Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1207790 | XP_003608766.2 | 95.951 | 494 | 20 | 0 | 10 | 503 | 1 | 494 | 0.0 | 956 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1207790 | sp|P49045|VPE_SOYBN | 82.128 | 470 | 83 | 1 | 34 | 503 | 27 | 495 | 0.0 | 835 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0056930 | Msa1207790 | 0.818662 | 1.743663e-52 | -8.615850e-47 |
| Msa0057010 | Msa1207790 | 0.800447 | 1.435402e-48 | -8.615850e-47 |
| Msa0095920 | Msa1207790 | 0.840656 | 7.626490e-58 | -8.615850e-47 |
| Msa0108490 | Msa1207790 | -0.819354 | 1.214021e-52 | -8.615850e-47 |
| Msa0172740 | Msa1207790 | 0.800247 | 1.576223e-48 | -8.615850e-47 |
| Msa0325690 | Msa1207790 | 0.811512 | 6.745865e-51 | -8.615850e-47 |
| Msa1131880 | Msa1207790 | 0.815253 | 1.016365e-51 | -8.615850e-47 |
| Msa1207790 | Msa1207800 | 0.986679 | 1.339049e-167 | -8.615850e-47 |
| Msa1207790 | Msa1257840 | 0.933469 | 1.789455e-95 | -8.615850e-47 |
| Msa1207790 | Msa1329130 | 0.973124 | 6.695399e-136 | -8.615850e-47 |
| Msa1207790 | Msa1329210 | 0.976642 | 3.224404e-142 | -8.615850e-47 |
| Msa1207790 | Msa1412370 | 0.840836 | 6.841032e-58 | -8.615850e-47 |
| Msa1207790 | Msa1440270 | 0.805495 | 1.298520e-49 | -8.615850e-47 |
| Msa0940130 | Msa1207790 | 0.800857 | 1.183671e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1207790 | MtrunA17_Chr4g0056561 | 95.951 | 494 | 20 | 0 | 10 | 503 | 1 | 494 | 0.0 | 956 |
| Msa1207790 | MtrunA17_Chr3g0135491 | 56.803 | 463 | 195 | 3 | 28 | 486 | 6 | 467 | 0.0 | 561 |
| Msa1207790 | MtrunA17_Chr1g0151801 | 55.622 | 498 | 203 | 6 | 16 | 503 | 4 | 493 | 0.0 | 535 |
| Msa1207790 | MtrunA17_Chr7g0248651 | 44.770 | 478 | 236 | 4 | 20 | 486 | 9 | 469 | 7.39e-145 | 424 |
| Msa1207790 | MtrunA17_Chr7g0246051 | 52.490 | 261 | 113 | 2 | 27 | 287 | 16 | 265 | 3.83e-95 | 289 |
| Msa1207790 | MtrunA17_Chr7g0226421 | 65.891 | 129 | 44 | 0 | 65 | 193 | 31 | 159 | 5.07e-55 | 181 |
| Msa1207790 | MtrunA17_Chr7g0226441 | 37.500 | 208 | 106 | 3 | 293 | 486 | 1 | 198 | 1.02e-41 | 148 |
| Msa1207790 | MtrunA17_Chr7g0246061 | 34.737 | 190 | 109 | 4 | 305 | 488 | 8 | 188 | 2.53e-28 | 111 |
| Msa1207790 | MtrunA17_Chr7g0226431 | 66.667 | 63 | 21 | 0 | 225 | 287 | 1 | 63 | 1.86e-26 | 102 |
| Msa1207790 | MtrunA17_Chr2g0307771 | 26.794 | 209 | 135 | 4 | 28 | 234 | 18 | 210 | 1.28e-17 | 85.1 |
| Msa1207790 | MtrunA17_Chr1g0193781 | 25.000 | 184 | 135 | 3 | 56 | 237 | 21 | 203 | 8.98e-16 | 77.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1207790 | AT1G62710.1 | 70.172 | 466 | 133 | 3 | 42 | 503 | 23 | 486 | 0.0 | 693 |
| Msa1207790 | AT4G32940.1 | 60.684 | 468 | 176 | 4 | 43 | 503 | 28 | 494 | 0.0 | 551 |
| Msa1207790 | AT2G25940.1 | 59.041 | 459 | 182 | 4 | 49 | 503 | 22 | 478 | 0.0 | 533 |
| Msa1207790 | AT3G20210.1 | 47.113 | 433 | 223 | 3 | 57 | 486 | 35 | 464 | 7.44e-132 | 390 |
| Msa1207790 | AT1G08750.3 | 24.204 | 314 | 201 | 8 | 69 | 377 | 28 | 309 | 2.90e-18 | 87.0 |
| Msa1207790 | AT1G08750.2 | 24.204 | 314 | 201 | 8 | 69 | 377 | 28 | 309 | 2.90e-18 | 87.0 |
| Msa1207790 | AT1G08750.1 | 24.204 | 314 | 201 | 8 | 69 | 377 | 28 | 309 | 2.90e-18 | 87.0 |
Find 156 sgRNAs with CRISPR-Local
Find 419 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCATATACATACGGCATATT+TGG | 0.217041 | 8_1:-65548327 | None:intergenic |
| AAGACAAATTAAATTAAATT+AGG | 0.218095 | 8_1:+65550453 | Msa1207790:three_prime_UTR |
| GCGAGTCACACAATCTAAAA+AGG | 0.244722 | 8_1:+65549022 | Msa1207790:intron |
| AACCTATACGCTGTCATTCT+TGG | 0.266606 | 8_1:+65547928 | Msa1207790:CDS |
| ACTTTGTGTGGTACACTATA+TGG | 0.275074 | 8_1:+65550101 | Msa1207790:exon |
| TGACAAACTAGGATCTAAAA+TGG | 0.296605 | 8_1:+65549317 | Msa1207790:CDS |
| CGGTGTTTCTGAGGATTCTA+TGG | 0.301877 | 8_1:+65550002 | Msa1207790:CDS |
| AACAGTTTCTACTTTATCTT+AGG | 0.305913 | 8_1:-65550286 | None:intergenic |
| AATTACAACAACTATGCATT+AGG | 0.321118 | 8_1:+65549195 | Msa1207790:CDS |
| GCATACCAGTTGTTGATAAA+AGG | 0.328829 | 8_1:+65544164 | Msa1207790:CDS |
| TGTGGGTCACTGACACAGTA+TGG | 0.329644 | 8_1:+65549940 | Msa1207790:CDS |
| ATAAAATCTCTGCATCTCTT+TGG | 0.334302 | 8_1:-65549350 | None:intergenic |
| GTCTACCTCTTGTTGATGAT+TGG | 0.335492 | 8_1:+65549646 | Msa1207790:CDS |
| CTCGTCAATTGTGAAATTGC+TGG | 0.336695 | 8_1:+65550157 | Msa1207790:three_prime_UTR |
| CATGGAGGCCCCGGAGTTCT+TGG | 0.345994 | 8_1:+65548033 | Msa1207790:CDS |
| GATGGTAGCGTGGAATTGAT+TGG | 0.366010 | 8_1:+65549564 | Msa1207790:CDS |
| GGAGGAAGGTTCACCGTTGC+AGG | 0.366394 | 8_1:-65549288 | None:intergenic |
| GCACTATAACCTGTGTTTGA+TGG | 0.369666 | 8_1:-65550075 | None:intergenic |
| ACATTATGTTGAACATATAT+TGG | 0.373351 | 8_1:-65550223 | None:intergenic |
| TCTACCTCTTGTTGATGATT+GGG | 0.402654 | 8_1:+65549647 | Msa1207790:CDS |
| CTGGTGAAACAAATATTAAT+AGG | 0.403635 | 8_1:-65550483 | None:intergenic |
| CCAATGCACAAGAGAGTAGT+TGG | 0.407355 | 8_1:+65548580 | Msa1207790:CDS |
| GGACTCAGTGATTAGATTGC+CGG | 0.407627 | 8_1:+65543863 | Msa1207790:CDS |
| ACATAAACATTAAGATCCTT+TGG | 0.408253 | 8_1:-65548546 | None:intergenic |
| TTTATATATTACTCCGATCA+TGG | 0.414926 | 8_1:+65548015 | Msa1207790:CDS |
| CAGAGTACATCACTTGCCTT+GGG | 0.421295 | 8_1:+65548640 | Msa1207790:CDS |
| TTTCCGGTGTCCTATCTTTG+TGG | 0.425462 | 8_1:+65543778 | Msa1207790:CDS |
| GGTTCTCATGTGATGCAATA+TGG | 0.435826 | 8_1:+65549216 | Msa1207790:CDS |
| ACAACCATGGCCACAAAGAT+AGG | 0.436475 | 8_1:-65543788 | None:intergenic |
| ATTGGGAATGCTTAAAATCA+AGG | 0.438195 | 8_1:+65549664 | Msa1207790:CDS |
| AAAAGGTTCTTCAGTTCTAC+AGG | 0.438706 | 8_1:+65549608 | Msa1207790:CDS |
| TTTGTGGCCATGGTTGTTGT+TGG | 0.441289 | 8_1:+65543794 | Msa1207790:CDS |
| CCAACTACTCTCTTGTGCAT+TGG | 0.445049 | 8_1:-65548580 | None:intergenic |
| GGGATTTGTATAGTGTTGCT+TGG | 0.446757 | 8_1:+65548661 | Msa1207790:CDS |
| GTAATTTGCAATTGAGAGAA+TGG | 0.447007 | 8_1:+65550357 | Msa1207790:three_prime_UTR |
| CGATGGGCTGTTCTTGTGGC+TGG | 0.450770 | 8_1:+65543927 | Msa1207790:CDS |
| TCAACAGCAAATCCGAAGAT+AGG | 0.454259 | 8_1:+65547989 | Msa1207790:CDS |
| TTGAAGAAGAAACATGCATC+TGG | 0.455830 | 8_1:+65548369 | Msa1207790:CDS |
| GTGGCTGGTTCAAGTGGTTA+CGG | 0.456132 | 8_1:+65543942 | Msa1207790:CDS |
| TTTGTATAGTGTTGCTTGGA+TGG | 0.457289 | 8_1:+65548665 | Msa1207790:CDS |
| ATATATAAATATCCTATCTT+CGG | 0.458355 | 8_1:-65548001 | None:intergenic |
| AAGATAAAGTAGAAACTGTT+GGG | 0.472867 | 8_1:+65550289 | Msa1207790:three_prime_UTR |
| ATGTACTCTGGAGGTGGAGC+AGG | 0.473851 | 8_1:-65548627 | None:intergenic |
| TTACTGTTTGGTCCAACAAA+AGG | 0.476498 | 8_1:+65549591 | Msa1207790:CDS |
| CCAGAGTACATCACTTGCCT+TGG | 0.478537 | 8_1:+65548639 | Msa1207790:CDS |
| AAACATAGGAATCATTTAGA+TGG | 0.482034 | 8_1:+65549546 | Msa1207790:CDS |
| TACTCCGATCATGGAGGCCC+CGG | 0.482412 | 8_1:+65548024 | Msa1207790:CDS |
| GGTGAAACAACAATACAAAT+CGG | 0.482608 | 8_1:+65549050 | Msa1207790:CDS |
| CCTTGAGAAGATTGCGGAGA+CGG | 0.485427 | 8_1:+65549521 | Msa1207790:CDS |
| CAATGCACAAGAGAGTAGTT+GGG | 0.486134 | 8_1:+65548581 | Msa1207790:CDS |
| GTGTCCTATCTTTGTGGCCA+TGG | 0.487261 | 8_1:+65543784 | Msa1207790:CDS |
| CTACAGGCTCTTAGAGAACC+TGG | 0.489099 | 8_1:+65549624 | Msa1207790:CDS |
| ACATATATTGGAGGCGCATA+GGG | 0.489470 | 8_1:-65550211 | None:intergenic |
| GGTGGAGCAGGTTCCACTCC+AGG | 0.496020 | 8_1:-65548615 | None:intergenic |
| TAGATTGCCGGGTGAGGTGG+TGG | 0.496322 | 8_1:+65543875 | Msa1207790:CDS |
| AACATATATTGGAGGCGCAT+AGG | 0.498831 | 8_1:-65550212 | None:intergenic |
| CCTCCTCACAATGACAAACT+AGG | 0.499499 | 8_1:+65549306 | Msa1207790:CDS |
| CTCCAAGAATGACAGCGTAT+AGG | 0.502835 | 8_1:-65547930 | None:intergenic |
| ATATCATACAAAAGATTACT+AGG | 0.503156 | 8_1:+65543523 | None:intergenic |
| TGTTTATGTCGGCGTTCCTA+AGG | 0.503472 | 8_1:+65544292 | Msa1207790:CDS |
| AGTTGGGGAACTTACTGTCC+TGG | 0.508806 | 8_1:+65548597 | Msa1207790:CDS |
| AACTCCGGGGCCTCCATGAT+CGG | 0.509290 | 8_1:-65548028 | None:intergenic |
| AGGTGACACGTTATATCTGT+TGG | 0.510064 | 8_1:-65543626 | None:intergenic |
| TGGAGACAAGAGTAAAGTAA+AGG | 0.513486 | 8_1:+65547948 | Msa1207790:CDS |
| CTAACAACGAGTTGAATCCT+AGG | 0.515685 | 8_1:+65544234 | Msa1207790:CDS |
| GTGTTGCTTGGATGGAAGAC+AGG | 0.519440 | 8_1:+65548673 | Msa1207790:CDS |
| AACGAGTTGAATCCTAGGCC+TGG | 0.520309 | 8_1:+65544239 | Msa1207790:CDS |
| TGAAAGTGGTAGCATGTTTG+AGG | 0.520691 | 8_1:+65548515 | Msa1207790:CDS |
| GAGTCCCACTCTGAACGGTT+CGG | 0.523971 | 8_1:-65543846 | None:intergenic |
| TTGTTGGTGCTCACTTTGAA+CGG | 0.525568 | 8_1:+65543810 | Msa1207790:CDS |
| AGTAAAGTAAAGGGTGGAAG+TGG | 0.525742 | 8_1:+65547958 | Msa1207790:CDS |
| AACACGATGGGCTGTTCTTG+TGG | 0.525935 | 8_1:+65543923 | Msa1207790:CDS |
| TTCTGAGGATTCTATGGAGA+AGG | 0.527244 | 8_1:+65550008 | Msa1207790:CDS |
| ATTGACTGACCAAGAACTCC+GGG | 0.529158 | 8_1:-65548042 | None:intergenic |
| GGAGACAAGAGTAAAGTAAA+GGG | 0.531219 | 8_1:+65547949 | Msa1207790:CDS |
| TACATTGAAGCTTGTGAAAG+TGG | 0.531816 | 8_1:+65548501 | Msa1207790:CDS |
| TAAGATAAAGTAGAAACTGT+TGG | 0.533052 | 8_1:+65550288 | Msa1207790:three_prime_UTR |
| CCAAGGCAAGTGATGTACTC+TGG | 0.534621 | 8_1:-65548639 | None:intergenic |
| GTTCTTGTGGCTGGTTCAAG+TGG | 0.537142 | 8_1:+65543936 | Msa1207790:CDS |
| GACAAGAGTAAAGTAAAGGG+TGG | 0.537223 | 8_1:+65547952 | Msa1207790:CDS |
| CCGTCTCCGCAATCTTCTCA+AGG | 0.541335 | 8_1:-65549521 | None:intergenic |
| GATCCTAGTTTGTCATTGTG+AGG | 0.542298 | 8_1:-65549309 | None:intergenic |
| TAAAGTAGAAACTGTTGGGT+AGG | 0.543063 | 8_1:+65550293 | Msa1207790:three_prime_UTR |
| GATGCTGAGGTTGATGAAGT+TGG | 0.543334 | 8_1:+65543900 | Msa1207790:CDS |
| TTGCAACAGCGGTGTTTCTG+AGG | 0.547552 | 8_1:+65549993 | Msa1207790:CDS |
| CATACAAAAGATTACTAGGT+AGG | 0.548877 | 8_1:+65543527 | None:intergenic |
| TTATAGTGCTTAACTTTGTG+TGG | 0.550783 | 8_1:+65550089 | Msa1207790:exon |
| TTTGCAATTGAGAGAATGGT+TGG | 0.552160 | 8_1:+65550361 | Msa1207790:three_prime_UTR |
| CATGTATAGCAGCATGTGGT+GGG | 0.553960 | 8_1:+65550031 | Msa1207790:CDS |
| TAAGAGATTAGATCATCAAA+CGG | 0.556011 | 8_1:+65549482 | Msa1207790:CDS |
| TTGCGGAGACGGTGAAACAT+AGG | 0.557136 | 8_1:+65549532 | Msa1207790:CDS |
| TTATGTTGAACATATATTGG+AGG | 0.557765 | 8_1:-65550220 | None:intergenic |
| TTATCAACAACTGGTATGCA+TGG | 0.558787 | 8_1:-65544160 | None:intergenic |
| GCATCATCCACCACCTCACC+CGG | 0.559455 | 8_1:-65543882 | None:intergenic |
| TTAGTTGTGAAAGAGTAAGC+AGG | 0.560252 | 8_1:+65550259 | Msa1207790:three_prime_UTR |
| CAAGTGATGTACTCTGGAGG+TGG | 0.562964 | 8_1:-65548633 | None:intergenic |
| ACGTTATATCTGTTGGATTG+TGG | 0.563611 | 8_1:-65543619 | None:intergenic |
| AGTGATTAGATTGCCGGGTG+AGG | 0.566170 | 8_1:+65543869 | Msa1207790:CDS |
| AGGAACGCCGACATAAACAT+TGG | 0.566600 | 8_1:-65544288 | None:intergenic |
| ATTTATCTGCAGGATTACAC+TGG | 0.567542 | 8_1:+65547886 | Msa1207790:intron |
| GTTTGTCATTGTGAGGAGGA+AGG | 0.567849 | 8_1:-65549302 | None:intergenic |
| GACTCAGTGATTAGATTGCC+GGG | 0.570229 | 8_1:+65543864 | Msa1207790:CDS |
| GAAAGTGGTAGCATGTTTGA+GGG | 0.570395 | 8_1:+65548516 | Msa1207790:CDS |
| GGAACGCCGACATAAACATT+GGG | 0.570758 | 8_1:-65544287 | None:intergenic |
| GATTAGATTGCCGGGTGAGG+TGG | 0.571194 | 8_1:+65543872 | Msa1207790:CDS |
| TTGATGATAACTCCAGGCCT+AGG | 0.571363 | 8_1:-65544251 | None:intergenic |
| GAAAAGCTATATTTGTACCA+AGG | 0.574916 | 8_1:+65549258 | Msa1207790:CDS |
| TATGCCGTATGTATATGCTA+TGG | 0.580005 | 8_1:+65548332 | Msa1207790:CDS |
| AAATCCATAGCATATACATA+CGG | 0.584476 | 8_1:-65548336 | None:intergenic |
| TTGCAATTGAGAGAATGGTT+GGG | 0.585076 | 8_1:+65550362 | Msa1207790:three_prime_UTR |
| GCATGTATAGCAGCATGTGG+TGG | 0.587228 | 8_1:+65550030 | Msa1207790:CDS |
| AATTGACTGACCAAGAACTC+CGG | 0.593462 | 8_1:-65548043 | None:intergenic |
| TACCAGTTGTTGATAAAAGG+TGG | 0.594515 | 8_1:+65544167 | Msa1207790:CDS |
| CAAGCACAGCACAAGAAATG+TGG | 0.596178 | 8_1:+65550331 | Msa1207790:three_prime_UTR |
| GGTTGTTTGAAACTCACTGT+GGG | 0.596816 | 8_1:+65549923 | Msa1207790:CDS |
| TTGGGAATGCTTAAAATCAA+GGG | 0.601497 | 8_1:+65549665 | Msa1207790:CDS |
| TGAACGGTTCGGTCTTGCGA+CGG | 0.602064 | 8_1:-65543835 | None:intergenic |
| GTTTGAGGGTGTCATGCCAA+AGG | 0.603641 | 8_1:+65548530 | Msa1207790:CDS |
| AGTTATCATCAACCATCCAC+AGG | 0.608153 | 8_1:+65544262 | Msa1207790:CDS |
| TTTGCGAACATTTGCAACAG+CGG | 0.609184 | 8_1:+65549982 | Msa1207790:CDS |
| AAGTGCCATGCAAAACAAGA+AGG | 0.610668 | 8_1:-65543646 | None:intergenic |
| CATTCCCAATCATCAACAAG+AGG | 0.612472 | 8_1:-65549651 | None:intergenic |
| ATTGAGAGAATGGTTGGGTG+AGG | 0.617217 | 8_1:+65550367 | Msa1207790:three_prime_UTR |
| CCTAGTTTGTCATTGTGAGG+AGG | 0.618985 | 8_1:-65549306 | None:intergenic |
| CGGTTGTTTGAAACTCACTG+TGG | 0.619149 | 8_1:+65549922 | Msa1207790:CDS |
| TCACTGAGTCCCACTCTGAA+CGG | 0.619700 | 8_1:-65543851 | None:intergenic |
| GGGAACTTACTGTCCTGGAG+TGG | 0.620628 | 8_1:+65548602 | Msa1207790:CDS |
| AGAAATCCTTGAGAAGATTG+CGG | 0.621530 | 8_1:+65549515 | Msa1207790:CDS |
| AAGAAGAAACATGCATCTGG+AGG | 0.625535 | 8_1:+65548372 | Msa1207790:CDS |
| TCATCAACAAGAGGTAGACC+AGG | 0.625602 | 8_1:-65549642 | None:intergenic |
| TGAGGTGGTGGATGATGCTG+AGG | 0.625941 | 8_1:+65543887 | Msa1207790:CDS |
| CAGGGACCCAATGTTTATGT+CGG | 0.627160 | 8_1:+65544281 | Msa1207790:CDS |
| GGATGGTTGATGATAACTCC+AGG | 0.627986 | 8_1:-65544257 | None:intergenic |
| AGTAAAGGGTGGAAGTGGCA+AGG | 0.631546 | 8_1:+65547963 | Msa1207790:CDS |
| AAACATTGGGTCCCTGTGGA+TGG | 0.632954 | 8_1:-65544274 | None:intergenic |
| AGCTTGTTAAAGAATTGACT+AGG | 0.633857 | 8_1:-65543681 | None:intergenic |
| CCGTTGCAGGATCAAAACCT+TGG | 0.635618 | 8_1:-65549275 | None:intergenic |
| AATGCACAAGAGAGTAGTTG+GGG | 0.641706 | 8_1:+65548582 | Msa1207790:CDS |
| GTGGGTCACTGACACAGTAT+GGG | 0.645354 | 8_1:+65549941 | Msa1207790:CDS |
| TTGGATTGTGGAGTCAGTGA+AGG | 0.656715 | 8_1:-65543607 | None:intergenic |
| AAGACCGAACCGTTCAGAGT+GGG | 0.657927 | 8_1:+65543842 | Msa1207790:CDS |
| TGATGAAGTTGGAACACGAT+GGG | 0.660590 | 8_1:+65543911 | Msa1207790:CDS |
| GAATCATTTAGATGGTAGCG+TGG | 0.666047 | 8_1:+65549554 | Msa1207790:CDS |
| GTGAGCACCAACAACAACCA+TGG | 0.666242 | 8_1:-65543801 | None:intergenic |
| AGAGTACATCACTTGCCTTG+GGG | 0.670035 | 8_1:+65548641 | Msa1207790:CDS |
| ACATAAACATTGGGTCCCTG+TGG | 0.672744 | 8_1:-65544278 | None:intergenic |
| TTGATGAAGTTGGAACACGA+TGG | 0.686011 | 8_1:+65543910 | Msa1207790:CDS |
| AGGCAAGTGATGTACTCTGG+AGG | 0.687328 | 8_1:-65548636 | None:intergenic |
| AAGGCATGTATAGCAGCATG+TGG | 0.690392 | 8_1:+65550027 | Msa1207790:CDS |
| GTTATCATCAACCATCCACA+GGG | 0.690578 | 8_1:+65544263 | Msa1207790:CDS |
| CAACACTATACAAATCCCCA+AGG | 0.692818 | 8_1:-65548656 | None:intergenic |
| CAAGACCGAACCGTTCAGAG+TGG | 0.697678 | 8_1:+65543841 | Msa1207790:CDS |
| CTATTACATCCATCAAACAC+AGG | 0.703992 | 8_1:+65550066 | Msa1207790:CDS |
| TGGCCACAAAGATAGGACAC+CGG | 0.717808 | 8_1:-65543781 | None:intergenic |
| ATATATTACTCCGATCATGG+AGG | 0.732812 | 8_1:+65548018 | Msa1207790:CDS |
| TTGACTGACCAAGAACTCCG+GGG | 0.765346 | 8_1:-65548041 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTATAAAATTTATTTTTCAA+AGG | - | chr8_1:65546193-65546212 | None:intergenic | 10.0% |
| !! | ATATTTAATTATTAAGAGAA+GGG | - | chr8_1:65546249-65546268 | None:intergenic | 10.0% |
| !!! | CACATATTTTAAATTTATTT+TGG | + | chr8_1:65546452-65546471 | Msa1207790:intron | 10.0% |
| !!! | GTTATTTCATATTTTATAAT+AGG | + | chr8_1:65546475-65546494 | Msa1207790:intron | 10.0% |
| !! | TAGAAATAAAAAAAATATTG+AGG | + | chr8_1:65546632-65546651 | Msa1207790:intron | 10.0% |
| !! | AGAAATAAAAAAAATATTGA+GGG | + | chr8_1:65546633-65546652 | Msa1207790:intron | 10.0% |
| !!! | TATATATTTTAACATAAGAA+GGG | + | chr8_1:65546766-65546785 | Msa1207790:intron | 10.0% |
| !!! | CACATATTTTAATTTTATTT+TGG | - | chr8_1:65546858-65546877 | None:intergenic | 10.0% |
| !!! | GTAATTTACTATTATTATTT+TGG | + | chr8_1:65547417-65547436 | Msa1207790:intron | 10.0% |
| !! | AAGACAAATTAAATTAAATT+AGG | + | chr8_1:65550453-65550472 | Msa1207790:three_prime_UTR | 10.0% |
| !! | ATTCTTCAAAAAAAAAAACA+TGG | - | chr8_1:65544382-65544401 | None:intergenic | 15.0% |
| !!! | ATTTTTTGTAACATAAACAA+TGG | + | chr8_1:65544778-65544797 | Msa1207790:intron | 15.0% |
| !! | ATATTCTTAACATAAGTAAT+TGG | - | chr8_1:65545000-65545019 | None:intergenic | 15.0% |
| !! | ATTGAACTTATATTTCAATT+CGG | - | chr8_1:65545535-65545554 | None:intergenic | 15.0% |
| !!! | CTTTTTTTGAAACAAATAAA+AGG | - | chr8_1:65545604-65545623 | None:intergenic | 15.0% |
| !!! | AAATAAGTGTGTTTTTTTTA+AGG | + | chr8_1:65545656-65545675 | Msa1207790:intron | 15.0% |
| !!! | AATAAGTGTGTTTTTTTTAA+GGG | + | chr8_1:65545657-65545676 | Msa1207790:intron | 15.0% |
| !!! | TTTTCTAATGTTTTGAATAA+GGG | - | chr8_1:65545887-65545906 | None:intergenic | 15.0% |
| !!! | ATTTTCTAATGTTTTGAATA+AGG | - | chr8_1:65545888-65545907 | None:intergenic | 15.0% |
| !!! | CTTTACTCTATTTTATAATA+GGG | - | chr8_1:65546129-65546148 | None:intergenic | 15.0% |
| !!! | ACTTTACTCTATTTTATAAT+AGG | - | chr8_1:65546130-65546149 | None:intergenic | 15.0% |
| !!! | AAAATTTATTTTTCAAAGGT+GGG | - | chr8_1:65546189-65546208 | None:intergenic | 15.0% |
| !!! | TAAAATTTATTTTTCAAAGG+TGG | - | chr8_1:65546190-65546209 | None:intergenic | 15.0% |
| !! | TATTTAATTATTAAGAGAAG+GGG | - | chr8_1:65546248-65546267 | None:intergenic | 15.0% |
| !! | CATATTTAATTATTAAGAGA+AGG | - | chr8_1:65546250-65546269 | None:intergenic | 15.0% |
| !! | TTATTAAAGTCGATTAAATA+TGG | - | chr8_1:65546427-65546446 | None:intergenic | 15.0% |
| !!! | GTATATATTTTAACATAAGA+AGG | + | chr8_1:65546765-65546784 | Msa1207790:intron | 15.0% |
| !! | TTACTAAAGACAATAAAATA+CGG | + | chr8_1:65546883-65546902 | Msa1207790:intron | 15.0% |
| !!! | ATGAATTTATTTTTCTTAGA+TGG | + | chr8_1:65547003-65547022 | Msa1207790:intron | 15.0% |
| !!! | AAACAAAATAGATGTTTTTT+TGG | + | chr8_1:65547772-65547791 | Msa1207790:intron | 15.0% |
| !!! | AACAAAATAGATGTTTTTTT+GGG | + | chr8_1:65547773-65547792 | Msa1207790:intron | 15.0% |
| !! | ATATATAAATATCCTATCTT+CGG | - | chr8_1:65548004-65548023 | None:intergenic | 15.0% |
| !!! | AAAAAATGTCATTTTATGTT+TGG | + | chr8_1:65548442-65548461 | Msa1207790:intron | 15.0% |
| !! | AAATGTCAAAATTGTTATGT+GGG | - | chr8_1:65544060-65544079 | None:intergenic | 20.0% |
| !! | TAAATGTCAAAATTGTTATG+TGG | - | chr8_1:65544061-65544080 | None:intergenic | 20.0% |
| !! | TTTGTCAATTCACAAAAATA+AGG | - | chr8_1:65544452-65544471 | None:intergenic | 20.0% |
| !! | TATATCGTTTCTTAAGAAAA+AGG | - | chr8_1:65544615-65544634 | None:intergenic | 20.0% |
| !! | CGACAAAAATATAAAAATAC+TGG | + | chr8_1:65544640-65544659 | Msa1207790:intron | 20.0% |
| !! | GATATTATTTAGATTCGAAA+GGG | + | chr8_1:65544662-65544681 | Msa1207790:intron | 20.0% |
| !!! | ATTTTTGTTTAACATAGAAG+TGG | - | chr8_1:65544751-65544770 | None:intergenic | 20.0% |
| !! | ACTTCTATGTTAAACAAAAA+TGG | + | chr8_1:65544750-65544769 | Msa1207790:intron | 20.0% |
| !!! | CTTTTTGGCAATTTAATATT+TGG | - | chr8_1:65544873-65544892 | None:intergenic | 20.0% |
| !! | AACTCTATCATTTAATGTAT+GGG | - | chr8_1:65545114-65545133 | None:intergenic | 20.0% |
| !!! | ATAAGTTGATTAATATGAGA+CGG | + | chr8_1:65545279-65545298 | Msa1207790:intron | 20.0% |
| !!! | TATAAGAAGCTTTTTTTTTG+TGG | + | chr8_1:65545420-65545439 | Msa1207790:intron | 20.0% |
| !! | TTATATTTCAATTCGGAATA+GGG | - | chr8_1:65545528-65545547 | None:intergenic | 20.0% |
| !! | CTTACTAAATACTAACTATT+TGG | - | chr8_1:65545732-65545751 | None:intergenic | 20.0% |
| !! | CAAATAGTTAGTATTTAGTA+AGG | + | chr8_1:65545730-65545749 | Msa1207790:intron | 20.0% |
| !! | GGAGTATATATATTAACATA+AGG | - | chr8_1:65545858-65545877 | None:intergenic | 20.0% |
| !!! | TTTCTAATGTTTTGAATAAG+GGG | - | chr8_1:65545886-65545905 | None:intergenic | 20.0% |
| !! | GTAATTCAAAAATCTCATAA+GGG | - | chr8_1:65546222-65546241 | None:intergenic | 20.0% |
| !! | TGTAATTCAAAAATCTCATA+AGG | - | chr8_1:65546223-65546242 | None:intergenic | 20.0% |
| !! | ATTTAATTATTAAGAGAAGG+GGG | - | chr8_1:65546247-65546266 | None:intergenic | 20.0% |
| !! | GAAAAATATGTATACAAAAC+TGG | + | chr8_1:65546540-65546559 | Msa1207790:intron | 20.0% |
| !!! | TCTAATATCTTTTGAATAAG+AGG | + | chr8_1:65546734-65546753 | Msa1207790:intron | 20.0% |
| !!! | CTAATATCTTTTGAATAAGA+GGG | + | chr8_1:65546735-65546754 | Msa1207790:intron | 20.0% |
| !!! | TAATATCTTTTGAATAAGAG+GGG | + | chr8_1:65546736-65546755 | Msa1207790:intron | 20.0% |
| !!! | AATTTATTTTTCTTAGATGG+TGG | + | chr8_1:65547006-65547025 | Msa1207790:intron | 20.0% |
| !! | GTAGTGCATATTTAATTATT+AGG | + | chr8_1:65547079-65547098 | Msa1207790:intron | 20.0% |
| !!! | AAGACATAGTTTCTTTTTTT+GGG | + | chr8_1:65547211-65547230 | Msa1207790:intron | 20.0% |
| !!! | AGTGTATATTTTAACATAAG+AGG | + | chr8_1:65547353-65547372 | Msa1207790:intron | 20.0% |
| !!! | GTGTATATTTTAACATAAGA+GGG | + | chr8_1:65547354-65547373 | Msa1207790:intron | 20.0% |
| !!! | TGTATATTTTAACATAAGAG+GGG | + | chr8_1:65547355-65547374 | Msa1207790:intron | 20.0% |
| !! | TGTAATTCAAACATCTTTAA+AGG | + | chr8_1:65547385-65547404 | Msa1207790:intron | 20.0% |
| !! | GTAATTCAAACATCTTTAAA+GGG | + | chr8_1:65547386-65547405 | Msa1207790:intron | 20.0% |
| !!! | TACTATTATTATTTTGGAAC+CGG | + | chr8_1:65547423-65547442 | Msa1207790:intron | 20.0% |
| !!! | ATGGTAATATTTCATTTTTC+CGG | + | chr8_1:65548405-65548424 | Msa1207790:intron | 20.0% |
| !! | ATTACATTATTTCAAATGGT+TGG | - | chr8_1:65548710-65548729 | None:intergenic | 20.0% |
| !! | GAACATTACATTATTTCAAA+TGG | - | chr8_1:65548714-65548733 | None:intergenic | 20.0% |
| !! | ACAAATTATGCAAAGTATAT+AGG | - | chr8_1:65548751-65548770 | None:intergenic | 20.0% |
| !! | TTTGTTAGTAATTAGTACTT+AGG | - | chr8_1:65548846-65548865 | None:intergenic | 20.0% |
| !! | CTAATTACTAACAAATTTGT+AGG | + | chr8_1:65548851-65548870 | Msa1207790:intron | 20.0% |
| !! | AACTCAAAAAGTTTGTAATT+TGG | - | chr8_1:65548878-65548897 | None:intergenic | 20.0% |
| !!! | CTATTTGGAGATTTTTAAAT+AGG | - | chr8_1:65548906-65548925 | None:intergenic | 20.0% |
| !!! | TTATGTTTTAATTTTTGTGC+AGG | + | chr8_1:65549155-65549174 | Msa1207790:intron | 20.0% |
| !!! | ATTTGGTTGATAATAAGTTA+AGG | - | chr8_1:65549403-65549422 | None:intergenic | 20.0% |
| !! | TTGATAAAATATAATCAGTG+TGG | + | chr8_1:65549797-65549816 | Msa1207790:intron | 20.0% |
| !! | CTTATTAGTATAACATACAA+TGG | + | chr8_1:65549862-65549881 | Msa1207790:intron | 20.0% |
| !! | ACATTATGTTGAACATATAT+TGG | - | chr8_1:65550226-65550245 | None:intergenic | 20.0% |
| !!! | GATGATTGTTTTAGTATTTT+TGG | + | chr8_1:65550389-65550408 | Msa1207790:three_prime_UTR | 20.0% |
| ! | TAACGAAAAAACGAAAACAA+AGG | - | chr8_1:65543734-65543753 | None:intergenic | 25.0% |
| !!! | TTGTTTTCGTTTTTTCGTTA+TGG | + | chr8_1:65543734-65543753 | Msa1207790:CDS | 25.0% |
| !!! | TGTGTTATGTTTTAATGAGT+TGG | + | chr8_1:65544114-65544133 | Msa1207790:intron | 25.0% |
| ! | GGATATTATTTAGATTCGAA+AGG | + | chr8_1:65544661-65544680 | Msa1207790:intron | 25.0% |
| !!! | AAGTTTTGAGAGAAAGAAAA+AGG | + | chr8_1:65544686-65544705 | Msa1207790:intron | 25.0% |
| ! | TCAATTAATACAACTACTAG+TGG | + | chr8_1:65544807-65544826 | Msa1207790:intron | 25.0% |
| ! | TTTGGCAATTTAATATTTGG+TGG | - | chr8_1:65544870-65544889 | None:intergenic | 25.0% |
| ! | TTGGAATTAATTAGAGGAAT+TGG | + | chr8_1:65545051-65545070 | Msa1207790:intron | 25.0% |
| ! | CAACTCTATCATTTAATGTA+TGG | - | chr8_1:65545115-65545134 | None:intergenic | 25.0% |
| !!! | AGAAGCTTTTTTTTTTGTAG+TGG | + | chr8_1:65545340-65545359 | Msa1207790:intron | 25.0% |
| ! | TACAATGCATAATATATGCA+AGG | - | chr8_1:65545468-65545487 | None:intergenic | 25.0% |
| ! | CTTATATTTCAATTCGGAAT+AGG | - | chr8_1:65545529-65545548 | None:intergenic | 25.0% |
| ! | GTGAAAACAAAATTAATGTG+GGG | - | chr8_1:65545710-65545729 | None:intergenic | 25.0% |
| ! | GGTGAAAACAAAATTAATGT+GGG | - | chr8_1:65545711-65545730 | None:intergenic | 25.0% |
| ! | TGGTGAAAACAAAATTAATG+TGG | - | chr8_1:65545712-65545731 | None:intergenic | 25.0% |
| !!! | TTCTAATGTTTTGAATAAGG+GGG | - | chr8_1:65545885-65545904 | None:intergenic | 25.0% |
| !! | TGTAATTCAAGTTTCTCTTA+GGG | - | chr8_1:65545925-65545944 | None:intergenic | 25.0% |
| !! | ATGTAATTCAAGTTTCTCTT+AGG | - | chr8_1:65545926-65545945 | None:intergenic | 25.0% |
| !!! | TGTAGATTTTAACATAAGAG+GGG | - | chr8_1:65545955-65545974 | None:intergenic | 25.0% |
| !!! | GTGTAGATTTTAACATAAGA+GGG | - | chr8_1:65546662-65546681 | None:intergenic | 25.0% |
| !!! | AGTGTAGATTTTAACATAAG+AGG | - | chr8_1:65546661-65546680 | None:intergenic | 25.0% |
| ! | CCAAATAAAAATAGCATTGT+AGG | - | chr8_1:65546582-65546601 | None:intergenic | 25.0% |
| !!! | CCTACAATGCTATTTTTATT+TGG | + | chr8_1:65546579-65546598 | Msa1207790:intron | 25.0% |
| !!! | ATATTTTAACATAAGAAGGG+AGG | + | chr8_1:65546769-65546788 | Msa1207790:intron | 25.0% |
| !! | AAAAGTAGCAATTTTTGCAT+TGG | + | chr8_1:65547143-65547162 | Msa1207790:intron | 25.0% |
| !!! | CAAGACATAGTTTCTTTTTT+TGG | + | chr8_1:65547210-65547229 | Msa1207790:intron | 25.0% |
| !!! | ACTATTATTATTTTGGAACC+GGG | + | chr8_1:65547424-65547443 | Msa1207790:intron | 25.0% |
| !!! | TTCGATTTGATAACGTAAAT+TGG | + | chr8_1:65547691-65547710 | Msa1207790:intron | 25.0% |
| ! | TTTATATATTACTCCGATCA+TGG | + | chr8_1:65548015-65548034 | Msa1207790:CDS | 25.0% |
| ! | TCATATGATCAACGTATATT+TGG | - | chr8_1:65548172-65548191 | None:intergenic | 25.0% |
| ! | AAATCCATAGCATATACATA+CGG | - | chr8_1:65548339-65548358 | None:intergenic | 25.0% |
| !! | TTTTTACAAGCATCATTTAC+CGG | - | chr8_1:65548427-65548446 | None:intergenic | 25.0% |
| ! | ACATAAACATTAAGATCCTT+TGG | - | chr8_1:65548549-65548568 | None:intergenic | 25.0% |
| ! | TAATTTGGTCCTTGAATTTA+GGG | - | chr8_1:65548782-65548801 | None:intergenic | 25.0% |
| ! | AATTACAACAACTATGCATT+AGG | + | chr8_1:65549195-65549214 | Msa1207790:CDS | 25.0% |
| !! | TTGATAATAAGTTAAGGTTG+AGG | - | chr8_1:65549397-65549416 | None:intergenic | 25.0% |
| ! | ATCTAATCTCTTATACTGAA+AGG | - | chr8_1:65549475-65549494 | None:intergenic | 25.0% |
| ! | TAAGAGATTAGATCATCAAA+CGG | + | chr8_1:65549482-65549501 | Msa1207790:CDS | 25.0% |
| ! | AAACATAGGAATCATTTAGA+TGG | + | chr8_1:65549546-65549565 | Msa1207790:CDS | 25.0% |
| ! | TTATGTTGAACATATATTGG+AGG | - | chr8_1:65550223-65550242 | None:intergenic | 25.0% |
| ! | AACAGTTTCTACTTTATCTT+AGG | - | chr8_1:65550289-65550308 | None:intergenic | 25.0% |
| ! | TAAGATAAAGTAGAAACTGT+TGG | + | chr8_1:65550288-65550307 | Msa1207790:three_prime_UTR | 25.0% |
| ! | AAGATAAAGTAGAAACTGTT+GGG | + | chr8_1:65550289-65550308 | Msa1207790:three_prime_UTR | 25.0% |
| !! | AGCTTGTTAAAGAATTGACT+AGG | - | chr8_1:65543684-65543703 | None:intergenic | 30.0% |
| AACAAAGGCTCATAAAAACA+GGG | - | chr8_1:65543719-65543738 | None:intergenic | 30.0% | |
| AAACAAAGGCTCATAAAAAC+AGG | - | chr8_1:65543720-65543739 | None:intergenic | 30.0% | |
| !!! | TTTTCGTTTTTTCGTTATGG+CGG | + | chr8_1:65543737-65543756 | Msa1207790:CDS | 30.0% |
| !!! | AATGAGTTGGTTTTGATTAC+AGG | + | chr8_1:65544127-65544146 | Msa1207790:intron | 30.0% |
| !! | GAATTTTCTAGCCAAATTGA+TGG | + | chr8_1:65544398-65544417 | Msa1207790:intron | 30.0% |
| GAGCTAGAAAAACTGTAAAA+AGG | - | chr8_1:65544550-65544569 | None:intergenic | 30.0% | |
| GAAAAAGGATTAGAAAAAGC+TGG | - | chr8_1:65544600-65544619 | None:intergenic | 30.0% | |
| !! | TTTTGAGAGAAAGAAAAAGG+TGG | + | chr8_1:65544689-65544708 | Msa1207790:intron | 30.0% |
| AAATCTCACATAATCCTCTA+AGG | - | chr8_1:65544722-65544741 | None:intergenic | 30.0% | |
| ! | AGGATTATGTGAGATTTGTT+TGG | + | chr8_1:65544725-65544744 | Msa1207790:intron | 30.0% |
| ! | CATTCAAATGCGTTTCTTTT+TGG | - | chr8_1:65544888-65544907 | None:intergenic | 30.0% |
| CAAAAAGAAACGCATTTGAA+TGG | + | chr8_1:65544886-65544905 | Msa1207790:intron | 30.0% | |
| ! | ATTCTTCACTTAGTCTTTGA+TGG | + | chr8_1:65544911-65544930 | Msa1207790:intron | 30.0% |
| GCATTTGAGCATTTAATTAG+TGG | + | chr8_1:65544939-65544958 | Msa1207790:intron | 30.0% | |
| ! | TTAAGAATATTTTGTCCCTC+TGG | + | chr8_1:65545010-65545029 | Msa1207790:intron | 30.0% |
| !! | AATTATGATGGATACAGCAA+GGG | - | chr8_1:65545079-65545098 | None:intergenic | 30.0% |
| CTATCATTTAATGTATGGGA+CGG | - | chr8_1:65545110-65545129 | None:intergenic | 30.0% | |
| !!! | TTTTTTTTTTGTAGTGGCTG+AGG | + | chr8_1:65545346-65545365 | Msa1207790:intron | 30.0% |
| !!! | AAGAAGCTTTTTTTTTGTGG+TGG | + | chr8_1:65545423-65545442 | Msa1207790:intron | 30.0% |
| ! | TTCAAGTATCTTTGAGGAAA+GGG | - | chr8_1:65545828-65545847 | None:intergenic | 30.0% |
| ! | ATTCAAGTATCTTTGAGGAA+AGG | - | chr8_1:65545829-65545848 | None:intergenic | 30.0% |
| GTCTAATTCAAGTATCTTTG+AGG | - | chr8_1:65545834-65545853 | None:intergenic | 30.0% | |
| !! | TCTAATGTTTTGAATAAGGG+GGG | - | chr8_1:65545884-65545903 | None:intergenic | 30.0% |
| ! | GTAATTCAAGTTTCTCTTAG+GGG | - | chr8_1:65545924-65545943 | None:intergenic | 30.0% |
| !! | GTAGATTTTAACATAAGAGG+GGG | - | chr8_1:65545954-65545973 | None:intergenic | 30.0% |
| TTCAAAAATCTCATAAGGGA+GGG | - | chr8_1:65546218-65546237 | None:intergenic | 30.0% | |
| ATTCAAAAATCTCATAAGGG+AGG | - | chr8_1:65546219-65546238 | None:intergenic | 30.0% | |
| !! | AGATTTTAACATAAGACGAG+AGG | + | chr8_1:65546666-65546685 | Msa1207790:intron | 30.0% |
| !! | GATTTTAACATAAGACGAGA+GGG | + | chr8_1:65546667-65546686 | Msa1207790:intron | 30.0% |
| !! | ATTTTAACATAAGACGAGAG+GGG | + | chr8_1:65546668-65546687 | Msa1207790:intron | 30.0% |
| TGTAATTCAAGCATCTTTGA+AGG | + | chr8_1:65546796-65546815 | Msa1207790:intron | 30.0% | |
| GTAATTCAAGCATCTTTGAA+GGG | + | chr8_1:65546797-65546816 | Msa1207790:intron | 30.0% | |
| TTCCTTAAACAATGTCCTTA+GGG | + | chr8_1:65547234-65547253 | Msa1207790:intron | 30.0% | |
| TAGCAAGACCCTAATTATTA+AGG | + | chr8_1:65547264-65547283 | Msa1207790:intron | 30.0% | |
| AGCAAGACCCTAATTATTAA+GGG | + | chr8_1:65547265-65547284 | Msa1207790:intron | 30.0% | |
| ACTCTCTCCCTTAATAATTA+GGG | - | chr8_1:65547275-65547294 | None:intergenic | 30.0% | |
| AACTCTCTCCCTTAATAATT+AGG | - | chr8_1:65547276-65547295 | None:intergenic | 30.0% | |
| TTGTAATCCATGCATCTTAT+AGG | + | chr8_1:65547294-65547313 | Msa1207790:intron | 30.0% | |
| !!! | CTATTATTATTTTGGAACCG+GGG | + | chr8_1:65547425-65547444 | Msa1207790:intron | 30.0% |
| !!! | TATTATTATTTTGGAACCGG+GGG | + | chr8_1:65547426-65547445 | Msa1207790:intron | 30.0% |
| AGTTTCTTGCACATAGATTA+AGG | - | chr8_1:65547591-65547610 | None:intergenic | 30.0% | |
| TTGTTCAAAAGTCTTTAGTG+AGG | + | chr8_1:65547735-65547754 | Msa1207790:intron | 30.0% | |
| CTTATTCTCTATTTATCTGC+AGG | + | chr8_1:65547876-65547895 | Msa1207790:intron | 30.0% | |
| CATAACTAATCCTTTGAGTA+GGG | + | chr8_1:65548104-65548123 | Msa1207790:intron | 30.0% | |
| ACATCAAAAAGAGAATCACT+TGG | - | chr8_1:65548300-65548319 | None:intergenic | 30.0% | |
| ! | AGTGATTCTCTTTTTGATGT+AGG | + | chr8_1:65548300-65548319 | Msa1207790:intron | 30.0% |
| ! | GTGATTCTCTTTTTGATGTA+GGG | + | chr8_1:65548301-65548320 | Msa1207790:intron | 30.0% |
| GTAATTTGGTCCTTGAATTT+AGG | - | chr8_1:65548783-65548802 | None:intergenic | 30.0% | |
| ! | GCTTTCACTTGTTAATTACT+CGG | - | chr8_1:65548941-65548960 | None:intergenic | 30.0% |
| ACACAATCTAAAAAGGGAAA+CGG | + | chr8_1:65549029-65549048 | Msa1207790:CDS | 30.0% | |
| GGTGAAACAACAATACAAAT+CGG | + | chr8_1:65549050-65549069 | Msa1207790:CDS | 30.0% | |
| AACAACAATACAAATCGGTA+AGG | + | chr8_1:65549055-65549074 | Msa1207790:intron | 30.0% | |
| ! | TTTTTGTGCAGGTTAAAGAA+CGG | + | chr8_1:65549166-65549185 | Msa1207790:intron | 30.0% |
| ! | TAGCTTTTCATCTGTAATGT+TGG | - | chr8_1:65549247-65549266 | None:intergenic | 30.0% |
| GAAAAGCTATATTTGTACCA+AGG | + | chr8_1:65549258-65549277 | Msa1207790:CDS | 30.0% | |
| TGACAAACTAGGATCTAAAA+TGG | + | chr8_1:65549317-65549336 | Msa1207790:CDS | 30.0% | |
| ATAAAATCTCTGCATCTCTT+TGG | - | chr8_1:65549353-65549372 | None:intergenic | 30.0% | |
| ! | ATGCAGAGATTTTATTCATG+TGG | + | chr8_1:65549358-65549377 | Msa1207790:CDS | 30.0% |
| ! | TGCAGAGATTTTATTCATGT+GGG | + | chr8_1:65549359-65549378 | Msa1207790:CDS | 30.0% |
| ! | GATTTTATTCATGTGGGAAA+TGG | + | chr8_1:65549365-65549384 | Msa1207790:CDS | 30.0% |
| CAATCATTTGAACAAGGATT+TGG | - | chr8_1:65549420-65549439 | None:intergenic | 30.0% | |
| ! | TTGATTGGAGTTTTACTGTT+TGG | + | chr8_1:65549579-65549598 | Msa1207790:CDS | 30.0% |
| ATTGGGAATGCTTAAAATCA+AGG | + | chr8_1:65549664-65549683 | Msa1207790:CDS | 30.0% | |
| TTGGGAATGCTTAAAATCAA+GGG | + | chr8_1:65549665-65549684 | Msa1207790:CDS | 30.0% | |
| TAAGTTATGAAGACAGATGT+CGG | - | chr8_1:65549846-65549865 | None:intergenic | 30.0% | |
| TTATAGTGCTTAACTTTGTG+TGG | + | chr8_1:65550089-65550108 | Msa1207790:exon | 30.0% | |
| ! | GTAATTTGCAATTGAGAGAA+TGG | + | chr8_1:65550357-65550376 | Msa1207790:three_prime_UTR | 30.0% |
| ACGTTATATCTGTTGGATTG+TGG | - | chr8_1:65543622-65543641 | None:intergenic | 35.0% | |
| ACAAAGGCTCATAAAAACAG+GGG | - | chr8_1:65543718-65543737 | None:intergenic | 35.0% | |
| ! | CGTAGCAAAAACATGTTTTC+CGG | + | chr8_1:65543762-65543781 | Msa1207790:CDS | 35.0% |
| AGAAACTGATTGAACTCACT+TGG | - | chr8_1:65543980-65543999 | None:intergenic | 35.0% | |
| TTATCAACAACTGGTATGCA+TGG | - | chr8_1:65544163-65544182 | None:intergenic | 35.0% | |
| ! | GCATACCAGTTGTTGATAAA+AGG | + | chr8_1:65544164-65544183 | Msa1207790:CDS | 35.0% |
| ! | TACCAGTTGTTGATAAAAGG+TGG | + | chr8_1:65544167-65544186 | Msa1207790:CDS | 35.0% |
| ACAGAAAACGTAAGTACCTT+AGG | - | chr8_1:65544311-65544330 | None:intergenic | 35.0% | |
| !! | AAGGTACTTACGTTTTCTGT+TGG | + | chr8_1:65544311-65544330 | Msa1207790:intron | 35.0% |
| TGTAATGTCGACCATCAATT+TGG | - | chr8_1:65544412-65544431 | None:intergenic | 35.0% | |
| !!! | TTACAGTTTTTCTAGCTCTC+TGG | + | chr8_1:65544552-65544571 | Msa1207790:intron | 35.0% |
| !! | CAATTATGATGGATACAGCA+AGG | - | chr8_1:65545080-65545099 | None:intergenic | 35.0% |
| TGCATAATATATGCAAGGTC+CGG | - | chr8_1:65545463-65545482 | None:intergenic | 35.0% | |
| !! | ATTTTAACATAAGAGGGGGA+GGG | - | chr8_1:65545950-65545969 | None:intergenic | 35.0% |
| TCAAAAATCTCATAAGGGAG+GGG | - | chr8_1:65546217-65546236 | None:intergenic | 35.0% | |
| ATTCAAGCTTCTTTCAAGAG+AGG | + | chr8_1:65546697-65546716 | Msa1207790:intron | 35.0% | |
| TTCAAGCTTCTTTCAAGAGA+GGG | + | chr8_1:65546698-65546717 | Msa1207790:intron | 35.0% | |
| ! | TATCTTTTGAATAAGAGGGG+AGG | + | chr8_1:65546739-65546758 | Msa1207790:intron | 35.0% |
| ! | ATCTTTTGAATAAGAGGGGA+GGG | + | chr8_1:65546740-65546759 | Msa1207790:intron | 35.0% |
| ATGCTTAAACAATGCCCTTA+GGG | - | chr8_1:65547121-65547140 | None:intergenic | 35.0% | |
| GTTCCTTAAACAATGTCCTT+AGG | + | chr8_1:65547233-65547252 | Msa1207790:intron | 35.0% | |
| !!! | TTTTTTGGGTACAACAGTGA+AGG | + | chr8_1:65547787-65547806 | Msa1207790:intron | 35.0% |
| ATTTATCTGCAGGATTACAC+TGG | + | chr8_1:65547886-65547905 | Msa1207790:intron | 35.0% | |
| TGGAGACAAGAGTAAAGTAA+AGG | + | chr8_1:65547948-65547967 | Msa1207790:CDS | 35.0% | |
| GGAGACAAGAGTAAAGTAAA+GGG | + | chr8_1:65547949-65547968 | Msa1207790:CDS | 35.0% | |
| ATATATTACTCCGATCATGG+AGG | + | chr8_1:65548018-65548037 | Msa1207790:CDS | 35.0% | |
| GCATAACTAATCCTTTGAGT+AGG | + | chr8_1:65548103-65548122 | Msa1207790:intron | 35.0% | |
| TGTAATTCTACCCTACTCAA+AGG | - | chr8_1:65548117-65548136 | None:intergenic | 35.0% | |
| GCATATACATACGGCATATT+TGG | - | chr8_1:65548330-65548349 | None:intergenic | 35.0% | |
| TATGCCGTATGTATATGCTA+TGG | + | chr8_1:65548332-65548351 | Msa1207790:CDS | 35.0% | |
| TTGAAGAAGAAACATGCATC+TGG | + | chr8_1:65548369-65548388 | Msa1207790:CDS | 35.0% | |
| ATCTGGAGGTTACAAAAAGA+TGG | + | chr8_1:65548386-65548405 | Msa1207790:CDS | 35.0% | |
| ! | GTGTGATTTTGTGCTTGTAT+AGG | + | chr8_1:65548473-65548492 | Msa1207790:intron | 35.0% |
| TACATTGAAGCTTGTGAAAG+TGG | + | chr8_1:65548501-65548520 | Msa1207790:CDS | 35.0% | |
| !! | TTTGTATAGTGTTGCTTGGA+TGG | + | chr8_1:65548665-65548684 | Msa1207790:CDS | 35.0% |
| TGTTTGCATCCCTAAATTCA+AGG | + | chr8_1:65548770-65548789 | Msa1207790:intron | 35.0% | |
| ! | TCACTTGTTAATTACTCGGT+AGG | - | chr8_1:65548937-65548956 | None:intergenic | 35.0% |
| ! | CAAGTCGATTGATCATGTTT+TGG | + | chr8_1:65548960-65548979 | Msa1207790:intron | 35.0% |
| CGAGTCACACAATCTAAAAA+GGG | + | chr8_1:65549023-65549042 | Msa1207790:CDS | 35.0% | |
| AGTATCCCTATTAGCATTTC+AGG | + | chr8_1:65549105-65549124 | Msa1207790:intron | 35.0% | |
| CTTCTCCTGAAATGCTAATA+GGG | - | chr8_1:65549113-65549132 | None:intergenic | 35.0% | |
| TCTTCTCCTGAAATGCTAAT+AGG | - | chr8_1:65549114-65549133 | None:intergenic | 35.0% | |
| ACTGCACAATCATTTGAACA+AGG | - | chr8_1:65549426-65549445 | None:intergenic | 35.0% | |
| AGAAATCCTTGAGAAGATTG+CGG | + | chr8_1:65549515-65549534 | Msa1207790:CDS | 35.0% | |
| TTACTGTTTGGTCCAACAAA+AGG | + | chr8_1:65549591-65549610 | Msa1207790:CDS | 35.0% | |
| ! | AGAACTGAAGAACCTTTTGT+TGG | - | chr8_1:65549606-65549625 | None:intergenic | 35.0% |
| AAAAGGTTCTTCAGTTCTAC+AGG | + | chr8_1:65549608-65549627 | Msa1207790:CDS | 35.0% | |
| !! | TCTACCTCTTGTTGATGATT+GGG | + | chr8_1:65549647-65549666 | Msa1207790:CDS | 35.0% |
| TACGTTATCGATGTTCGATT+TGG | + | chr8_1:65549888-65549907 | Msa1207790:intron | 35.0% | |
| !!! | GATGTTCGATTTGGTTTTGT+AGG | + | chr8_1:65549897-65549916 | Msa1207790:intron | 35.0% |
| !!! | TCGATTTGGTTTTGTAGGTT+CGG | + | chr8_1:65549902-65549921 | Msa1207790:intron | 35.0% |
| CTATTACATCCATCAAACAC+AGG | + | chr8_1:65550066-65550085 | Msa1207790:CDS | 35.0% | |
| ACTTTGTGTGGTACACTATA+TGG | + | chr8_1:65550101-65550120 | Msa1207790:exon | 35.0% | |
| TTAGTTGTGAAAGAGTAAGC+AGG | + | chr8_1:65550259-65550278 | Msa1207790:three_prime_UTR | 35.0% | |
| TAAAGTAGAAACTGTTGGGT+AGG | + | chr8_1:65550293-65550312 | Msa1207790:three_prime_UTR | 35.0% | |
| TTTGCAATTGAGAGAATGGT+TGG | + | chr8_1:65550361-65550380 | Msa1207790:three_prime_UTR | 35.0% | |
| TTGCAATTGAGAGAATGGTT+GGG | + | chr8_1:65550362-65550381 | Msa1207790:three_prime_UTR | 35.0% | |
| AGGTGACACGTTATATCTGT+TGG | - | chr8_1:65543629-65543648 | None:intergenic | 40.0% | |
| !!! | TGTCACCTTCTTGTTTTGCA+TGG | + | chr8_1:65543641-65543660 | Msa1207790:five_prime_UTR | 40.0% |
| AAGTGCCATGCAAAACAAGA+AGG | - | chr8_1:65543649-65543668 | None:intergenic | 40.0% | |
| ! | TTGTTGGTGCTCACTTTGAA+CGG | + | chr8_1:65543810-65543829 | Msa1207790:CDS | 40.0% |
| TTGATGAAGTTGGAACACGA+TGG | + | chr8_1:65543910-65543929 | Msa1207790:CDS | 40.0% | |
| TGATGAAGTTGGAACACGAT+GGG | + | chr8_1:65543911-65543930 | Msa1207790:CDS | 40.0% | |
| ! | CTCCACCTTTTATCAACAAC+TGG | - | chr8_1:65544172-65544191 | None:intergenic | 40.0% |
| ! | CTAACAACGAGTTGAATCCT+AGG | + | chr8_1:65544234-65544253 | Msa1207790:CDS | 40.0% |
| AGTTATCATCAACCATCCAC+AGG | + | chr8_1:65544262-65544281 | Msa1207790:CDS | 40.0% | |
| GTTATCATCAACCATCCACA+GGG | + | chr8_1:65544263-65544282 | Msa1207790:CDS | 40.0% | |
| GATGGTCGACATTACAAGTA+TGG | + | chr8_1:65544416-65544435 | Msa1207790:intron | 40.0% | |
| !! | TCACATAATCCTCTAAGGCA+CGG | - | chr8_1:65544717-65544736 | None:intergenic | 40.0% |
| ! | CTGGCGTTGGAATTAATTAG+AGG | + | chr8_1:65545045-65545064 | Msa1207790:intron | 40.0% |
| ACGGAAGGAGTCAATTATGA+TGG | - | chr8_1:65545091-65545110 | None:intergenic | 40.0% | |
| CATTTAATGTATGGGACGGA+AGG | - | chr8_1:65545106-65545125 | None:intergenic | 40.0% | |
| CATAATATATGCAAGGTCCG+GGG | - | chr8_1:65545461-65545480 | None:intergenic | 40.0% | |
| GCATAATATATGCAAGGTCC+GGG | - | chr8_1:65545462-65545481 | None:intergenic | 40.0% | |
| TTAAGCTTAGCTCAGTTGGT+AGG | - | chr8_1:65545491-65545510 | None:intergenic | 40.0% | |
| GACTTTAAGCTTAGCTCAGT+TGG | - | chr8_1:65545495-65545514 | None:intergenic | 40.0% | |
| !! | ATGTTTTGAATAAGGGGGGA+GGG | - | chr8_1:65545880-65545899 | None:intergenic | 40.0% |
| !! | AATGTTTTGAATAAGGGGGG+AGG | - | chr8_1:65545881-65545900 | None:intergenic | 40.0% |
| ! | TTCAAGTTTCTCTTAGGGGA+GGG | - | chr8_1:65545920-65545939 | None:intergenic | 40.0% |
| ! | ATTCAAGTTTCTCTTAGGGG+AGG | - | chr8_1:65545921-65545940 | None:intergenic | 40.0% |
| ! | TTTTAACATAAGAGGGGGAG+GGG | - | chr8_1:65545949-65545968 | None:intergenic | 40.0% |
| !! | GATTTTAACATAAGAGGGGG+AGG | - | chr8_1:65545951-65545970 | None:intergenic | 40.0% |
| ! | ATTCAAGCATCTTTGAAGGG+AGG | + | chr8_1:65546800-65546819 | Msa1207790:intron | 40.0% |
| AAATGCTAACAAGTGCCCTA+AGG | + | chr8_1:65547103-65547122 | Msa1207790:intron | 40.0% | |
| AATGCTAACAAGTGCCCTAA+GGG | + | chr8_1:65547104-65547123 | Msa1207790:intron | 40.0% | |
| GATGCTTAAACAATGCCCTT+AGG | - | chr8_1:65547122-65547141 | None:intergenic | 40.0% | |
| TGCCCTAAGGACATTGTTTA+AGG | - | chr8_1:65547239-65547258 | None:intergenic | 40.0% | |
| CTTCTCTCCTATAAGATGCA+TGG | - | chr8_1:65547304-65547323 | None:intergenic | 40.0% | |
| AAAGATCAAATGTACTCCCC+CGG | - | chr8_1:65547445-65547464 | None:intergenic | 40.0% | |
| ! | GAGAGAGCACATTTGATCTT+TGG | + | chr8_1:65547634-65547653 | Msa1207790:intron | 40.0% |
| TGGTCTCATGAAGCAATGAT+TGG | + | chr8_1:65547711-65547730 | Msa1207790:intron | 40.0% | |
| GGTCTCATGAAGCAATGATT+GGG | + | chr8_1:65547712-65547731 | Msa1207790:intron | 40.0% | |
| AACCTATACGCTGTCATTCT+TGG | + | chr8_1:65547928-65547947 | Msa1207790:CDS | 40.0% | |
| GACAAGAGTAAAGTAAAGGG+TGG | + | chr8_1:65547952-65547971 | Msa1207790:CDS | 40.0% | |
| AGTAAAGTAAAGGGTGGAAG+TGG | + | chr8_1:65547958-65547977 | Msa1207790:CDS | 40.0% | |
| TCAACAGCAAATCCGAAGAT+AGG | + | chr8_1:65547989-65548008 | Msa1207790:CDS | 40.0% | |
| AATTGACTGACCAAGAACTC+CGG | - | chr8_1:65548046-65548065 | None:intergenic | 40.0% | |
| ! | TGGAACTTTTTACGTGCAAG+AGG | - | chr8_1:65548152-65548171 | None:intergenic | 40.0% |
| AGTTCGATCAAACGAGAACT+AGG | + | chr8_1:65548250-65548269 | Msa1207790:intron | 40.0% | |
| ACGAGAACTAGGTTTATCCT+TGG | + | chr8_1:65548261-65548280 | Msa1207790:intron | 40.0% | |
| CGAGAACTAGGTTTATCCTT+GGG | + | chr8_1:65548262-65548281 | Msa1207790:intron | 40.0% | |
| AAGAAGAAACATGCATCTGG+AGG | + | chr8_1:65548372-65548391 | Msa1207790:CDS | 40.0% | |
| TGAAAGTGGTAGCATGTTTG+AGG | + | chr8_1:65548515-65548534 | Msa1207790:CDS | 40.0% | |
| GAAAGTGGTAGCATGTTTGA+GGG | + | chr8_1:65548516-65548535 | Msa1207790:CDS | 40.0% | |
| CAATGCACAAGAGAGTAGTT+GGG | + | chr8_1:65548581-65548600 | Msa1207790:CDS | 40.0% | |
| AATGCACAAGAGAGTAGTTG+GGG | + | chr8_1:65548582-65548601 | Msa1207790:CDS | 40.0% | |
| CAACACTATACAAATCCCCA+AGG | - | chr8_1:65548659-65548678 | None:intergenic | 40.0% | |
| ! | GGGATTTGTATAGTGTTGCT+TGG | + | chr8_1:65548661-65548680 | Msa1207790:CDS | 40.0% |
| CTCGCTGCATAATACAAAAC+AGG | - | chr8_1:65549007-65549026 | None:intergenic | 40.0% | |
| GCGAGTCACACAATCTAAAA+AGG | + | chr8_1:65549022-65549041 | Msa1207790:intron | 40.0% | |
| GGTTCTCATGTGATGCAATA+TGG | + | chr8_1:65549216-65549235 | Msa1207790:CDS | 40.0% | |
| ! | GATCCTAGTTTGTCATTGTG+AGG | - | chr8_1:65549312-65549331 | None:intergenic | 40.0% |
| ! | GAATCATTTAGATGGTAGCG+TGG | + | chr8_1:65549554-65549573 | Msa1207790:CDS | 40.0% |
| !! | GTCTACCTCTTGTTGATGAT+TGG | + | chr8_1:65549646-65549665 | Msa1207790:CDS | 40.0% |
| CATTCCCAATCATCAACAAG+AGG | - | chr8_1:65549654-65549673 | None:intergenic | 40.0% | |
| ! | GGTTGTTTGAAACTCACTGT+GGG | + | chr8_1:65549923-65549942 | Msa1207790:CDS | 40.0% |
| TTTGCGAACATTTGCAACAG+CGG | + | chr8_1:65549982-65550001 | Msa1207790:CDS | 40.0% | |
| ! | TTCTGAGGATTCTATGGAGA+AGG | + | chr8_1:65550008-65550027 | Msa1207790:CDS | 40.0% |
| GCACTATAACCTGTGTTTGA+TGG | - | chr8_1:65550078-65550097 | None:intergenic | 40.0% | |
| CTCGTCAATTGTGAAATTGC+TGG | + | chr8_1:65550157-65550176 | Msa1207790:three_prime_UTR | 40.0% | |
| ! | ACATATATTGGAGGCGCATA+GGG | - | chr8_1:65550214-65550233 | None:intergenic | 40.0% |
| ! | AACATATATTGGAGGCGCAT+AGG | - | chr8_1:65550215-65550234 | None:intergenic | 40.0% |
| TTGGATTGTGGAGTCAGTGA+AGG | - | chr8_1:65543610-65543629 | None:intergenic | 45.0% | |
| AGGCTCATAAAAACAGGGGA+AGG | - | chr8_1:65543714-65543733 | None:intergenic | 45.0% | |
| TTTCCGGTGTCCTATCTTTG+TGG | + | chr8_1:65543778-65543797 | Msa1207790:CDS | 45.0% | |
| ACAACCATGGCCACAAAGAT+AGG | - | chr8_1:65543791-65543810 | None:intergenic | 45.0% | |
| TTTGTGGCCATGGTTGTTGT+TGG | + | chr8_1:65543794-65543813 | Msa1207790:CDS | 45.0% | |
| GGACTCAGTGATTAGATTGC+CGG | + | chr8_1:65543863-65543882 | Msa1207790:CDS | 45.0% | |
| GACTCAGTGATTAGATTGCC+GGG | + | chr8_1:65543864-65543883 | Msa1207790:CDS | 45.0% | |
| !! | GATGCTGAGGTTGATGAAGT+TGG | + | chr8_1:65543900-65543919 | Msa1207790:CDS | 45.0% |
| ! | TTGATGATAACTCCAGGCCT+AGG | - | chr8_1:65544254-65544273 | None:intergenic | 45.0% |
| !! | GGATGGTTGATGATAACTCC+AGG | - | chr8_1:65544260-65544279 | None:intergenic | 45.0% |
| ACATAAACATTGGGTCCCTG+TGG | - | chr8_1:65544281-65544300 | None:intergenic | 45.0% | |
| CAGGGACCCAATGTTTATGT+CGG | + | chr8_1:65544281-65544300 | Msa1207790:CDS | 45.0% | |
| GGAACGCCGACATAAACATT+GGG | - | chr8_1:65544290-65544309 | None:intergenic | 45.0% | |
| AGGAACGCCGACATAAACAT+TGG | - | chr8_1:65544291-65544310 | None:intergenic | 45.0% | |
| TGTTTATGTCGGCGTTCCTA+AGG | + | chr8_1:65544292-65544311 | Msa1207790:CDS | 45.0% | |
| ATTCAACTCCGTCTCATCCA+GGG | - | chr8_1:65545378-65545397 | None:intergenic | 45.0% | |
| TATTCAACTCCGTCTCATCC+AGG | - | chr8_1:65545379-65545398 | None:intergenic | 45.0% | |
| !!! | CTTTTTTTTTGTGGTGGCCG+AGG | + | chr8_1:65545429-65545448 | Msa1207790:intron | 45.0% |
| !! | TGTTTTGAATAAGGGGGGAG+GGG | - | chr8_1:65545879-65545898 | None:intergenic | 45.0% |
| TCAAGTTTCTCTTAGGGGAG+GGG | - | chr8_1:65545919-65545938 | None:intergenic | 45.0% | |
| TCTTGCTAACAAGTGCCCTA+AGG | - | chr8_1:65547252-65547271 | None:intergenic | 45.0% | |
| ! | GGGGGAGTACATTTGATCTT+TGG | + | chr8_1:65547444-65547463 | Msa1207790:intron | 45.0% |
| ACAACAGTGAAGGTTGTCGT+TGG | + | chr8_1:65547797-65547816 | Msa1207790:intron | 45.0% | |
| CAACAGTGAAGGTTGTCGTT+GGG | + | chr8_1:65547798-65547817 | Msa1207790:intron | 45.0% | |
| CTCCAAGAATGACAGCGTAT+AGG | - | chr8_1:65547933-65547952 | None:intergenic | 45.0% | |
| ATTGACTGACCAAGAACTCC+GGG | - | chr8_1:65548045-65548064 | None:intergenic | 45.0% | |
| !! | TTGGCTGTTATTTCTGCCCA+AGG | - | chr8_1:65548281-65548300 | None:intergenic | 45.0% |
| CCAACTACTCTCTTGTGCAT+TGG | - | chr8_1:65548583-65548602 | None:intergenic | 45.0% | |
| CCAATGCACAAGAGAGTAGT+TGG | + | chr8_1:65548580-65548599 | Msa1207790:CDS | 45.0% | |
| CAGAGTACATCACTTGCCTT+GGG | + | chr8_1:65548640-65548659 | Msa1207790:CDS | 45.0% | |
| AGAGTACATCACTTGCCTTG+GGG | + | chr8_1:65548641-65548660 | Msa1207790:CDS | 45.0% | |
| CGGTAGGTCTCTGAACTATT+TGG | - | chr8_1:65548921-65548940 | None:intergenic | 45.0% | |
| !! | CCAAGGTTTTGATCCTGCAA+CGG | + | chr8_1:65549275-65549294 | Msa1207790:CDS | 45.0% |
| GTTTGTCATTGTGAGGAGGA+AGG | - | chr8_1:65549305-65549324 | None:intergenic | 45.0% | |
| ! | CCTAGTTTGTCATTGTGAGG+AGG | - | chr8_1:65549309-65549328 | None:intergenic | 45.0% |
| CCTCCTCACAATGACAAACT+AGG | + | chr8_1:65549306-65549325 | Msa1207790:CDS | 45.0% | |
| ! | GATGGTAGCGTGGAATTGAT+TGG | + | chr8_1:65549564-65549583 | Msa1207790:CDS | 45.0% |
| TCATCAACAAGAGGTAGACC+AGG | - | chr8_1:65549645-65549664 | None:intergenic | 45.0% | |
| ! | CCTGAAGGCATGTCTAGTAT+CGG | + | chr8_1:65549744-65549763 | Msa1207790:intron | 45.0% |
| ! | CGGTTGTTTGAAACTCACTG+TGG | + | chr8_1:65549922-65549941 | Msa1207790:CDS | 45.0% |
| ! | CGGTGTTTCTGAGGATTCTA+TGG | + | chr8_1:65550002-65550021 | Msa1207790:CDS | 45.0% |
| AAGGCATGTATAGCAGCATG+TGG | + | chr8_1:65550027-65550046 | Msa1207790:CDS | 45.0% | |
| CATGTATAGCAGCATGTGGT+GGG | + | chr8_1:65550031-65550050 | Msa1207790:CDS | 45.0% | |
| CAAGCACAGCACAAGAAATG+TGG | + | chr8_1:65550331-65550350 | Msa1207790:three_prime_UTR | 45.0% | |
| ATTGAGAGAATGGTTGGGTG+AGG | + | chr8_1:65550367-65550386 | Msa1207790:three_prime_UTR | 45.0% | |
| !! | AAATTAAAAAAAATTATTGA+AGG | - | chr8_1:65545985-65546004 | None:intergenic | 5.0% |
| !!! | ACATATTTTAAATTTATTTT+GGG | + | chr8_1:65546453-65546472 | Msa1207790:intron | 5.0% |
| !!! | TTATTTCATATTTTATAATA+GGG | + | chr8_1:65546476-65546495 | Msa1207790:intron | 5.0% |
| !!! | ACATATTTTAATTTTATTTT+GGG | - | chr8_1:65546857-65546876 | None:intergenic | 5.0% |
| !!! | TTTTAAATAATTTTGTAATT+TGG | - | chr8_1:65548797-65548816 | None:intergenic | 5.0% |
| TGGCCACAAAGATAGGACAC+CGG | - | chr8_1:65543784-65543803 | None:intergenic | 50.0% | |
| GTGTCCTATCTTTGTGGCCA+TGG | + | chr8_1:65543784-65543803 | Msa1207790:CDS | 50.0% | |
| GTGAGCACCAACAACAACCA+TGG | - | chr8_1:65543804-65543823 | None:intergenic | 50.0% | |
| AAGACCGAACCGTTCAGAGT+GGG | + | chr8_1:65543842-65543861 | Msa1207790:CDS | 50.0% | |
| TCACTGAGTCCCACTCTGAA+CGG | - | chr8_1:65543854-65543873 | None:intergenic | 50.0% | |
| AGTGATTAGATTGCCGGGTG+AGG | + | chr8_1:65543869-65543888 | Msa1207790:CDS | 50.0% | |
| !! | AACACGATGGGCTGTTCTTG+TGG | + | chr8_1:65543923-65543942 | Msa1207790:CDS | 50.0% |
| ! | GTTCTTGTGGCTGGTTCAAG+TGG | + | chr8_1:65543936-65543955 | Msa1207790:CDS | 50.0% |
| ! | GTGGCTGGTTCAAGTGGTTA+CGG | + | chr8_1:65543942-65543961 | Msa1207790:CDS | 50.0% |
| ! | AACGAGTTGAATCCTAGGCC+TGG | + | chr8_1:65544239-65544258 | Msa1207790:CDS | 50.0% |
| AAACATTGGGTCCCTGTGGA+TGG | - | chr8_1:65544277-65544296 | None:intergenic | 50.0% | |
| CAGCATCAAAGAGGACCAGA+GGG | - | chr8_1:65545028-65545047 | None:intergenic | 50.0% | |
| TTCCAACGCCAGCATCAAAG+AGG | - | chr8_1:65545037-65545056 | None:intergenic | 50.0% | |
| GGTTTGAACCCTGGATGAGA+CGG | + | chr8_1:65545367-65545386 | Msa1207790:intron | 50.0% | |
| AGTAAAGGGTGGAAGTGGCA+AGG | + | chr8_1:65547963-65547982 | Msa1207790:CDS | 50.0% | |
| TTGACTGACCAAGAACTCCG+GGG | - | chr8_1:65548044-65548063 | None:intergenic | 50.0% | |
| !! | GTTTGAGGGTGTCATGCCAA+AGG | + | chr8_1:65548530-65548549 | Msa1207790:CDS | 50.0% |
| AGTTGGGGAACTTACTGTCC+TGG | + | chr8_1:65548597-65548616 | Msa1207790:CDS | 50.0% | |
| ! | CAAGTGATGTACTCTGGAGG+TGG | - | chr8_1:65548636-65548655 | None:intergenic | 50.0% |
| AGGCAAGTGATGTACTCTGG+AGG | - | chr8_1:65548639-65548658 | None:intergenic | 50.0% | |
| CCAAGGCAAGTGATGTACTC+TGG | - | chr8_1:65548642-65548661 | None:intergenic | 50.0% | |
| CCAGAGTACATCACTTGCCT+TGG | + | chr8_1:65548639-65548658 | Msa1207790:CDS | 50.0% | |
| !! | GTGTTGCTTGGATGGAAGAC+AGG | + | chr8_1:65548673-65548692 | Msa1207790:CDS | 50.0% |
| CCGTTGCAGGATCAAAACCT+TGG | - | chr8_1:65549278-65549297 | None:intergenic | 50.0% | |
| CCTTGAGAAGATTGCGGAGA+CGG | + | chr8_1:65549521-65549540 | Msa1207790:CDS | 50.0% | |
| TTGCGGAGACGGTGAAACAT+AGG | + | chr8_1:65549532-65549551 | Msa1207790:CDS | 50.0% | |
| CTACAGGCTCTTAGAGAACC+TGG | + | chr8_1:65549624-65549643 | Msa1207790:CDS | 50.0% | |
| AGCACGACACTTTCACCTGA+AGG | + | chr8_1:65549729-65549748 | Msa1207790:intron | 50.0% | |
| CCGATACTAGACATGCCTTC+AGG | - | chr8_1:65549747-65549766 | None:intergenic | 50.0% | |
| TGTGGGTCACTGACACAGTA+TGG | + | chr8_1:65549940-65549959 | Msa1207790:CDS | 50.0% | |
| GTGGGTCACTGACACAGTAT+GGG | + | chr8_1:65549941-65549960 | Msa1207790:CDS | 50.0% | |
| ! | TTGCAACAGCGGTGTTTCTG+AGG | + | chr8_1:65549993-65550012 | Msa1207790:CDS | 50.0% |
| GCATGTATAGCAGCATGTGG+TGG | + | chr8_1:65550030-65550049 | Msa1207790:CDS | 50.0% | |
| !! | TGAACGGTTCGGTCTTGCGA+CGG | - | chr8_1:65543838-65543857 | None:intergenic | 55.0% |
| CAAGACCGAACCGTTCAGAG+TGG | + | chr8_1:65543841-65543860 | Msa1207790:CDS | 55.0% | |
| GAGTCCCACTCTGAACGGTT+CGG | - | chr8_1:65543849-65543868 | None:intergenic | 55.0% | |
| GATTAGATTGCCGGGTGAGG+TGG | + | chr8_1:65543872-65543891 | Msa1207790:CDS | 55.0% | |
| !! | TGAGGTGGTGGATGATGCTG+AGG | + | chr8_1:65543887-65543906 | Msa1207790:CDS | 55.0% |
| CCAGCATCAAAGAGGACCAG+AGG | - | chr8_1:65545029-65545048 | None:intergenic | 55.0% | |
| CCTCTGGTCCTCTTTGATGC+TGG | + | chr8_1:65545026-65545045 | Msa1207790:intron | 55.0% | |
| GTCCTCTTTGATGCTGGCGT+TGG | + | chr8_1:65545032-65545051 | Msa1207790:intron | 55.0% | |
| AGTGGCTGAGGTTTGAACCC+TGG | + | chr8_1:65545358-65545377 | Msa1207790:intron | 55.0% | |
| AAGGTCCGGGGTTCAAACCT+CGG | - | chr8_1:65545449-65545468 | None:intergenic | 55.0% | |
| GGGAACTTACTGTCCTGGAG+TGG | + | chr8_1:65548602-65548621 | Msa1207790:CDS | 55.0% | |
| ! | ATGTACTCTGGAGGTGGAGC+AGG | - | chr8_1:65548630-65548649 | None:intergenic | 55.0% |
| CCGTCTCCGCAATCTTCTCA+AGG | - | chr8_1:65549524-65549543 | None:intergenic | 55.0% | |
| TAGATTGCCGGGTGAGGTGG+TGG | + | chr8_1:65543875-65543894 | Msa1207790:CDS | 60.0% | |
| GCATCATCCACCACCTCACC+CGG | - | chr8_1:65543885-65543904 | None:intergenic | 60.0% | |
| !! | CGATGGGCTGTTCTTGTGGC+TGG | + | chr8_1:65543927-65543946 | Msa1207790:CDS | 60.0% |
| AAGGTGGCACCGTGCCTTAG+AGG | + | chr8_1:65544705-65544724 | Msa1207790:intron | 60.0% | |
| TACTCCGATCATGGAGGCCC+CGG | + | chr8_1:65548024-65548043 | Msa1207790:CDS | 60.0% | |
| AACTCCGGGGCCTCCATGAT+CGG | - | chr8_1:65548031-65548050 | None:intergenic | 60.0% | |
| GGAGGAAGGTTCACCGTTGC+AGG | - | chr8_1:65549291-65549310 | None:intergenic | 60.0% | |
| GGTGGCCGAGGTTTGAACCC+CGG | + | chr8_1:65545441-65545460 | Msa1207790:intron | 65.0% | |
| CATGGAGGCCCCGGAGTTCT+TGG | + | chr8_1:65548033-65548052 | Msa1207790:CDS | 65.0% | |
| GGTGGAGCAGGTTCCACTCC+AGG | - | chr8_1:65548618-65548637 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 65543531 | 65550496 | 65543531 | ID=Msa1207790;Name=Msa1207790 |
| chr8_1 | mRNA | 65543531 | 65550496 | 65543531 | ID=Msa1207790-mRNA-1;Parent=Msa1207790;Name=Msa1207790-mRNA-1;_AED=0.14;_eAED=0.14;_QI=195|1|1|1|1|1|9|395|503 |
| chr8_1 | exon | 65543531 | 65543980 | 65543531 | ID=Msa1207790-mRNA-1:exon:21505;Parent=Msa1207790-mRNA-1 |
| chr8_1 | exon | 65544149 | 65544313 | 65544149 | ID=Msa1207790-mRNA-1:exon:21506;Parent=Msa1207790-mRNA-1 |
| chr8_1 | exon | 65547898 | 65548054 | 65547898 | ID=Msa1207790-mRNA-1:exon:21507;Parent=Msa1207790-mRNA-1 |
| chr8_1 | exon | 65548322 | 65548407 | 65548322 | ID=Msa1207790-mRNA-1:exon:21508;Parent=Msa1207790-mRNA-1 |
| chr8_1 | exon | 65548495 | 65548694 | 65548495 | ID=Msa1207790-mRNA-1:exon:21509;Parent=Msa1207790-mRNA-1 |
| chr8_1 | exon | 65549023 | 65549071 | 65549023 | ID=Msa1207790-mRNA-1:exon:21510;Parent=Msa1207790-mRNA-1 |
| chr8_1 | exon | 65549177 | 65549386 | 65549177 | ID=Msa1207790-mRNA-1:exon:21511;Parent=Msa1207790-mRNA-1 |
| chr8_1 | exon | 65549480 | 65549686 | 65549480 | ID=Msa1207790-mRNA-1:exon:21512;Parent=Msa1207790-mRNA-1 |
| chr8_1 | exon | 65549919 | 65550496 | 65549919 | ID=Msa1207790-mRNA-1:exon:21513;Parent=Msa1207790-mRNA-1 |
| chr8_1 | five_prime_UTR | 65543531 | 65543725 | 65543531 | ID=Msa1207790-mRNA-1:five_prime_utr;Parent=Msa1207790-mRNA-1 |
| chr8_1 | CDS | 65543726 | 65543980 | 65543726 | ID=Msa1207790-mRNA-1:cds;Parent=Msa1207790-mRNA-1 |
| chr8_1 | CDS | 65544149 | 65544313 | 65544149 | ID=Msa1207790-mRNA-1:cds;Parent=Msa1207790-mRNA-1 |
| chr8_1 | CDS | 65547898 | 65548054 | 65547898 | ID=Msa1207790-mRNA-1:cds;Parent=Msa1207790-mRNA-1 |
| chr8_1 | CDS | 65548322 | 65548407 | 65548322 | ID=Msa1207790-mRNA-1:cds;Parent=Msa1207790-mRNA-1 |
| chr8_1 | CDS | 65548495 | 65548694 | 65548495 | ID=Msa1207790-mRNA-1:cds;Parent=Msa1207790-mRNA-1 |
| chr8_1 | CDS | 65549023 | 65549071 | 65549023 | ID=Msa1207790-mRNA-1:cds;Parent=Msa1207790-mRNA-1 |
| chr8_1 | CDS | 65549177 | 65549386 | 65549177 | ID=Msa1207790-mRNA-1:cds;Parent=Msa1207790-mRNA-1 |
| chr8_1 | CDS | 65549480 | 65549686 | 65549480 | ID=Msa1207790-mRNA-1:cds;Parent=Msa1207790-mRNA-1 |
| chr8_1 | CDS | 65549919 | 65550101 | 65549919 | ID=Msa1207790-mRNA-1:cds;Parent=Msa1207790-mRNA-1 |
| chr8_1 | three_prime_UTR | 65550102 | 65550496 | 65550102 | ID=Msa1207790-mRNA-1:three_prime_utr;Parent=Msa1207790-mRNA-1 |
| Gene Sequence |
| Protein sequence |
