Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0325690 | XP_003595581.1 | 97.110 | 865 | 23 | 2 | 1 | 863 | 1 | 865 | 0.0 | 1714 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0325690 | sp|Q8VWF5|AML5_ARATH | 58.394 | 822 | 285 | 21 | 38 | 849 | 22 | 796 | 0.0 | 853 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0325690 | Msa1207790 | 0.811512 | 6.745865e-51 | -8.615850e-47 |
Msa0325690 | Msa1207800 | 0.814593 | 1.423776e-51 | -8.615850e-47 |
Msa0325690 | Msa1251340 | 0.813414 | 2.590887e-51 | -8.615850e-47 |
Msa0325690 | Msa1329130 | 0.808031 | 3.781587e-50 | -8.615850e-47 |
Msa0325690 | Msa1329210 | 0.812632 | 3.845358e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0325690 | MtrunA17_Chr2g0304041 | 97.110 | 865 | 23 | 2 | 1 | 863 | 1 | 865 | 0.0 | 1714 |
Msa0325690 | MtrunA17_Chr3g0096561 | 63.876 | 836 | 271 | 13 | 11 | 835 | 16 | 831 | 0.0 | 981 |
Msa0325690 | MtrunA17_Chr3g0131631 | 42.597 | 824 | 334 | 30 | 66 | 818 | 159 | 914 | 8.77e-168 | 512 |
Msa0325690 | MtrunA17_Chr8g0385721 | 42.755 | 842 | 360 | 22 | 43 | 818 | 137 | 922 | 1.65e-166 | 509 |
Msa0325690 | MtrunA17_Chr7g0221461 | 75.796 | 157 | 37 | 1 | 664 | 820 | 628 | 783 | 1.78e-71 | 251 |
Msa0325690 | MtrunA17_Chr7g0221461 | 42.947 | 319 | 156 | 6 | 57 | 372 | 79 | 374 | 5.98e-70 | 247 |
Msa0325690 | MtrunA17_Chr7g0276301 | 37.300 | 437 | 182 | 11 | 45 | 481 | 2 | 346 | 1.96e-67 | 235 |
Msa0325690 | MtrunA17_Chr7g0276301 | 60.345 | 58 | 22 | 1 | 665 | 722 | 515 | 571 | 3.13e-12 | 70.1 |
Msa0325690 | MtrunA17_Chr5g0423961 | 80.531 | 113 | 22 | 0 | 236 | 348 | 1 | 113 | 5.28e-55 | 185 |
Msa0325690 | MtrunA17_Chr5g0428671 | 81.416 | 113 | 21 | 0 | 236 | 348 | 1 | 113 | 7.59e-54 | 182 |
Msa0325690 | MtrunA17_Chr7g0276291 | 76.923 | 91 | 21 | 0 | 729 | 819 | 5 | 95 | 1.57e-41 | 149 |
Msa0325690 | MtrunA17_Chr3g0123391 | 41.148 | 209 | 98 | 7 | 646 | 839 | 288 | 486 | 7.46e-35 | 140 |
Msa0325690 | MtrunA17_Chr3g0123391 | 37.356 | 174 | 75 | 5 | 209 | 354 | 59 | 226 | 1.90e-23 | 105 |
Msa0325690 | MtrunA17_Chr4g0035711 | 38.889 | 126 | 63 | 2 | 698 | 809 | 188 | 313 | 2.66e-17 | 84.3 |
Msa0325690 | MtrunA17_Chr4g0033701 | 29.885 | 174 | 113 | 4 | 194 | 367 | 25 | 189 | 1.03e-13 | 75.5 |
Msa0325690 | MtrunA17_Chr4g0074711 | 26.178 | 191 | 118 | 5 | 185 | 353 | 156 | 345 | 7.78e-13 | 71.6 |
Msa0325690 | MtrunA17_Chr2g0288251 | 25.967 | 181 | 112 | 5 | 194 | 353 | 153 | 332 | 1.06e-11 | 67.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0325690 | AT1G29400.1 | 58.394 | 822 | 285 | 21 | 38 | 849 | 22 | 796 | 0.0 | 853 |
Msa0325690 | AT1G29400.2 | 58.394 | 822 | 285 | 21 | 38 | 849 | 22 | 796 | 0.0 | 853 |
Msa0325690 | AT1G29400.3 | 58.394 | 822 | 285 | 21 | 38 | 849 | 22 | 796 | 0.0 | 853 |
Msa0325690 | AT2G42890.1 | 46.883 | 802 | 380 | 16 | 30 | 819 | 35 | 802 | 0.0 | 607 |
Msa0325690 | AT2G42890.3 | 46.883 | 802 | 380 | 16 | 30 | 819 | 22 | 789 | 0.0 | 606 |
Msa0325690 | AT2G42890.2 | 46.883 | 802 | 380 | 16 | 30 | 819 | 22 | 789 | 0.0 | 606 |
Msa0325690 | AT5G61960.7 | 42.283 | 771 | 366 | 22 | 100 | 830 | 135 | 866 | 2.93e-148 | 460 |
Msa0325690 | AT5G61960.4 | 42.283 | 771 | 366 | 22 | 100 | 830 | 135 | 866 | 2.93e-148 | 460 |
Msa0325690 | AT5G61960.8 | 42.283 | 771 | 366 | 22 | 100 | 830 | 135 | 866 | 2.93e-148 | 460 |
Msa0325690 | AT5G61960.11 | 42.283 | 771 | 366 | 22 | 100 | 830 | 135 | 866 | 2.93e-148 | 460 |
Msa0325690 | AT5G61960.6 | 42.283 | 771 | 366 | 22 | 100 | 830 | 135 | 866 | 2.93e-148 | 460 |
Msa0325690 | AT5G61960.9 | 42.283 | 771 | 366 | 22 | 100 | 830 | 135 | 866 | 2.93e-148 | 460 |
Msa0325690 | AT5G61960.5 | 42.283 | 771 | 366 | 22 | 100 | 830 | 135 | 866 | 2.93e-148 | 460 |
Msa0325690 | AT5G61960.3 | 42.283 | 771 | 366 | 22 | 100 | 830 | 142 | 873 | 3.56e-148 | 460 |
Msa0325690 | AT5G61960.1 | 42.283 | 771 | 366 | 22 | 100 | 830 | 142 | 873 | 3.56e-148 | 460 |
Msa0325690 | AT5G61960.10 | 42.283 | 771 | 366 | 22 | 100 | 830 | 142 | 873 | 3.56e-148 | 460 |
Msa0325690 | AT5G61960.2 | 42.283 | 771 | 366 | 22 | 100 | 830 | 142 | 873 | 3.56e-148 | 460 |
Msa0325690 | AT5G07290.1 | 53.846 | 286 | 97 | 12 | 563 | 830 | 603 | 871 | 3.12e-72 | 256 |
Msa0325690 | AT5G07290.1 | 44.574 | 258 | 122 | 4 | 100 | 357 | 135 | 371 | 1.81e-55 | 207 |
Msa0325690 | AT3G26120.1 | 36.364 | 187 | 97 | 1 | 194 | 358 | 104 | 290 | 3.02e-32 | 134 |
Msa0325690 | AT3G26120.1 | 45.033 | 151 | 61 | 3 | 692 | 820 | 402 | 552 | 4.56e-32 | 133 |
Msa0325690 | AT1G67770.1 | 32.979 | 188 | 108 | 1 | 194 | 363 | 78 | 265 | 3.71e-28 | 120 |
Msa0325690 | AT1G67770.1 | 43.836 | 146 | 63 | 4 | 683 | 809 | 320 | 465 | 9.51e-28 | 119 |
Msa0325690 | AT5G07930.1 | 36.000 | 125 | 66 | 2 | 689 | 800 | 126 | 249 | 8.46e-18 | 85.1 |
Msa0325690 | AT5G07930.3 | 36.000 | 125 | 66 | 2 | 689 | 800 | 126 | 249 | 1.01e-17 | 85.1 |
Msa0325690 | AT1G37140.1 | 37.288 | 118 | 68 | 2 | 697 | 808 | 83 | 200 | 2.96e-16 | 79.7 |
Msa0325690 | AT5G07930.2 | 35.780 | 109 | 57 | 1 | 689 | 784 | 126 | 234 | 9.99e-16 | 78.6 |
Msa0325690 | AT5G54900.1 | 27.461 | 193 | 117 | 5 | 183 | 353 | 140 | 331 | 1.86e-12 | 70.5 |
Msa0325690 | AT2G43410.6 | 29.487 | 156 | 100 | 5 | 195 | 350 | 17 | 162 | 5.22e-11 | 67.0 |
Msa0325690 | AT2G43410.1 | 29.487 | 156 | 100 | 5 | 195 | 350 | 17 | 162 | 5.22e-11 | 67.0 |
Find 247 sgRNAs with CRISPR-Local
Find 466 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTATCTGCCAATTGACTTTA+AGG | 0.012034 | 2_4:-33499583 | Msa0325690:intron |
GATAATCGTTCATACTTATT+TGG | 0.091887 | 2_4:+33499776 | None:intergenic |
CGTTCATCAAACTTGAATTT+TGG | 0.116811 | 2_4:+33499115 | None:intergenic |
GAAGACCTCCGCCAAATATT+TGG | 0.140167 | 2_4:-33501668 | Msa0325690:CDS |
CCACGATATGGACTAAATTT+TGG | 0.144486 | 2_4:+33500460 | None:intergenic |
TATAAATACAGCTGGAAAAT+TGG | 0.153445 | 2_4:-33502843 | Msa0325690:CDS |
GAGTAGTTAGTTTGAGGTTC+AGG | 0.166341 | 2_4:-33498340 | Msa0325690:three_prime_UTR |
GGTTGTTGGGCTCATTATTT+TGG | 0.173697 | 2_4:+33500651 | None:intergenic |
CGCCAAATATTTGGGGCTTA+TGG | 0.189059 | 2_4:-33501659 | Msa0325690:CDS |
ATGCTTAATAGTGGCATTTC+TGG | 0.196189 | 2_4:-33500070 | Msa0325690:CDS |
TCTTCTCATATAAGGTTAAT+TGG | 0.216277 | 2_4:+33498555 | None:intergenic |
GTGGGAGGCGGAGCTGTTGC+TGG | 0.220296 | 2_4:-33502272 | Msa0325690:CDS |
CTCCATAAGCCCCAAATATT+TGG | 0.220471 | 2_4:+33501657 | None:intergenic |
TGACCGCTCCACAGTTTCTA+TGG | 0.234954 | 2_4:-33500384 | Msa0325690:CDS |
ACACCATTAGGTAAAGAATA+AGG | 0.261074 | 2_4:+33502293 | None:intergenic |
ATGAATAATGTTGGCTATAG+AGG | 0.276046 | 2_4:-33500121 | Msa0325690:CDS |
AACTTAAATGAAACTGAAAA+TGG | 0.278401 | 2_4:-33502629 | Msa0325690:CDS |
CCATTGTCAGGCATATTTCT+TGG | 0.278917 | 2_4:+33500028 | None:intergenic |
GCCAGCAAGCTTCAAAAGTT+TGG | 0.283525 | 2_4:-33498483 | Msa0325690:three_prime_UTR |
ATAAATACAGCTGGAAAATT+GGG | 0.283750 | 2_4:-33502842 | Msa0325690:CDS |
TCTTTCGATCCTTCATTTAT+CGG | 0.291970 | 2_4:-33502979 | Msa0325690:intron |
CATGTCGGTTCTGCTCCTTC+AGG | 0.305218 | 2_4:-33500199 | Msa0325690:CDS |
TCCAGCGGATGAAATCTTAT+TGG | 0.308364 | 2_4:+33500513 | None:intergenic |
AAGACCTCCGCCAAATATTT+GGG | 0.315396 | 2_4:-33501667 | Msa0325690:CDS |
TTGGCATCCAAACTCATAAA+AGG | 0.321386 | 2_4:+33498574 | None:intergenic |
GTTGGCTCTGAGGATAAGTT+TGG | 0.323282 | 2_4:+33500355 | None:intergenic |
CAGCACTTAAATCATTAAAT+AGG | 0.323423 | 2_4:-33501427 | Msa0325690:CDS |
ATAATCGTTCATACTTATTT+GGG | 0.326560 | 2_4:+33499777 | None:intergenic |
TTGAAGCTAATCCCGGTAAA+TGG | 0.327238 | 2_4:+33500623 | None:intergenic |
CTTTGGAACCTAAAATGAAA+TGG | 0.328669 | 2_4:+33504405 | None:intergenic |
TTCAAAAGTTTGGTGCATTT+CGG | 0.336040 | 2_4:-33498473 | Msa0325690:three_prime_UTR |
AAGACTTTCTGACACATTAG+AGG | 0.337739 | 2_4:+33498249 | None:intergenic |
ACTCTACATCTTCTCATATA+AGG | 0.345203 | 2_4:+33498547 | None:intergenic |
TGTGTTTACATGCAGTATAT+AGG | 0.346668 | 2_4:+33501976 | None:intergenic |
GTGTTTACATGCAGTATATA+GGG | 0.346693 | 2_4:+33501977 | None:intergenic |
ACCTTGTTCCCTTGAGGACT+TGG | 0.350773 | 2_4:-33502438 | Msa0325690:CDS |
CGTGGAACTTTGTCCTCGTT+TGG | 0.354632 | 2_4:-33500442 | Msa0325690:CDS |
AACAACCAGCAACCATTTAC+CGG | 0.366832 | 2_4:-33500635 | Msa0325690:CDS |
GAGAGAGAGAAATTAAATAA+TGG | 0.369226 | 2_4:+33504623 | None:intergenic |
GGAGAGGAGAGAGTTTAAAA+AGG | 0.374675 | 2_4:+33504566 | None:intergenic |
CACCATTAGGTAAAGAATAA+GGG | 0.375363 | 2_4:+33502294 | None:intergenic |
AGAGCTCTTGGCCGGCATAA+TGG | 0.380314 | 2_4:-33502483 | Msa0325690:CDS |
CATTGAAGTTTCAGATGACT+TGG | 0.382128 | 2_4:+33500144 | None:intergenic |
AGTAGTTAGTTTGAGGTTCA+GGG | 0.384460 | 2_4:-33498339 | Msa0325690:three_prime_UTR |
TTTGGTGCATCAACCTCAAA+TGG | 0.391564 | 2_4:-33500424 | Msa0325690:CDS |
GGTAAATGGTTGCTGGTTGT+TGG | 0.394322 | 2_4:+33500637 | None:intergenic |
CTCCAACAATATGTATATTC+AGG | 0.394698 | 2_4:-33498656 | Msa0325690:CDS |
TTTAAACTCTCTCCTCTCCT+GGG | 0.398235 | 2_4:-33504562 | Msa0325690:five_prime_UTR |
AGCTCGACTTAGATAAGATT+AGG | 0.403572 | 2_4:-33499841 | Msa0325690:CDS |
CATCAAGAGGCAGAACTTAA+CGG | 0.403806 | 2_4:-33502563 | Msa0325690:CDS |
TTACGAGGGCATTCTTCCCT+TGG | 0.405207 | 2_4:+33499145 | None:intergenic |
GCTCCGCCTCCCACACCATT+AGG | 0.408463 | 2_4:+33502281 | None:intergenic |
CCAGCGGATGAAATCTTATT+GGG | 0.408808 | 2_4:+33500514 | None:intergenic |
TGTATTTATAGGTGGAATCT+TGG | 0.409604 | 2_4:+33502856 | None:intergenic |
CTGACCGTGTTAGGAGTAGA+TGG | 0.410461 | 2_4:-33499907 | Msa0325690:CDS |
GTCAACGAACTCTGCTCAAT+AGG | 0.413479 | 2_4:+33500697 | None:intergenic |
AATATACATATTGTTGGAGT+TGG | 0.413694 | 2_4:+33498660 | None:intergenic |
CTCATAAAAGGACCATCCTT+TGG | 0.414491 | 2_4:+33498586 | None:intergenic |
GAGGACAAAGTTCCACGATA+TGG | 0.417127 | 2_4:+33500448 | None:intergenic |
TGGTTCTGAAGCTGCTGATC+AGG | 0.418008 | 2_4:-33499055 | Msa0325690:intron |
TTGTGAGAGAACGAAGAAAA+GGG | 0.418725 | 2_4:+33504487 | None:intergenic |
ACAGTGAAGGCCGCAACTAT+TGG | 0.421095 | 2_4:-33500577 | Msa0325690:CDS |
GGTCAAGCTCTTGATTCAGT+TGG | 0.423960 | 2_4:+33500944 | None:intergenic |
GTAAATGGTTGCTGGTTGTT+GGG | 0.425050 | 2_4:+33500638 | None:intergenic |
TGCCTGAATATACATATTGT+TGG | 0.425212 | 2_4:+33498654 | None:intergenic |
TTTGGAACCTAAAATGAAAT+GGG | 0.425436 | 2_4:+33504406 | None:intergenic |
GATGGTAATAATCATGTAAA+CGG | 0.427928 | 2_4:-33502530 | Msa0325690:CDS |
TGGGAGGCGGAGCTGTTGCT+GGG | 0.428318 | 2_4:-33502271 | Msa0325690:CDS |
GACCAAGCTGAAGGTTTGGT+TGG | 0.428996 | 2_4:+33500337 | None:intergenic |
CCTTGACCAAGCTGAAGGTT+TGG | 0.429115 | 2_4:+33500333 | None:intergenic |
TGATTGATATCTTTGTCTGA+TGG | 0.433902 | 2_4:+33501734 | None:intergenic |
AAAATTGAAATACCTGAAAA+GGG | 0.434378 | 2_4:+33504345 | None:intergenic |
CCTCTAGCCGGCTCTCCGCC+AGG | 0.437341 | 2_4:-33500883 | Msa0325690:intron |
TTAGGTAATGGTCCTTATCC+AGG | 0.439673 | 2_4:-33499959 | Msa0325690:CDS |
GGGAAGAGCGTGGCGATGAT+TGG | 0.440272 | 2_4:+33504531 | None:intergenic |
TAATCCCGGTAAATGGTTGC+TGG | 0.441185 | 2_4:+33500630 | None:intergenic |
CCCAATAAGATTTCATCCGC+TGG | 0.442313 | 2_4:-33500514 | Msa0325690:CDS |
ACATATACCTTAAAGTCAAT+TGG | 0.450514 | 2_4:+33499576 | None:intergenic |
GGAAATTACATGCTTAATAG+TGG | 0.451447 | 2_4:-33500079 | Msa0325690:CDS |
GGTGCGTTGGAAGTTTCATC+TGG | 0.452857 | 2_4:-33502815 | Msa0325690:CDS |
TCTAGAGAGTAGTTAGTTTG+AGG | 0.454479 | 2_4:-33498346 | Msa0325690:three_prime_UTR |
CCATCTGAGTGGAAGACAAT+AGG | 0.454748 | 2_4:+33499075 | None:intergenic |
AAAATAAACCTTTGCGGCGA+AGG | 0.455847 | 2_4:-33501890 | Msa0325690:CDS |
CGAGCTCCTCCAGGCCGACT+TGG | 0.456319 | 2_4:+33501371 | None:intergenic |
TGTGAATGTGTTGAAAATAG+TGG | 0.456743 | 2_4:+33504460 | None:intergenic |
GACTACTCCTTCCTATGTCC+TGG | 0.458892 | 2_4:+33500554 | None:intergenic |
TTTGTGAGAGAACGAAGAAA+AGG | 0.466375 | 2_4:+33504486 | None:intergenic |
ATAGCTTCTTGTTGTCAACT+TGG | 0.466998 | 2_4:+33499867 | None:intergenic |
GGAGATTTACCGATAAATGA+AGG | 0.468222 | 2_4:+33502970 | None:intergenic |
TGATGATGACGAAGAGCTCT+TGG | 0.468438 | 2_4:-33502495 | Msa0325690:CDS |
AAGTTTGATGAACCATTGTC+AGG | 0.471153 | 2_4:+33500016 | None:intergenic |
TTACCTAATGGTGTGGGAGG+CGG | 0.474742 | 2_4:-33502284 | Msa0325690:CDS |
AAGAGCTCTTCGTCATCATC+AGG | 0.479159 | 2_4:+33502497 | None:intergenic |
GACCGCTCCACAGTTTCTAT+GGG | 0.479354 | 2_4:-33500383 | Msa0325690:CDS |
ATACATATTGTTGGAGTTGG+AGG | 0.481683 | 2_4:+33498663 | None:intergenic |
GAACCAACCTGGCGGAGAGC+CGG | 0.482139 | 2_4:+33500876 | None:intergenic |
AGGTCTTCATTTGAAACTGA+TGG | 0.483214 | 2_4:+33501683 | None:intergenic |
TCTGGCTACTTTCCAAAGGA+TGG | 0.483392 | 2_4:-33498598 | Msa0325690:CDS |
CTCATACAAACCTCGTAGAA+TGG | 0.484056 | 2_4:+33499392 | None:intergenic |
AGCTTGGTCAAGGCCATCTG+TGG | 0.486302 | 2_4:-33500323 | Msa0325690:CDS |
CGAGAAGGATGCTCTCCATA+TGG | 0.489991 | 2_4:+33502242 | None:intergenic |
TAAGTATAGAAGATCTCATT+CGG | 0.490458 | 2_4:+33499993 | None:intergenic |
TGCAAAATTGAAGCTAATCC+CGG | 0.501056 | 2_4:+33500616 | None:intergenic |
AAACCGAAGTGCCTTTCAAA+AGG | 0.501561 | 2_4:+33500172 | None:intergenic |
GTAGGTAGTAGTCCTGGATA+AGG | 0.503433 | 2_4:+33499947 | None:intergenic |
TTCCACTGACGACCCATTTG+AGG | 0.503882 | 2_4:+33500411 | None:intergenic |
TTGGCGTATGCTCGAATCCA+AGG | 0.504323 | 2_4:-33499162 | Msa0325690:CDS |
ACAAATATAAATCATTCTCC+TGG | 0.504505 | 2_4:-33500676 | Msa0325690:CDS |
TATTCTTTACCTAATGGTGT+GGG | 0.504565 | 2_4:-33502290 | Msa0325690:CDS |
AAGCTTGAACCAAGTCGGCC+TGG | 0.505150 | 2_4:-33501380 | Msa0325690:CDS |
TTATTCTTTACCTAATGGTG+TGG | 0.505664 | 2_4:-33502291 | Msa0325690:CDS |
CATTGCAAAATAAACCTTTG+CGG | 0.507495 | 2_4:-33501896 | Msa0325690:CDS |
TGTGAGAGAACGAAGAAAAG+GGG | 0.512125 | 2_4:+33504488 | None:intergenic |
ACTTCTCCCACTTCTTCCCA+TGG | 0.512338 | 2_4:+33499208 | None:intergenic |
ATTCCACCTATAAATACAGC+TGG | 0.512528 | 2_4:-33502851 | Msa0325690:CDS |
GCAACTATTGGCCAGGACAT+AGG | 0.512697 | 2_4:-33500565 | Msa0325690:CDS |
TGGCAGATAGAGAAAATCAT+AGG | 0.514203 | 2_4:+33499596 | None:intergenic |
TACATATTGTTGGAGTTGGA+GGG | 0.514427 | 2_4:+33498664 | None:intergenic |
ATTGAAGTTTCAGATGACTT+GGG | 0.514483 | 2_4:+33500145 | None:intergenic |
GAATTGTTCTGACTTGAGTA+CGG | 0.516495 | 2_4:+33500259 | None:intergenic |
GTCAAAATCATCCATTATGC+CGG | 0.516725 | 2_4:+33502472 | None:intergenic |
GACATAGGAAGGAGTAGTCA+TGG | 0.517179 | 2_4:-33500550 | Msa0325690:CDS |
AATTGTTCTGACTTGAGTAC+GGG | 0.520148 | 2_4:+33500260 | None:intergenic |
AGTGGCATTTCTGGTAATGT+TGG | 0.527380 | 2_4:-33500061 | Msa0325690:CDS |
GAAGGCCGCAACTATTGGCC+AGG | 0.527459 | 2_4:-33500572 | Msa0325690:CDS |
TAGAAACTGTGGAGCGGTCA+AGG | 0.528238 | 2_4:+33500387 | None:intergenic |
CACTTGCGACGAGCTCCTCC+AGG | 0.529174 | 2_4:+33501362 | None:intergenic |
TGAATAATGTTGGCTATAGA+GGG | 0.529444 | 2_4:-33500120 | Msa0325690:CDS |
TCAGACAAAGATATCAATCA+AGG | 0.529552 | 2_4:-33501731 | Msa0325690:CDS |
GAAAACTTCGAGACTCATCT+TGG | 0.529593 | 2_4:+33500923 | None:intergenic |
TTACAATTAAGCGATTCCTC+TGG | 0.532232 | 2_4:-33498616 | Msa0325690:CDS |
TTAAACTCTCTCCTCTCCTG+GGG | 0.532940 | 2_4:-33504561 | Msa0325690:five_prime_UTR |
CGGTTTACCTTGTTCCCTTG+AGG | 0.534534 | 2_4:-33502444 | Msa0325690:CDS |
CCTATTGTCTTCCACTCAGA+TGG | 0.534767 | 2_4:-33499075 | Msa0325690:CDS |
TGGAGGTTTGGAACTAGAAA+CGG | 0.538596 | 2_4:-33502390 | Msa0325690:CDS |
CATACTCTTCCAAGTCCTCA+AGG | 0.540296 | 2_4:+33502429 | None:intergenic |
TTGAAGTTTCAGATGACTTG+GGG | 0.541356 | 2_4:+33500146 | None:intergenic |
GTTGCTGGGGAACATCCATA+TGG | 0.543396 | 2_4:-33502257 | Msa0325690:CDS |
GATGACGAAGAGCTCTTGGC+CGG | 0.543451 | 2_4:-33502491 | Msa0325690:CDS |
GTAATTTGAATGTCAATATG+TGG | 0.546623 | 2_4:-33498369 | Msa0325690:three_prime_UTR |
ATAGCAGTAGGTAGTAGTCC+TGG | 0.548685 | 2_4:+33499941 | None:intergenic |
CATGATTATTACCATCGTCA+AGG | 0.550907 | 2_4:+33502537 | None:intergenic |
TCAAGTTTCCTTCGCCGCAA+AGG | 0.552060 | 2_4:+33501882 | None:intergenic |
TTTATAGGTGGAATCTTGGA+AGG | 0.555229 | 2_4:+33502860 | None:intergenic |
TCGAAATATTAACAGTAATG+TGG | 0.555670 | 2_4:-33502207 | Msa0325690:CDS |
AAAATTGGGGCATGGTGCGT+TGG | 0.555678 | 2_4:-33502828 | Msa0325690:CDS |
CGAACAAACAATGTTCGAGA+AGG | 0.555932 | 2_4:+33502227 | None:intergenic |
CATAAGCCCCAAATATTTGG+CGG | 0.558156 | 2_4:+33501660 | None:intergenic |
CCACAGGAAAGCCTCAGTGC+GGG | 0.558177 | 2_4:-33502365 | Msa0325690:CDS |
ACATATTGTTGGAGTTGGAG+GGG | 0.558653 | 2_4:+33498665 | None:intergenic |
GTTAGTTTGAGGTTCAGGGT+TGG | 0.559690 | 2_4:-33498335 | Msa0325690:three_prime_UTR |
TTTCCAGCTGTATTTATAGG+TGG | 0.561041 | 2_4:+33502848 | None:intergenic |
AGACATTCCATGGGAAGAAG+TGG | 0.561680 | 2_4:-33499215 | Msa0325690:CDS |
GATGTAGAGTTGCTAACAGA+AGG | 0.561738 | 2_4:-33498534 | Msa0325690:three_prime_UTR |
TCCAAGTCCTCAAGGGAACA+AGG | 0.565065 | 2_4:+33502437 | None:intergenic |
AGATATCAATCAAGGAACCT+TGG | 0.566566 | 2_4:-33501723 | Msa0325690:CDS |
TTCCTCTGGCTACTTTCCAA+AGG | 0.571135 | 2_4:-33498602 | Msa0325690:CDS |
AGCCAACCAAACCTTCAGCT+TGG | 0.571354 | 2_4:-33500339 | Msa0325690:CDS |
TTAAATAGGAGTGACATAGC+TGG | 0.575075 | 2_4:-33501413 | Msa0325690:CDS |
TTGGTGCATCAACCTCAAAT+GGG | 0.575610 | 2_4:-33500423 | Msa0325690:CDS |
TCTTTACCTAATGGTGTGGG+AGG | 0.577294 | 2_4:-33502287 | Msa0325690:CDS |
CATCAACTTAGTACATCGAA+TGG | 0.577369 | 2_4:-33500298 | Msa0325690:CDS |
AGGACTACTACCTACTGCTA+TGG | 0.577598 | 2_4:-33499939 | Msa0325690:CDS |
ATGATTATTACCATCGTCAA+GGG | 0.577768 | 2_4:+33502538 | None:intergenic |
GTGAATGTGTTGAAAATAGT+GGG | 0.578970 | 2_4:+33504461 | None:intergenic |
GGGAGGCGGAGCTGTTGCTG+GGG | 0.579092 | 2_4:-33502270 | Msa0325690:CDS |
ACAACCAGCAACCATTTACC+GGG | 0.579683 | 2_4:-33500634 | Msa0325690:CDS |
AAATCTTATTGGGAAATATG+TGG | 0.580316 | 2_4:+33500524 | None:intergenic |
TGAAGGTTTGGTTGGCTCTG+AGG | 0.581671 | 2_4:+33500345 | None:intergenic |
GATGGCCTTGACCAAGCTGA+AGG | 0.583358 | 2_4:+33500328 | None:intergenic |
TTAGGAGTGGTGAAGATACA+AGG | 0.586418 | 2_4:-33499823 | Msa0325690:CDS |
ACCATTAGGTAAAGAATAAG+GGG | 0.586598 | 2_4:+33502295 | None:intergenic |
AACCTCAAATGGGTCGTCAG+TGG | 0.586729 | 2_4:-33500413 | Msa0325690:CDS |
ATTATGACATCCGTGCTGCT+CGG | 0.588900 | 2_4:-33501932 | Msa0325690:CDS |
TTCGTCATCATCAGGAAGCA+TGG | 0.588948 | 2_4:+33502505 | None:intergenic |
CCAAACCTTCAGCTTGGTCA+AGG | 0.591925 | 2_4:-33500333 | Msa0325690:CDS |
CTTTCAAAAGGCAAACCTGA+AGG | 0.593340 | 2_4:+33500184 | None:intergenic |
CAAGTGGGTTCACCTCTAGC+CGG | 0.595642 | 2_4:-33500895 | Msa0325690:CDS |
ACTTCAATGATGAATAATGT+TGG | 0.595681 | 2_4:-33500130 | Msa0325690:CDS |
CTAAGTTGATGTCCCACAGA+TGG | 0.596948 | 2_4:+33500310 | None:intergenic |
TATATACTGCATGTAAACAC+AGG | 0.597214 | 2_4:-33501974 | Msa0325690:CDS |
CCTGGCGGAGAGCCGGCTAG+AGG | 0.597475 | 2_4:+33500883 | None:intergenic |
GGAACTAGAAACGGATCCAC+AGG | 0.598958 | 2_4:-33502381 | Msa0325690:CDS |
CAGGTGGGAGCAAAAGCTGA+AGG | 0.599573 | 2_4:-33498437 | Msa0325690:three_prime_UTR |
CCAAAATTTAGTCCATATCG+TGG | 0.601321 | 2_4:-33500460 | Msa0325690:CDS |
TTATGTTGATATCTTTGACA+CGG | 0.601418 | 2_4:-33498184 | Msa0325690:three_prime_UTR |
GTAAAACTCTCCATAGCAGT+AGG | 0.602877 | 2_4:+33499929 | None:intergenic |
GTTAGTTGAGATGTCATCAA+CGG | 0.603631 | 2_4:+33502598 | None:intergenic |
CCCGCACTGAGGCTTTCCTG+TGG | 0.605478 | 2_4:+33502365 | None:intergenic |
GACTGGCATCAGATGAAGCA+TGG | 0.606251 | 2_4:+33502780 | None:intergenic |
TAAATACAGCTGGAAAATTG+GGG | 0.607595 | 2_4:-33502841 | Msa0325690:CDS |
TAACGAGCTAGAAAAGAGAC+TGG | 0.611045 | 2_4:+33502763 | None:intergenic |
TAAACTCTCTCCTCTCCTGG+GGG | 0.611316 | 2_4:-33504560 | Msa0325690:five_prime_UTR |
AGGGTTGGTAAGACTACATG+AGG | 0.612126 | 2_4:-33498320 | Msa0325690:three_prime_UTR |
TGCCATTGATGAAAATCACA+AGG | 0.615124 | 2_4:-33499622 | Msa0325690:CDS |
AACTTATGATGCCTCTTGTG+AGG | 0.615498 | 2_4:+33501482 | None:intergenic |
AAGCCCCAAATATTTGGCGG+AGG | 0.615848 | 2_4:+33501663 | None:intergenic |
AGACCTCCGCCAAATATTTG+GGG | 0.617167 | 2_4:-33501666 | Msa0325690:CDS |
GACATTCCATGGGAAGAAGT+GGG | 0.618165 | 2_4:-33499214 | Msa0325690:CDS |
GGACTTCCCCATAGAAACTG+TGG | 0.618606 | 2_4:+33500376 | None:intergenic |
CTGCTGAGATGAACTGACAA+AGG | 0.619330 | 2_4:+33500237 | None:intergenic |
ACAGCTGGAAAATTGGGGCA+TGG | 0.621362 | 2_4:-33502836 | Msa0325690:CDS |
CCAAGAAATATGCCTGACAA+TGG | 0.622245 | 2_4:-33500028 | Msa0325690:CDS |
TAGAATGGAATAATAAGTGA+CGG | 0.625257 | 2_4:+33499407 | None:intergenic |
CGATCCATCTACTCCTAACA+CGG | 0.628297 | 2_4:+33499903 | None:intergenic |
TGGCGTATGCTCGAATCCAA+GGG | 0.629165 | 2_4:-33499161 | Msa0325690:CDS |
ATACTCTTCCAAGTCCTCAA+GGG | 0.629251 | 2_4:+33502430 | None:intergenic |
GCTTGGTCAAGGCCATCTGT+GGG | 0.630534 | 2_4:-33500322 | Msa0325690:CDS |
CTATTGGCCAGGACATAGGA+AGG | 0.630779 | 2_4:-33500561 | Msa0325690:CDS |
TTAAGAGAGAGGGAAGAGCG+TGG | 0.631236 | 2_4:+33504521 | None:intergenic |
TGAGGTTGATGCACCAAACG+AGG | 0.632584 | 2_4:+33500429 | None:intergenic |
AATATTTGGGGCTTATGGAG+AGG | 0.633083 | 2_4:-33501654 | Msa0325690:CDS |
GACTTAGATAAGATTAGGAG+TGG | 0.634677 | 2_4:-33499836 | Msa0325690:CDS |
AGTAGATGGATCGACAACAA+TGG | 0.640609 | 2_4:-33499893 | Msa0325690:CDS |
AAATTGAAATACCTGAAAAG+GGG | 0.640623 | 2_4:+33504346 | None:intergenic |
GCATAAAGCTTGAACCAAGT+CGG | 0.641212 | 2_4:-33501385 | Msa0325690:CDS |
TAAGGGAAACTCCTCACAAG+AGG | 0.642869 | 2_4:-33501493 | Msa0325690:CDS |
AAATATTAACAGTAATGTGG+AGG | 0.645511 | 2_4:-33502204 | Msa0325690:CDS |
TTGCAGAATAAATGCAACGT+CGG | 0.645819 | 2_4:-33499455 | Msa0325690:intron |
AATAATGTTGGCTATAGAGG+GGG | 0.651189 | 2_4:-33500118 | Msa0325690:CDS |
TTCACTGTGTTCGACAACTG+TGG | 0.653764 | 2_4:+33500592 | None:intergenic |
TGAGTTGAAATTAGATCCAG+CGG | 0.653954 | 2_4:+33500498 | None:intergenic |
ATATACTGCATGTAAACACA+GGG | 0.655050 | 2_4:-33501973 | Msa0325690:CDS |
AGGTGGGAGCAAAAGCTGAA+GGG | 0.663137 | 2_4:-33498436 | Msa0325690:three_prime_UTR |
ACAGTTGTCGAACACAGTGA+AGG | 0.664160 | 2_4:-33500590 | Msa0325690:CDS |
ATCCAAATTGAAAACTACCA+AGG | 0.664209 | 2_4:+33501706 | None:intergenic |
GCATAGCTGTCCGAGCAGCA+CGG | 0.664883 | 2_4:+33501922 | None:intergenic |
GAATAATGTTGGCTATAGAG+GGG | 0.665466 | 2_4:-33500119 | Msa0325690:CDS |
GGCTTATGGAGAGGTCAAAG+AGG | 0.666317 | 2_4:-33501645 | Msa0325690:intron |
CTTGAACCAAGTCGGCCTGG+AGG | 0.672542 | 2_4:-33501377 | Msa0325690:CDS |
ACCGCTCCACAGTTTCTATG+GGG | 0.675690 | 2_4:-33500382 | Msa0325690:CDS |
CTGAGTGGAAGACAATAGGT+CGG | 0.676153 | 2_4:+33499079 | None:intergenic |
TATGTCCTGGCCAATAGTTG+CGG | 0.676299 | 2_4:+33500567 | None:intergenic |
GGGTTGGTAAGACTACATGA+GGG | 0.676911 | 2_4:-33498319 | Msa0325690:three_prime_UTR |
TCCACAGGAAAGCCTCAGTG+CGG | 0.680973 | 2_4:-33502366 | Msa0325690:CDS |
CAGCTTCAGAACCATCTGAG+TGG | 0.694749 | 2_4:+33499064 | None:intergenic |
ATACTGCATGTAAACACAGG+GGG | 0.695902 | 2_4:-33501971 | Msa0325690:CDS |
TCCCCATAGAAACTGTGGAG+CGG | 0.698213 | 2_4:+33500381 | None:intergenic |
GCCATTGATGAAAATCACAA+GGG | 0.699488 | 2_4:-33499621 | Msa0325690:CDS |
CTTAACGGTTCCCTTGACGA+TGG | 0.700275 | 2_4:-33502548 | Msa0325690:CDS |
ATCCTTTGGAAAGTAGCCAG+AGG | 0.701334 | 2_4:+33498600 | None:intergenic |
ATGTGGAGGATACAGAGCTG+CGG | 0.709896 | 2_4:-33502190 | Msa0325690:CDS |
ACTTATTATTCCATTCTACG+AGG | 0.710421 | 2_4:-33499402 | Msa0325690:intron |
ACTTAGATATTCCCGCACTG+AGG | 0.722073 | 2_4:+33502354 | None:intergenic |
GGTTGGTAAGACTACATGAG+GGG | 0.726033 | 2_4:-33498318 | Msa0325690:three_prime_UTR |
CCATTAGGTAAAGAATAAGG+GGG | 0.726531 | 2_4:+33502296 | None:intergenic |
TATACTGCATGTAAACACAG+GGG | 0.784450 | 2_4:-33501972 | Msa0325690:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTATTAAAATTTTCATAAC+AGG | - | chr2_4:33502048-33502067 | Msa0325690:intron | 10.0% |
!!! | TCTTATTAAATTTTATTTTG+CGG | - | chr2_4:33503456-33503475 | Msa0325690:intron | 10.0% |
!! | AAAATTCAATTAAAAAACAC+TGG | + | chr2_4:33498552-33498571 | None:intergenic | 15.0% |
!!! | TTATTTTCATGGATTAAAAA+TGG | - | chr2_4:33498804-33498823 | Msa0325690:intron | 15.0% |
!! | ATATATATGATCTAGAAAAA+AGG | + | chr2_4:33498874-33498893 | None:intergenic | 15.0% |
!! | TTTCTAGATCATATATATAT+AGG | - | chr2_4:33498876-33498895 | Msa0325690:intron | 15.0% |
!!! | GAGTTATTTTTTGATATTAT+AGG | + | chr2_4:33499742-33499761 | None:intergenic | 15.0% |
!!! | AATTTTTATTTTCAGCAATA+TGG | - | chr2_4:33500779-33500798 | Msa0325690:intron | 15.0% |
!! | TGAACAATTAATAAATATCT+CGG | + | chr2_4:33503113-33503132 | None:intergenic | 15.0% |
!!! | TAAATAATGGTTGTTTTCAA+TGG | + | chr2_4:33498157-33498176 | None:intergenic | 20.0% |
!! | AAAATTGAAATACCTGAAAA+GGG | + | chr2_4:33498448-33498467 | None:intergenic | 20.0% |
!! | AAAAATTGAAATACCTGAAA+AGG | + | chr2_4:33498449-33498468 | None:intergenic | 20.0% |
!!! | ATGGTGATTTTTGATTTTTT+AGG | - | chr2_4:33498595-33498614 | Msa0325690:CDS | 20.0% |
!!! | TGGTGATTTTTGATTTTTTA+GGG | - | chr2_4:33498596-33498615 | Msa0325690:CDS | 20.0% |
!! | AGTGTTTCAGTTTATAATTT+AGG | - | chr2_4:33498644-33498663 | Msa0325690:CDS | 20.0% |
!! | GTGTTTCAGTTTATAATTTA+GGG | - | chr2_4:33498645-33498664 | Msa0325690:CDS | 20.0% |
!! | ATCATATATATATAGGAACA+TGG | - | chr2_4:33498883-33498902 | Msa0325690:intron | 20.0% |
!!! | TGTGAATTTCTTTTTGTTTT+GGG | - | chr2_4:33498929-33498948 | Msa0325690:intron | 20.0% |
!! | AGATCTATAAATATTTGCAT+TGG | - | chr2_4:33499497-33499516 | Msa0325690:intron | 20.0% |
!! | CTTATATCCATAAACAAATA+AGG | + | chr2_4:33499526-33499545 | None:intergenic | 20.0% |
!!! | AGTTTTCTATGTTTTATGAT+GGG | - | chr2_4:33499681-33499700 | Msa0325690:intron | 20.0% |
!!! | TATTTTTTGATATTATAGGC+AGG | + | chr2_4:33499738-33499757 | None:intergenic | 20.0% |
!! | TAATCTCTTTGTTACAAAAT+AGG | - | chr2_4:33499906-33499925 | Msa0325690:CDS | 20.0% |
!!! | ATGAGATTTTATAAAACATG+GGG | + | chr2_4:33500116-33500135 | None:intergenic | 20.0% |
!!! | CATGAGATTTTATAAAACAT+GGG | + | chr2_4:33500117-33500136 | None:intergenic | 20.0% |
!!! | TCATGAGATTTTATAAAACA+TGG | + | chr2_4:33500118-33500137 | None:intergenic | 20.0% |
!!! | TTTTATAAAATCTCATGAAC+TGG | - | chr2_4:33500120-33500139 | Msa0325690:CDS | 20.0% |
!! | AACTTAAATGAAACTGAAAA+TGG | - | chr2_4:33500161-33500180 | Msa0325690:CDS | 20.0% |
!! | AAACTTGAAATTAAGATGAA+TGG | - | chr2_4:33501257-33501276 | Msa0325690:intron | 20.0% |
!! | AACTTGAAATTAAGATGAAT+GGG | - | chr2_4:33501258-33501277 | Msa0325690:intron | 20.0% |
!! | AAAATTGTTGCGTAAATTAT+GGG | - | chr2_4:33501593-33501612 | Msa0325690:intron | 20.0% |
!!! | TTTGGTAAAACTCATTTTAT+GGG | + | chr2_4:33501685-33501704 | None:intergenic | 20.0% |
!!! | ATTTGGTAAAACTCATTTTA+TGG | + | chr2_4:33501686-33501705 | None:intergenic | 20.0% |
!! | TAACACTTTATTGACATATT+TGG | + | chr2_4:33501703-33501722 | None:intergenic | 20.0% |
!! | ATCAAAAATAAAAATGCAAG+AGG | + | chr2_4:33502020-33502039 | None:intergenic | 20.0% |
!!! | TCTTGCATTTTTATTTTTGA+TGG | - | chr2_4:33502019-33502038 | Msa0325690:intron | 20.0% |
!!! | AAATTTTCATAACAGGTAAT+TGG | - | chr2_4:33502055-33502074 | Msa0325690:intron | 20.0% |
!! | ATAATCGTTCATACTTATTT+GGG | + | chr2_4:33503016-33503035 | None:intergenic | 20.0% |
!! | GAACAATTAATAAATATCTC+GGG | + | chr2_4:33503112-33503131 | None:intergenic | 20.0% |
!! | GATATCAAGGAAATTTATTA+AGG | - | chr2_4:33503487-33503506 | Msa0325690:intron | 20.0% |
!! | TATTTAAATTTAGTAGCAGT+CGG | - | chr2_4:33503989-33504008 | Msa0325690:intron | 20.0% |
! | GAGAGAGAGAAATTAAATAA+TGG | + | chr2_4:33498170-33498189 | None:intergenic | 25.0% |
!!! | AGAATCTTTTTTAAGAGAGA+GGG | + | chr2_4:33498282-33498301 | None:intergenic | 25.0% |
!! | TAACAAACCCATTTCATTTT+AGG | - | chr2_4:33498377-33498396 | Msa0325690:three_prime_UTR | 25.0% |
!! | TTTGGAACCTAAAATGAAAT+GGG | + | chr2_4:33498387-33498406 | None:intergenic | 25.0% |
!! | ATTTTTCTCTCAAGCTTTTT+AGG | - | chr2_4:33498413-33498432 | Msa0325690:three_prime_UTR | 25.0% |
!! | TTTTTCTCTCAAGCTTTTTA+GGG | - | chr2_4:33498414-33498433 | Msa0325690:three_prime_UTR | 25.0% |
! | AAATTGAAATACCTGAAAAG+GGG | + | chr2_4:33498447-33498466 | None:intergenic | 25.0% |
!!! | GGTGATTTTTGATTTTTTAG+GGG | - | chr2_4:33498597-33498616 | Msa0325690:CDS | 25.0% |
!!! | TTTTGATTTTTTAGGGGTTT+CGG | - | chr2_4:33498603-33498622 | Msa0325690:CDS | 25.0% |
!!! | GATTGTTGAAGTTATTTTCA+TGG | - | chr2_4:33498793-33498812 | Msa0325690:intron | 25.0% |
!!! | GTGTGAATTTCTTTTTGTTT+TGG | - | chr2_4:33498928-33498947 | Msa0325690:intron | 25.0% |
!!! | GTTTTAACATCTGATGAATT+TGG | - | chr2_4:33499322-33499341 | Msa0325690:intron | 25.0% |
!! | TTGGTTTCCTTATTTGTTTA+TGG | - | chr2_4:33499516-33499535 | Msa0325690:intron | 25.0% |
! | TGTATGAAATTTGACATCAA+TGG | - | chr2_4:33499549-33499568 | Msa0325690:intron | 25.0% |
!!! | CTTTTGGTTAAATTTGCAAT+AGG | + | chr2_4:33499600-33499619 | None:intergenic | 25.0% |
! | CTTCTACATCTAAAAGAATA+AGG | + | chr2_4:33499625-33499644 | None:intergenic | 25.0% |
!! | CTTATTCTTTTAGATGTAGA+AGG | - | chr2_4:33499623-33499642 | Msa0325690:CDS | 25.0% |
!! | CAGTTTTCTATGTTTTATGA+TGG | - | chr2_4:33499680-33499699 | Msa0325690:intron | 25.0% |
!!! | ATCTTTTTGTTTTTTGAGTG+AGG | - | chr2_4:33499764-33499783 | Msa0325690:intron | 25.0% |
!! | AATTTTCCAGCTGTATTTAT+AGG | + | chr2_4:33499948-33499967 | None:intergenic | 25.0% |
! | TATAAATACAGCTGGAAAAT+TGG | - | chr2_4:33499947-33499966 | Msa0325690:CDS | 25.0% |
! | ATAAATACAGCTGGAAAATT+GGG | - | chr2_4:33499948-33499967 | Msa0325690:CDS | 25.0% |
!! | CTTTAAAAATCTTCATCAAG+AGG | - | chr2_4:33500214-33500233 | Msa0325690:CDS | 25.0% |
! | GATGGTAATAATCATGTAAA+CGG | - | chr2_4:33500260-33500279 | Msa0325690:CDS | 25.0% |
!!! | TATGATCTTTTTGATAGTAG+TGG | - | chr2_4:33500380-33500399 | Msa0325690:CDS | 25.0% |
! | TCGAAATATTAACAGTAATG+TGG | - | chr2_4:33500583-33500602 | Msa0325690:CDS | 25.0% |
! | AAATATTAACAGTAATGTGG+AGG | - | chr2_4:33500586-33500605 | Msa0325690:CDS | 25.0% |
! | AAGATATTCTATTCAATCAG+AGG | + | chr2_4:33500710-33500729 | None:intergenic | 25.0% |
!!! | CTTTTCTTTTTTGACTTTGT+AGG | - | chr2_4:33501028-33501047 | Msa0325690:intron | 25.0% |
! | CAGCACTTAAATCATTAAAT+AGG | - | chr2_4:33501363-33501382 | Msa0325690:intron | 25.0% |
! | AAATTGAGAAACATTTGATG+AGG | - | chr2_4:33501547-33501566 | Msa0325690:intron | 25.0% |
!! | AACAATTTTCAAAAGTGGAA+AGG | + | chr2_4:33501582-33501601 | None:intergenic | 25.0% |
! | GAAAATTGTTGCGTAAATTA+TGG | - | chr2_4:33501592-33501611 | Msa0325690:intron | 25.0% |
! | ACAAATATAAATCATTCTCC+TGG | - | chr2_4:33502114-33502133 | Msa0325690:intron | 25.0% |
! | AAATCTTATTGGGAAATATG+TGG | + | chr2_4:33502269-33502288 | None:intergenic | 25.0% |
! | ACTTCAATGATGAATAATGT+TGG | - | chr2_4:33502660-33502679 | Msa0325690:intron | 25.0% |
! | TAAGTATAGAAGATCTCATT+CGG | + | chr2_4:33502800-33502819 | None:intergenic | 25.0% |
! | GATAATCGTTCATACTTATT+TGG | + | chr2_4:33503017-33503036 | None:intergenic | 25.0% |
! | ACATATACCTTAAAGTCAAT+TGG | + | chr2_4:33503217-33503236 | None:intergenic | 25.0% |
! | TAGAATGGAATAATAAGTGA+CGG | + | chr2_4:33503386-33503405 | None:intergenic | 25.0% |
!! | GGTTTGTATGAGAATATTTT+TGG | - | chr2_4:33503409-33503428 | Msa0325690:intron | 25.0% |
!!! | TCAAACTTGAATTTTGGAAA+TGG | + | chr2_4:33503672-33503691 | None:intergenic | 25.0% |
! | AATATACATATTGTTGGAGT+TGG | + | chr2_4:33504133-33504152 | None:intergenic | 25.0% |
! | TCTTCTCATATAAGGTTAAT+TGG | + | chr2_4:33504238-33504257 | None:intergenic | 25.0% |
! | GTAATTTGAATGTCAATATG+TGG | - | chr2_4:33504421-33504440 | Msa0325690:five_prime_UTR | 25.0% |
! | TTATGTTGATATCTTTGACA+CGG | - | chr2_4:33504606-33504625 | Msa0325690:five_prime_UTR | 25.0% |
!! | ATGGTTGTTTTCAATGGTTT+TGG | + | chr2_4:33498151-33498170 | None:intergenic | 30.0% |
!!! | GAGAATCTTTTTTAAGAGAG+AGG | + | chr2_4:33498283-33498302 | None:intergenic | 30.0% |
GTGAATGTGTTGAAAATAGT+GGG | + | chr2_4:33498332-33498351 | None:intergenic | 30.0% | |
TGTGAATGTGTTGAAAATAG+TGG | + | chr2_4:33498333-33498352 | None:intergenic | 30.0% | |
!! | CTTTGGAACCTAAAATGAAA+TGG | + | chr2_4:33498388-33498407 | None:intergenic | 30.0% |
!!! | CATTTCATTTTAGGTTCCAA+AGG | - | chr2_4:33498386-33498405 | Msa0325690:three_prime_UTR | 30.0% |
TGAGAGAAAAATAGAACCTT+TGG | + | chr2_4:33498405-33498424 | None:intergenic | 30.0% | |
ACGAAAACACATAAACAATC+GGG | + | chr2_4:33498516-33498535 | None:intergenic | 30.0% | |
GACGAAAACACATAAACAAT+CGG | + | chr2_4:33498517-33498536 | None:intergenic | 30.0% | |
ATGAGTGATTTATCATGCAA+TGG | - | chr2_4:33498757-33498776 | Msa0325690:intron | 30.0% | |
TGAGTGATTTATCATGCAAT+GGG | - | chr2_4:33498758-33498777 | Msa0325690:intron | 30.0% | |
AAAGCAGAGTTATTCACAAA+AGG | + | chr2_4:33498998-33499017 | None:intergenic | 30.0% | |
CCTAACTATAAGATTCAACT+AGG | + | chr2_4:33499155-33499174 | None:intergenic | 30.0% | |
CCTAGTTGAATCTTATAGTT+AGG | - | chr2_4:33499152-33499171 | Msa0325690:CDS | 30.0% | |
! | ATGTGAATAATTGGTGTTTC+AGG | + | chr2_4:33499217-33499236 | None:intergenic | 30.0% |
GTCATAGGTATGTGAATAAT+TGG | + | chr2_4:33499226-33499245 | None:intergenic | 30.0% | |
TGAGCAATATTATCAGTCAT+AGG | + | chr2_4:33499241-33499260 | None:intergenic | 30.0% | |
!! | GTTTAACTCTAAAATGAGGA+GGG | + | chr2_4:33499406-33499425 | None:intergenic | 30.0% |
!! | TCTGGTTTAACTCTAAAATG+AGG | + | chr2_4:33499410-33499429 | None:intergenic | 30.0% |
TAAATTTCTGCATGTACATC+TGG | + | chr2_4:33499428-33499447 | None:intergenic | 30.0% | |
TACATGCAGAAATTTATGCA+TGG | - | chr2_4:33499432-33499451 | Msa0325690:CDS | 30.0% | |
! | CTAAAAGAATAAGGAGCTTT+TGG | + | chr2_4:33499616-33499635 | None:intergenic | 30.0% |
AACCAGAATCAAGAACAATT+GGG | + | chr2_4:33499654-33499673 | None:intergenic | 30.0% | |
AAACCAGAATCAAGAACAAT+TGG | + | chr2_4:33499655-33499674 | None:intergenic | 30.0% | |
!! | TTTCTATGTTTTATGATGGG+TGG | - | chr2_4:33499684-33499703 | Msa0325690:intron | 30.0% |
TCTTTCGATCCTTCATTTAT+CGG | - | chr2_4:33499811-33499830 | Msa0325690:CDS | 30.0% | |
CAAGACAAAACAAGAGAATT+TGG | + | chr2_4:33499844-33499863 | None:intergenic | 30.0% | |
!!! | CAAATTCTCTTGTTTTGTCT+TGG | - | chr2_4:33499842-33499861 | Msa0325690:CDS | 30.0% |
TGTATTTATAGGTGGAATCT+TGG | + | chr2_4:33499937-33499956 | None:intergenic | 30.0% | |
TAAATACAGCTGGAAAATTG+GGG | - | chr2_4:33499949-33499968 | Msa0325690:CDS | 30.0% | |
! | AACACATACACTTTTCATGT+GGG | + | chr2_4:33500061-33500080 | None:intergenic | 30.0% |
! | TAACACATACACTTTTCATG+TGG | + | chr2_4:33500062-33500081 | None:intergenic | 30.0% |
ATGATTATTACCATCGTCAA+GGG | + | chr2_4:33500255-33500274 | None:intergenic | 30.0% | |
!!! | ATGGATGATTTTGACTTAAG+CGG | - | chr2_4:33500326-33500345 | Msa0325690:CDS | 30.0% |
ACCATTAGGTAAAGAATAAG+GGG | + | chr2_4:33500498-33500517 | None:intergenic | 30.0% | |
CACCATTAGGTAAAGAATAA+GGG | + | chr2_4:33500499-33500518 | None:intergenic | 30.0% | |
ACACCATTAGGTAAAGAATA+AGG | + | chr2_4:33500500-33500519 | None:intergenic | 30.0% | |
TTATTCTTTACCTAATGGTG+TGG | - | chr2_4:33500499-33500518 | Msa0325690:CDS | 30.0% | |
TATTCTTTACCTAATGGTGT+GGG | - | chr2_4:33500500-33500519 | Msa0325690:CDS | 30.0% | |
!! | GGTTAGTTTAAGTTAAAGTG+AGG | - | chr2_4:33500634-33500653 | Msa0325690:CDS | 30.0% |
AAAGCTACTAGTACAAACTA+TGG | - | chr2_4:33500665-33500684 | Msa0325690:CDS | 30.0% | |
GTGTTTACATGCAGTATATA+GGG | + | chr2_4:33500816-33500835 | None:intergenic | 30.0% | |
TGTGTTTACATGCAGTATAT+AGG | + | chr2_4:33500817-33500836 | None:intergenic | 30.0% | |
TATATACTGCATGTAAACAC+AGG | - | chr2_4:33500816-33500835 | Msa0325690:intron | 30.0% | |
ATATACTGCATGTAAACACA+GGG | - | chr2_4:33500817-33500836 | Msa0325690:intron | 30.0% | |
CATTGCAAAATAAACCTTTG+CGG | - | chr2_4:33500894-33500913 | Msa0325690:CDS | 30.0% | |
!! | CATTCACTTTTCAATACCAA+AGG | - | chr2_4:33500931-33500950 | Msa0325690:CDS | 30.0% |
CCAACATAATATGAATGACA+GGG | + | chr2_4:33501008-33501027 | None:intergenic | 30.0% | |
TGATTGATATCTTTGTCTGA+TGG | + | chr2_4:33501059-33501078 | None:intergenic | 30.0% | |
TCAGACAAAGATATCAATCA+AGG | - | chr2_4:33501059-33501078 | Msa0325690:intron | 30.0% | |
!! | AACCTTGGTAGTTTTCAATT+TGG | - | chr2_4:33501082-33501101 | Msa0325690:intron | 30.0% |
ATCCAAATTGAAAACTACCA+AGG | + | chr2_4:33501087-33501106 | None:intergenic | 30.0% | |
! | TTTTAACATCTGAGTCTTTC+AGG | - | chr2_4:33501194-33501213 | Msa0325690:intron | 30.0% |
TTTAACATCTGAGTCTTTCA+GGG | - | chr2_4:33501195-33501214 | Msa0325690:intron | 30.0% | |
TTGAAATTAAGATGAATGGG+TGG | - | chr2_4:33501261-33501280 | Msa0325690:intron | 30.0% | |
!! | GTGGATATTTTTGCAGATAA+GGG | - | chr2_4:33501280-33501299 | Msa0325690:intron | 30.0% |
AAGTGCGTACACTAATAATT+TGG | - | chr2_4:33501446-33501465 | Msa0325690:CDS | 30.0% | |
ACAATAACAATCTGTTCTTC+TGG | - | chr2_4:33501503-33501522 | Msa0325690:intron | 30.0% | |
! | TACGCAACAATTTTCAAAAG+TGG | + | chr2_4:33501587-33501606 | None:intergenic | 30.0% |
AATTACATGCCAGAAAACAA+AGG | + | chr2_4:33501790-33501809 | None:intergenic | 30.0% | |
ATTGAAGTTTCAGATGACTT+GGG | + | chr2_4:33502648-33502667 | None:intergenic | 30.0% | |
! | ATGAATAATGTTGGCTATAG+AGG | - | chr2_4:33502669-33502688 | Msa0325690:intron | 30.0% |
! | TGAATAATGTTGGCTATAGA+GGG | - | chr2_4:33502670-33502689 | Msa0325690:intron | 30.0% |
GGAAATTACATGCTTAATAG+TGG | - | chr2_4:33502711-33502730 | Msa0325690:intron | 30.0% | |
! | ATACTTAGCCCTGTATTTTT+AGG | - | chr2_4:33502813-33502832 | Msa0325690:CDS | 30.0% |
GACCATTACCTAAAAATACA+GGG | + | chr2_4:33502824-33502843 | None:intergenic | 30.0% | |
ATTGCAAATTGCAAGAATTC+GGG | + | chr2_4:33503294-33503313 | None:intergenic | 30.0% | |
CATTGCAAATTGCAAGAATT+CGG | + | chr2_4:33503295-33503314 | None:intergenic | 30.0% | |
TGCATTTATTCTGCAATTGA+GGG | + | chr2_4:33503331-33503350 | None:intergenic | 30.0% | |
TTGCATTTATTCTGCAATTG+AGG | + | chr2_4:33503332-33503351 | None:intergenic | 30.0% | |
ACTTATTATTCCATTCTACG+AGG | - | chr2_4:33503388-33503407 | Msa0325690:intron | 30.0% | |
! | GAAAAGGTTAATTTTTCCTC+AGG | - | chr2_4:33503522-33503541 | Msa0325690:intron | 30.0% |
GACGAATTCATTGATATGTT+TGG | - | chr2_4:33503546-33503565 | Msa0325690:intron | 30.0% | |
TAGTGAAAAAGTTGCTTCTT+TGG | - | chr2_4:33503609-33503628 | Msa0325690:intron | 30.0% | |
!! | ATTTTGGAAATGGTTTACGA+GGG | + | chr2_4:33503662-33503681 | None:intergenic | 30.0% |
!! | AATTTTGGAAATGGTTTACG+AGG | + | chr2_4:33503663-33503682 | None:intergenic | 30.0% |
! | CGTTCATCAAACTTGAATTT+TGG | + | chr2_4:33503678-33503697 | None:intergenic | 30.0% |
CTTCTCTGGTAATTGATATT+TGG | - | chr2_4:33503811-33503830 | Msa0325690:intron | 30.0% | |
! | TGGTAATTGATATTTGGAAC+TGG | - | chr2_4:33503817-33503836 | Msa0325690:intron | 30.0% |
! | TGATATTTGGAACTGGTATT+TGG | - | chr2_4:33503824-33503843 | Msa0325690:intron | 30.0% |
!! | TTTTCGTAGTATTTGTTGCT+AGG | - | chr2_4:33503860-33503879 | Msa0325690:intron | 30.0% |
AAGTATGGATGAAGACAATT+AGG | + | chr2_4:33504080-33504099 | None:intergenic | 30.0% | |
CTCCAACAATATGTATATTC+AGG | - | chr2_4:33504134-33504153 | Msa0325690:intron | 30.0% | |
TGCCTGAATATACATATTGT+TGG | + | chr2_4:33504139-33504158 | None:intergenic | 30.0% | |
ACTCTACATCTTCTCATATA+AGG | + | chr2_4:33504246-33504265 | None:intergenic | 30.0% | |
!! | TTCAAAAGTTTGGTGCATTT+CGG | - | chr2_4:33504317-33504336 | Msa0325690:intron | 30.0% |
!! | CTTCAGTTTTGCTCATTTTT+TGG | - | chr2_4:33504391-33504410 | Msa0325690:five_prime_UTR | 30.0% |
TTGTGAGAGAACGAAGAAAA+GGG | + | chr2_4:33498306-33498325 | None:intergenic | 35.0% | |
TTTGTGAGAGAACGAAGAAA+AGG | + | chr2_4:33498307-33498326 | None:intergenic | 35.0% | |
!! | TTGTTTAGCTTTGCATGCAA+CGG | - | chr2_4:33498570-33498589 | Msa0325690:CDS | 35.0% |
!! | TTTTTAGGGGTTTCGGTTAT+TGG | - | chr2_4:33498610-33498629 | Msa0325690:CDS | 35.0% |
!! | AATAACTCTGCTTTTGCATG+AGG | - | chr2_4:33499004-33499023 | Msa0325690:intron | 35.0% |
! | TTTTCACATTGCTTGCTTCA+CGG | - | chr2_4:33499053-33499072 | Msa0325690:intron | 35.0% |
AACTAGGTTTGACATAAGCA+GGG | + | chr2_4:33499139-33499158 | None:intergenic | 35.0% | |
! | ATAATTGGTGTTTCAGGCAA+TGG | + | chr2_4:33499211-33499230 | None:intergenic | 35.0% |
! | TGCTCATACATATCTGAAGT+TGG | - | chr2_4:33499255-33499274 | Msa0325690:intron | 35.0% |
CTTTGCAGTGAAATGTTATG+TGG | + | chr2_4:33499289-33499308 | None:intergenic | 35.0% | |
!! | GGTTTAACTCTAAAATGAGG+AGG | + | chr2_4:33499407-33499426 | None:intergenic | 35.0% |
TTTGCAATAGGAATTGTCAC+CGG | + | chr2_4:33499588-33499607 | None:intergenic | 35.0% | |
ATCCCAATTGTTCTTGATTC+TGG | - | chr2_4:33499649-33499668 | Msa0325690:CDS | 35.0% | |
GGAGATTTACCGATAAATGA+AGG | + | chr2_4:33499823-33499842 | None:intergenic | 35.0% | |
TTTATAGGTGGAATCTTGGA+AGG | + | chr2_4:33499933-33499952 | None:intergenic | 35.0% | |
ATTCCACCTATAAATACAGC+TGG | - | chr2_4:33499939-33499958 | Msa0325690:CDS | 35.0% | |
TTTCCAGCTGTATTTATAGG+TGG | + | chr2_4:33499945-33499964 | None:intergenic | 35.0% | |
! | GTTTCATTTAAGTTCACTGC+AGG | + | chr2_4:33500155-33500174 | None:intergenic | 35.0% |
GTTAGTTGAGATGTCATCAA+CGG | + | chr2_4:33500195-33500214 | None:intergenic | 35.0% | |
CATGATTATTACCATCGTCA+AGG | + | chr2_4:33500256-33500275 | None:intergenic | 35.0% | |
GTCAAAATCATCCATTATGC+CGG | + | chr2_4:33500321-33500340 | None:intergenic | 35.0% | |
!! | GATCTTTTTGATAGTAGTGG+AGG | - | chr2_4:33500383-33500402 | Msa0325690:CDS | 35.0% |
!! | TTTTGATAGTAGTGGAGGTT+TGG | - | chr2_4:33500388-33500407 | Msa0325690:CDS | 35.0% |
! | GTTAAGCTTTTCTGATAGCT+CGG | - | chr2_4:33500457-33500476 | Msa0325690:CDS | 35.0% |
CCATTAGGTAAAGAATAAGG+GGG | + | chr2_4:33500497-33500516 | None:intergenic | 35.0% | |
ATTCTATTCAATCAGAGGCA+AGG | + | chr2_4:33500705-33500724 | None:intergenic | 35.0% | |
TATACTGCATGTAAACACAG+GGG | - | chr2_4:33500818-33500837 | Msa0325690:intron | 35.0% | |
CTGTTTCAGTAAGAAACCTT+TGG | + | chr2_4:33500950-33500969 | None:intergenic | 35.0% | |
CCCTGTCATTCATATTATGT+TGG | - | chr2_4:33501005-33501024 | Msa0325690:intron | 35.0% | |
GCCAACATAATATGAATGAC+AGG | + | chr2_4:33501009-33501028 | None:intergenic | 35.0% | |
AGATATCAATCAAGGAACCT+TGG | - | chr2_4:33501067-33501086 | Msa0325690:intron | 35.0% | |
! | AGGTCTTCATTTGAAACTGA+TGG | + | chr2_4:33501110-33501129 | None:intergenic | 35.0% |
!! | GGTGGATATTTTTGCAGATA+AGG | - | chr2_4:33501279-33501298 | Msa0325690:intron | 35.0% |
TTAAATAGGAGTGACATAGC+TGG | - | chr2_4:33501377-33501396 | Msa0325690:CDS | 35.0% | |
TACTGAGACAGCCTTAATAT+TGG | - | chr2_4:33501650-33501669 | Msa0325690:CDS | 35.0% | |
GTTATGTGAGTAGAGAAACT+CGG | - | chr2_4:33501719-33501738 | Msa0325690:CDS | 35.0% | |
AAACAAAGGAGGCAGATATA+TGG | + | chr2_4:33501776-33501795 | None:intergenic | 35.0% | |
! | AGTTGGAGCATCAAACTAAA+AGG | + | chr2_4:33501832-33501851 | None:intergenic | 35.0% |
! | TCGAAGTTTTCGATATCAAG+TGG | - | chr2_4:33501879-33501898 | Msa0325690:CDS | 35.0% |
! | CGAAGTTTTCGATATCAAGT+GGG | - | chr2_4:33501880-33501899 | Msa0325690:CDS | 35.0% |
! | ATGCTACTTCATGATGACAA+TGG | + | chr2_4:33501965-33501984 | None:intergenic | 35.0% |
TGCAAAATTGAAGCTAATCC+CGG | + | chr2_4:33502177-33502196 | None:intergenic | 35.0% | |
! | TGAGTTGAAATTAGATCCAG+CGG | + | chr2_4:33502295-33502314 | None:intergenic | 35.0% |
!!! | TATGGACTAAATTTTGGCTC+TGG | + | chr2_4:33502327-33502346 | None:intergenic | 35.0% |
!! | CCACGATATGGACTAAATTT+TGG | + | chr2_4:33502333-33502352 | None:intergenic | 35.0% |
CCAAAATTTAGTCCATATCG+TGG | - | chr2_4:33502330-33502349 | Msa0325690:CDS | 35.0% | |
CATCAACTTAGTACATCGAA+TGG | - | chr2_4:33502492-33502511 | Msa0325690:CDS | 35.0% | |
! | AATTGTTCTGACTTGAGTAC+GGG | + | chr2_4:33502533-33502552 | None:intergenic | 35.0% |
! | GAATTGTTCTGACTTGAGTA+CGG | + | chr2_4:33502534-33502553 | None:intergenic | 35.0% |
CAACATCATCATCATCATGT+CGG | - | chr2_4:33502576-33502595 | Msa0325690:CDS | 35.0% | |
TTGAAGTTTCAGATGACTTG+GGG | + | chr2_4:33502647-33502666 | None:intergenic | 35.0% | |
CATTGAAGTTTCAGATGACT+TGG | + | chr2_4:33502649-33502668 | None:intergenic | 35.0% | |
! | GAATAATGTTGGCTATAGAG+GGG | - | chr2_4:33502671-33502690 | Msa0325690:intron | 35.0% |
! | AATAATGTTGGCTATAGAGG+GGG | - | chr2_4:33502672-33502691 | Msa0325690:intron | 35.0% |
ATGCTTAATAGTGGCATTTC+TGG | - | chr2_4:33502720-33502739 | Msa0325690:intron | 35.0% | |
AAGTTTGATGAACCATTGTC+AGG | + | chr2_4:33502777-33502796 | None:intergenic | 35.0% | |
!!! | AGCCCTGTATTTTTAGGTAA+TGG | - | chr2_4:33502819-33502838 | Msa0325690:CDS | 35.0% |
GGACCATTACCTAAAAATAC+AGG | + | chr2_4:33502825-33502844 | None:intergenic | 35.0% | |
! | ATAGCTTCTTGTTGTCAACT+TGG | + | chr2_4:33502926-33502945 | None:intergenic | 35.0% |
AGCTCGACTTAGATAAGATT+AGG | - | chr2_4:33502949-33502968 | Msa0325690:intron | 35.0% | |
GACTTAGATAAGATTAGGAG+TGG | - | chr2_4:33502954-33502973 | Msa0325690:intron | 35.0% | |
! | CATTTTTGATGTGTATCTGC+AGG | + | chr2_4:33503140-33503159 | None:intergenic | 35.0% |
TGCCATTGATGAAAATCACA+AGG | - | chr2_4:33503168-33503187 | Msa0325690:intron | 35.0% | |
GCCATTGATGAAAATCACAA+GGG | - | chr2_4:33503169-33503188 | Msa0325690:intron | 35.0% | |
TGGCAGATAGAGAAAATCAT+AGG | + | chr2_4:33503197-33503216 | None:intergenic | 35.0% | |
! | CTATCTGCCAATTGACTTTA+AGG | - | chr2_4:33503207-33503226 | Msa0325690:intron | 35.0% |
TTGCAAATTGCAAGAATTCG+GGG | + | chr2_4:33503293-33503312 | None:intergenic | 35.0% | |
TTTATTCTGCAATTGAGGGA+GGG | + | chr2_4:33503327-33503346 | None:intergenic | 35.0% | |
ATTTATTCTGCAATTGAGGG+AGG | + | chr2_4:33503328-33503347 | None:intergenic | 35.0% | |
TTGCAGAATAAATGCAACGT+CGG | - | chr2_4:33503335-33503354 | Msa0325690:intron | 35.0% | |
AAGGAAACGACAGTTAGAAA+AGG | - | chr2_4:33503506-33503525 | Msa0325690:intron | 35.0% | |
AAACTTTGTCTGTTCTTCTC+TGG | - | chr2_4:33503797-33503816 | Msa0325690:intron | 35.0% | |
GTATGATCTGCAAGAAAGTA+TGG | + | chr2_4:33504095-33504114 | None:intergenic | 35.0% | |
TACATATTGTTGGAGTTGGA+GGG | + | chr2_4:33504129-33504148 | None:intergenic | 35.0% | |
ATACATATTGTTGGAGTTGG+AGG | + | chr2_4:33504130-33504149 | None:intergenic | 35.0% | |
TTACAATTAAGCGATTCCTC+TGG | - | chr2_4:33504174-33504193 | Msa0325690:intron | 35.0% | |
TTGGCATCCAAACTCATAAA+AGG | + | chr2_4:33504219-33504238 | None:intergenic | 35.0% | |
! | TCTAGAGAGTAGTTAGTTTG+AGG | - | chr2_4:33504444-33504463 | Msa0325690:five_prime_UTR | 35.0% |
! | AGTAGTTAGTTTGAGGTTCA+GGG | - | chr2_4:33504451-33504470 | Msa0325690:five_prime_UTR | 35.0% |
AAGACTTTCTGACACATTAG+AGG | + | chr2_4:33504544-33504563 | None:intergenic | 35.0% | |
GGAGAGGAGAGAGTTTAAAA+AGG | + | chr2_4:33498227-33498246 | None:intergenic | 40.0% | |
! | TTTTAAACTCTCTCCTCTCC+TGG | - | chr2_4:33498227-33498246 | Msa0325690:three_prime_UTR | 40.0% |
TTTAAACTCTCTCCTCTCCT+GGG | - | chr2_4:33498228-33498247 | Msa0325690:three_prime_UTR | 40.0% | |
TGTGAGAGAACGAAGAAAAG+GGG | + | chr2_4:33498305-33498324 | None:intergenic | 40.0% | |
!!! | GTTTTGGGACTTTCTACGAA+TGG | - | chr2_4:33498944-33498963 | Msa0325690:intron | 40.0% |
CAACTAGGTTTGACATAAGC+AGG | + | chr2_4:33499140-33499159 | None:intergenic | 40.0% | |
GGATGACCATATCGAATGAA+CGG | - | chr2_4:33499173-33499192 | Msa0325690:CDS | 40.0% | |
GATGACCATATCGAATGAAC+GGG | - | chr2_4:33499174-33499193 | Msa0325690:CDS | 40.0% | |
ATGATCCCGTTCATTCGATA+TGG | + | chr2_4:33499182-33499201 | None:intergenic | 40.0% | |
ATTTCACTGCAAAGCTCAGA+TGG | - | chr2_4:33499295-33499314 | Msa0325690:intron | 40.0% | |
GCATGGCTATTATGCTCTTT+CGG | - | chr2_4:33499449-33499468 | Msa0325690:CDS | 40.0% | |
CATGGCTATTATGCTCTTTC+GGG | - | chr2_4:33499450-33499469 | Msa0325690:CDS | 40.0% | |
!!! | GTTTTTTGAGTGAGGCTGAA+AGG | - | chr2_4:33499772-33499791 | Msa0325690:intron | 40.0% |
TAACGAGCTAGAAAAGAGAC+TGG | + | chr2_4:33500030-33500049 | None:intergenic | 40.0% | |
AAACAGAAATCAGAGCTGGT+AGG | + | chr2_4:33500092-33500111 | None:intergenic | 40.0% | |
CATCAAGAGGCAGAACTTAA+CGG | - | chr2_4:33500227-33500246 | Msa0325690:CDS | 40.0% | |
ATACTCTTCCAAGTCCTCAA+GGG | + | chr2_4:33500363-33500382 | None:intergenic | 40.0% | |
! | TGGAGGTTTGGAACTAGAAA+CGG | - | chr2_4:33500400-33500419 | Msa0325690:CDS | 40.0% |
CCCCCTTATTCTTTACCTAA+TGG | - | chr2_4:33500494-33500513 | Msa0325690:CDS | 40.0% | |
CGAACAAACAATGTTCGAGA+AGG | + | chr2_4:33500566-33500585 | None:intergenic | 40.0% | |
GCTACTAGTACAAACTATGG+TGG | - | chr2_4:33500668-33500687 | Msa0325690:CDS | 40.0% | |
TCAGAGGCAAGGAGAAATAA+TGG | + | chr2_4:33500694-33500713 | None:intergenic | 40.0% | |
ATACTGCATGTAAACACAGG+GGG | - | chr2_4:33500819-33500838 | Msa0325690:intron | 40.0% | |
AAAATAAACCTTTGCGGCGA+AGG | - | chr2_4:33500900-33500919 | Msa0325690:CDS | 40.0% | |
AAGACCTCCGCCAAATATTT+GGG | - | chr2_4:33501123-33501142 | Msa0325690:intron | 40.0% | |
CATAAGCCCCAAATATTTGG+CGG | + | chr2_4:33501133-33501152 | None:intergenic | 40.0% | |
CTCCATAAGCCCCAAATATT+TGG | + | chr2_4:33501136-33501155 | None:intergenic | 40.0% | |
! | AATATTTGGGGCTTATGGAG+AGG | - | chr2_4:33501136-33501155 | Msa0325690:intron | 40.0% |
AACTTATGATGCCTCTTGTG+AGG | + | chr2_4:33501311-33501330 | None:intergenic | 40.0% | |
GCATAAAGCTTGAACCAAGT+CGG | - | chr2_4:33501405-33501424 | Msa0325690:CDS | 40.0% | |
! | ACTCATTTTATGGGACTGCA+AGG | + | chr2_4:33501676-33501695 | None:intergenic | 40.0% |
!!! | TATCTGCCTCCTTTGTTTTC+TGG | - | chr2_4:33501778-33501797 | Msa0325690:intron | 40.0% |
TACATGCCAGAAAACAAAGG+AGG | + | chr2_4:33501787-33501806 | None:intergenic | 40.0% | |
GAAAACTTCGAGACTCATCT+TGG | + | chr2_4:33501870-33501889 | None:intergenic | 40.0% | |
TTCATGATGACAATGGCACA+GGG | + | chr2_4:33501958-33501977 | None:intergenic | 40.0% | |
! | GTAAATGGTTGCTGGTTGTT+GGG | + | chr2_4:33502155-33502174 | None:intergenic | 40.0% |
AACAACCAGCAACCATTTAC+CGG | - | chr2_4:33502155-33502174 | Msa0325690:intron | 40.0% | |
TTGAAGCTAATCCCGGTAAA+TGG | + | chr2_4:33502170-33502189 | None:intergenic | 40.0% | |
CCAGCGGATGAAATCTTATT+GGG | + | chr2_4:33502279-33502298 | None:intergenic | 40.0% | |
TCCAGCGGATGAAATCTTAT+TGG | + | chr2_4:33502280-33502299 | None:intergenic | 40.0% | |
! | TTTGGTGCATCAACCTCAAA+TGG | - | chr2_4:33502366-33502385 | Msa0325690:CDS | 40.0% |
TTGGTGCATCAACCTCAAAT+GGG | - | chr2_4:33502367-33502386 | Msa0325690:CDS | 40.0% | |
CTTTCAAAAGGCAAACCTGA+AGG | + | chr2_4:33502609-33502628 | None:intergenic | 40.0% | |
!! | CTTCAGGTTTGCCTTTTGAA+AGG | - | chr2_4:33502607-33502626 | Msa0325690:CDS | 40.0% |
!!! | TTGCCTTTTGAAAGGCACTT+CGG | - | chr2_4:33502615-33502634 | Msa0325690:CDS | 40.0% |
! | AAACCGAAGTGCCTTTCAAA+AGG | + | chr2_4:33502621-33502640 | None:intergenic | 40.0% |
!! | AGTGGCATTTCTGGTAATGT+TGG | - | chr2_4:33502729-33502748 | Msa0325690:intron | 40.0% |
CCATTGTCAGGCATATTTCT+TGG | + | chr2_4:33502765-33502784 | None:intergenic | 40.0% | |
CCAAGAAATATGCCTGACAA+TGG | - | chr2_4:33502762-33502781 | Msa0325690:CDS | 40.0% | |
! | TTAGGTAATGGTCCTTATCC+AGG | - | chr2_4:33502831-33502850 | Msa0325690:CDS | 40.0% |
GTAAAACTCTCCATAGCAGT+AGG | + | chr2_4:33502864-33502883 | None:intergenic | 40.0% | |
! | AGAGTTTTACTGACCGTGTT+AGG | - | chr2_4:33502874-33502893 | Msa0325690:intron | 40.0% |
AGTAGATGGATCGACAACAA+TGG | - | chr2_4:33502897-33502916 | Msa0325690:intron | 40.0% | |
TTAGGAGTGGTGAAGATACA+AGG | - | chr2_4:33502967-33502986 | Msa0325690:intron | 40.0% | |
! | GCCCTTGTGATTTTCATCAA+TGG | + | chr2_4:33503173-33503192 | None:intergenic | 40.0% |
GGATGAAACAGAAACTCAAC+AGG | + | chr2_4:33503272-33503291 | None:intergenic | 40.0% | |
CTCATACAAACCTCGTAGAA+TGG | + | chr2_4:33503401-33503420 | None:intergenic | 40.0% | |
!! | TGCGGTTGATGATGATATCA+AGG | - | chr2_4:33503474-33503493 | Msa0325690:intron | 40.0% |
ATCAATGAATTCGTCACCTG+AGG | + | chr2_4:33503541-33503560 | None:intergenic | 40.0% | |
!!! | TTGGTTTTGCAGACATTCCA+TGG | - | chr2_4:33503565-33503584 | Msa0325690:intron | 40.0% |
!! | TGGTTTTGCAGACATTCCAT+GGG | - | chr2_4:33503566-33503585 | Msa0325690:intron | 40.0% |
! | GTAGTATTTGTTGCTAGGCT+TGG | - | chr2_4:33503865-33503884 | Msa0325690:intron | 40.0% |
ACATATTGTTGGAGTTGGAG+GGG | + | chr2_4:33504128-33504147 | None:intergenic | 40.0% | |
CTCATAAAAGGACCATCCTT+TGG | + | chr2_4:33504207-33504226 | None:intergenic | 40.0% | |
! | GGATGGTCCTTTTATGAGTT+TGG | - | chr2_4:33504209-33504228 | Msa0325690:intron | 40.0% |
GATGTAGAGTTGCTAACAGA+AGG | - | chr2_4:33504256-33504275 | Msa0325690:intron | 40.0% | |
!!! | ACCAAACTTTTGAAGCTTGC+TGG | + | chr2_4:33504311-33504330 | None:intergenic | 40.0% |
! | TTTCGGTGAATTTTCTGCAC+AGG | - | chr2_4:33504334-33504353 | Msa0325690:intron | 40.0% |
! | GAGTAGTTAGTTTGAGGTTC+AGG | - | chr2_4:33504450-33504469 | Msa0325690:five_prime_UTR | 40.0% |
TTAAACTCTCTCCTCTCCTG+GGG | - | chr2_4:33498229-33498248 | Msa0325690:three_prime_UTR | 45.0% | |
AGCTTTGCATGCAACGGTTA+TGG | - | chr2_4:33498576-33498595 | Msa0325690:CDS | 45.0% | |
TGGGACTTTCTACGAATGGA+AGG | - | chr2_4:33498948-33498967 | Msa0325690:intron | 45.0% | |
AGGTTTCGCTCTCGTCTAAT+TGG | - | chr2_4:33499024-33499043 | Msa0325690:intron | 45.0% | |
GGTTTCGCTCTCGTCTAATT+GGG | - | chr2_4:33499025-33499044 | Msa0325690:intron | 45.0% | |
GCAGGGTTGTGGTTAAACTA+CGG | + | chr2_4:33499122-33499141 | None:intergenic | 45.0% | |
GTTTGACATAAGCAGGGTTG+TGG | + | chr2_4:33499133-33499152 | None:intergenic | 45.0% | |
GTGAAACTGAGAACGTTGCT+AGG | - | chr2_4:33499347-33499366 | Msa0325690:intron | 45.0% | |
TCTTTCGGGAATGCTAGAGT+AGG | - | chr2_4:33499464-33499483 | Msa0325690:intron | 45.0% | |
! | CACTTTTCATGTGGGAGAAC+AGG | + | chr2_4:33500053-33500072 | None:intergenic | 45.0% |
GGGTAAACAGAAATCAGAGC+TGG | + | chr2_4:33500096-33500115 | None:intergenic | 45.0% | |
TTCGTCATCATCAGGAAGCA+TGG | + | chr2_4:33500288-33500307 | None:intergenic | 45.0% | |
AAGAGCTCTTCGTCATCATC+AGG | + | chr2_4:33500296-33500315 | None:intergenic | 45.0% | |
! | TGATGATGACGAAGAGCTCT+TGG | - | chr2_4:33500295-33500314 | Msa0325690:CDS | 45.0% |
CATACTCTTCCAAGTCCTCA+AGG | + | chr2_4:33500364-33500383 | None:intergenic | 45.0% | |
ACTTAGATATTCCCGCACTG+AGG | + | chr2_4:33500439-33500458 | None:intergenic | 45.0% | |
! | AGCTTTTCTGATAGCTCGGT+TGG | - | chr2_4:33500461-33500480 | Msa0325690:CDS | 45.0% |
TCTTTACCTAATGGTGTGGG+AGG | - | chr2_4:33500503-33500522 | Msa0325690:CDS | 45.0% | |
! | ATTATGACATCCGTGCTGCT+CGG | - | chr2_4:33500858-33500877 | Msa0325690:intron | 45.0% |
GAAGACCTCCGCCAAATATT+TGG | - | chr2_4:33501122-33501141 | Msa0325690:intron | 45.0% | |
AGACCTCCGCCAAATATTTG+GGG | - | chr2_4:33501124-33501143 | Msa0325690:intron | 45.0% | |
! | CGCCAAATATTTGGGGCTTA+TGG | - | chr2_4:33501131-33501150 | Msa0325690:intron | 45.0% |
TAAGGGAAACTCCTCACAAG+AGG | - | chr2_4:33501297-33501316 | Msa0325690:intron | 45.0% | |
GGACTGCAAGGCCAATATTA+AGG | + | chr2_4:33501664-33501683 | None:intergenic | 45.0% | |
GGTCAAGCTCTTGATTCAGT+TGG | + | chr2_4:33501849-33501868 | None:intergenic | 45.0% | |
ATCTCAAAGAACCAACCTGG+CGG | + | chr2_4:33501925-33501944 | None:intergenic | 45.0% | |
AGCATCTCAAAGAACCAACC+TGG | + | chr2_4:33501928-33501947 | None:intergenic | 45.0% | |
CTTCATGATGACAATGGCAC+AGG | + | chr2_4:33501959-33501978 | None:intergenic | 45.0% | |
GTCAACGAACTCTGCTCAAT+AGG | + | chr2_4:33502096-33502115 | None:intergenic | 45.0% | |
! | GGTAAATGGTTGCTGGTTGT+TGG | + | chr2_4:33502156-33502175 | None:intergenic | 45.0% |
ACAACCAGCAACCATTTACC+GGG | - | chr2_4:33502156-33502175 | Msa0325690:intron | 45.0% | |
TAATCCCGGTAAATGGTTGC+TGG | + | chr2_4:33502163-33502182 | None:intergenic | 45.0% | |
TTCACTGTGTTCGACAACTG+TGG | + | chr2_4:33502201-33502220 | None:intergenic | 45.0% | |
ACAGTTGTCGAACACAGTGA+AGG | - | chr2_4:33502200-33502219 | Msa0325690:CDS | 45.0% | |
TATGTCCTGGCCAATAGTTG+CGG | + | chr2_4:33502226-33502245 | None:intergenic | 45.0% | |
GACATAGGAAGGAGTAGTCA+TGG | - | chr2_4:33502240-33502259 | Msa0325690:CDS | 45.0% | |
CCCAATAAGATTTCATCCGC+TGG | - | chr2_4:33502276-33502295 | Msa0325690:CDS | 45.0% | |
GAGGACAAAGTTCCACGATA+TGG | + | chr2_4:33502345-33502364 | None:intergenic | 45.0% | |
!! | GTTGGCTCTGAGGATAAGTT+TGG | + | chr2_4:33502438-33502457 | None:intergenic | 45.0% |
!! | CTAAGTTGATGTCCCACAGA+TGG | + | chr2_4:33502483-33502502 | None:intergenic | 45.0% |
CTGCTGAGATGAACTGACAA+AGG | + | chr2_4:33502556-33502575 | None:intergenic | 45.0% | |
GTAGGTAGTAGTCCTGGATA+AGG | + | chr2_4:33502846-33502865 | None:intergenic | 45.0% | |
ATAGCAGTAGGTAGTAGTCC+TGG | + | chr2_4:33502852-33502871 | None:intergenic | 45.0% | |
AGGACTACTACCTACTGCTA+TGG | - | chr2_4:33502851-33502870 | Msa0325690:CDS | 45.0% | |
CGATCCATCTACTCCTAACA+CGG | + | chr2_4:33502890-33502909 | None:intergenic | 45.0% | |
AGACATTCCATGGGAAGAAG+TGG | - | chr2_4:33503575-33503594 | Msa0325690:intron | 45.0% | |
GACATTCCATGGGAAGAAGT+GGG | - | chr2_4:33503576-33503595 | Msa0325690:intron | 45.0% | |
CTGAGTGGAAGACAATAGGT+CGG | + | chr2_4:33503714-33503733 | None:intergenic | 45.0% | |
CCATCTGAGTGGAAGACAAT+AGG | + | chr2_4:33503718-33503737 | None:intergenic | 45.0% | |
CCTATTGTCTTCCACTCAGA+TGG | - | chr2_4:33503715-33503734 | Msa0325690:intron | 45.0% | |
GTGAAACAATGACGCAACCA+GGG | + | chr2_4:33504032-33504051 | None:intergenic | 45.0% | |
TGTGAAACAATGACGCAACC+AGG | + | chr2_4:33504033-33504052 | None:intergenic | 45.0% | |
! | TTCCTCTGGCTACTTTCCAA+AGG | - | chr2_4:33504188-33504207 | Msa0325690:intron | 45.0% |
! | ATCCTTTGGAAAGTAGCCAG+AGG | + | chr2_4:33504193-33504212 | None:intergenic | 45.0% |
! | TCTGGCTACTTTCCAAAGGA+TGG | - | chr2_4:33504192-33504211 | Msa0325690:intron | 45.0% |
GCCAGCAAGCTTCAAAAGTT+TGG | - | chr2_4:33504307-33504326 | Msa0325690:intron | 45.0% | |
! | GGTGAATTTTCTGCACAGGT+GGG | - | chr2_4:33504338-33504357 | Msa0325690:intron | 45.0% |
! | GTTAGTTTGAGGTTCAGGGT+TGG | - | chr2_4:33504455-33504474 | Msa0325690:five_prime_UTR | 45.0% |
!! | AGGGTTGGTAAGACTACATG+AGG | - | chr2_4:33504470-33504489 | Msa0325690:five_prime_UTR | 45.0% |
!! | GGGTTGGTAAGACTACATGA+GGG | - | chr2_4:33504471-33504490 | Msa0325690:five_prime_UTR | 45.0% |
!! | GGTTGGTAAGACTACATGAG+GGG | - | chr2_4:33504472-33504491 | Msa0325690:five_prime_UTR | 45.0% |
TAAACTCTCTCCTCTCCTGG+GGG | - | chr2_4:33498230-33498249 | Msa0325690:three_prime_UTR | 50.0% | |
TTAAGAGAGAGGGAAGAGCG+TGG | + | chr2_4:33498272-33498291 | None:intergenic | 50.0% | |
! | AGGGTTTCTCACCCCTTTTC+AGG | - | chr2_4:33498433-33498452 | Msa0325690:three_prime_UTR | 50.0% |
CGGTCAGTACAAAACGACAC+AGG | + | chr2_4:33499102-33499121 | None:intergenic | 50.0% | |
CAATGGCGTTCTGCTTCTAC+CGG | - | chr2_4:33499566-33499585 | Msa0325690:intron | 50.0% | |
ACAGCTGGAAAATTGGGGCA+TGG | - | chr2_4:33499954-33499973 | Msa0325690:CDS | 50.0% | |
AAAATTGGGGCATGGTGCGT+TGG | - | chr2_4:33499962-33499981 | Msa0325690:CDS | 50.0% | |
GGTGCGTTGGAAGTTTCATC+TGG | - | chr2_4:33499975-33499994 | Msa0325690:CDS | 50.0% | |
GACTGGCATCAGATGAAGCA+TGG | + | chr2_4:33500013-33500032 | None:intergenic | 50.0% | |
CTTAACGGTTCCCTTGACGA+TGG | - | chr2_4:33500242-33500261 | Msa0325690:CDS | 50.0% | |
CGGTTTACCTTGTTCCCTTG+AGG | - | chr2_4:33500346-33500365 | Msa0325690:CDS | 50.0% | |
ACCTTGTTCCCTTGAGGACT+TGG | - | chr2_4:33500352-33500371 | Msa0325690:CDS | 50.0% | |
TCCAAGTCCTCAAGGGAACA+AGG | + | chr2_4:33500356-33500375 | None:intergenic | 50.0% | |
GGAACTAGAAACGGATCCAC+AGG | - | chr2_4:33500409-33500428 | Msa0325690:CDS | 50.0% | |
TTACCTAATGGTGTGGGAGG+CGG | - | chr2_4:33500506-33500525 | Msa0325690:CDS | 50.0% | |
GTTGCTGGGGAACATCCATA+TGG | - | chr2_4:33500533-33500552 | Msa0325690:CDS | 50.0% | |
CGAGAAGGATGCTCTCCATA+TGG | + | chr2_4:33500551-33500570 | None:intergenic | 50.0% | |
ATGTGGAGGATACAGAGCTG+CGG | - | chr2_4:33500600-33500619 | Msa0325690:CDS | 50.0% | |
! | AGAGCTGCGGACTCTTTTTG+AGG | - | chr2_4:33500613-33500632 | Msa0325690:CDS | 50.0% |
TCAAGTTTCCTTCGCCGCAA+AGG | + | chr2_4:33500911-33500930 | None:intergenic | 50.0% | |
AAGCCCCAAATATTTGGCGG+AGG | + | chr2_4:33501130-33501149 | None:intergenic | 50.0% | |
GGCTTATGGAGAGGTCAAAG+AGG | - | chr2_4:33501145-33501164 | Msa0325690:intron | 50.0% | |
ACAGTGAAGGCCGCAACTAT+TGG | - | chr2_4:33502213-33502232 | Msa0325690:CDS | 50.0% | |
GCAACTATTGGCCAGGACAT+AGG | - | chr2_4:33502225-33502244 | Msa0325690:CDS | 50.0% | |
CTATTGGCCAGGACATAGGA+AGG | - | chr2_4:33502229-33502248 | Msa0325690:CDS | 50.0% | |
GACTACTCCTTCCTATGTCC+TGG | + | chr2_4:33502239-33502258 | None:intergenic | 50.0% | |
CGTGGAACTTTGTCCTCGTT+TGG | - | chr2_4:33502348-33502367 | Msa0325690:CDS | 50.0% | |
!! | TGAGGTTGATGCACCAAACG+AGG | + | chr2_4:33502364-33502383 | None:intergenic | 50.0% |
AACCTCAAATGGGTCGTCAG+TGG | - | chr2_4:33502377-33502396 | Msa0325690:CDS | 50.0% | |
TTCCACTGACGACCCATTTG+AGG | + | chr2_4:33502382-33502401 | None:intergenic | 50.0% | |
TAGAAACTGTGGAGCGGTCA+AGG | + | chr2_4:33502406-33502425 | None:intergenic | 50.0% | |
TGACCGCTCCACAGTTTCTA+TGG | - | chr2_4:33502406-33502425 | Msa0325690:CDS | 50.0% | |
GACCGCTCCACAGTTTCTAT+GGG | - | chr2_4:33502407-33502426 | Msa0325690:CDS | 50.0% | |
ACCGCTCCACAGTTTCTATG+GGG | - | chr2_4:33502408-33502427 | Msa0325690:CDS | 50.0% | |
TCCCCATAGAAACTGTGGAG+CGG | + | chr2_4:33502412-33502431 | None:intergenic | 50.0% | |
GGACTTCCCCATAGAAACTG+TGG | + | chr2_4:33502417-33502436 | None:intergenic | 50.0% | |
!! | TGAAGGTTTGGTTGGCTCTG+AGG | + | chr2_4:33502448-33502467 | None:intergenic | 50.0% |
AGCCAACCAAACCTTCAGCT+TGG | - | chr2_4:33502451-33502470 | Msa0325690:CDS | 50.0% | |
! | GACCAAGCTGAAGGTTTGGT+TGG | + | chr2_4:33502456-33502475 | None:intergenic | 50.0% |
CCTTGACCAAGCTGAAGGTT+TGG | + | chr2_4:33502460-33502479 | None:intergenic | 50.0% | |
CCAAACCTTCAGCTTGGTCA+AGG | - | chr2_4:33502457-33502476 | Msa0325690:CDS | 50.0% | |
TTGGCTATAGAGGGGGTCTA+GGG | - | chr2_4:33502679-33502698 | Msa0325690:intron | 50.0% | |
CTGACCGTGTTAGGAGTAGA+TGG | - | chr2_4:33502883-33502902 | Msa0325690:intron | 50.0% | |
ACTTCTCCCACTTCTTCCCA+TGG | + | chr2_4:33503585-33503604 | None:intergenic | 50.0% | |
TTGGCGTATGCTCGAATCCA+AGG | - | chr2_4:33503628-33503647 | Msa0325690:intron | 50.0% | |
TGGCGTATGCTCGAATCCAA+GGG | - | chr2_4:33503629-33503648 | Msa0325690:intron | 50.0% | |
!! | TTACGAGGGCATTCTTCCCT+TGG | + | chr2_4:33503648-33503667 | None:intergenic | 50.0% |
CAGCTTCAGAACCATCTGAG+TGG | + | chr2_4:33503729-33503748 | None:intergenic | 50.0% | |
!! | TGGTTCTGAAGCTGCTGATC+AGG | - | chr2_4:33503735-33503754 | Msa0325690:intron | 50.0% |
! | CGGTGAATTTTCTGCACAGG+TGG | - | chr2_4:33504337-33504356 | Msa0325690:intron | 50.0% |
AGGTGGGAGCAAAAGCTGAA+GGG | - | chr2_4:33504354-33504373 | Msa0325690:intron | 50.0% | |
! | GATGATTGGTTGTGACCCCC+AGG | + | chr2_4:33498248-33498267 | None:intergenic | 55.0% |
GATGACGAAGAGCTCTTGGC+CGG | - | chr2_4:33500299-33500318 | Msa0325690:CDS | 55.0% | |
AGAGCTCTTGGCCGGCATAA+TGG | - | chr2_4:33500307-33500326 | Msa0325690:CDS | 55.0% | |
TCCACAGGAAAGCCTCAGTG+CGG | - | chr2_4:33500424-33500443 | Msa0325690:CDS | 55.0% | |
AAGCTTGAACCAAGTCGGCC+TGG | - | chr2_4:33501410-33501429 | Msa0325690:CDS | 55.0% | |
! | CAAGTGGGTTCACCTCTAGC+CGG | - | chr2_4:33501895-33501914 | Msa0325690:CDS | 55.0% |
! | GATGGCCTTGACCAAGCTGA+AGG | + | chr2_4:33502465-33502484 | None:intergenic | 55.0% |
AGCTTGGTCAAGGCCATCTG+TGG | - | chr2_4:33502467-33502486 | Msa0325690:CDS | 55.0% | |
GCTTGGTCAAGGCCATCTGT+GGG | - | chr2_4:33502468-33502487 | Msa0325690:CDS | 55.0% | |
!! | CATGTCGGTTCTGCTCCTTC+AGG | - | chr2_4:33502591-33502610 | Msa0325690:CDS | 55.0% |
GTTGGCTATAGAGGGGGTCT+AGG | - | chr2_4:33502678-33502697 | Msa0325690:intron | 55.0% | |
TGTCTACGTCTCGTTGTCCC+TGG | - | chr2_4:33504012-33504031 | Msa0325690:intron | 55.0% | |
CAGGTGGGAGCAAAAGCTGA+AGG | - | chr2_4:33504353-33504372 | Msa0325690:intron | 55.0% | |
TTGGTTGTGACCCCCAGGAG+AGG | + | chr2_4:33498243-33498262 | None:intergenic | 60.0% | |
! | GGGAAGAGCGTGGCGATGAT+TGG | + | chr2_4:33498262-33498281 | None:intergenic | 60.0% |
CCACAGGAAAGCCTCAGTGC+GGG | - | chr2_4:33500425-33500444 | Msa0325690:CDS | 60.0% | |
GCATAGCTGTCCGAGCAGCA+CGG | + | chr2_4:33500871-33500890 | None:intergenic | 60.0% | |
CTTGAACCAAGTCGGCCTGG+AGG | - | chr2_4:33501413-33501432 | Msa0325690:CDS | 60.0% | |
GAAGGCCGCAACTATTGGCC+AGG | - | chr2_4:33502218-33502237 | Msa0325690:CDS | 60.0% | |
! | GGGGGTCTAGGGCACAATGA+TGG | - | chr2_4:33502690-33502709 | Msa0325690:intron | 60.0% |
CCCGCACTGAGGCTTTCCTG+TGG | + | chr2_4:33500428-33500447 | None:intergenic | 65.0% | |
GCTCCGCCTCCCACACCATT+AGG | + | chr2_4:33500512-33500531 | None:intergenic | 65.0% | |
TGGGAGGCGGAGCTGTTGCT+GGG | - | chr2_4:33500519-33500538 | Msa0325690:CDS | 65.0% | |
CACTTGCGACGAGCTCCTCC+AGG | + | chr2_4:33501431-33501450 | None:intergenic | 65.0% | |
GAACCAACCTGGCGGAGAGC+CGG | + | chr2_4:33501917-33501936 | None:intergenic | 65.0% | |
GTGGGAGGCGGAGCTGTTGC+TGG | - | chr2_4:33500518-33500537 | Msa0325690:CDS | 70.0% | |
GGGAGGCGGAGCTGTTGCTG+GGG | - | chr2_4:33500520-33500539 | Msa0325690:CDS | 70.0% | |
CGAGCTCCTCCAGGCCGACT+TGG | + | chr2_4:33501422-33501441 | None:intergenic | 70.0% | |
! | TAGCCGGCTCTCCGCCAGGT+TGG | - | chr2_4:33501911-33501930 | Msa0325690:CDS | 70.0% |
CCTGGCGGAGAGCCGGCTAG+AGG | + | chr2_4:33501910-33501929 | None:intergenic | 75.0% | |
! | CCTCTAGCCGGCTCTCCGCC+AGG | - | chr2_4:33501907-33501926 | Msa0325690:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_4 | gene | 33498146 | 33504666 | 33498146 | ID=Msa0325690;Name=Msa0325690 |
chr2_4 | mRNA | 33498146 | 33504666 | 33498146 | ID=Msa0325690-mRNA-1;Parent=Msa0325690;Name=Msa0325690-mRNA-1;_AED=0.14;_eAED=0.14;_QI=329|1|1|1|0.91|0.84|13|424|863 |
chr2_4 | exon | 33498146 | 33498704 | 33498146 | ID=Msa0325690-mRNA-1:exon:10799;Parent=Msa0325690-mRNA-1 |
chr2_4 | exon | 33499056 | 33499235 | 33499056 | ID=Msa0325690-mRNA-1:exon:10798;Parent=Msa0325690-mRNA-1 |
chr2_4 | exon | 33499403 | 33499471 | 33499403 | ID=Msa0325690-mRNA-1:exon:10797;Parent=Msa0325690-mRNA-1 |
chr2_4 | exon | 33499584 | 33499668 | 33499584 | ID=Msa0325690-mRNA-1:exon:10796;Parent=Msa0325690-mRNA-1 |
chr2_4 | exon | 33499791 | 33500742 | 33499791 | ID=Msa0325690-mRNA-1:exon:10795;Parent=Msa0325690-mRNA-1 |
chr2_4 | exon | 33500884 | 33500975 | 33500884 | ID=Msa0325690-mRNA-1:exon:10794;Parent=Msa0325690-mRNA-1 |
chr2_4 | exon | 33501365 | 33501516 | 33501365 | ID=Msa0325690-mRNA-1:exon:10793;Parent=Msa0325690-mRNA-1 |
chr2_4 | exon | 33501646 | 33501762 | 33501646 | ID=Msa0325690-mRNA-1:exon:10792;Parent=Msa0325690-mRNA-1 |
chr2_4 | exon | 33501860 | 33502018 | 33501860 | ID=Msa0325690-mRNA-1:exon:10791;Parent=Msa0325690-mRNA-1 |
chr2_4 | exon | 33502178 | 33502653 | 33502178 | ID=Msa0325690-mRNA-1:exon:10790;Parent=Msa0325690-mRNA-1 |
chr2_4 | exon | 33502741 | 33502884 | 33502741 | ID=Msa0325690-mRNA-1:exon:10789;Parent=Msa0325690-mRNA-1 |
chr2_4 | exon | 33502980 | 33503030 | 33502980 | ID=Msa0325690-mRNA-1:exon:10788;Parent=Msa0325690-mRNA-1 |
chr2_4 | exon | 33504358 | 33504666 | 33504358 | ID=Msa0325690-mRNA-1:exon:10787;Parent=Msa0325690-mRNA-1 |
chr2_4 | five_prime_UTR | 33504358 | 33504666 | 33504358 | ID=Msa0325690-mRNA-1:five_prime_utr;Parent=Msa0325690-mRNA-1 |
chr2_4 | five_prime_UTR | 33503011 | 33503030 | 33503011 | ID=Msa0325690-mRNA-1:five_prime_utr;Parent=Msa0325690-mRNA-1 |
chr2_4 | CDS | 33502980 | 33503010 | 33502980 | ID=Msa0325690-mRNA-1:cds;Parent=Msa0325690-mRNA-1 |
chr2_4 | CDS | 33502741 | 33502884 | 33502741 | ID=Msa0325690-mRNA-1:cds;Parent=Msa0325690-mRNA-1 |
chr2_4 | CDS | 33502178 | 33502653 | 33502178 | ID=Msa0325690-mRNA-1:cds;Parent=Msa0325690-mRNA-1 |
chr2_4 | CDS | 33501860 | 33502018 | 33501860 | ID=Msa0325690-mRNA-1:cds;Parent=Msa0325690-mRNA-1 |
chr2_4 | CDS | 33501646 | 33501762 | 33501646 | ID=Msa0325690-mRNA-1:cds;Parent=Msa0325690-mRNA-1 |
chr2_4 | CDS | 33501365 | 33501516 | 33501365 | ID=Msa0325690-mRNA-1:cds;Parent=Msa0325690-mRNA-1 |
chr2_4 | CDS | 33500884 | 33500975 | 33500884 | ID=Msa0325690-mRNA-1:cds;Parent=Msa0325690-mRNA-1 |
chr2_4 | CDS | 33499791 | 33500742 | 33499791 | ID=Msa0325690-mRNA-1:cds;Parent=Msa0325690-mRNA-1 |
chr2_4 | CDS | 33499584 | 33499668 | 33499584 | ID=Msa0325690-mRNA-1:cds;Parent=Msa0325690-mRNA-1 |
chr2_4 | CDS | 33499403 | 33499471 | 33499403 | ID=Msa0325690-mRNA-1:cds;Parent=Msa0325690-mRNA-1 |
chr2_4 | CDS | 33499056 | 33499235 | 33499056 | ID=Msa0325690-mRNA-1:cds;Parent=Msa0325690-mRNA-1 |
chr2_4 | CDS | 33498570 | 33498704 | 33498570 | ID=Msa0325690-mRNA-1:cds;Parent=Msa0325690-mRNA-1 |
chr2_4 | three_prime_UTR | 33498146 | 33498569 | 33498146 | ID=Msa0325690-mRNA-1:three_prime_utr;Parent=Msa0325690-mRNA-1 |
Gene Sequence |
Protein sequence |