msa0322370:CDS 40.0%
! TGATTGTGCTGTTGTTGTTG+AGG + chr2_4:24801552-24801571 Msa0322370:CDS 40.0%
! CTGTTGTTGTTGAGGAACTA+TGG + chr2_4:24801560-24801579 Msa0322370:CDS 40.0%
! GATATGAAGGTGGAAAGCAT+TGG + chr2_4:24801921-24801940 Msa0322370:intron 40.0%
AACAAGAAACTGCAGTGTCA+AGG + chr2_4:24801992-24802011 Msa0322370:CDS 40.0%
TTACAGCTTCAAGCCAATGT+TGG - chr2_4:24802216-24802235 None:intergenic 40.0%
!! CAACACTCTAGCTTTCTATC+TGG + chr2_4:24802974-24802993 Msa0322370:CDS 40.0%
!! ACACTCTAGCTTTCTATCTG+GGG + chr2_4:24802976-24802995 Msa0322370:CDS 40.0%
ATTGTCCGACCTTTATCTGA+CGG + chr2_4:24803182-24803201 Msa0322370:intron 40.0%
GAATCTTGACCGTCAGATAA+AGG - chr2_4:24803194-24803213 None:intergenic 40.0%
! GGGTGATAATGACCACTATA+AGG - chr2_4:24803323-24803342 None:intergenic 40.0%
!! CTCTGAAGTTCTCTTCAGTT+GGG - chr2_4:24803343-24803362 None:intergenic 40.0%
!! TCTCTGAAGTTCTCTTCAGT+TGG - chr2_4:24803344-24803363 None:intergenic 40.0%
! GTGCCTAAATATGAGGTGTT+GGG - chr2_4:24803461-24803480 None:intergenic 40.0%
TGTGCCTAAATATGAGGTGT+TGG - chr2_4:24803462-24803481 None:intergenic 40.0%
TGTGAGTGTGCCTAAATATG+AGG - chr2_4:24803468-24803487 None:intergenic 40.0%
TTGGGCACACTCACATAAAA+TGG - chr2_4:24803569-24803588 None:intergenic 40.0%
GATGATGCACCTTCATTCAT+TGG + chr2_4:24803723-24803742 Msa0322370:CDS 40.0%
TACTGGGACCTCAAATTTCT+TGG - chr2_4:24803877-24803896 None:intergenic 40.0%
CCACTTGCATGATAATCTCT+TGG - chr2_4:24803910-24803929 None:intergenic 40.0%
CCAAGAGATTATCATGCAAG+TGG + chr2_4:24803907-24803926 Msa0322370:CDS 40.0%
TTATCATGCAAGTGGTCTAC+AGG + chr2_4:24803915-24803934 Msa0322370:CDS 40.0%
! ACATCTTCAATCAAGGGCAT+TGG + chr2_4:24803977-24803996 Msa0322370:CDS 40.0%
TCTGCAAGACCATATAGCTA+TGG + chr2_4:24804029-24804048 Msa0322370:CDS 40.0%
! GAAATCCTAACTTTTGGGCT+TGG - chr2_4:24804074-24804093 None:intergenic 40.0%
AAACAGGAATCGGAGTTCTT+GGG - chr2_4:24804127-24804146 None:intergenic 40.0%
CCCGATTAGATATCAAACGT+TGG + chr2_4:24804198-24804217 Msa0322370:three_prime_UTR 40.0%
CAAACGTTGGATTCATCGAA+TGG + chr2_4:24804211-24804230 Msa0322370:three_prime_UTR 40.0%
CTAAGGTGACACTTGAATTG+AGG + chr2_4:24804325-24804344 Msa0322370:three_prime_UTR 40.0%
GCAGCATCAAGCTCAAAAAC+AGG - chr2_4:24801478-24801497 None:intergenic 45.0%
AAGAAACTGCAGTGTCAAGG+TGG + chr2_4:24801995-24802014 Msa0322370:CDS 45.0%
AGAAACTGCAGTGTCAAGGT+GGG + chr2_4:24801996-24802015 Msa0322370:CDS 45.0%
GGTTGGAAAAGGTTTGTCCA+AGG + chr2_4:24802165-24802184 Msa0322370:intron 45.0%
AGCTTCAAGCCAATGTTGGA+GGG - chr2_4:24802212-24802231 None:intergenic 45.0%
ATTGACCCACGTCATCGTTA+TGG + chr2_4:24802350-24802369 Msa0322370:CDS 45.0%
TGTGTCCATAACGATGACGT+GGG - chr2_4:24802358-24802377 None:intergenic 45.0%
TTGTGTCCATAACGATGACG+TGG - chr2_4:24802359-24802378 None:intergenic 45.0%
! TGTAGGTTGGATGTTGGAGA+TGG + chr2_4:24802549-24802568 Msa0322370:intron 45.0%
TATATCGAACTCGGTACCGT+AGG + chr2_4:24802700-24802719 Msa0322370:intron 45.0%
ATATCGAACTCGGTACCGTA+GGG + chr2_4:24802701-24802720 Msa0322370:intron 45.0%
ATGATCGGGTCTAATGCATG+TGG - chr2_4:24802757-24802776 None:intergenic 45.0%
! ACCACTAGGGCTTTGTATGT+TGG + chr2_4:24802929-24802948 Msa0322370:CDS 45.0%
TCCAACATACAAAGCCCTAG+TGG - chr2_4:24802933-24802952 None:intergenic 45.0%
! CTAGGGCTTTGTATGTTGGA+AGG + chr2_4:24802933-24802952 Msa0322370:CDS 45.0%
GGAAGATTAGTGGCACAACA+AGG + chr2_4:24803016-24803035 Msa0322370:CDS 45.0%
CTTGACCGTCAGATAAAGGT+CGG - chr2_4:24803190-24803209 None:intergenic 45.0%
!! CAGGCTATTTGGCCTTATAG+TGG + chr2_4:24803308-24803327 Msa0322370:intron 45.0%
! CTTTCTTGAGGAGCACAAAG+TGG + chr2_4:24803373-24803392 Msa0322370:CDS 45.0%
AGTGGACCTCTCTAATGTCA+AGG + chr2_4:24803391-24803410 Msa0322370:CDS 45.0%
!! GGATTGGTCCCAATGAATGA+AGG - chr2_4:24803735-24803754 None:intergenic 45.0%
GCCCTTGATTGAAGATGTTC+AGG - chr2_4:24803975-24803994 None:intergenic 45.0%
! CTATATGGTCTTGCAGAAGC+AGG - chr2_4:24804026-24804045 None:intergenic 45.0%
! GGTATTGGGCCATAGCTATA+TGG - chr2_4:24804041-24804060 None:intergenic 45.0%
!! TTGGCCTTGGAGAAGGTATT+GGG - chr2_4:24804055-24804074 None:intergenic 45.0%
TTCTCCTAGGCTTGCATACA+TGG + chr2_4:24804091-24804110 Msa0322370:CDS 45.0%
TCTCCTAGGCTTGCATACAT+GGG + chr2_4:24804092-24804111 Msa0322370:CDS 45.0%
CAAACAGGAATCGGAGTTCT+TGG - chr2_4:24804128-24804147 None:intergenic 45.0%
AGAACTCCGATTCCTGTTTG+AGG + chr2_4:24804128-24804147 Msa0322370:CDS 45.0%
TACTCGCCTCAAACAGGAAT+CGG - chr2_4:24804137-24804156 None:intergenic 45.0%
ACCCAAATGATTCATGGCCT+TGG + chr2_4:24804601-24804620 Msa0322370:three_prime_UTR 45.0%
CCCAAGGCCATGAATCATTT+GGG - chr2_4:24804605-24804624 None:intergenic 45.0%
CCCAAATGATTCATGGCCTT+GGG + chr2_4:24804602-24804621 Msa0322370:three_prime_UTR 45.0%
! CCAAATGATTCATGGCCTTG+GGG + chr2_4:24804603-24804622 Msa0322370:three_prime_UTR 45.0%
GTGTCAAGGGTCACATGTTC+TGG - chr2_4:24801376-24801395 None:intergenic 50.0%
GCTTGATGCTGCAGCAACTA+AGG + chr2_4:24801486-24801505 Msa0322370:CDS 50.0%
GAAACTGCAGTGTCAAGGTG+GGG + chr2_4:24801997-24802016 Msa0322370:CDS 50.0%
CAGCTTCAAGCCAATGTTGG+AGG - chr2_4:24802213-24802232 None:intergenic 50.0%
ATGACGTGGGTCAATCTGTG+GGG - chr2_4:24802345-24802364 None:intergenic 50.0%
GATGACGTGGGTCAATCTGT+GGG - chr2_4:24802346-24802365 None:intergenic 50.0%
! AATACACTGGCGTTGAAGGG+TGG - chr2_4:24802607-24802626 None:intergenic 50.0%
CACTAATCTTCCAGCAGCTG+TGG - chr2_4:24803008-24803027 None:intergenic 50.0%
CACAGCTGCTGGAAGATTAG+TGG + chr2_4:24803006-24803025 Msa0322370:CDS 50.0%
ATGGCCCAATACCTTCTCCA+AGG + chr2_4:24804048-24804067 Msa0322370:CDS 50.0%
!! CTTGGCCTTGGAGAAGGTAT+TGG - chr2_4:24804056-24804075 None:intergenic 50.0%
! CTAACTTTTGGGCTTGGCCT+TGG - chr2_4:24804068-24804087 None:intergenic 50.0%
CAAGGCCAAGCCCAAAAGTT+AGG + chr2_4:24804066-24804085 Msa0322370:CDS 50.0%
CTCCTAGGCTTGCATACATG+GGG + chr2_4:24804093-24804112 Msa0322370:CDS 50.0%
AACCCCATGTATGCAAGCCT+AGG - chr2_4:24804098-24804117 None:intergenic 50.0%
CATCGATACTCGCCTCAAAC+AGG - chr2_4:24804143-24804162 None:intergenic 50.0%
!! CTGTTTGAGGCGAGTATCGA+TGG + chr2_4:24804141-24804160 Msa0322370:exon 50.0%
!! AGGCGAGTATCGATGGAACT+AGG + chr2_4:24804148-24804167 Msa0322370:exon 50.0%
!! GGCGAGTATCGATGGAACTA+GGG + chr2_4:24804149-24804168 Msa0322370:three_prime_UTR 50.0%
TCGGGGAGAATCTAGTGCAT+AGG - chr2_4:24804183-24804202 None:intergenic 50.0%
TCTCCTACTTCAGTCGTCAG+AGG - chr2_4:24804282-24804301 None:intergenic 50.0%
TCTGACGACTGAAGTAGGAG+AGG + chr2_4:24804281-24804300 Msa0322370:three_prime_UTR 50.0%
CCCCAAGGCCATGAATCATT+TGG - chr2_4:24804606-24804625 None:intergenic 50.0%
TGCAGTGTCAAGGTGGGGAA+GGG + chr2_4:24802002-24802021 Msa0322370:CDS 55.0%
GGCAAGGACAAGAGCAGCTA+AGG + chr2_4:24802023-24802042 Msa0322370:CDS 55.0%
CGATGACGTGGGTCAATCTG+TGG - chr2_4:24802347-24802366 None:intergenic 55.0%
TCTTCCAGCAGCTGTGGTTG+CGG - chr2_4:24803002-24803021 None:intergenic 55.0%
GGCACAACAAGGTGTACTCG+AGG + chr2_4:24803027-24803046 Msa0322370:CDS 55.0%
TGCAAGTGGTCTACAGGAGC+TGG + chr2_4:24803921-24803940 Msa0322370:CDS 55.0%
ACAGGAGCTGGACCTCGTAT+TGG + chr2_4:24803933-24803952 Msa0322370:CDS 55.0%
CAGGAGCTGGACCTCGTATT+GGG + chr2_4:24803934-24803953 Msa0322370:CDS 55.0%
TCACGCACACACCCAATACG+AGG - chr2_4:24803948-24803967 None:intergenic 55.0%
GGTCTTGCAGAAGCAGGTCT+AGG - chr2_4:24804020-24804039 None:intergenic 55.0%
!! TTTGGGCTTGGCCTTGGAGA+AGG - chr2_4:24804062-24804081 None:intergenic 55.0%
GGAATCGGAGTTCTTGGGCT+AGG - chr2_4:24804122-24804141 None:intergenic 55.0%
TGGCCTCTGACGACTGAAGT+AGG + chr2_4:24804276-24804295 Msa0322370:three_prime_UTR 55.0%
CTGCAGTGTCAAGGTGGGGA+AGG + chr2_4:24802001-24802020 Msa0322370:CDS 60.0%
TGTCAAGGTGGGGAAGGGCA+AGG + chr2_4:24802007-24802026 Msa0322370:CDS 60.0%
! TGGCGTTGAAGGGTGGCCCT+TGG - chr2_4:24802600-24802619 None:intergenic 65.0%
GGGGCCGCAACCACAGCTGC+TGG + chr2_4:24802995-24803014 Msa0322370:CDS 75.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 24800781 24804632 24800781 ID=Msa0322370;Name=Msa0322370
chr2_4 mRNA 24800781 24804632 24800781 ID=Msa0322370-mRNA-1;Parent=Msa0322370;Name=Msa0322370-mRNA-1;_AED=0.01;_eAED=0.01;_QI=140|1|1|1|0.87|0.77|9|484|508
chr2_4 exon 24800781 24800854 24800781 ID=Msa0322370-mRNA-1:exon:8893;Parent=Msa0322370-mRNA-1
chr2_4 exon 24801121 24801581 24801121 ID=Msa0322370-mRNA-1:exon:8894;Parent=Msa0322370-mRNA-1
chr2_4 exon 24801930 24802044 24801930 ID=Msa0322370-mRNA-1:exon:8895;Parent=Msa0322370-mRNA-1
chr2_4 exon 24802166 24802231 24802166 ID=Msa0322370-mRNA-1:exon:8896;Parent=Msa0322370-mRNA-1
chr2_4 exon 24802350 24802438 24802350 ID=Msa0322370-mRNA-1:exon:8897;Parent=Msa0322370-mRNA-1
chr2_4 exon 24802554 24802641 24802554 ID=Msa0322370-mRNA-1:exon:8898;Parent=Msa0322370-mRNA-1
chr2_4 exon 24802818 24803048 24802818 ID=Msa0322370-mRNA-1:exon:8899;Parent=Msa0322370-mRNA-1
chr2_4 exon 24803311 24803412 24803311 ID=Msa0322370-mRNA-1:exon:8900;Parent=Msa0322370-mRNA-1
chr2_4 exon 24803708 24804632 24803708 ID=Msa0322370-mRNA-1:exon:8901;Parent=Msa0322370-mRNA-1
chr2_4 five_prime_UTR 24800781 24800854 24800781 ID=Msa0322370-mRNA-1:five_prime_utr;Parent=Msa0322370-mRNA-1
chr2_4 five_prime_UTR 24801121 24801186 24801121 ID=Msa0322370-mRNA-1:five_prime_utr;Parent=Msa0322370-mRNA-1
chr2_4 CDS 24801187 24801581 24801187 ID=Msa0322370-mRNA-1:cds;Parent=Msa0322370-mRNA-1
chr2_4 CDS 24801930 24802044 24801930 ID=Msa0322370-mRNA-1:cds;Parent=Msa0322370-mRNA-1
chr2_4 CDS 24802166 24802231 24802166 ID=Msa0322370-mRNA-1:cds;Parent=Msa0322370-mRNA-1
chr2_4 CDS 24802350 24802438 24802350 ID=Msa0322370-mRNA-1:cds;Parent=Msa0322370-mRNA-1
chr2_4 CDS 24802554 24802641 24802554 ID=Msa0322370-mRNA-1:cds;Parent=Msa0322370-mRNA-1
chr2_4 CDS 24802818 24803048 24802818 ID=Msa0322370-mRNA-1:cds;Parent=Msa0322370-mRNA-1
chr2_4 CDS 24803311 24803412 24803311 ID=Msa0322370-mRNA-1:cds;Parent=Msa0322370-mRNA-1
chr2_4 CDS 24803708 24804148 24803708 ID=Msa0322370-mRNA-1:cds;Parent=Msa0322370-mRNA-1
chr2_4 three_prime_UTR 24804149 24804632 24804149 ID=Msa0322370-mRNA-1:three_prime_utr;Parent=Msa0322370-mRNA-1
Gene Sequence

>Msa0322370

ATGGGATTATCACTTTCTTTACTATCATCAGCTTGGGAAGAAATTGTTAGGCATTCACTCTTTGGTCTTCAATTCAACTATAGTTTTGGTTCCAAAGATGGTGCTATGATTTTGAGAACAAGTTTCAACAAAAGGGAATCAAAAACTTCAACACCAAAAAATTCAACTAGGTTAGAGGATTATAGACCAGAACATGTGACCCTTGACACAAATGTTGATGAAAACTTGAAACATAAGGCAGTTCCTTTGCTTTCTTTGCCTAAAGAAGTTGTTTTCTCTTCTCCAAAACCTGTTTTTGAGCTTGATGCTGCAGCAACTAAGGTTCAGAAAGTTTACAAGAGTTATAGAACTAGAAGAAATCTTGCTGATTGTGCTGTTGTTGTTGAGGAACTATGGTGGAAAGCATTGGATTTTGCTGCTCTTAGAAGAAGTTCTGTTTCATTTTTTGATGAACATAAACAAGAAACTGCAGTGTCAAGGTGGGGAAGGGCAAGGACAAGAGCAGCTAAGGTTGGAAAAGGTTTGTCCAAGGATGACAAAGCACAAAAATTAGCCCTCCAACATTGGCTTGAAGCTATTGACCCACGTCATCGTTATGGACACAATTTGCACTTATATTATGATATTTGGTTTGAGAGCCAAAGTACTCAACCATTTTTCTATTGGTTGGATGTTGGAGATGGTAAAGAAATTAATCTTGAGAAATGTCCAAGGGCCACCCTTCAACGCCAGTGTATTAAATATCTTGGACCAAAAGAAAGGGAAGAATATGAAGTAATTGTTGAAAAGGGAAAGTTGGTGTATAGAAAAGATGGGAAGTTTGTGGAGACTGATGAAAAGTCCAAATGGATATTTGTTCTTAGCACCACTAGGGCTTTGTATGTTGGAAGGAAACAAAAGGGTGCTTTTCAACACTCTAGCTTTCTATCTGGGGCCGCAACCACAGCTGCTGGAAGATTAGTGGCACAACAAGGTGTACTCGAGGCTATTTGGCCTTATAGTGGTCATTATCACCCAACTGAAGAGAACTTCAGAGAATTTGTTAGCTTTCTTGAGGAGCACAAAGTGGACCTCTCTAATGTCAAGAGATATGCTATAGATGATGATGCACCTTCATTCATTGGGACCAATCCATTTATTGAAACTAATGAATCACAACAAACTATGGACCCTACTCAAACTTCTCAATCAATATCTACCAATAATGTGAGCAACAAAGGAATCAAAATTAATAATGCAACAGAGGTTAATGCCAAGAAATTTGAGGTCCCAGTATTTGACTTTTCCAAGAGATTATCATGCAAGTGGTCTACAGGAGCTGGACCTCGTATTGGGTGTGTGCGTGACTATCCTGAACATCTTCAATCAAGGGCATTGGAGCAAGTTAGTTTGTCACCTAGACCTGCTTCTGCAAGACCATATAGCTATGGCCCAATACCTTCTCCAAGGCCAAGCCCAAAAGTTAGGATTTCTCCTAGGCTTGCATACATGGGGTTACCTAGCCCAAGAACTCCGATTCCTGTTTGA
Protein sequence

>Msa0322370

MGLSLSLLSSAWEEIVRHSLFGLQFNYSFGSKDGAMILRTSFNKRESKTSTPKNSTRLEDYRPEHVTLDTNVDENLKHKAVPLLSLPKEVVFSSPKPVFELDAAATKVQKVYKSYRTRRNLADCAVVVEELWWKALDFAALRRSSVSFFDEHKQETAVSRWGRARTRAAKVGKGLSKDDKAQKLALQHWLEAIDPRHRYGHNLHLYYDIWFESQSTQPFFYWLDVGDGKEINLEKCPRATLQRQCIKYLGPKEREEYEVIVEKGKLVYRKDGKFVETDEKSKWIFVLSTTRALYVGRKQKGAFQHSSFLSGAATTAAGRLVAQQGVLEAIWPYSGHYHPTEENFREFVSFLEEHKVDLSNVKRYAIDDDAPSFIGTNPFIETNESQQTMDPTQTSQSISTNNVSNKGIKINNATEVNAKKFEVPVFDFSKRLSCKWSTGAGPRIGCVRDYPEHLQSRALEQVSLSPRPASARPYSYGPIPSPRPSPKVRISPRLAYMGLPSPRTPIPV*