Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0776750 | sp|Q9FGH9|E70B1_ARATH | 69.436 | 638 | 174 | 7 | 1 | 635 | 1 | 620 | 0.0 | 890 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0776750 | G7JZR5 | 98.602 | 644 | 9 | 0 | 1 | 644 | 1 | 644 | 0.0 | 1321 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002560 | Msa0776750 | 0.810787 | 9.690053e-51 | -8.615850e-47 |
| Msa0012710 | Msa0776750 | 0.815149 | 1.071933e-51 | -8.615850e-47 |
| Msa0014830 | Msa0776750 | 0.813118 | 3.009111e-51 | -8.615850e-47 |
| Msa0017320 | Msa0776750 | 0.810454 | 1.143591e-50 | -8.615850e-47 |
| Msa0041690 | Msa0776750 | 0.805823 | 1.108125e-49 | -8.615850e-47 |
| Msa0055070 | Msa0776750 | 0.820117 | 8.126083e-53 | -8.615850e-47 |
| Msa0061200 | Msa0776750 | 0.801547 | 8.551239e-49 | -8.615850e-47 |
| Msa0061500 | Msa0776750 | 0.803230 | 3.849500e-49 | -8.615850e-47 |
| Msa0074750 | Msa0776750 | 0.832288 | 1.029591e-55 | -8.615850e-47 |
| Msa0095360 | Msa0776750 | 0.810537 | 1.097078e-50 | -8.615850e-47 |
| Msa0095770 | Msa0776750 | 0.813447 | 2.548302e-51 | -8.615850e-47 |
| Msa0101020 | Msa0776750 | 0.823468 | 1.362748e-53 | -8.615850e-47 |
| Msa0111080 | Msa0776750 | 0.813710 | 2.229905e-51 | -8.615850e-47 |
| Msa0119440 | Msa0776750 | 0.825373 | 4.857815e-54 | -8.615850e-47 |
| Msa0615680 | Msa0776750 | 0.807158 | 5.793829e-50 | -8.615850e-47 |
| Msa0616450 | Msa0776750 | 0.835591 | 1.534617e-56 | -8.615850e-47 |
| Msa0617260 | Msa0776750 | 0.830951 | 2.199205e-55 | -8.615850e-47 |
| Msa0620330 | Msa0776750 | 0.819730 | 9.961106e-53 | -8.615850e-47 |
| Msa0624120 | Msa0776750 | 0.815486 | 9.020989e-52 | -8.615850e-47 |
| Msa0655920 | Msa0776750 | 0.804527 | 2.069942e-49 | -8.615850e-47 |
| Msa0679550 | Msa0776750 | 0.814856 | 1.244619e-51 | -8.615850e-47 |
| Msa0706390 | Msa0776750 | 0.808211 | 3.461933e-50 | -8.615850e-47 |
| Msa0707430 | Msa0776750 | 0.809948 | 1.470100e-50 | -8.615850e-47 |
| Msa0708770 | Msa0776750 | 0.806243 | 9.043910e-50 | -8.615850e-47 |
| Msa0721340 | Msa0776750 | 0.833128 | 6.370130e-56 | -8.615850e-47 |
| Msa0732600 | Msa0776750 | 0.838024 | 3.675413e-57 | -8.615850e-47 |
| Msa0743530 | Msa0776750 | 0.863922 | 1.761152e-64 | -8.615850e-47 |
| Msa0746170 | Msa0776750 | 0.820173 | 7.886819e-53 | -8.615850e-47 |
| Msa0746210 | Msa0776750 | 0.815917 | 7.232185e-52 | -8.615850e-47 |
| Msa0750250 | Msa0776750 | 0.812879 | 3.394192e-51 | -8.615850e-47 |
| Msa0758250 | Msa0776750 | 0.807401 | 5.145948e-50 | -8.615850e-47 |
| Msa0776750 | Msa0779260 | 0.813527 | 2.447360e-51 | -8.615850e-47 |
| Msa0776750 | Msa0787150 | 0.813342 | 2.686606e-51 | -8.615850e-47 |
| Msa0776750 | Msa0789560 | 0.815172 | 1.059455e-51 | -8.615850e-47 |
| Msa0776750 | Msa0805420 | 0.809113 | 2.221016e-50 | -8.615850e-47 |
| Msa0776750 | Msa0809140 | 0.800442 | 1.438628e-48 | -8.615850e-47 |
| Msa0776750 | Msa0811040 | 0.811689 | 6.173439e-51 | -8.615850e-47 |
| Msa0776750 | Msa0813260 | 0.819498 | 1.125470e-52 | -8.615850e-47 |
| Msa0776750 | Msa0818770 | 0.847560 | 1.070234e-59 | -8.615850e-47 |
| Msa0776750 | Msa0821800 | 0.803323 | 3.682202e-49 | -8.615850e-47 |
| Msa0776750 | Msa0822170 | 0.840598 | 7.895679e-58 | -8.615850e-47 |
| Msa0776750 | Msa0830210 | 0.802098 | 6.591898e-49 | -8.615850e-47 |
| Msa0776750 | Msa0836650 | 0.804180 | 2.445118e-49 | -8.615850e-47 |
| Msa0776750 | Msa0842770 | 0.810482 | 1.127734e-50 | -8.615850e-47 |
| Msa0776750 | Msa0847470 | 0.816721 | 4.778079e-52 | -8.615850e-47 |
| Msa0776750 | Msa0857300 | 0.897140 | 1.875919e-76 | -8.615850e-47 |
| Msa0776750 | Msa0858440 | 0.806299 | 8.798657e-50 | -8.615850e-47 |
| Msa0776750 | Msa0865970 | 0.815448 | 9.197332e-52 | -8.615850e-47 |
| Msa0776750 | Msa0866070 | 0.811432 | 7.023406e-51 | -8.615850e-47 |
| Msa0776750 | Msa0866400 | 0.808939 | 2.420204e-50 | -8.615850e-47 |
| Msa0776750 | Msa0877710 | 0.860775 | 1.633047e-63 | -8.615850e-47 |
| Msa0776750 | Msa1010460 | 0.802358 | 5.825802e-49 | -8.615850e-47 |
| Msa0776750 | Msa1033970 | 0.837466 | 5.111681e-57 | -8.615850e-47 |
| Msa0776750 | Msa1036740 | 0.803277 | 3.764933e-49 | -8.615850e-47 |
| Msa0776750 | Msa1063420 | 0.808230 | 3.430737e-50 | -8.615850e-47 |
| Msa0776750 | Msa1071660 | 0.844856 | 5.833294e-59 | -8.615850e-47 |
| Msa0776750 | Msa1073830 | 0.868946 | 4.473156e-66 | -8.615850e-47 |
| Msa0776750 | Msa1077070 | 0.810257 | 1.261421e-50 | -8.615850e-47 |
| Msa0776750 | Msa1096550 | 0.818432 | 1.966644e-52 | -8.615850e-47 |
| Msa0776750 | Msa1098890 | 0.802581 | 5.242912e-49 | -8.615850e-47 |
| Msa0776750 | Msa1113590 | 0.815881 | 7.365566e-52 | -8.615850e-47 |
| Msa0776750 | Msa1114040 | 0.811561 | 6.581662e-51 | -8.615850e-47 |
| Msa0776750 | Msa1115280 | 0.807550 | 4.784992e-50 | -8.615850e-47 |
| Msa0776750 | Msa1118710 | 0.823128 | 1.636006e-53 | -8.615850e-47 |
| Msa0776750 | Msa1122780 | 0.817638 | 2.972228e-52 | -8.615850e-47 |
| Msa0776750 | Msa1127430 | 0.854754 | 9.968049e-62 | -8.615850e-47 |
| Msa0776750 | Msa1130400 | 0.825682 | 4.102437e-54 | -8.615850e-47 |
| Msa0776750 | Msa1158770 | 0.857828 | 1.251089e-62 | -8.615850e-47 |
| Msa0776750 | Msa1164020 | 0.814360 | 1.603167e-51 | -8.615850e-47 |
| Msa0776750 | Msa1168550 | 0.807695 | 4.458412e-50 | -8.615850e-47 |
| Msa0776750 | Msa1168590 | 0.806366 | 8.518220e-50 | -8.615850e-47 |
| Msa0776750 | Msa1176980 | 0.801903 | 7.229933e-49 | -8.615850e-47 |
| Msa0776750 | Msa1178370 | 0.800387 | 1.475811e-48 | -8.615850e-47 |
| Msa0776750 | Msa1188560 | 0.830132 | 3.488308e-55 | -8.615850e-47 |
| Msa0776750 | Msa1190970 | 0.807500 | 4.904859e-50 | -8.615850e-47 |
| Msa0776750 | Msa1197070 | 0.803083 | 4.128855e-49 | -8.615850e-47 |
| Msa0776750 | Msa1200320 | 0.834078 | 3.690040e-56 | -8.615850e-47 |
| Msa0776750 | Msa1206650 | 0.800328 | 1.517343e-48 | -8.615850e-47 |
| Msa0776750 | Msa1209190 | 0.811463 | 6.913674e-51 | -8.615850e-47 |
| Msa0776750 | Msa1209860 | 0.811403 | 7.125878e-51 | -8.615850e-47 |
| Msa0776750 | Msa1211350 | 0.864781 | 9.497875e-65 | -8.615850e-47 |
| Msa0776750 | Msa1270660 | 0.806337 | 8.640668e-50 | -8.615850e-47 |
| Msa0776750 | Msa1286550 | 0.813492 | 2.490479e-51 | -8.615850e-47 |
| Msa0776750 | Msa1293590 | 0.819045 | 1.427179e-52 | -8.615850e-47 |
| Msa0776750 | Msa1296300 | 0.816476 | 5.422410e-52 | -8.615850e-47 |
| Msa0776750 | Msa1329800 | 0.850490 | 1.642045e-60 | -8.615850e-47 |
| Msa0776750 | Msa1332050 | 0.832028 | 1.193771e-55 | -8.615850e-47 |
| Msa0776750 | Msa1336040 | 0.856418 | 3.260648e-62 | -8.615850e-47 |
| Msa0776750 | Msa1344310 | 0.808127 | 3.608232e-50 | -8.615850e-47 |
| Msa0776750 | Msa1361250 | 0.812163 | 4.867193e-51 | -8.615850e-47 |
| Msa0776750 | Msa1370590 | 0.814445 | 1.534772e-51 | -8.615850e-47 |
| Msa0776750 | Msa1372290 | 0.804132 | 2.501839e-49 | -8.615850e-47 |
| Msa0776750 | Msa1384100 | 0.814121 | 1.810645e-51 | -8.615850e-47 |
| Msa0776750 | Msa1400050 | 0.812840 | 3.462845e-51 | -8.615850e-47 |
| Msa0776750 | Msa1400120 | 0.818156 | 2.270768e-52 | -8.615850e-47 |
| Msa0776750 | Msa1416260 | 0.815175 | 1.057841e-51 | -8.615850e-47 |
| Msa0776750 | Msa1421900 | 0.813088 | 3.054756e-51 | -8.615850e-47 |
| Msa0776750 | Msa1422840 | 0.802144 | 6.448774e-49 | -8.615850e-47 |
| Msa0776750 | Msa1424350 | 0.827839 | 1.253680e-54 | -8.615850e-47 |
| Msa0776750 | Msa1432130 | 0.810904 | 9.140640e-51 | -8.615850e-47 |
| Msa0776750 | Msa1442790 | 0.816769 | 4.661442e-52 | -8.615850e-47 |
| Msa0776750 | Msa1444120 | 0.826410 | 2.754300e-54 | -8.615850e-47 |
| Msa0776750 | Msa1446080 | 0.842463 | 2.546116e-58 | -8.615850e-47 |
| Msa0776750 | Msa1458030 | 0.823155 | 1.613142e-53 | -8.615850e-47 |
| Msa0776750 | Msa1462470 | 0.808896 | 2.471945e-50 | -8.615850e-47 |
| Msa0776750 | Msa1463600 | 0.804040 | 2.614070e-49 | -8.615850e-47 |
| Msa0776750 | Msa1465570 | 0.803880 | 2.823002e-49 | -8.615850e-47 |
| Msa0138210 | Msa0776750 | 0.804901 | 1.728965e-49 | -8.615850e-47 |
| Msa0145110 | Msa0776750 | 0.820181 | 7.855448e-53 | -8.615850e-47 |
| Msa0154920 | Msa0776750 | 0.825738 | 3.980140e-54 | -8.615850e-47 |
| Msa0161070 | Msa0776750 | -0.808340 | 3.250390e-50 | -8.615850e-47 |
| Msa0174260 | Msa0776750 | 0.804398 | 2.201973e-49 | -8.615850e-47 |
| Msa0187490 | Msa0776750 | 0.810216 | 1.286918e-50 | -8.615850e-47 |
| Msa0190950 | Msa0776750 | 0.802534 | 5.361281e-49 | -8.615850e-47 |
| Msa0192640 | Msa0776750 | 0.830822 | 2.364445e-55 | -8.615850e-47 |
| Msa0193540 | Msa0776750 | 0.804579 | 2.018873e-49 | -8.615850e-47 |
| Msa0197610 | Msa0776750 | 0.826272 | 2.971687e-54 | -8.615850e-47 |
| Msa0202930 | Msa0776750 | 0.850968 | 1.204287e-60 | -8.615850e-47 |
| Msa0220730 | Msa0776750 | 0.800192 | 1.617205e-48 | -8.615850e-47 |
| Msa0223120 | Msa0776750 | 0.804235 | 2.380895e-49 | -8.615850e-47 |
| Msa0228030 | Msa0776750 | 0.802360 | 5.822323e-49 | -8.615850e-47 |
| Msa0236070 | Msa0776750 | 0.821096 | 4.840856e-53 | -8.615850e-47 |
| Msa0238030 | Msa0776750 | 0.805435 | 1.336493e-49 | -8.615850e-47 |
| Msa0376020 | Msa0776750 | 0.808481 | 3.032800e-50 | -8.615850e-47 |
| Msa0376600 | Msa0776750 | 0.804088 | 2.555231e-49 | -8.615850e-47 |
| Msa0382370 | Msa0776750 | 0.824880 | 6.350471e-54 | -8.615850e-47 |
| Msa0384670 | Msa0776750 | 0.804100 | 2.539862e-49 | -8.615850e-47 |
| Msa0403490 | Msa0776750 | 0.807890 | 4.052158e-50 | -8.615850e-47 |
| Msa0423270 | Msa0776750 | 0.822166 | 2.739547e-53 | -8.615850e-47 |
| Msa0432160 | Msa0776750 | 0.810377 | 1.187886e-50 | -8.615850e-47 |
| Msa0434570 | Msa0776750 | 0.800895 | 1.162826e-48 | -8.615850e-47 |
| Msa0434770 | Msa0776750 | 0.802586 | 5.228468e-49 | -8.615850e-47 |
| Msa0439890 | Msa0776750 | 0.844082 | 9.423324e-59 | -8.615850e-47 |
| Msa0442310 | Msa0776750 | 0.826384 | 2.794551e-54 | -8.615850e-47 |
| Msa0443430 | Msa0776750 | 0.807036 | 6.149480e-50 | -8.615850e-47 |
| Msa0469350 | Msa0776750 | 0.803028 | 4.237324e-49 | -8.615850e-47 |
| Msa0472720 | Msa0776750 | 0.808335 | 3.257194e-50 | -8.615850e-47 |
| Msa0472770 | Msa0776750 | 0.805289 | 1.434613e-49 | -8.615850e-47 |
| Msa0476680 | Msa0776750 | 0.803370 | 3.601267e-49 | -8.615850e-47 |
| Msa0271790 | Msa0776750 | 0.809104 | 2.231255e-50 | -8.615850e-47 |
| Msa0284450 | Msa0776750 | 0.815147 | 1.072938e-51 | -8.615850e-47 |
| Msa0310430 | Msa0776750 | 0.800555 | 1.364272e-48 | -8.615850e-47 |
| Msa0312910 | Msa0776750 | 0.813865 | 2.061563e-51 | -8.615850e-47 |
| Msa0313930 | Msa0776750 | 0.801758 | 7.742383e-49 | -8.615850e-47 |
| Msa0322370 | Msa0776750 | 0.801193 | 1.010705e-48 | -8.615850e-47 |
| Msa0322680 | Msa0776750 | 0.800657 | 1.300467e-48 | -8.615850e-47 |
| Msa0335320 | Msa0776750 | -0.815690 | 8.124920e-52 | -8.615850e-47 |
| Msa0342290 | Msa0776750 | 0.807945 | 3.943654e-50 | -8.615850e-47 |
| Msa0347750 | Msa0776750 | 0.829390 | 5.287102e-55 | -8.615850e-47 |
| Msa0347990 | Msa0776750 | 0.814068 | 1.859973e-51 | -8.615850e-47 |
| Msa0351330 | Msa0776750 | 0.840650 | 7.653636e-58 | -8.615850e-47 |
| Msa0358120 | Msa0776750 | 0.807806 | 4.222262e-50 | -8.615850e-47 |
| Msa0482940 | Msa0776750 | 0.815602 | 8.500774e-52 | -8.615850e-47 |
| Msa0489660 | Msa0776750 | 0.804616 | 1.982918e-49 | -8.615850e-47 |
| Msa0514610 | Msa0776750 | 0.860714 | 1.703506e-63 | -8.615850e-47 |
| Msa0516020 | Msa0776750 | 0.808967 | 2.387499e-50 | -8.615850e-47 |
| Msa0517640 | Msa0776750 | 0.806046 | 9.948751e-50 | -8.615850e-47 |
| Msa0537770 | Msa0776750 | 0.802838 | 4.639816e-49 | -8.615850e-47 |
| Msa0538160 | Msa0776750 | 0.807636 | 4.589313e-50 | -8.615850e-47 |
| Msa0566350 | Msa0776750 | 0.800910 | 1.154590e-48 | -8.615850e-47 |
| Msa0566750 | Msa0776750 | 0.800808 | 1.211322e-48 | -8.615850e-47 |
| Msa0569780 | Msa0776750 | 0.800991 | 1.111601e-48 | -8.615850e-47 |
| Msa0569800 | Msa0776750 | 0.812120 | 4.974501e-51 | -8.615850e-47 |
| Msa0583500 | Msa0776750 | 0.809660 | 1.695829e-50 | -8.615850e-47 |
| Msa0585650 | Msa0776750 | -0.821477 | 3.954658e-53 | -8.615850e-47 |
| Msa0594200 | Msa0776750 | 0.807280 | 5.461138e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0776750 | MtrunA17_Chr5g0431731 | 98.602 | 644 | 9 | 0 | 1 | 644 | 1 | 644 | 0.0 | 1321 |
| Msa0776750 | MtrunA17_Chr3g0106431 | 69.612 | 645 | 176 | 5 | 1 | 642 | 1 | 628 | 0.0 | 869 |
| Msa0776750 | MtrunA17_Chr5g0431741 | 64.574 | 446 | 156 | 2 | 194 | 637 | 251 | 696 | 0.0 | 588 |
| Msa0776750 | MtrunA17_Chr5g0432091 | 51.092 | 458 | 208 | 5 | 199 | 643 | 259 | 713 | 3.01e-143 | 433 |
| Msa0776750 | MtrunA17_Chr5g0431761 | 58.005 | 381 | 108 | 4 | 194 | 571 | 252 | 583 | 1.23e-142 | 427 |
| Msa0776750 | MtrunA17_Chr5g0431811 | 62.575 | 334 | 105 | 2 | 194 | 525 | 280 | 595 | 1.14e-131 | 413 |
| Msa0776750 | MtrunA17_Chr5g0431811 | 39.147 | 258 | 135 | 4 | 378 | 634 | 833 | 1069 | 8.68e-41 | 160 |
| Msa0776750 | MtrunA17_Chr8g0344461 | 41.667 | 456 | 254 | 5 | 201 | 644 | 161 | 616 | 4.78e-123 | 378 |
| Msa0776750 | MtrunA17_Chr4g0057561 | 34.143 | 659 | 394 | 10 | 6 | 634 | 33 | 681 | 8.46e-117 | 364 |
| Msa0776750 | MtrunA17_Chr6g0462011 | 36.746 | 547 | 309 | 10 | 114 | 644 | 212 | 737 | 2.19e-113 | 356 |
| Msa0776750 | MtrunA17_Chr7g0219041 | 33.683 | 668 | 388 | 14 | 6 | 634 | 16 | 667 | 1.32e-111 | 350 |
| Msa0776750 | MtrunA17_Chr7g0224041 | 37.989 | 537 | 308 | 10 | 119 | 643 | 137 | 660 | 5.34e-111 | 348 |
| Msa0776750 | MtrunA17_Chr1g0177671 | 32.647 | 631 | 395 | 9 | 22 | 641 | 22 | 633 | 3.30e-108 | 340 |
| Msa0776750 | MtrunA17_Chr5g0432041 | 44.643 | 448 | 226 | 9 | 190 | 631 | 242 | 673 | 3.86e-108 | 341 |
| Msa0776750 | MtrunA17_Chr1g0197101 | 31.125 | 649 | 396 | 11 | 22 | 641 | 23 | 649 | 1.20e-105 | 333 |
| Msa0776750 | MtrunA17_Chr1g0214001 | 33.612 | 598 | 335 | 12 | 91 | 642 | 96 | 677 | 8.44e-96 | 308 |
| Msa0776750 | MtrunA17_Chr3g0086881 | 31.472 | 591 | 355 | 13 | 70 | 637 | 49 | 612 | 4.11e-88 | 287 |
| Msa0776750 | MtrunA17_Chr3g0104851 | 39.732 | 448 | 242 | 11 | 196 | 635 | 243 | 670 | 3.49e-83 | 275 |
| Msa0776750 | MtrunA17_Chr2g0327741 | 29.114 | 553 | 354 | 9 | 94 | 640 | 68 | 588 | 6.65e-83 | 272 |
| Msa0776750 | MtrunA17_Chr4g0030621 | 30.853 | 551 | 348 | 11 | 94 | 631 | 72 | 602 | 2.04e-79 | 264 |
| Msa0776750 | MtrunA17_Chr5g0431871 | 66.111 | 180 | 59 | 1 | 201 | 378 | 1 | 180 | 1.92e-74 | 237 |
| Msa0776750 | MtrunA17_Chr1g0182041 | 30.250 | 519 | 332 | 11 | 125 | 631 | 100 | 600 | 2.40e-72 | 244 |
| Msa0776750 | MtrunA17_Chr5g0431971 | 40.823 | 316 | 168 | 5 | 321 | 634 | 28 | 326 | 7.09e-67 | 222 |
| Msa0776750 | MtrunA17_Chr1g0182031 | 28.571 | 518 | 343 | 9 | 125 | 631 | 98 | 599 | 2.24e-66 | 228 |
| Msa0776750 | MtrunA17_Chr5g0444661 | 45.421 | 273 | 134 | 5 | 297 | 565 | 162 | 423 | 2.40e-59 | 205 |
| Msa0776750 | MtrunA17_Chr5g0431991 | 49.758 | 207 | 76 | 6 | 177 | 378 | 233 | 416 | 4.45e-45 | 166 |
| Msa0776750 | MtrunA17_Chr5g0431881 | 39.669 | 242 | 124 | 4 | 394 | 634 | 4 | 224 | 6.81e-44 | 157 |
| Msa0776750 | MtrunA17_Chr1g0147911 | 26.296 | 521 | 333 | 10 | 131 | 642 | 184 | 662 | 7.72e-39 | 152 |
| Msa0776750 | MtrunA17_Chr5g0431891 | 38.384 | 198 | 80 | 3 | 200 | 396 | 127 | 283 | 5.46e-30 | 119 |
| Msa0776750 | MtrunA17_Chr1g0152401 | 26.077 | 441 | 267 | 12 | 197 | 599 | 242 | 661 | 1.93e-29 | 124 |
| Msa0776750 | MtrunA17_Chr5g0431821 | 38.776 | 196 | 78 | 3 | 202 | 396 | 275 | 429 | 3.74e-29 | 120 |
| Msa0776750 | MtrunA17_Chr4g0002391 | 25.339 | 442 | 295 | 12 | 205 | 632 | 220 | 640 | 2.21e-26 | 114 |
| Msa0776750 | MtrunA17_Chr2g0300651 | 23.282 | 451 | 293 | 10 | 205 | 632 | 218 | 638 | 5.78e-23 | 103 |
| Msa0776750 | MtrunA17_Chr5g0431981 | 38.971 | 136 | 72 | 3 | 196 | 326 | 242 | 371 | 1.03e-22 | 100 |
| Msa0776750 | MtrunA17_Chr5g0432061 | 38.806 | 134 | 68 | 4 | 340 | 470 | 1 | 123 | 1.85e-14 | 70.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0776750 | AT5G58430.1 | 69.436 | 638 | 174 | 7 | 1 | 635 | 1 | 620 | 0.0 | 890 |
| Msa0776750 | AT1G07000.1 | 50.078 | 645 | 265 | 10 | 1 | 635 | 1 | 598 | 0.0 | 635 |
| Msa0776750 | AT5G50380.1 | 35.000 | 660 | 386 | 11 | 7 | 634 | 24 | 672 | 4.64e-120 | 372 |
| Msa0776750 | AT5G13990.1 | 38.160 | 587 | 329 | 14 | 74 | 643 | 124 | 693 | 2.68e-119 | 371 |
| Msa0776750 | AT3G14090.1 | 36.280 | 543 | 317 | 7 | 126 | 643 | 85 | 623 | 2.19e-117 | 363 |
| Msa0776750 | AT1G72470.1 | 41.394 | 459 | 250 | 7 | 201 | 644 | 178 | 632 | 2.59e-116 | 361 |
| Msa0776750 | AT5G13150.1 | 36.752 | 585 | 308 | 13 | 91 | 643 | 99 | 653 | 1.14e-112 | 352 |
| Msa0776750 | AT1G54090.1 | 39.735 | 453 | 260 | 6 | 201 | 642 | 170 | 620 | 1.08e-111 | 349 |
| Msa0776750 | AT5G03540.1 | 32.808 | 634 | 383 | 9 | 22 | 635 | 22 | 632 | 9.91e-109 | 342 |
| Msa0776750 | AT5G03540.3 | 32.675 | 658 | 390 | 11 | 22 | 641 | 22 | 664 | 4.35e-107 | 338 |
| Msa0776750 | AT5G03540.2 | 35.835 | 533 | 304 | 7 | 119 | 635 | 7 | 517 | 6.75e-106 | 331 |
| Msa0776750 | AT5G52340.1 | 30.941 | 627 | 409 | 6 | 22 | 641 | 22 | 631 | 1.39e-105 | 333 |
| Msa0776750 | AT3G29400.1 | 32.340 | 671 | 403 | 16 | 4 | 643 | 7 | 657 | 8.21e-94 | 303 |
| Msa0776750 | AT5G52350.1 | 33.909 | 463 | 291 | 4 | 176 | 635 | 129 | 579 | 5.63e-86 | 281 |
| Msa0776750 | AT2G39380.1 | 28.261 | 552 | 369 | 7 | 94 | 634 | 76 | 611 | 5.03e-77 | 258 |
| Msa0776750 | AT5G59730.1 | 28.783 | 608 | 367 | 14 | 63 | 634 | 22 | 599 | 9.81e-75 | 252 |
| Msa0776750 | AT5G59730.2 | 28.783 | 608 | 367 | 14 | 63 | 634 | 22 | 599 | 1.10e-74 | 252 |
| Msa0776750 | AT3G55150.1 | 28.545 | 550 | 370 | 8 | 94 | 634 | 76 | 611 | 2.68e-72 | 246 |
| Msa0776750 | AT5G61010.1 | 27.134 | 656 | 412 | 15 | 15 | 643 | 23 | 639 | 3.30e-72 | 245 |
| Msa0776750 | AT5G61010.2 | 27.134 | 656 | 412 | 15 | 15 | 643 | 23 | 639 | 3.30e-72 | 245 |
| Msa0776750 | AT1G07725.1 | 27.799 | 536 | 320 | 9 | 125 | 633 | 96 | 591 | 6.48e-72 | 244 |
| Msa0776750 | AT3G09530.1 | 26.547 | 614 | 415 | 9 | 35 | 633 | 10 | 602 | 2.03e-69 | 238 |
| Msa0776750 | AT2G28640.1 | 28.489 | 523 | 330 | 8 | 125 | 637 | 94 | 582 | 6.67e-68 | 233 |
| Msa0776750 | AT3G09520.1 | 28.164 | 561 | 363 | 10 | 89 | 632 | 68 | 605 | 1.86e-66 | 229 |
| Msa0776750 | AT2G28650.1 | 28.842 | 423 | 278 | 5 | 212 | 631 | 152 | 554 | 7.72e-53 | 191 |
| Msa0776750 | AT4G31540.1 | 25.775 | 516 | 335 | 9 | 135 | 642 | 190 | 665 | 1.44e-39 | 155 |
| Msa0776750 | AT1G51640.1 | 24.494 | 445 | 301 | 10 | 209 | 632 | 196 | 626 | 2.72e-25 | 111 |
Find 134 sgRNAs with CRISPR-Local
Find 304 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCAGGGTCCTTGTAAATTT+TGG | 0.099808 | 5_2:-55287600 | None:intergenic |
| TTTCATCTGATCATCCAATT+TGG | 0.193703 | 5_2:+55286436 | Msa0776750:CDS |
| CGAATGGTTGCCGGTGGATT+TGG | 0.193761 | 5_2:+55286843 | Msa0776750:CDS |
| TCCAGCTAAGGCGGGTGTTC+CGG | 0.218860 | 5_2:+55287367 | Msa0776750:CDS |
| GAAATTGAAAGATGGATTAA+AGG | 0.249788 | 5_2:+55286993 | Msa0776750:CDS |
| AAAACTCAATGATTTGTTTC+AGG | 0.259634 | 5_2:+55288066 | Msa0776750:CDS |
| AAAGCTGAAGATAGTGAATT+AGG | 0.282933 | 5_2:+55287668 | Msa0776750:CDS |
| TCCAAGAGCTTTCACAGCTT+TGG | 0.295611 | 5_2:+55286371 | Msa0776750:CDS |
| AGGAGAGTTTATCGAGATTA+GGG | 0.303056 | 5_2:+55286913 | Msa0776750:CDS |
| AATGGATCAATGCAACATAA+TGG | 0.314221 | 5_2:+55287806 | Msa0776750:CDS |
| TAAGGTGTTTGGGTTTCTTA+AGG | 0.322354 | 5_2:+55287775 | Msa0776750:CDS |
| TTTCTTAAGGTGGAGAATAA+TGG | 0.326928 | 5_2:+55287788 | Msa0776750:CDS |
| AACATTGCGTGACCTAATTT+CGG | 0.332839 | 5_2:+55287217 | Msa0776750:CDS |
| GCTGATAAATATATTAAGTA+TGG | 0.333613 | 5_2:+55288025 | Msa0776750:CDS |
| ACAACTCAAACTCCGAAATT+AGG | 0.336754 | 5_2:-55287229 | None:intergenic |
| ATGGATCAATGCAACATAAT+GGG | 0.338830 | 5_2:+55287807 | Msa0776750:CDS |
| TACAGATTTAGCTTCGCTTT+CGG | 0.343027 | 5_2:-55288111 | None:intergenic |
| TATCTTTGATGAACAACTTA+AGG | 0.343532 | 5_2:+55287910 | Msa0776750:CDS |
| AGCTCATGGAATAAGGTGTT+TGG | 0.350167 | 5_2:+55287764 | Msa0776750:CDS |
| TCAGCAGAGTCTGCCCAAAT+TGG | 0.354285 | 5_2:-55286450 | None:intergenic |
| TCAAAGAAGCTCATGGAATA+AGG | 0.361831 | 5_2:+55287757 | Msa0776750:CDS |
| GAATGGTTGCCGGTGGATTT+GGG | 0.370483 | 5_2:+55286844 | Msa0776750:CDS |
| AAGGCGGGTGTTCCGGGTGG+TGG | 0.371274 | 5_2:+55287374 | Msa0776750:CDS |
| GAGGAGAGTTTATCGAGATT+AGG | 0.373650 | 5_2:+55286912 | Msa0776750:CDS |
| TTCATCTGATCATCCAATTT+GGG | 0.376514 | 5_2:+55286437 | Msa0776750:CDS |
| TTCGTCTTTGTCAGTGCAAA+TGG | 0.381193 | 5_2:+55287535 | Msa0776750:CDS |
| GGAATGAAGCAATTACTATA+TGG | 0.386187 | 5_2:+55287282 | Msa0776750:CDS |
| TAGTTGCCGGAGAGAATTCT+TGG | 0.391094 | 5_2:+55286890 | Msa0776750:CDS |
| GAGCAAGTGTTTGAAGACTA+TGG | 0.392698 | 5_2:+55287464 | Msa0776750:CDS |
| CCCGGAACACCCGCCTTAGC+TGG | 0.393597 | 5_2:-55287368 | None:intergenic |
| GCTCATGGAATAAGGTGTTT+GGG | 0.397422 | 5_2:+55287765 | Msa0776750:CDS |
| TGCATCCTATCATCCATCTT+AGG | 0.400142 | 5_2:-55287506 | None:intergenic |
| ATTACTATATGGAAAAGGTT+GGG | 0.401522 | 5_2:+55287293 | Msa0776750:CDS |
| AGTGCAAATGGATTGGATTA+TGG | 0.404879 | 5_2:+55287547 | Msa0776750:CDS |
| ACAATTTCGTAATCCGTTAC+CGG | 0.411017 | 5_2:-55286768 | None:intergenic |
| AGCTTCTTTGATACTGCATA+TGG | 0.412400 | 5_2:-55287745 | None:intergenic |
| TTCATCACGTAACGTGTAAT+CGG | 0.419499 | 5_2:-55287404 | None:intergenic |
| CTTTGTCAGTGCAAATGGAT+TGG | 0.422697 | 5_2:+55287540 | Msa0776750:CDS |
| TTAGCTTCGCTTTCGGCTAC+CGG | 0.424223 | 5_2:-55288104 | None:intergenic |
| TTCGCAGATGCGGTTGCGAT+TGG | 0.427350 | 5_2:+55287149 | Msa0776750:CDS |
| TTTCAAAATGTTGCTGAAGT+TGG | 0.430084 | 5_2:+55287995 | Msa0776750:CDS |
| AAACTCAATGATTTGTTTCA+GGG | 0.430768 | 5_2:+55288067 | Msa0776750:CDS |
| TCCAAAGCTGTGAAAGCTCT+TGG | 0.431111 | 5_2:-55286372 | None:intergenic |
| CAGCCATGTTGTTATTATTG+TGG | 0.435420 | 5_2:-55286254 | None:intergenic |
| ATCGCGAAACGAATGGTTGC+CGG | 0.437422 | 5_2:+55286834 | Msa0776750:CDS |
| CGCATGTGTACAGTAGTTGC+CGG | 0.441409 | 5_2:+55286877 | Msa0776750:CDS |
| ATTATCCTAAGATGGATGAT+AGG | 0.458844 | 5_2:+55287501 | Msa0776750:CDS |
| AGGTGAAGAGGATCTGATTC+CGG | 0.459732 | 5_2:+55286737 | Msa0776750:CDS |
| TCTGATTCCGGTTGCGATGC+CGG | 0.465064 | 5_2:+55286749 | Msa0776750:CDS |
| TGCGATTGGAAGCCGGTCGC+CGG | 0.467580 | 5_2:+55287163 | Msa0776750:CDS |
| ACAATGAAATTTGCATAAGC+TGG | 0.471843 | 5_2:-55287968 | None:intergenic |
| CAGGGAAGCAGCGGATCAAC+CGG | 0.475342 | 5_2:+55288085 | Msa0776750:CDS |
| GGATGAGTTTCGTTCTCTCA+TGG | 0.480828 | 5_2:+55286611 | Msa0776750:CDS |
| CAAATCTTCTCAAATTTCGA+TGG | 0.480862 | 5_2:+55286288 | Msa0776750:CDS |
| TTACTATATGGAAAAGGTTG+GGG | 0.484440 | 5_2:+55287294 | Msa0776750:CDS |
| CGGTGTTTGATGATTTATGC+AGG | 0.484441 | 5_2:+55287870 | Msa0776750:CDS |
| GGTGTTTGGGTTTCTTAAGG+TGG | 0.489955 | 5_2:+55287778 | Msa0776750:CDS |
| TTGAAGATGAAATTGAAAGA+TGG | 0.490489 | 5_2:+55286985 | Msa0776750:CDS |
| AATTACTATATGGAAAAGGT+TGG | 0.493864 | 5_2:+55287292 | Msa0776750:CDS |
| ATTGAAGGATTATCCTAAGA+TGG | 0.495216 | 5_2:+55287493 | Msa0776750:CDS |
| ACCGTTTGATTCTGAAGAAG+AGG | 0.499752 | 5_2:+55286695 | Msa0776750:CDS |
| GCCGTACCGGAACAGCGATT+CGG | 0.500658 | 5_2:+55286665 | Msa0776750:CDS |
| TCCGGTTGCGATGCCGGTAA+CGG | 0.500704 | 5_2:+55286755 | Msa0776750:CDS |
| ATCTTAGGATAATCCTTCAA+TGG | 0.501748 | 5_2:-55287491 | None:intergenic |
| TCCTCTTCTTCAGAATCAAA+CGG | 0.503787 | 5_2:-55286696 | None:intergenic |
| AAGCAATTACTATATGGAAA+AGG | 0.507049 | 5_2:+55287288 | Msa0776750:CDS |
| TTGACTTAACGCCGCCGTAC+CGG | 0.507619 | 5_2:+55286652 | Msa0776750:CDS |
| AAGAAAACATAGCACAAAGC+AGG | 0.512116 | 5_2:-55287617 | None:intergenic |
| TTCGTGCTGCGTGTAGGTCT+AGG | 0.512500 | 5_2:+55287432 | Msa0776750:CDS |
| AGTTGGAGAATTTGATTCGA+AGG | 0.519933 | 5_2:+55287342 | Msa0776750:CDS |
| AGTGAGAGATTCGGCGGTCG+AGG | 0.522517 | 5_2:-55286410 | None:intergenic |
| ACCGAATCGCTGTTCCGGTA+CGG | 0.526372 | 5_2:-55286666 | None:intergenic |
| TGAGAAAGTCGCTGCGGTCG+AGG | 0.527276 | 5_2:+55286335 | Msa0776750:CDS |
| TGATTCTGAAGAAGAGGATG+AGG | 0.534419 | 5_2:+55286701 | Msa0776750:CDS |
| TATGCAGGGTTCAATCTACA+TGG | 0.536987 | 5_2:+55287885 | Msa0776750:CDS |
| GTTGGAGAATTTGATTCGAA+GGG | 0.538931 | 5_2:+55287343 | Msa0776750:CDS |
| TGCAGTATCAAAGAAGCTCA+TGG | 0.545663 | 5_2:+55287750 | Msa0776750:CDS |
| TCTTTCATGGAGGTTTGTAG+AGG | 0.546182 | 5_2:+55287104 | Msa0776750:CDS |
| TGTTCACAAAATGCAGTGGC+AGG | 0.547500 | 5_2:+55286959 | Msa0776750:CDS |
| GAAGAGGATGAGGAAATTGA+CGG | 0.549221 | 5_2:+55286711 | Msa0776750:CDS |
| TCGCATAATCGTCGCTCACT+CGG | 0.551165 | 5_2:-55287044 | None:intergenic |
| ATGCGGTTGCGATTGGAAGC+CGG | 0.551749 | 5_2:+55287156 | Msa0776750:CDS |
| GATTCGAAGGGATCCAGCTA+AGG | 0.552680 | 5_2:+55287355 | Msa0776750:CDS |
| TCACGAGATCGCGAAACGAA+TGG | 0.552800 | 5_2:+55286827 | Msa0776750:CDS |
| CTTATGCAAATTTCATTGTG+AGG | 0.557442 | 5_2:+55287972 | Msa0776750:CDS |
| TGGATTTATCACCGGTGAGG+TGG | 0.560283 | 5_2:-55286530 | None:intergenic |
| AGACTATGGACATCCATTGA+AGG | 0.560704 | 5_2:+55287478 | Msa0776750:CDS |
| ATGAAACGTAGTGAGAGATT+CGG | 0.561154 | 5_2:-55286419 | None:intergenic |
| CGAAGGGATCCAGCTAAGGC+GGG | 0.563108 | 5_2:+55287359 | Msa0776750:CDS |
| GTTGTTGAATTTCGCAGATG+CGG | 0.569479 | 5_2:+55287139 | Msa0776750:CDS |
| ATTACCTTCGTGCTGCGTGT+AGG | 0.569605 | 5_2:+55287426 | Msa0776750:CDS |
| TCGAAGGGATCCAGCTAAGG+CGG | 0.576472 | 5_2:+55287358 | Msa0776750:CDS |
| TTGGAAGCCGGTCGCCGGAG+CGG | 0.578483 | 5_2:+55287168 | Msa0776750:CDS |
| AATTGACGGTGGAGGTGAAG+AGG | 0.582467 | 5_2:+55286725 | Msa0776750:CDS |
| AGCTAAATCCAAAATTTACA+AGG | 0.584221 | 5_2:+55287592 | Msa0776750:CDS |
| GCGTGCAAGACACGTGGCGA+TGG | 0.587844 | 5_2:-55286550 | None:intergenic |
| GATGAGGAAATTGACGGTGG+AGG | 0.590732 | 5_2:+55286717 | Msa0776750:CDS |
| TCTCCTCCAAGAATTCTCTC+CGG | 0.592000 | 5_2:-55286896 | None:intergenic |
| GAGGATGAGGAAATTGACGG+TGG | 0.597078 | 5_2:+55286714 | Msa0776750:CDS |
| CACGTGTCTTGCACGCGCTG+AGG | 0.603781 | 5_2:+55286557 | Msa0776750:CDS |
| TTGCCGGAGAGAATTCTTGG+AGG | 0.606882 | 5_2:+55286893 | Msa0776750:CDS |
| GCAGAGTGGAACCACCTCAC+CGG | 0.613195 | 5_2:+55286519 | Msa0776750:CDS |
| GGTGTTTGATGATTTATGCA+GGG | 0.615103 | 5_2:+55287871 | Msa0776750:CDS |
| ACACTCTTTCCCAAATCCAC+CGG | 0.617998 | 5_2:-55286853 | None:intergenic |
| TGGATCAATGCAACATAATG+GGG | 0.624314 | 5_2:+55287808 | Msa0776750:CDS |
| TTTCGATGGAAGATTCTCGA+AGG | 0.631139 | 5_2:+55286302 | Msa0776750:CDS |
| AGAAAACATAGCACAAAGCA+GGG | 0.634160 | 5_2:-55287616 | None:intergenic |
| CGTGGCGATGGATTTATCAC+CGG | 0.638141 | 5_2:-55286538 | None:intergenic |
| GAGGTGGTTCCACTCTGCAA+CGG | 0.639466 | 5_2:-55286514 | None:intergenic |
| CTCAGCGCGTGCAAGACACG+TGG | 0.639873 | 5_2:-55286556 | None:intergenic |
| TACTATATGGAAAAGGTTGG+GGG | 0.642825 | 5_2:+55287295 | Msa0776750:CDS |
| GCGAAACGAATGGTTGCCGG+TGG | 0.645091 | 5_2:+55286837 | Msa0776750:CDS |
| ATCGGATGTAGTCCACCACC+CGG | 0.648283 | 5_2:-55287386 | None:intergenic |
| AACGAAACTCATCCTCAAGA+CGG | 0.651495 | 5_2:-55286602 | None:intergenic |
| GATTTGTTTCAGGGAAGCAG+CGG | 0.656597 | 5_2:+55288076 | Msa0776750:CDS |
| CGTTCTCTCATGGAACGCGG+TGG | 0.656643 | 5_2:+55286621 | Msa0776750:CDS |
| TGTGATCGATGCGTTACCGT+CGG | 0.659737 | 5_2:+55286788 | Msa0776750:CDS |
| CGATGGATTTATCACCGGTG+AGG | 0.664178 | 5_2:-55286533 | None:intergenic |
| AGAAGAGAAATTACTCGCTG+TGG | 0.664906 | 5_2:+55286206 | Msa0776750:CDS |
| TAGTAGCTTCCGTTGCAGAG+TGG | 0.667358 | 5_2:+55286505 | Msa0776750:CDS |
| TGGTAACAAGAGTTTCTCGA+TGG | 0.668574 | 5_2:-55287948 | None:intergenic |
| GTGTAGGTCTAGGCAGACAT+TGG | 0.668930 | 5_2:+55287442 | Msa0776750:CDS |
| ATATATTAAGTATGGAACAG+AGG | 0.672378 | 5_2:+55288033 | Msa0776750:CDS |
| TTTCGTTCTCTCATGGAACG+CGG | 0.674207 | 5_2:+55286618 | Msa0776750:CDS |
| GAATCGCTGTTCCGGTACGG+CGG | 0.676085 | 5_2:-55286663 | None:intergenic |
| AAGATGTTCACAAAATGCAG+TGG | 0.676259 | 5_2:+55286955 | Msa0776750:CDS |
| AACGGCGTCGAGAAAAGCAG+CGG | 0.676927 | 5_2:-55286475 | None:intergenic |
| GGAAGCTACTAAGTCGTCAA+CGG | 0.681900 | 5_2:-55286493 | None:intergenic |
| ATCAATATAGTGTGTCTCTG+AGG | 0.701815 | 5_2:+55287261 | Msa0776750:CDS |
| AAACGTAGTGAGAGATTCGG+CGG | 0.706086 | 5_2:-55286416 | None:intergenic |
| AGGCCACAATAATAACAACA+TGG | 0.711980 | 5_2:+55286251 | Msa0776750:CDS |
| GAAGCTGAAATCGTTCAACA+CGG | 0.721492 | 5_2:+55287850 | Msa0776750:CDS |
| TCTTTCTGAGAAAGTCGCTG+CGG | 0.726564 | 5_2:+55286329 | Msa0776750:CDS |
| TAGACCTACACGCAGCACGA+AGG | 0.738639 | 5_2:-55287430 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GCTGATAAATATATTAAGTA+TGG | + | chr5_2:55288025-55288044 | Msa0776750:CDS | 20.0% |
| !! | GCTGATAAATATATTAAGTA+TGG | + | chr5_2:55288025-55288044 | Msa0776750:CDS | 20.0% |
| ! | TTGAAGATGAAATTGAAAGA+TGG | + | chr5_2:55286985-55287004 | Msa0776750:CDS | 25.0% |
| !!! | GAAATTGAAAGATGGATTAA+AGG | + | chr5_2:55286993-55287012 | Msa0776750:CDS | 25.0% |
| ! | AAGCAATTACTATATGGAAA+AGG | + | chr5_2:55287288-55287307 | Msa0776750:CDS | 25.0% |
| ! | AATTACTATATGGAAAAGGT+TGG | + | chr5_2:55287292-55287311 | Msa0776750:CDS | 25.0% |
| ! | ATTACTATATGGAAAAGGTT+GGG | + | chr5_2:55287293-55287312 | Msa0776750:CDS | 25.0% |
| ! | AGCTAAATCCAAAATTTACA+AGG | + | chr5_2:55287592-55287611 | Msa0776750:CDS | 25.0% |
| !! | TTTTCTTGATGAATAATTGC+AGG | + | chr5_2:55287633-55287652 | Msa0776750:CDS | 25.0% |
| ! | TATCTTTGATGAACAACTTA+AGG | + | chr5_2:55287910-55287929 | Msa0776750:CDS | 25.0% |
| ! | ATATATTAAGTATGGAACAG+AGG | + | chr5_2:55288033-55288052 | Msa0776750:CDS | 25.0% |
| !!! | AAAACTCAATGATTTGTTTC+AGG | + | chr5_2:55288066-55288085 | Msa0776750:CDS | 25.0% |
| !!! | AAACTCAATGATTTGTTTCA+GGG | + | chr5_2:55288067-55288086 | Msa0776750:CDS | 25.0% |
| ! | TTGAAGATGAAATTGAAAGA+TGG | + | chr5_2:55286985-55287004 | Msa0776750:CDS | 25.0% |
| !!! | GAAATTGAAAGATGGATTAA+AGG | + | chr5_2:55286993-55287012 | Msa0776750:CDS | 25.0% |
| ! | AAGCAATTACTATATGGAAA+AGG | + | chr5_2:55287288-55287307 | Msa0776750:CDS | 25.0% |
| ! | AATTACTATATGGAAAAGGT+TGG | + | chr5_2:55287292-55287311 | Msa0776750:CDS | 25.0% |
| ! | ATTACTATATGGAAAAGGTT+GGG | + | chr5_2:55287293-55287312 | Msa0776750:CDS | 25.0% |
| ! | AGCTAAATCCAAAATTTACA+AGG | + | chr5_2:55287592-55287611 | Msa0776750:CDS | 25.0% |
| !! | TTTTCTTGATGAATAATTGC+AGG | + | chr5_2:55287633-55287652 | Msa0776750:CDS | 25.0% |
| ! | TATCTTTGATGAACAACTTA+AGG | + | chr5_2:55287910-55287929 | Msa0776750:CDS | 25.0% |
| ! | ATATATTAAGTATGGAACAG+AGG | + | chr5_2:55288033-55288052 | Msa0776750:CDS | 25.0% |
| !!! | AAAACTCAATGATTTGTTTC+AGG | + | chr5_2:55288066-55288085 | Msa0776750:CDS | 25.0% |
| !!! | AAACTCAATGATTTGTTTCA+GGG | + | chr5_2:55288067-55288086 | Msa0776750:CDS | 25.0% |
| CAAATCTTCTCAAATTTCGA+TGG | + | chr5_2:55286288-55286307 | Msa0776750:CDS | 30.0% | |
| TTTCATCTGATCATCCAATT+TGG | + | chr5_2:55286436-55286455 | Msa0776750:CDS | 30.0% | |
| TTCATCTGATCATCCAATTT+GGG | + | chr5_2:55286437-55286456 | Msa0776750:CDS | 30.0% | |
| GGAATGAAGCAATTACTATA+TGG | + | chr5_2:55287282-55287301 | Msa0776750:CDS | 30.0% | |
| TTACTATATGGAAAAGGTTG+GGG | + | chr5_2:55287294-55287313 | Msa0776750:CDS | 30.0% | |
| !!! | AGCAATTAGAGGCATTTTTA+TGG | + | chr5_2:55287319-55287338 | Msa0776750:CDS | 30.0% |
| ATCTTAGGATAATCCTTCAA+TGG | - | chr5_2:55287494-55287513 | None:intergenic | 30.0% | |
| ATTGAAGGATTATCCTAAGA+TGG | + | chr5_2:55287493-55287512 | Msa0776750:CDS | 30.0% | |
| ATTATCCTAAGATGGATGAT+AGG | + | chr5_2:55287501-55287520 | Msa0776750:CDS | 30.0% | |
| AAAGCTGAAGATAGTGAATT+AGG | + | chr5_2:55287668-55287687 | Msa0776750:CDS | 30.0% | |
| AAAAACACACTGCGAAAATT+CGG | + | chr5_2:55287717-55287736 | Msa0776750:CDS | 30.0% | |
| TTTCTTAAGGTGGAGAATAA+TGG | + | chr5_2:55287788-55287807 | Msa0776750:CDS | 30.0% | |
| AATGGATCAATGCAACATAA+TGG | + | chr5_2:55287806-55287825 | Msa0776750:CDS | 30.0% | |
| ATGGATCAATGCAACATAAT+GGG | + | chr5_2:55287807-55287826 | Msa0776750:CDS | 30.0% | |
| ACAATGAAATTTGCATAAGC+TGG | - | chr5_2:55287971-55287990 | None:intergenic | 30.0% | |
| CTTATGCAAATTTCATTGTG+AGG | + | chr5_2:55287972-55287991 | Msa0776750:CDS | 30.0% | |
| TTTCAAAATGTTGCTGAAGT+TGG | + | chr5_2:55287995-55288014 | Msa0776750:CDS | 30.0% | |
| CAAATCTTCTCAAATTTCGA+TGG | + | chr5_2:55286288-55286307 | Msa0776750:CDS | 30.0% | |
| TTTCATCTGATCATCCAATT+TGG | + | chr5_2:55286436-55286455 | Msa0776750:CDS | 30.0% | |
| TTCATCTGATCATCCAATTT+GGG | + | chr5_2:55286437-55286456 | Msa0776750:CDS | 30.0% | |
| GGAATGAAGCAATTACTATA+TGG | + | chr5_2:55287282-55287301 | Msa0776750:CDS | 30.0% | |
| TTACTATATGGAAAAGGTTG+GGG | + | chr5_2:55287294-55287313 | Msa0776750:CDS | 30.0% | |
| !!! | AGCAATTAGAGGCATTTTTA+TGG | + | chr5_2:55287319-55287338 | Msa0776750:CDS | 30.0% |
| ATCTTAGGATAATCCTTCAA+TGG | - | chr5_2:55287494-55287513 | None:intergenic | 30.0% | |
| ATTGAAGGATTATCCTAAGA+TGG | + | chr5_2:55287493-55287512 | Msa0776750:CDS | 30.0% | |
| ATTATCCTAAGATGGATGAT+AGG | + | chr5_2:55287501-55287520 | Msa0776750:CDS | 30.0% | |
| AAAGCTGAAGATAGTGAATT+AGG | + | chr5_2:55287668-55287687 | Msa0776750:CDS | 30.0% | |
| AAAAACACACTGCGAAAATT+CGG | + | chr5_2:55287717-55287736 | Msa0776750:CDS | 30.0% | |
| TTTCTTAAGGTGGAGAATAA+TGG | + | chr5_2:55287788-55287807 | Msa0776750:CDS | 30.0% | |
| AATGGATCAATGCAACATAA+TGG | + | chr5_2:55287806-55287825 | Msa0776750:CDS | 30.0% | |
| ATGGATCAATGCAACATAAT+GGG | + | chr5_2:55287807-55287826 | Msa0776750:CDS | 30.0% | |
| ACAATGAAATTTGCATAAGC+TGG | - | chr5_2:55287971-55287990 | None:intergenic | 30.0% | |
| CTTATGCAAATTTCATTGTG+AGG | + | chr5_2:55287972-55287991 | Msa0776750:CDS | 30.0% | |
| TTTCAAAATGTTGCTGAAGT+TGG | + | chr5_2:55287995-55288014 | Msa0776750:CDS | 30.0% | |
| AGGCCACAATAATAACAACA+TGG | + | chr5_2:55286251-55286270 | Msa0776750:CDS | 35.0% | |
| ! | CAGCCATGTTGTTATTATTG+TGG | - | chr5_2:55286257-55286276 | None:intergenic | 35.0% |
| ATGAAACGTAGTGAGAGATT+CGG | - | chr5_2:55286422-55286441 | None:intergenic | 35.0% | |
| TCCTCTTCTTCAGAATCAAA+CGG | - | chr5_2:55286699-55286718 | None:intergenic | 35.0% | |
| ACAATTTCGTAATCCGTTAC+CGG | - | chr5_2:55286771-55286790 | None:intergenic | 35.0% | |
| AGGAGAGTTTATCGAGATTA+GGG | + | chr5_2:55286913-55286932 | Msa0776750:CDS | 35.0% | |
| AAGATGTTCACAAAATGCAG+TGG | + | chr5_2:55286955-55286974 | Msa0776750:CDS | 35.0% | |
| ! | AGCTGCAGATTTTTCTTTCA+TGG | + | chr5_2:55287091-55287110 | Msa0776750:CDS | 35.0% |
| ! | TGCAGATTTTTCTTTCATGG+AGG | + | chr5_2:55287094-55287113 | Msa0776750:CDS | 35.0% |
| ! | AGAATTTTAAACAACCGCTC+CGG | - | chr5_2:55287185-55287204 | None:intergenic | 35.0% |
| AACATTGCGTGACCTAATTT+CGG | + | chr5_2:55287217-55287236 | Msa0776750:CDS | 35.0% | |
| ACAACTCAAACTCCGAAATT+AGG | - | chr5_2:55287232-55287251 | None:intergenic | 35.0% | |
| ATCAATATAGTGTGTCTCTG+AGG | + | chr5_2:55287261-55287280 | Msa0776750:CDS | 35.0% | |
| TACTATATGGAAAAGGTTGG+GGG | + | chr5_2:55287295-55287314 | Msa0776750:CDS | 35.0% | |
| !!! | TAGAGGCATTTTTATGGAGT+TGG | + | chr5_2:55287325-55287344 | Msa0776750:CDS | 35.0% |
| ! | AGTTGGAGAATTTGATTCGA+AGG | + | chr5_2:55287342-55287361 | Msa0776750:CDS | 35.0% |
| ! | GTTGGAGAATTTGATTCGAA+GGG | + | chr5_2:55287343-55287362 | Msa0776750:CDS | 35.0% |
| TTCATCACGTAACGTGTAAT+CGG | - | chr5_2:55287407-55287426 | None:intergenic | 35.0% | |
| !! | AGTGCAAATGGATTGGATTA+TGG | + | chr5_2:55287547-55287566 | Msa0776750:CDS | 35.0% |
| AGAAAACATAGCACAAAGCA+GGG | - | chr5_2:55287619-55287638 | None:intergenic | 35.0% | |
| AAGAAAACATAGCACAAAGC+AGG | - | chr5_2:55287620-55287639 | None:intergenic | 35.0% | |
| !!! | AGTGAATTAGGAGCACTTTT+AGG | + | chr5_2:55287680-55287699 | Msa0776750:CDS | 35.0% |
| AGCTTCTTTGATACTGCATA+TGG | - | chr5_2:55287748-55287767 | None:intergenic | 35.0% | |
| TCAAAGAAGCTCATGGAATA+AGG | + | chr5_2:55287757-55287776 | Msa0776750:CDS | 35.0% | |
| ! | TAAGGTGTTTGGGTTTCTTA+AGG | + | chr5_2:55287775-55287794 | Msa0776750:CDS | 35.0% |
| TGGATCAATGCAACATAATG+GGG | + | chr5_2:55287808-55287827 | Msa0776750:CDS | 35.0% | |
| ! | GGTGTTTGATGATTTATGCA+GGG | + | chr5_2:55287871-55287890 | Msa0776750:CDS | 35.0% |
| AGGCCACAATAATAACAACA+TGG | + | chr5_2:55286251-55286270 | Msa0776750:CDS | 35.0% | |
| ! | CAGCCATGTTGTTATTATTG+TGG | - | chr5_2:55286257-55286276 | None:intergenic | 35.0% |
| ATGAAACGTAGTGAGAGATT+CGG | - | chr5_2:55286422-55286441 | None:intergenic | 35.0% | |
| TCCTCTTCTTCAGAATCAAA+CGG | - | chr5_2:55286699-55286718 | None:intergenic | 35.0% | |
| ACAATTTCGTAATCCGTTAC+CGG | - | chr5_2:55286771-55286790 | None:intergenic | 35.0% | |
| AGGAGAGTTTATCGAGATTA+GGG | + | chr5_2:55286913-55286932 | Msa0776750:CDS | 35.0% | |
| AAGATGTTCACAAAATGCAG+TGG | + | chr5_2:55286955-55286974 | Msa0776750:CDS | 35.0% | |
| ! | AGCTGCAGATTTTTCTTTCA+TGG | + | chr5_2:55287091-55287110 | Msa0776750:CDS | 35.0% |
| ! | TGCAGATTTTTCTTTCATGG+AGG | + | chr5_2:55287094-55287113 | Msa0776750:CDS | 35.0% |
| ! | AGAATTTTAAACAACCGCTC+CGG | - | chr5_2:55287185-55287204 | None:intergenic | 35.0% |
| AACATTGCGTGACCTAATTT+CGG | + | chr5_2:55287217-55287236 | Msa0776750:CDS | 35.0% | |
| ACAACTCAAACTCCGAAATT+AGG | - | chr5_2:55287232-55287251 | None:intergenic | 35.0% | |
| ATCAATATAGTGTGTCTCTG+AGG | + | chr5_2:55287261-55287280 | Msa0776750:CDS | 35.0% | |
| TACTATATGGAAAAGGTTGG+GGG | + | chr5_2:55287295-55287314 | Msa0776750:CDS | 35.0% | |
| !!! | TAGAGGCATTTTTATGGAGT+TGG | + | chr5_2:55287325-55287344 | Msa0776750:CDS | 35.0% |
| ! | AGTTGGAGAATTTGATTCGA+AGG | + | chr5_2:55287342-55287361 | Msa0776750:CDS | 35.0% |
| ! | GTTGGAGAATTTGATTCGAA+GGG | + | chr5_2:55287343-55287362 | Msa0776750:CDS | 35.0% |
| TTCATCACGTAACGTGTAAT+CGG | - | chr5_2:55287407-55287426 | None:intergenic | 35.0% | |
| !! | AGTGCAAATGGATTGGATTA+TGG | + | chr5_2:55287547-55287566 | Msa0776750:CDS | 35.0% |
| AGAAAACATAGCACAAAGCA+GGG | - | chr5_2:55287619-55287638 | None:intergenic | 35.0% | |
| AAGAAAACATAGCACAAAGC+AGG | - | chr5_2:55287620-55287639 | None:intergenic | 35.0% | |
| !!! | AGTGAATTAGGAGCACTTTT+AGG | + | chr5_2:55287680-55287699 | Msa0776750:CDS | 35.0% |
| AGCTTCTTTGATACTGCATA+TGG | - | chr5_2:55287748-55287767 | None:intergenic | 35.0% | |
| TCAAAGAAGCTCATGGAATA+AGG | + | chr5_2:55287757-55287776 | Msa0776750:CDS | 35.0% | |
| ! | TAAGGTGTTTGGGTTTCTTA+AGG | + | chr5_2:55287775-55287794 | Msa0776750:CDS | 35.0% |
| TGGATCAATGCAACATAATG+GGG | + | chr5_2:55287808-55287827 | Msa0776750:CDS | 35.0% | |
| ! | GGTGTTTGATGATTTATGCA+GGG | + | chr5_2:55287871-55287890 | Msa0776750:CDS | 35.0% |
| AGAAGAGAAATTACTCGCTG+TGG | + | chr5_2:55286206-55286225 | Msa0776750:CDS | 40.0% | |
| TTTCGATGGAAGATTCTCGA+AGG | + | chr5_2:55286302-55286321 | Msa0776750:CDS | 40.0% | |
| AACGAAACTCATCCTCAAGA+CGG | - | chr5_2:55286605-55286624 | None:intergenic | 40.0% | |
| ! | ACCGTTTGATTCTGAAGAAG+AGG | + | chr5_2:55286695-55286714 | Msa0776750:CDS | 40.0% |
| ! | TGATTCTGAAGAAGAGGATG+AGG | + | chr5_2:55286701-55286720 | Msa0776750:CDS | 40.0% |
| GAAGAGGATGAGGAAATTGA+CGG | + | chr5_2:55286711-55286730 | Msa0776750:CDS | 40.0% | |
| GAGGAGAGTTTATCGAGATT+AGG | + | chr5_2:55286912-55286931 | Msa0776750:CDS | 40.0% | |
| !!! | TTATGCGATCGCGTGTTTTT+TGG | + | chr5_2:55287059-55287078 | Msa0776750:CDS | 40.0% |
| TCTTTCATGGAGGTTTGTAG+AGG | + | chr5_2:55287104-55287123 | Msa0776750:CDS | 40.0% | |
| GTTGTTGAATTTCGCAGATG+CGG | + | chr5_2:55287139-55287158 | Msa0776750:CDS | 40.0% | |
| GAGCAAGTGTTTGAAGACTA+TGG | + | chr5_2:55287464-55287483 | Msa0776750:CDS | 40.0% | |
| AGACTATGGACATCCATTGA+AGG | + | chr5_2:55287478-55287497 | Msa0776750:CDS | 40.0% | |
| TGCATCCTATCATCCATCTT+AGG | - | chr5_2:55287509-55287528 | None:intergenic | 40.0% | |
| TTCGTCTTTGTCAGTGCAAA+TGG | + | chr5_2:55287535-55287554 | Msa0776750:CDS | 40.0% | |
| CTTTGTCAGTGCAAATGGAT+TGG | + | chr5_2:55287540-55287559 | Msa0776750:CDS | 40.0% | |
| ! | AGCAGGGTCCTTGTAAATTT+TGG | - | chr5_2:55287603-55287622 | None:intergenic | 40.0% |
| !! | GAGCACTTTTAGGTGATGAT+TGG | + | chr5_2:55287690-55287709 | Msa0776750:CDS | 40.0% |
| TGCAGTATCAAAGAAGCTCA+TGG | + | chr5_2:55287750-55287769 | Msa0776750:CDS | 40.0% | |
| ! | AGCTCATGGAATAAGGTGTT+TGG | + | chr5_2:55287764-55287783 | Msa0776750:CDS | 40.0% |
| ! | GCTCATGGAATAAGGTGTTT+GGG | + | chr5_2:55287765-55287784 | Msa0776750:CDS | 40.0% |
| GAAGCTGAAATCGTTCAACA+CGG | + | chr5_2:55287850-55287869 | Msa0776750:CDS | 40.0% | |
| ! | CGGTGTTTGATGATTTATGC+AGG | + | chr5_2:55287870-55287889 | Msa0776750:CDS | 40.0% |
| TATGCAGGGTTCAATCTACA+TGG | + | chr5_2:55287885-55287904 | Msa0776750:CDS | 40.0% | |
| TGGTAACAAGAGTTTCTCGA+TGG | - | chr5_2:55287951-55287970 | None:intergenic | 40.0% | |
| AGAAGAGAAATTACTCGCTG+TGG | + | chr5_2:55286206-55286225 | Msa0776750:CDS | 40.0% | |
| TTTCGATGGAAGATTCTCGA+AGG | + | chr5_2:55286302-55286321 | Msa0776750:CDS | 40.0% | |
| AACGAAACTCATCCTCAAGA+CGG | - | chr5_2:55286605-55286624 | None:intergenic | 40.0% | |
| ! | ACCGTTTGATTCTGAAGAAG+AGG | + | chr5_2:55286695-55286714 | Msa0776750:CDS | 40.0% |
| ! | TGATTCTGAAGAAGAGGATG+AGG | + | chr5_2:55286701-55286720 | Msa0776750:CDS | 40.0% |
| GAAGAGGATGAGGAAATTGA+CGG | + | chr5_2:55286711-55286730 | Msa0776750:CDS | 40.0% | |
| GAGGAGAGTTTATCGAGATT+AGG | + | chr5_2:55286912-55286931 | Msa0776750:CDS | 40.0% | |
| !!! | TTATGCGATCGCGTGTTTTT+TGG | + | chr5_2:55287059-55287078 | Msa0776750:CDS | 40.0% |
| TCTTTCATGGAGGTTTGTAG+AGG | + | chr5_2:55287104-55287123 | Msa0776750:CDS | 40.0% | |
| GTTGTTGAATTTCGCAGATG+CGG | + | chr5_2:55287139-55287158 | Msa0776750:CDS | 40.0% | |
| GAGCAAGTGTTTGAAGACTA+TGG | + | chr5_2:55287464-55287483 | Msa0776750:CDS | 40.0% | |
| AGACTATGGACATCCATTGA+AGG | + | chr5_2:55287478-55287497 | Msa0776750:CDS | 40.0% | |
| TGCATCCTATCATCCATCTT+AGG | - | chr5_2:55287509-55287528 | None:intergenic | 40.0% | |
| TTCGTCTTTGTCAGTGCAAA+TGG | + | chr5_2:55287535-55287554 | Msa0776750:CDS | 40.0% | |
| CTTTGTCAGTGCAAATGGAT+TGG | + | chr5_2:55287540-55287559 | Msa0776750:CDS | 40.0% | |
| ! | AGCAGGGTCCTTGTAAATTT+TGG | - | chr5_2:55287603-55287622 | None:intergenic | 40.0% |
| !! | GAGCACTTTTAGGTGATGAT+TGG | + | chr5_2:55287690-55287709 | Msa0776750:CDS | 40.0% |
| TGCAGTATCAAAGAAGCTCA+TGG | + | chr5_2:55287750-55287769 | Msa0776750:CDS | 40.0% | |
| ! | AGCTCATGGAATAAGGTGTT+TGG | + | chr5_2:55287764-55287783 | Msa0776750:CDS | 40.0% |
| ! | GCTCATGGAATAAGGTGTTT+GGG | + | chr5_2:55287765-55287784 | Msa0776750:CDS | 40.0% |
| GAAGCTGAAATCGTTCAACA+CGG | + | chr5_2:55287850-55287869 | Msa0776750:CDS | 40.0% | |
| ! | CGGTGTTTGATGATTTATGC+AGG | + | chr5_2:55287870-55287889 | Msa0776750:CDS | 40.0% |
| TATGCAGGGTTCAATCTACA+TGG | + | chr5_2:55287885-55287904 | Msa0776750:CDS | 40.0% | |
| TGGTAACAAGAGTTTCTCGA+TGG | - | chr5_2:55287951-55287970 | None:intergenic | 40.0% | |
| CGTCACATAGCAAAAACGCT+AGG | + | chr5_2:55286231-55286250 | Msa0776750:CDS | 45.0% | |
| ! | TCTTTCTGAGAAAGTCGCTG+CGG | + | chr5_2:55286329-55286348 | Msa0776750:CDS | 45.0% |
| TCCAAGAGCTTTCACAGCTT+TGG | + | chr5_2:55286371-55286390 | Msa0776750:CDS | 45.0% | |
| TCCAAAGCTGTGAAAGCTCT+TGG | - | chr5_2:55286375-55286394 | None:intergenic | 45.0% | |
| AAACGTAGTGAGAGATTCGG+CGG | - | chr5_2:55286419-55286438 | None:intergenic | 45.0% | |
| GGAAGCTACTAAGTCGTCAA+CGG | - | chr5_2:55286496-55286515 | None:intergenic | 45.0% | |
| GGATGAGTTTCGTTCTCTCA+TGG | + | chr5_2:55286611-55286630 | Msa0776750:CDS | 45.0% | |
| TTTCGTTCTCTCATGGAACG+CGG | + | chr5_2:55286618-55286637 | Msa0776750:CDS | 45.0% | |
| AATTCACCGAATCGCTGTTC+CGG | - | chr5_2:55286674-55286693 | None:intergenic | 45.0% | |
| AGGTGAAGAGGATCTGATTC+CGG | + | chr5_2:55286737-55286756 | Msa0776750:CDS | 45.0% | |
| ACACTCTTTCCCAAATCCAC+CGG | - | chr5_2:55286856-55286875 | None:intergenic | 45.0% | |
| TAGTTGCCGGAGAGAATTCT+TGG | + | chr5_2:55286890-55286909 | Msa0776750:CDS | 45.0% | |
| TCTCCTCCAAGAATTCTCTC+CGG | - | chr5_2:55286899-55286918 | None:intergenic | 45.0% | |
| TGTTCACAAAATGCAGTGGC+AGG | + | chr5_2:55286959-55286978 | Msa0776750:CDS | 45.0% | |
| ! | GGTGTTTGGGTTTCTTAAGG+TGG | + | chr5_2:55287778-55287797 | Msa0776750:CDS | 45.0% |
| ! | GATTTGTTTCAGGGAAGCAG+CGG | + | chr5_2:55288076-55288095 | Msa0776750:CDS | 45.0% |
| CGTCACATAGCAAAAACGCT+AGG | + | chr5_2:55286231-55286250 | Msa0776750:CDS | 45.0% | |
| ! | TCTTTCTGAGAAAGTCGCTG+CGG | + | chr5_2:55286329-55286348 | Msa0776750:CDS | 45.0% |
| TCCAAGAGCTTTCACAGCTT+TGG | + | chr5_2:55286371-55286390 | Msa0776750:CDS | 45.0% | |
| TCCAAAGCTGTGAAAGCTCT+TGG | - | chr5_2:55286375-55286394 | None:intergenic | 45.0% | |
| AAACGTAGTGAGAGATTCGG+CGG | - | chr5_2:55286419-55286438 | None:intergenic | 45.0% | |
| GGAAGCTACTAAGTCGTCAA+CGG | - | chr5_2:55286496-55286515 | None:intergenic | 45.0% | |
| GGATGAGTTTCGTTCTCTCA+TGG | + | chr5_2:55286611-55286630 | Msa0776750:CDS | 45.0% | |
| TTTCGTTCTCTCATGGAACG+CGG | + | chr5_2:55286618-55286637 | Msa0776750:CDS | 45.0% | |
| AATTCACCGAATCGCTGTTC+CGG | - | chr5_2:55286674-55286693 | None:intergenic | 45.0% | |
| AGGTGAAGAGGATCTGATTC+CGG | + | chr5_2:55286737-55286756 | Msa0776750:CDS | 45.0% | |
| ACACTCTTTCCCAAATCCAC+CGG | - | chr5_2:55286856-55286875 | None:intergenic | 45.0% | |
| TAGTTGCCGGAGAGAATTCT+TGG | + | chr5_2:55286890-55286909 | Msa0776750:CDS | 45.0% | |
| TCTCCTCCAAGAATTCTCTC+CGG | - | chr5_2:55286899-55286918 | None:intergenic | 45.0% | |
| TGTTCACAAAATGCAGTGGC+AGG | + | chr5_2:55286959-55286978 | Msa0776750:CDS | 45.0% | |
| ! | GGTGTTTGGGTTTCTTAAGG+TGG | + | chr5_2:55287778-55287797 | Msa0776750:CDS | 45.0% |
| ! | GATTTGTTTCAGGGAAGCAG+CGG | + | chr5_2:55288076-55288095 | Msa0776750:CDS | 45.0% |
| TCAGCAGAGTCTGCCCAAAT+TGG | - | chr5_2:55286453-55286472 | None:intergenic | 50.0% | |
| TAGTAGCTTCCGTTGCAGAG+TGG | + | chr5_2:55286505-55286524 | Msa0776750:CDS | 50.0% | |
| TGGATTTATCACCGGTGAGG+TGG | - | chr5_2:55286533-55286552 | None:intergenic | 50.0% | |
| ! | CGATGGATTTATCACCGGTG+AGG | - | chr5_2:55286536-55286555 | None:intergenic | 50.0% |
| ! | CGTGGCGATGGATTTATCAC+CGG | - | chr5_2:55286541-55286560 | None:intergenic | 50.0% |
| ACACGCTATGTTCCGTCTTG+AGG | + | chr5_2:55286590-55286609 | Msa0776750:CDS | 50.0% | |
| GAGGATGAGGAAATTGACGG+TGG | + | chr5_2:55286714-55286733 | Msa0776750:CDS | 50.0% | |
| GATGAGGAAATTGACGGTGG+AGG | + | chr5_2:55286717-55286736 | Msa0776750:CDS | 50.0% | |
| AATTGACGGTGGAGGTGAAG+AGG | + | chr5_2:55286725-55286744 | Msa0776750:CDS | 50.0% | |
| TGTGATCGATGCGTTACCGT+CGG | + | chr5_2:55286788-55286807 | Msa0776750:CDS | 50.0% | |
| AGATCGTTAATCGTCGCCGA+CGG | - | chr5_2:55286807-55286826 | None:intergenic | 50.0% | |
| TCACGAGATCGCGAAACGAA+TGG | + | chr5_2:55286827-55286846 | Msa0776750:CDS | 50.0% | |
| ATCGCGAAACGAATGGTTGC+CGG | + | chr5_2:55286834-55286853 | Msa0776750:CDS | 50.0% | |
| ! | GAATGGTTGCCGGTGGATTT+GGG | + | chr5_2:55286844-55286863 | Msa0776750:CDS | 50.0% |
| CGCATGTGTACAGTAGTTGC+CGG | + | chr5_2:55286877-55286896 | Msa0776750:CDS | 50.0% | |
| TTGCCGGAGAGAATTCTTGG+AGG | + | chr5_2:55286893-55286912 | Msa0776750:CDS | 50.0% | |
| TCGCATAATCGTCGCTCACT+CGG | - | chr5_2:55287047-55287066 | None:intergenic | 50.0% | |
| AGGTTGGGGGAAGCAATTAG+AGG | + | chr5_2:55287308-55287327 | Msa0776750:CDS | 50.0% | |
| GATTCGAAGGGATCCAGCTA+AGG | + | chr5_2:55287355-55287374 | Msa0776750:CDS | 50.0% | |
| ATTACCTTCGTGCTGCGTGT+AGG | + | chr5_2:55287426-55287445 | Msa0776750:CDS | 50.0% | |
| GTGTAGGTCTAGGCAGACAT+TGG | + | chr5_2:55287442-55287461 | Msa0776750:CDS | 50.0% | |
| TTAGCTTCGCTTTCGGCTAC+CGG | - | chr5_2:55288107-55288126 | None:intergenic | 50.0% | |
| TCAGCAGAGTCTGCCCAAAT+TGG | - | chr5_2:55286453-55286472 | None:intergenic | 50.0% | |
| TAGTAGCTTCCGTTGCAGAG+TGG | + | chr5_2:55286505-55286524 | Msa0776750:CDS | 50.0% | |
| TGGATTTATCACCGGTGAGG+TGG | - | chr5_2:55286533-55286552 | None:intergenic | 50.0% | |
| ! | CGATGGATTTATCACCGGTG+AGG | - | chr5_2:55286536-55286555 | None:intergenic | 50.0% |
| ! | CGTGGCGATGGATTTATCAC+CGG | - | chr5_2:55286541-55286560 | None:intergenic | 50.0% |
| ACACGCTATGTTCCGTCTTG+AGG | + | chr5_2:55286590-55286609 | Msa0776750:CDS | 50.0% | |
| GAGGATGAGGAAATTGACGG+TGG | + | chr5_2:55286714-55286733 | Msa0776750:CDS | 50.0% | |
| GATGAGGAAATTGACGGTGG+AGG | + | chr5_2:55286717-55286736 | Msa0776750:CDS | 50.0% | |
| AATTGACGGTGGAGGTGAAG+AGG | + | chr5_2:55286725-55286744 | Msa0776750:CDS | 50.0% | |
| TGTGATCGATGCGTTACCGT+CGG | + | chr5_2:55286788-55286807 | Msa0776750:CDS | 50.0% | |
| AGATCGTTAATCGTCGCCGA+CGG | - | chr5_2:55286807-55286826 | None:intergenic | 50.0% | |
| TCACGAGATCGCGAAACGAA+TGG | + | chr5_2:55286827-55286846 | Msa0776750:CDS | 50.0% | |
| ATCGCGAAACGAATGGTTGC+CGG | + | chr5_2:55286834-55286853 | Msa0776750:CDS | 50.0% | |
| ! | GAATGGTTGCCGGTGGATTT+GGG | + | chr5_2:55286844-55286863 | Msa0776750:CDS | 50.0% |
| CGCATGTGTACAGTAGTTGC+CGG | + | chr5_2:55286877-55286896 | Msa0776750:CDS | 50.0% | |
| TTGCCGGAGAGAATTCTTGG+AGG | + | chr5_2:55286893-55286912 | Msa0776750:CDS | 50.0% | |
| TCGCATAATCGTCGCTCACT+CGG | - | chr5_2:55287047-55287066 | None:intergenic | 50.0% | |
| AGGTTGGGGGAAGCAATTAG+AGG | + | chr5_2:55287308-55287327 | Msa0776750:CDS | 50.0% | |
| GATTCGAAGGGATCCAGCTA+AGG | + | chr5_2:55287355-55287374 | Msa0776750:CDS | 50.0% | |
| ATTACCTTCGTGCTGCGTGT+AGG | + | chr5_2:55287426-55287445 | Msa0776750:CDS | 50.0% | |
| GTGTAGGTCTAGGCAGACAT+TGG | + | chr5_2:55287442-55287461 | Msa0776750:CDS | 50.0% | |
| TTAGCTTCGCTTTCGGCTAC+CGG | - | chr5_2:55288107-55288126 | None:intergenic | 50.0% | |
| ! | AACGGCGTCGAGAAAAGCAG+CGG | - | chr5_2:55286478-55286497 | None:intergenic | 55.0% |
| GAGGTGGTTCCACTCTGCAA+CGG | - | chr5_2:55286517-55286536 | None:intergenic | 55.0% | |
| TTGACTTAACGCCGCCGTAC+CGG | + | chr5_2:55286652-55286671 | Msa0776750:CDS | 55.0% | |
| ACCGAATCGCTGTTCCGGTA+CGG | - | chr5_2:55286669-55286688 | None:intergenic | 55.0% | |
| TCTGATTCCGGTTGCGATGC+CGG | + | chr5_2:55286749-55286768 | Msa0776750:CDS | 55.0% | |
| ! | CGAATGGTTGCCGGTGGATT+TGG | + | chr5_2:55286843-55286862 | Msa0776750:CDS | 55.0% |
| TTCGCAGATGCGGTTGCGAT+TGG | + | chr5_2:55287149-55287168 | Msa0776750:CDS | 55.0% | |
| ATGCGGTTGCGATTGGAAGC+CGG | + | chr5_2:55287156-55287175 | Msa0776750:CDS | 55.0% | |
| TCGAAGGGATCCAGCTAAGG+CGG | + | chr5_2:55287358-55287377 | Msa0776750:CDS | 55.0% | |
| ATCGGATGTAGTCCACCACC+CGG | - | chr5_2:55287389-55287408 | None:intergenic | 55.0% | |
| TAGACCTACACGCAGCACGA+AGG | - | chr5_2:55287433-55287452 | None:intergenic | 55.0% | |
| TTCGTGCTGCGTGTAGGTCT+AGG | + | chr5_2:55287432-55287451 | Msa0776750:CDS | 55.0% | |
| ! | AACGGCGTCGAGAAAAGCAG+CGG | - | chr5_2:55286478-55286497 | None:intergenic | 55.0% |
| GAGGTGGTTCCACTCTGCAA+CGG | - | chr5_2:55286517-55286536 | None:intergenic | 55.0% | |
| TTGACTTAACGCCGCCGTAC+CGG | + | chr5_2:55286652-55286671 | Msa0776750:CDS | 55.0% | |
| ACCGAATCGCTGTTCCGGTA+CGG | - | chr5_2:55286669-55286688 | None:intergenic | 55.0% | |
| TCTGATTCCGGTTGCGATGC+CGG | + | chr5_2:55286749-55286768 | Msa0776750:CDS | 55.0% | |
| ! | CGAATGGTTGCCGGTGGATT+TGG | + | chr5_2:55286843-55286862 | Msa0776750:CDS | 55.0% |
| TTCGCAGATGCGGTTGCGAT+TGG | + | chr5_2:55287149-55287168 | Msa0776750:CDS | 55.0% | |
| ATGCGGTTGCGATTGGAAGC+CGG | + | chr5_2:55287156-55287175 | Msa0776750:CDS | 55.0% | |
| TCGAAGGGATCCAGCTAAGG+CGG | + | chr5_2:55287358-55287377 | Msa0776750:CDS | 55.0% | |
| ATCGGATGTAGTCCACCACC+CGG | - | chr5_2:55287389-55287408 | None:intergenic | 55.0% | |
| TAGACCTACACGCAGCACGA+AGG | - | chr5_2:55287433-55287452 | None:intergenic | 55.0% | |
| TTCGTGCTGCGTGTAGGTCT+AGG | + | chr5_2:55287432-55287451 | Msa0776750:CDS | 55.0% | |
| TGAGAAAGTCGCTGCGGTCG+AGG | + | chr5_2:55286335-55286354 | Msa0776750:CDS | 60.0% | |
| AGTGAGAGATTCGGCGGTCG+AGG | - | chr5_2:55286413-55286432 | None:intergenic | 60.0% | |
| GCAGAGTGGAACCACCTCAC+CGG | + | chr5_2:55286519-55286538 | Msa0776750:CDS | 60.0% | |
| CGTTCTCTCATGGAACGCGG+TGG | + | chr5_2:55286621-55286640 | Msa0776750:CDS | 60.0% | |
| GAATCGCTGTTCCGGTACGG+CGG | - | chr5_2:55286666-55286685 | None:intergenic | 60.0% | |
| GCCGTACCGGAACAGCGATT+CGG | + | chr5_2:55286665-55286684 | Msa0776750:CDS | 60.0% | |
| TCCGGTTGCGATGCCGGTAA+CGG | + | chr5_2:55286755-55286774 | Msa0776750:CDS | 60.0% | |
| TCCGTTACCGGCATCGCAAC+CGG | - | chr5_2:55286759-55286778 | None:intergenic | 60.0% | |
| GCGAAACGAATGGTTGCCGG+TGG | + | chr5_2:55286837-55286856 | Msa0776750:CDS | 60.0% | |
| TAAACAACCGCTCCGGCGAC+CGG | - | chr5_2:55287178-55287197 | None:intergenic | 60.0% | |
| CGAAGGGATCCAGCTAAGGC+GGG | + | chr5_2:55287359-55287378 | Msa0776750:CDS | 60.0% | |
| TCCAGCTAAGGCGGGTGTTC+CGG | + | chr5_2:55287367-55287386 | Msa0776750:CDS | 60.0% | |
| CAGGGAAGCAGCGGATCAAC+CGG | + | chr5_2:55288085-55288104 | Msa0776750:CDS | 60.0% | |
| TGAGAAAGTCGCTGCGGTCG+AGG | + | chr5_2:55286335-55286354 | Msa0776750:CDS | 60.0% | |
| AGTGAGAGATTCGGCGGTCG+AGG | - | chr5_2:55286413-55286432 | None:intergenic | 60.0% | |
| GCAGAGTGGAACCACCTCAC+CGG | + | chr5_2:55286519-55286538 | Msa0776750:CDS | 60.0% | |
| CGTTCTCTCATGGAACGCGG+TGG | + | chr5_2:55286621-55286640 | Msa0776750:CDS | 60.0% | |
| GAATCGCTGTTCCGGTACGG+CGG | - | chr5_2:55286666-55286685 | None:intergenic | 60.0% | |
| GCCGTACCGGAACAGCGATT+CGG | + | chr5_2:55286665-55286684 | Msa0776750:CDS | 60.0% | |
| TCCGGTTGCGATGCCGGTAA+CGG | + | chr5_2:55286755-55286774 | Msa0776750:CDS | 60.0% | |
| TCCGTTACCGGCATCGCAAC+CGG | - | chr5_2:55286759-55286778 | None:intergenic | 60.0% | |
| GCGAAACGAATGGTTGCCGG+TGG | + | chr5_2:55286837-55286856 | Msa0776750:CDS | 60.0% | |
| TAAACAACCGCTCCGGCGAC+CGG | - | chr5_2:55287178-55287197 | None:intergenic | 60.0% | |
| CGAAGGGATCCAGCTAAGGC+GGG | + | chr5_2:55287359-55287378 | Msa0776750:CDS | 60.0% | |
| TCCAGCTAAGGCGGGTGTTC+CGG | + | chr5_2:55287367-55287386 | Msa0776750:CDS | 60.0% | |
| CAGGGAAGCAGCGGATCAAC+CGG | + | chr5_2:55288085-55288104 | Msa0776750:CDS | 60.0% | |
| GCGTGCAAGACACGTGGCGA+TGG | - | chr5_2:55286553-55286572 | None:intergenic | 65.0% | |
| CTCAGCGCGTGCAAGACACG+TGG | - | chr5_2:55286559-55286578 | None:intergenic | 65.0% | |
| CACGTGTCTTGCACGCGCTG+AGG | + | chr5_2:55286557-55286576 | Msa0776750:CDS | 65.0% | |
| TGCGATTGGAAGCCGGTCGC+CGG | + | chr5_2:55287163-55287182 | Msa0776750:CDS | 65.0% | |
| CCAGCTAAGGCGGGTGTTCC+GGG | + | chr5_2:55287368-55287387 | Msa0776750:CDS | 65.0% | |
| GCGTGCAAGACACGTGGCGA+TGG | - | chr5_2:55286553-55286572 | None:intergenic | 65.0% | |
| CTCAGCGCGTGCAAGACACG+TGG | - | chr5_2:55286559-55286578 | None:intergenic | 65.0% | |
| CACGTGTCTTGCACGCGCTG+AGG | + | chr5_2:55286557-55286576 | Msa0776750:CDS | 65.0% | |
| TGCGATTGGAAGCCGGTCGC+CGG | + | chr5_2:55287163-55287182 | Msa0776750:CDS | 65.0% | |
| CCAGCTAAGGCGGGTGTTCC+GGG | + | chr5_2:55287368-55287387 | Msa0776750:CDS | 65.0% | |
| TTGGAAGCCGGTCGCCGGAG+CGG | + | chr5_2:55287168-55287187 | Msa0776750:CDS | 70.0% | |
| CCCGGAACACCCGCCTTAGC+TGG | - | chr5_2:55287371-55287390 | None:intergenic | 70.0% | |
| GCTAAGGCGGGTGTTCCGGG+TGG | + | chr5_2:55287371-55287390 | Msa0776750:CDS | 70.0% | |
| AAGGCGGGTGTTCCGGGTGG+TGG | + | chr5_2:55287374-55287393 | Msa0776750:CDS | 70.0% | |
| TTGGAAGCCGGTCGCCGGAG+CGG | + | chr5_2:55287168-55287187 | Msa0776750:CDS | 70.0% | |
| CCCGGAACACCCGCCTTAGC+TGG | - | chr5_2:55287371-55287390 | None:intergenic | 70.0% | |
| GCTAAGGCGGGTGTTCCGGG+TGG | + | chr5_2:55287371-55287390 | Msa0776750:CDS | 70.0% | |
| AAGGCGGGTGTTCCGGGTGG+TGG | + | chr5_2:55287374-55287393 | Msa0776750:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 55286192 | 55288126 | 55286192 | ID=Msa0776750;Name=Msa0776750 |
| chr5_2 | mRNA | 55286192 | 55288126 | 55286192 | ID=Msa0776750-mRNA-1;Parent=Msa0776750;Name=Msa0776750-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|-1|0|1|-1|1|1|0|644 |
| chr5_2 | exon | 55286192 | 55288126 | 55286192 | ID=Msa0776750-mRNA-1:exon:16368;Parent=Msa0776750-mRNA-1 |
| chr5_2 | CDS | 55286192 | 55288126 | 55286192 | ID=Msa0776750-mRNA-1:cds;Parent=Msa0776750-mRNA-1 |
| Gene Sequence |
| Protein sequence |
