AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1329130

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1329130 MtrunA17_Chr4g0056561 93.548 310 10 1 1 300 185 494 0.0 602
Msa1329130 MtrunA17_Chr3g0135491 53.061 294 126 3 1 283 175 467 6.09e-110 327
Msa1329130 MtrunA17_Chr1g0151801 52.396 313 133 4 1 300 184 493 4.56e-103 310
Msa1329130 MtrunA17_Chr7g0248651 37.500 304 162 4 1 283 173 469 4.59e-64 209
Msa1329130 MtrunA17_Chr7g0226441 34.615 208 102 4 100 283 1 198 2.76e-34 124
Msa1329130 MtrunA17_Chr7g0246051 52.128 94 45 0 1 94 172 265 1.33e-30 116
Msa1329130 MtrunA17_Chr7g0226431 66.667 63 21 0 32 94 1 63 2.88e-27 101
Msa1329130 MtrunA17_Chr7g0246061 31.579 190 105 5 112 285 8 188 3.14e-21 89.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1329130 AT1G62710.1 66.667 312 90 3 1 300 177 486 5.28e-153 437
Msa1329130 AT4G32940.1 53.376 311 133 3 1 300 185 494 1.43e-102 309
Msa1329130 AT2G25940.1 50.161 311 142 4 1 300 170 478 4.72e-97 294
Msa1329130 AT3G20210.1 37.838 296 164 5 1 279 172 464 1.45e-53 181

Find 93 sgRNAs with CRISPR-Local

Find 322 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCATATACATACGGCATATT+TGG 0.217041 8_4:-47414048 None:intergenic
AAGACAAATTAAATTAAATT+AGG 0.218095 8_4:+47416174 Msa1329130:three_prime_UTR
GCGAGTCACACAATCTAAAA+AGG 0.244722 8_4:+47414743 Msa1329130:intron
TGACAAACTAGGATCTAAAA+TGG 0.296605 8_4:+47415038 Msa1329130:CDS
CGGTGTTTCTGAGGATTCTA+TGG 0.301877 8_4:+47415723 Msa1329130:CDS
AACAGTTTCTACTTTATCTT+AGG 0.305913 8_4:-47416007 None:intergenic
AATTACAACAACTATGCATT+AGG 0.321118 8_4:+47414916 Msa1329130:CDS
GCACTATAACCTCTGTTTGA+TGG 0.321858 8_4:-47415796 None:intergenic
TGTGGGTCACTGACACAGTA+TGG 0.329644 8_4:+47415661 Msa1329130:CDS
ATAAAATCTCTGCATCTCTT+TGG 0.334302 8_4:-47415071 None:intergenic
CTCGTCAATTGTGAAATTGC+TGG 0.336695 8_4:+47415878 Msa1329130:three_prime_UTR
CATGGAGGCCCCGGAGTTCT+TGG 0.345994 8_4:+47413793 Msa1329130:five_prime_UTR
GATGGTAGCGTGGAATTGAT+TGG 0.366010 8_4:+47415285 Msa1329130:CDS
GGAGGAAGGTTCACCGTTGC+AGG 0.366394 8_4:-47415009 None:intergenic
ACATTATGTTGAACATATAT+TGG 0.373351 8_4:-47415944 None:intergenic
CCAATGCACAAGAGAGTAGT+TGG 0.407355 8_4:+47414301 Msa1329130:CDS
ACATAAACATTAAGATCCTT+TGG 0.408253 8_4:-47414267 None:intergenic
TTTATATATTACTCCGATCA+TGG 0.414926 8_4:+47413775 Msa1329130:five_prime_UTR
CAGAGTACATCACTTGCCTT+GGG 0.421295 8_4:+47414361 Msa1329130:CDS
GGTTCTCATGTGATGCAATA+TGG 0.435826 8_4:+47414937 Msa1329130:CDS
AAAAGGTTCTTCAGTTCTAC+AGG 0.438706 8_4:+47415329 Msa1329130:CDS
CCAACTACTCTCTTGTGCAT+TGG 0.445049 8_4:-47414301 None:intergenic
GGGATTTGTATAGTGTTGCT+TGG 0.446757 8_4:+47414382 Msa1329130:CDS
GTAATTTGCAATTGAGAGAA+TGG 0.447007 8_4:+47416078 Msa1329130:three_prime_UTR
TTGAAGAAGAAACATGCATC+TGG 0.455830 8_4:+47414090 Msa1329130:CDS
TTTGTATAGTGTTGCTTGGA+TGG 0.457289 8_4:+47414386 Msa1329130:CDS
ATATATAAATATCCTATCTT+CGG 0.458355 8_4:-47413761 None:intergenic
AAGATAAAGTAGAAACTGTT+GGG 0.472867 8_4:+47416010 Msa1329130:three_prime_UTR
ATGTACTCTGGAGGTGGAGC+AGG 0.473851 8_4:-47414348 None:intergenic
TTACTGTTTGGTCCAACAAA+AGG 0.476498 8_4:+47415312 Msa1329130:CDS
CCAGAGTACATCACTTGCCT+TGG 0.478537 8_4:+47414360 Msa1329130:CDS
AAACATAGGAATCATTTAGA+TGG 0.482034 8_4:+47415267 Msa1329130:CDS
TACTCCGATCATGGAGGCCC+CGG 0.482412 8_4:+47413784 Msa1329130:five_prime_UTR
GGTGAAACAACAATACAAAT+CGG 0.482608 8_4:+47414771 Msa1329130:CDS
CCTTGAGAAGATTGCGGAGA+CGG 0.485427 8_4:+47415242 Msa1329130:CDS
ACTTTGTGTGGTACACTACA+TGG 0.485469 8_4:+47415822 Msa1329130:exon
CAATGCACAAGAGAGTAGTT+GGG 0.486134 8_4:+47414302 Msa1329130:CDS
CTACAGGCTCTTAGAGAACC+TGG 0.489099 8_4:+47415345 Msa1329130:CDS
ACATATATTGGAGGCGCATA+GGG 0.489470 8_4:-47415932 None:intergenic
GGTGGAGCAGGTTCCACTCC+AGG 0.496020 8_4:-47414336 None:intergenic
AACATATATTGGAGGCGCAT+AGG 0.498831 8_4:-47415933 None:intergenic
CCTCCTCACAATGACAAACT+AGG 0.499499 8_4:+47415027 Msa1329130:CDS
AGTTGGGGAACTTACTGTCC+TGG 0.508806 8_4:+47414318 Msa1329130:CDS
AACTCCGGGGCCTCCATGAT+CGG 0.509290 8_4:-47413788 None:intergenic
GTGTTGCTTGGATGGAAGAC+AGG 0.519440 8_4:+47414394 Msa1329130:CDS
TGAAAGTGGTAGCATGTTTG+AGG 0.520691 8_4:+47414236 Msa1329130:CDS
TTCTGAGGATTCTATGGAGA+AGG 0.527244 8_4:+47415729 Msa1329130:CDS
ATTGACTGACCAAGAACTCC+GGG 0.529158 8_4:-47413802 None:intergenic
TACATTGAAGCTTGTGAAAG+TGG 0.531816 8_4:+47414222 Msa1329130:CDS
TAAGATAAAGTAGAAACTGT+TGG 0.533052 8_4:+47416009 Msa1329130:three_prime_UTR
CCAAGGCAAGTGATGTACTC+TGG 0.534621 8_4:-47414360 None:intergenic
CCGTCTCCGCAATCTTCTCA+AGG 0.541335 8_4:-47415242 None:intergenic
GATCCTAGTTTGTCATTGTG+AGG 0.542298 8_4:-47415030 None:intergenic
TAAAGTAGAAACTGTTGGGT+AGG 0.543063 8_4:+47416014 Msa1329130:three_prime_UTR
TTGCAACAGCGGTGTTTCTG+AGG 0.547552 8_4:+47415714 Msa1329130:CDS
TTATAGTGCTTAACTTTGTG+TGG 0.550783 8_4:+47415810 Msa1329130:exon
TTTGCAATTGAGAGAATGGT+TGG 0.552160 8_4:+47416082 Msa1329130:three_prime_UTR
CATGTATAGCAGCATGTGGT+GGG 0.553960 8_4:+47415752 Msa1329130:CDS
TAAGAGATTAGATCATCAAA+CGG 0.556011 8_4:+47415203 Msa1329130:CDS
TTGCGGAGACGGTGAAACAT+AGG 0.557136 8_4:+47415253 Msa1329130:CDS
TTATGTTGAACATATATTGG+AGG 0.557765 8_4:-47415941 None:intergenic
TTAGTTGTGAAAGAGTAAGC+AGG 0.560252 8_4:+47415980 Msa1329130:three_prime_UTR
CAAGTGATGTACTCTGGAGG+TGG 0.562964 8_4:-47414354 None:intergenic
GTTTGTCATTGTGAGGAGGA+AGG 0.567849 8_4:-47415023 None:intergenic
GAAAGTGGTAGCATGTTTGA+GGG 0.570395 8_4:+47414237 Msa1329130:CDS
GAAAAGCTATATTTGTACCA+AGG 0.574916 8_4:+47414979 Msa1329130:CDS
TATGCCGTATGTATATGCTA+TGG 0.580005 8_4:+47414053 Msa1329130:CDS
AAATCCATAGCATATACATA+CGG 0.584476 8_4:-47414057 None:intergenic
TTGCAATTGAGAGAATGGTT+GGG 0.585076 8_4:+47416083 Msa1329130:three_prime_UTR
GCATGTATAGCAGCATGTGG+TGG 0.587228 8_4:+47415751 Msa1329130:CDS
AATTGACTGACCAAGAACTC+CGG 0.593462 8_4:-47413803 None:intergenic
GGTTGTTTGAAACTCACTGT+GGG 0.596816 8_4:+47415644 Msa1329130:CDS
GTTTGAGGGTGTCATGCCAA+AGG 0.603641 8_4:+47414251 Msa1329130:CDS
CAAGCACATCACAAGAAATG+TGG 0.603856 8_4:+47416052 Msa1329130:three_prime_UTR
TTTGCGAACATTTGCAACAG+CGG 0.609184 8_4:+47415703 Msa1329130:CDS
ATTGAGAGAATGGTTGGGTG+AGG 0.617217 8_4:+47416088 Msa1329130:three_prime_UTR
CCTAGTTTGTCATTGTGAGG+AGG 0.618985 8_4:-47415027 None:intergenic
CGGTTGTTTGAAACTCACTG+TGG 0.619149 8_4:+47415643 Msa1329130:CDS
GGGAACTTACTGTCCTGGAG+TGG 0.620628 8_4:+47414323 Msa1329130:CDS
AGAAATCCTTGAGAAGATTG+CGG 0.621530 8_4:+47415236 Msa1329130:CDS
AAGAAGAAACATGCATCTGG+AGG 0.625535 8_4:+47414093 Msa1329130:CDS
TCATCAACAAGAGGTAGACC+AGG 0.625602 8_4:-47415363 None:intergenic
CCGTTGCAGGATCAAAACCT+TGG 0.635618 8_4:-47414996 None:intergenic
AATGCACAAGAGAGTAGTTG+GGG 0.641706 8_4:+47414303 Msa1329130:CDS
GTGGGTCACTGACACAGTAT+GGG 0.645354 8_4:+47415662 Msa1329130:CDS
GAATCATTTAGATGGTAGCG+TGG 0.666047 8_4:+47415275 Msa1329130:CDS
AGAGTACATCACTTGCCTTG+GGG 0.670035 8_4:+47414362 Msa1329130:CDS
AGGCAAGTGATGTACTCTGG+AGG 0.687328 8_4:-47414357 None:intergenic
AAGGCATGTATAGCAGCATG+TGG 0.690392 8_4:+47415748 Msa1329130:CDS
CAACACTATACAAATCCCCA+AGG 0.692818 8_4:-47414377 None:intergenic
CTATTACATCCATCAAACAG+AGG 0.726919 8_4:+47415787 Msa1329130:CDS
ATATATTACTCCGATCATGG+AGG 0.732812 8_4:+47413778 Msa1329130:five_prime_UTR
TTGACTGACCAAGAACTCCG+GGG 0.765346 8_4:-47413801 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATAAATATCCTATCTT+CGG - chr8_4:47413764-47413783 None:intergenic 15.0%
!!! AAAAAATGTCATTTTATGTT+TGG + chr8_4:47414163-47414182 Msa1329130:intron 15.0%
!! ATATATAAATATCCTATCTT+CGG - chr8_4:47413764-47413783 None:intergenic 15.0%
!!! AAAAAATGTCATTTTATGTT+TGG + chr8_4:47414163-47414182 Msa1329130:intron 15.0%
!!! AATTAAATTTTGATGTGACT+AGG + chr8_4:47413971-47413990 Msa1329130:intron 20.0%
!!! ATGGTAATATTTCATTTTTC+CGG + chr8_4:47414126-47414145 Msa1329130:intron 20.0%
!! ATTACATTATTTCAAATGGT+TGG - chr8_4:47414431-47414450 None:intergenic 20.0%
!! GAACATTACATTATTTCAAA+TGG - chr8_4:47414435-47414454 None:intergenic 20.0%
!! ACAAATTATGCAAAGTATAT+AGG - chr8_4:47414472-47414491 None:intergenic 20.0%
!! TTTGTTAGTAATTAGTACTT+AGG - chr8_4:47414567-47414586 None:intergenic 20.0%
!! CTAATTACTAACAAATTTGT+AGG + chr8_4:47414572-47414591 Msa1329130:intron 20.0%
!! AACTCAAAAAGTTTGTAATT+TGG - chr8_4:47414599-47414618 None:intergenic 20.0%
!!! CTATTTGGAGATTTTTAAAT+AGG - chr8_4:47414627-47414646 None:intergenic 20.0%
!!! TTATGTTTTAATTTTTGTGC+AGG + chr8_4:47414876-47414895 Msa1329130:intron 20.0%
!!! ATTTGGTTGATAATAAGTTA+AGG - chr8_4:47415124-47415143 None:intergenic 20.0%
!! TTGATAAAATATAATCAGTG+TGG + chr8_4:47415518-47415537 Msa1329130:intron 20.0%
!! CTTATTAGTATAACATACAA+TGG + chr8_4:47415583-47415602 Msa1329130:intron 20.0%
!! ACATTATGTTGAACATATAT+TGG - chr8_4:47415947-47415966 None:intergenic 20.0%
!!! GATGATTGTTTTAGTATTTT+TGG + chr8_4:47416110-47416129 Msa1329130:three_prime_UTR 20.0%
!!! AATTAAATTTTGATGTGACT+AGG + chr8_4:47413971-47413990 Msa1329130:intron 20.0%
!!! ATGGTAATATTTCATTTTTC+CGG + chr8_4:47414126-47414145 Msa1329130:intron 20.0%
!! ATTACATTATTTCAAATGGT+TGG - chr8_4:47414431-47414450 None:intergenic 20.0%
!! GAACATTACATTATTTCAAA+TGG - chr8_4:47414435-47414454 None:intergenic 20.0%
!! ACAAATTATGCAAAGTATAT+AGG - chr8_4:47414472-47414491 None:intergenic 20.0%
!! TTTGTTAGTAATTAGTACTT+AGG - chr8_4:47414567-47414586 None:intergenic 20.0%
!! CTAATTACTAACAAATTTGT+AGG + chr8_4:47414572-47414591 Msa1329130:intron 20.0%
!! AACTCAAAAAGTTTGTAATT+TGG - chr8_4:47414599-47414618 None:intergenic 20.0%
!!! CTATTTGGAGATTTTTAAAT+AGG - chr8_4:47414627-47414646 None:intergenic 20.0%
!!! TTATGTTTTAATTTTTGTGC+AGG + chr8_4:47414876-47414895 Msa1329130:intron 20.0%
!!! ATTTGGTTGATAATAAGTTA+AGG - chr8_4:47415124-47415143 None:intergenic 20.0%
!! TTGATAAAATATAATCAGTG+TGG + chr8_4:47415518-47415537 Msa1329130:intron 20.0%
!! CTTATTAGTATAACATACAA+TGG + chr8_4:47415583-47415602 Msa1329130:intron 20.0%
!! ACATTATGTTGAACATATAT+TGG - chr8_4:47415947-47415966 None:intergenic 20.0%
!!! GATGATTGTTTTAGTATTTT+TGG + chr8_4:47416110-47416129 Msa1329130:three_prime_UTR 20.0%
! TTTATATATTACTCCGATCA+TGG + chr8_4:47413775-47413794 Msa1329130:five_prime_UTR 25.0%
! CATAATTAATCCTTTGAGTA+GGG + chr8_4:47413864-47413883 Msa1329130:intron 25.0%
! TCATATGATCAACGTATATT+TGG - chr8_4:47413932-47413951 None:intergenic 25.0%
! AAATCCATAGCATATACATA+CGG - chr8_4:47414060-47414079 None:intergenic 25.0%
!! TTTTTACAAGCATCATTTAC+CGG - chr8_4:47414148-47414167 None:intergenic 25.0%
! ACATAAACATTAAGATCCTT+TGG - chr8_4:47414270-47414289 None:intergenic 25.0%
! TAATTTGGTCCTTGAATTTA+GGG - chr8_4:47414503-47414522 None:intergenic 25.0%
!! ACTTTCACTTGTTAATTACT+CGG - chr8_4:47414662-47414681 None:intergenic 25.0%
! AATTACAACAACTATGCATT+AGG + chr8_4:47414916-47414935 Msa1329130:CDS 25.0%
!! TTGATAATAAGTTAAGGTTG+AGG - chr8_4:47415118-47415137 None:intergenic 25.0%
! ATCTAATCTCTTATACTGAA+AGG - chr8_4:47415196-47415215 None:intergenic 25.0%
! TAAGAGATTAGATCATCAAA+CGG + chr8_4:47415203-47415222 Msa1329130:CDS 25.0%
! AAACATAGGAATCATTTAGA+TGG + chr8_4:47415267-47415286 Msa1329130:CDS 25.0%
! TTATGTTGAACATATATTGG+AGG - chr8_4:47415944-47415963 None:intergenic 25.0%
! AACAGTTTCTACTTTATCTT+AGG - chr8_4:47416010-47416029 None:intergenic 25.0%
! TAAGATAAAGTAGAAACTGT+TGG + chr8_4:47416009-47416028 Msa1329130:three_prime_UTR 25.0%
! AAGATAAAGTAGAAACTGTT+GGG + chr8_4:47416010-47416029 Msa1329130:three_prime_UTR 25.0%
! TTTATATATTACTCCGATCA+TGG + chr8_4:47413775-47413794 Msa1329130:five_prime_UTR 25.0%
! CATAATTAATCCTTTGAGTA+GGG + chr8_4:47413864-47413883 Msa1329130:intron 25.0%
! TCATATGATCAACGTATATT+TGG - chr8_4:47413932-47413951 None:intergenic 25.0%
! AAATCCATAGCATATACATA+CGG - chr8_4:47414060-47414079 None:intergenic 25.0%
!! TTTTTACAAGCATCATTTAC+CGG - chr8_4:47414148-47414167 None:intergenic 25.0%
! ACATAAACATTAAGATCCTT+TGG - chr8_4:47414270-47414289 None:intergenic 25.0%
! TAATTTGGTCCTTGAATTTA+GGG - chr8_4:47414503-47414522 None:intergenic 25.0%
!! ACTTTCACTTGTTAATTACT+CGG - chr8_4:47414662-47414681 None:intergenic 25.0%
! AATTACAACAACTATGCATT+AGG + chr8_4:47414916-47414935 Msa1329130:CDS 25.0%
!! TTGATAATAAGTTAAGGTTG+AGG - chr8_4:47415118-47415137 None:intergenic 25.0%
! ATCTAATCTCTTATACTGAA+AGG - chr8_4:47415196-47415215 None:intergenic 25.0%
! TAAGAGATTAGATCATCAAA+CGG + chr8_4:47415203-47415222 Msa1329130:CDS 25.0%
! AAACATAGGAATCATTTAGA+TGG + chr8_4:47415267-47415286 Msa1329130:CDS 25.0%
! TTATGTTGAACATATATTGG+AGG - chr8_4:47415944-47415963 None:intergenic 25.0%
! AACAGTTTCTACTTTATCTT+AGG - chr8_4:47416010-47416029 None:intergenic 25.0%
! TAAGATAAAGTAGAAACTGT+TGG + chr8_4:47416009-47416028 Msa1329130:three_prime_UTR 25.0%
! AAGATAAAGTAGAAACTGTT+GGG + chr8_4:47416010-47416029 Msa1329130:three_prime_UTR 25.0%
GCATAATTAATCCTTTGAGT+AGG + chr8_4:47413863-47413882 Msa1329130:intron 30.0%
ACATCAAAAAGAGAATCACT+TGG - chr8_4:47414021-47414040 None:intergenic 30.0%
! AGTGATTCTCTTTTTGATGT+AGG + chr8_4:47414021-47414040 Msa1329130:intron 30.0%
! GTGATTCTCTTTTTGATGTA+GGG + chr8_4:47414022-47414041 Msa1329130:intron 30.0%
GTAATTTGGTCCTTGAATTT+AGG - chr8_4:47414504-47414523 None:intergenic 30.0%
! TAAGTCGATTGATCATGTTT+TGG + chr8_4:47414681-47414700 Msa1329130:intron 30.0%
ACACAATCTAAAAAGGGAAA+CGG + chr8_4:47414750-47414769 Msa1329130:CDS 30.0%
GGTGAAACAACAATACAAAT+CGG + chr8_4:47414771-47414790 Msa1329130:CDS 30.0%
AACAACAATACAAATCGGTA+AGG + chr8_4:47414776-47414795 Msa1329130:intron 30.0%
! TTTTTGTGCAGGTTAAAGAA+CGG + chr8_4:47414887-47414906 Msa1329130:intron 30.0%
! TAGCTTTTCATCTGTAATGT+TGG - chr8_4:47414968-47414987 None:intergenic 30.0%
GAAAAGCTATATTTGTACCA+AGG + chr8_4:47414979-47414998 Msa1329130:CDS 30.0%
TGACAAACTAGGATCTAAAA+TGG + chr8_4:47415038-47415057 Msa1329130:CDS 30.0%
ATAAAATCTCTGCATCTCTT+TGG - chr8_4:47415074-47415093 None:intergenic 30.0%
! ATGCAGAGATTTTATTCATG+TGG + chr8_4:47415079-47415098 Msa1329130:CDS 30.0%
! TGCAGAGATTTTATTCATGT+GGG + chr8_4:47415080-47415099 Msa1329130:CDS 30.0%
! GATTTTATTCATGTGGGAAA+TGG + chr8_4:47415086-47415105 Msa1329130:CDS 30.0%
CAATCATTTGAACAAGGATT+TGG - chr8_4:47415141-47415160 None:intergenic 30.0%
! TTGATTGGAGTTTTACTGTT+TGG + chr8_4:47415300-47415319 Msa1329130:CDS 30.0%
ATTGGGAATGCTTAAAATCA+AGG + chr8_4:47415385-47415404 Msa1329130:intron 30.0%
TTGGGAATGCTTAAAATCAA+GGG + chr8_4:47415386-47415405 Msa1329130:intron 30.0%
TAAGTTATGAAGACAGATGT+CGG - chr8_4:47415567-47415586 None:intergenic 30.0%
TTATAGTGCTTAACTTTGTG+TGG + chr8_4:47415810-47415829 Msa1329130:exon 30.0%
! GTAATTTGCAATTGAGAGAA+TGG + chr8_4:47416078-47416097 Msa1329130:three_prime_UTR 30.0%
GCATAATTAATCCTTTGAGT+AGG + chr8_4:47413863-47413882 Msa1329130:intron 30.0%
ACATCAAAAAGAGAATCACT+TGG - chr8_4:47414021-47414040 None:intergenic 30.0%
! AGTGATTCTCTTTTTGATGT+AGG + chr8_4:47414021-47414040 Msa1329130:intron 30.0%
! GTGATTCTCTTTTTGATGTA+GGG + chr8_4:47414022-47414041 Msa1329130:intron 30.0%
GTAATTTGGTCCTTGAATTT+AGG - chr8_4:47414504-47414523 None:intergenic 30.0%
! TAAGTCGATTGATCATGTTT+TGG + chr8_4:47414681-47414700 Msa1329130:intron 30.0%
ACACAATCTAAAAAGGGAAA+CGG + chr8_4:47414750-47414769 Msa1329130:CDS 30.0%
GGTGAAACAACAATACAAAT+CGG + chr8_4:47414771-47414790 Msa1329130:CDS 30.0%
AACAACAATACAAATCGGTA+AGG + chr8_4:47414776-47414795 Msa1329130:intron 30.0%
! TTTTTGTGCAGGTTAAAGAA+CGG + chr8_4:47414887-47414906 Msa1329130:intron 30.0%
! TAGCTTTTCATCTGTAATGT+TGG - chr8_4:47414968-47414987 None:intergenic 30.0%
GAAAAGCTATATTTGTACCA+AGG + chr8_4:47414979-47414998 Msa1329130:CDS 30.0%
TGACAAACTAGGATCTAAAA+TGG + chr8_4:47415038-47415057 Msa1329130:CDS 30.0%
ATAAAATCTCTGCATCTCTT+TGG - chr8_4:47415074-47415093 None:intergenic 30.0%
! ATGCAGAGATTTTATTCATG+TGG + chr8_4:47415079-47415098 Msa1329130:CDS 30.0%
! TGCAGAGATTTTATTCATGT+GGG + chr8_4:47415080-47415099 Msa1329130:CDS 30.0%
! GATTTTATTCATGTGGGAAA+TGG + chr8_4:47415086-47415105 Msa1329130:CDS 30.0%
CAATCATTTGAACAAGGATT+TGG - chr8_4:47415141-47415160 None:intergenic 30.0%
! TTGATTGGAGTTTTACTGTT+TGG + chr8_4:47415300-47415319 Msa1329130:CDS 30.0%
ATTGGGAATGCTTAAAATCA+AGG + chr8_4:47415385-47415404 Msa1329130:intron 30.0%
TTGGGAATGCTTAAAATCAA+GGG + chr8_4:47415386-47415405 Msa1329130:intron 30.0%
TAAGTTATGAAGACAGATGT+CGG - chr8_4:47415567-47415586 None:intergenic 30.0%
TTATAGTGCTTAACTTTGTG+TGG + chr8_4:47415810-47415829 Msa1329130:exon 30.0%
! GTAATTTGCAATTGAGAGAA+TGG + chr8_4:47416078-47416097 Msa1329130:three_prime_UTR 30.0%
ATATATTACTCCGATCATGG+AGG + chr8_4:47413778-47413797 Msa1329130:five_prime_UTR 35.0%
TGTAATTCTACCCTACTCAA+AGG - chr8_4:47413877-47413896 None:intergenic 35.0%
ATGTGACTAGGTTTATCCTT+GGG + chr8_4:47413983-47414002 Msa1329130:intron 35.0%
GCATATACATACGGCATATT+TGG - chr8_4:47414051-47414070 None:intergenic 35.0%
TATGCCGTATGTATATGCTA+TGG + chr8_4:47414053-47414072 Msa1329130:CDS 35.0%
TTGAAGAAGAAACATGCATC+TGG + chr8_4:47414090-47414109 Msa1329130:CDS 35.0%
ATCTGGAGGTTACAAAAAGA+TGG + chr8_4:47414107-47414126 Msa1329130:CDS 35.0%
! GTGTGATTTTGTGCTTGTAT+AGG + chr8_4:47414194-47414213 Msa1329130:intron 35.0%
TACATTGAAGCTTGTGAAAG+TGG + chr8_4:47414222-47414241 Msa1329130:CDS 35.0%
!! TTTGTATAGTGTTGCTTGGA+TGG + chr8_4:47414386-47414405 Msa1329130:CDS 35.0%
TGTTTGCATCCCTAAATTCA+AGG + chr8_4:47414491-47414510 Msa1329130:intron 35.0%
! TCACTTGTTAATTACTCGGT+AGG - chr8_4:47414658-47414677 None:intergenic 35.0%
CGAGTCACACAATCTAAAAA+GGG + chr8_4:47414744-47414763 Msa1329130:CDS 35.0%
AGTATCCCTATTAGCATTTC+AGG + chr8_4:47414826-47414845 Msa1329130:intron 35.0%
CTTCTCCTGAAATGCTAATA+GGG - chr8_4:47414834-47414853 None:intergenic 35.0%
TCTTCTCCTGAAATGCTAAT+AGG - chr8_4:47414835-47414854 None:intergenic 35.0%
ACTGCACAATCATTTGAACA+AGG - chr8_4:47415147-47415166 None:intergenic 35.0%
AGAAATCCTTGAGAAGATTG+CGG + chr8_4:47415236-47415255 Msa1329130:CDS 35.0%
TTACTGTTTGGTCCAACAAA+AGG + chr8_4:47415312-47415331 Msa1329130:CDS 35.0%
! AGAACTGAAGAACCTTTTGT+TGG - chr8_4:47415327-47415346 None:intergenic 35.0%
AAAAGGTTCTTCAGTTCTAC+AGG + chr8_4:47415329-47415348 Msa1329130:CDS 35.0%
!! TCTACCTCTTGTTGATGATT+GGG + chr8_4:47415368-47415387 Msa1329130:intron 35.0%
TACGTTATCGATGTTCGATT+TGG + chr8_4:47415609-47415628 Msa1329130:intron 35.0%
!!! GATGTTCGATTTGGTTTTGT+AGG + chr8_4:47415618-47415637 Msa1329130:intron 35.0%
!!! TCGATTTGGTTTTGTAGGTT+CGG + chr8_4:47415623-47415642 Msa1329130:intron 35.0%
CTATTACATCCATCAAACAG+AGG + chr8_4:47415787-47415806 Msa1329130:CDS 35.0%
TTAGTTGTGAAAGAGTAAGC+AGG + chr8_4:47415980-47415999 Msa1329130:three_prime_UTR 35.0%
TAAAGTAGAAACTGTTGGGT+AGG + chr8_4:47416014-47416033 Msa1329130:three_prime_UTR 35.0%
TTTGCAATTGAGAGAATGGT+TGG + chr8_4:47416082-47416101 Msa1329130:three_prime_UTR 35.0%
TTGCAATTGAGAGAATGGTT+GGG + chr8_4:47416083-47416102 Msa1329130:three_prime_UTR 35.0%
ATATATTACTCCGATCATGG+AGG + chr8_4:47413778-47413797 Msa1329130:five_prime_UTR 35.0%
TGTAATTCTACCCTACTCAA+AGG - chr8_4:47413877-47413896 None:intergenic 35.0%
ATGTGACTAGGTTTATCCTT+GGG + chr8_4:47413983-47414002 Msa1329130:intron 35.0%
GCATATACATACGGCATATT+TGG - chr8_4:47414051-47414070 None:intergenic 35.0%
TATGCCGTATGTATATGCTA+TGG + chr8_4:47414053-47414072 Msa1329130:CDS 35.0%
TTGAAGAAGAAACATGCATC+TGG + chr8_4:47414090-47414109 Msa1329130:CDS 35.0%
ATCTGGAGGTTACAAAAAGA+TGG + chr8_4:47414107-47414126 Msa1329130:CDS 35.0%
! GTGTGATTTTGTGCTTGTAT+AGG + chr8_4:47414194-47414213 Msa1329130:intron 35.0%
TACATTGAAGCTTGTGAAAG+TGG + chr8_4:47414222-47414241 Msa1329130:CDS 35.0%
!! TTTGTATAGTGTTGCTTGGA+TGG + chr8_4:47414386-47414405 Msa1329130:CDS 35.0%
TGTTTGCATCCCTAAATTCA+AGG + chr8_4:47414491-47414510 Msa1329130:intron 35.0%
! TCACTTGTTAATTACTCGGT+AGG - chr8_4:47414658-47414677 None:intergenic 35.0%
CGAGTCACACAATCTAAAAA+GGG + chr8_4:47414744-47414763 Msa1329130:CDS 35.0%
AGTATCCCTATTAGCATTTC+AGG + chr8_4:47414826-47414845 Msa1329130:intron 35.0%
CTTCTCCTGAAATGCTAATA+GGG - chr8_4:47414834-47414853 None:intergenic 35.0%
TCTTCTCCTGAAATGCTAAT+AGG - chr8_4:47414835-47414854 None:intergenic 35.0%
ACTGCACAATCATTTGAACA+AGG - chr8_4:47415147-47415166 None:intergenic 35.0%
AGAAATCCTTGAGAAGATTG+CGG + chr8_4:47415236-47415255 Msa1329130:CDS 35.0%
TTACTGTTTGGTCCAACAAA+AGG + chr8_4:47415312-47415331 Msa1329130:CDS 35.0%
! AGAACTGAAGAACCTTTTGT+TGG - chr8_4:47415327-47415346 None:intergenic 35.0%
AAAAGGTTCTTCAGTTCTAC+AGG + chr8_4:47415329-47415348 Msa1329130:CDS 35.0%
!! TCTACCTCTTGTTGATGATT+GGG + chr8_4:47415368-47415387 Msa1329130:intron 35.0%
TACGTTATCGATGTTCGATT+TGG + chr8_4:47415609-47415628 Msa1329130:intron 35.0%
!!! GATGTTCGATTTGGTTTTGT+AGG + chr8_4:47415618-47415637 Msa1329130:intron 35.0%
!!! TCGATTTGGTTTTGTAGGTT+CGG + chr8_4:47415623-47415642 Msa1329130:intron 35.0%
CTATTACATCCATCAAACAG+AGG + chr8_4:47415787-47415806 Msa1329130:CDS 35.0%
TTAGTTGTGAAAGAGTAAGC+AGG + chr8_4:47415980-47415999 Msa1329130:three_prime_UTR 35.0%
TAAAGTAGAAACTGTTGGGT+AGG + chr8_4:47416014-47416033 Msa1329130:three_prime_UTR 35.0%
TTTGCAATTGAGAGAATGGT+TGG + chr8_4:47416082-47416101 Msa1329130:three_prime_UTR 35.0%
TTGCAATTGAGAGAATGGTT+GGG + chr8_4:47416083-47416102 Msa1329130:three_prime_UTR 35.0%
TCAACAGCAAATCCGAAGAT+AGG + chr8_4:47413749-47413768 Msa1329130:five_prime_UTR 40.0%
AATTGACTGACCAAGAACTC+CGG - chr8_4:47413806-47413825 None:intergenic 40.0%
! TGGAACTTTTTACGTGCAAG+AGG - chr8_4:47413912-47413931 None:intergenic 40.0%
GATGTGACTAGGTTTATCCT+TGG + chr8_4:47413982-47414001 Msa1329130:intron 40.0%
AAGAAGAAACATGCATCTGG+AGG + chr8_4:47414093-47414112 Msa1329130:CDS 40.0%
TGAAAGTGGTAGCATGTTTG+AGG + chr8_4:47414236-47414255 Msa1329130:CDS 40.0%
GAAAGTGGTAGCATGTTTGA+GGG + chr8_4:47414237-47414256 Msa1329130:CDS 40.0%
CAATGCACAAGAGAGTAGTT+GGG + chr8_4:47414302-47414321 Msa1329130:CDS 40.0%
AATGCACAAGAGAGTAGTTG+GGG + chr8_4:47414303-47414322 Msa1329130:CDS 40.0%
CAACACTATACAAATCCCCA+AGG - chr8_4:47414380-47414399 None:intergenic 40.0%
! GGGATTTGTATAGTGTTGCT+TGG + chr8_4:47414382-47414401 Msa1329130:CDS 40.0%
CTCGCTGCATAATACAAAAC+AGG - chr8_4:47414728-47414747 None:intergenic 40.0%
GCGAGTCACACAATCTAAAA+AGG + chr8_4:47414743-47414762 Msa1329130:intron 40.0%
GGTTCTCATGTGATGCAATA+TGG + chr8_4:47414937-47414956 Msa1329130:CDS 40.0%
! GATCCTAGTTTGTCATTGTG+AGG - chr8_4:47415033-47415052 None:intergenic 40.0%
! GAATCATTTAGATGGTAGCG+TGG + chr8_4:47415275-47415294 Msa1329130:CDS 40.0%
!! GTCTACCTCTTGTTGATGAT+TGG + chr8_4:47415367-47415386 Msa1329130:intron 40.0%
CATTCCCAATCATCAACAAG+AGG - chr8_4:47415375-47415394 None:intergenic 40.0%
! GGTTGTTTGAAACTCACTGT+GGG + chr8_4:47415644-47415663 Msa1329130:CDS 40.0%
TTTGCGAACATTTGCAACAG+CGG + chr8_4:47415703-47415722 Msa1329130:CDS 40.0%
! TTCTGAGGATTCTATGGAGA+AGG + chr8_4:47415729-47415748 Msa1329130:CDS 40.0%
GCACTATAACCTCTGTTTGA+TGG - chr8_4:47415799-47415818 None:intergenic 40.0%
ACTTTGTGTGGTACACTACA+TGG + chr8_4:47415822-47415841 Msa1329130:exon 40.0%
CTCGTCAATTGTGAAATTGC+TGG + chr8_4:47415878-47415897 Msa1329130:three_prime_UTR 40.0%
! ACATATATTGGAGGCGCATA+GGG - chr8_4:47415935-47415954 None:intergenic 40.0%
! AACATATATTGGAGGCGCAT+AGG - chr8_4:47415936-47415955 None:intergenic 40.0%
CAAGCACATCACAAGAAATG+TGG + chr8_4:47416052-47416071 Msa1329130:three_prime_UTR 40.0%
TCAACAGCAAATCCGAAGAT+AGG + chr8_4:47413749-47413768 Msa1329130:five_prime_UTR 40.0%
AATTGACTGACCAAGAACTC+CGG - chr8_4:47413806-47413825 None:intergenic 40.0%
! TGGAACTTTTTACGTGCAAG+AGG - chr8_4:47413912-47413931 None:intergenic 40.0%
GATGTGACTAGGTTTATCCT+TGG + chr8_4:47413982-47414001 Msa1329130:intron 40.0%
AAGAAGAAACATGCATCTGG+AGG + chr8_4:47414093-47414112 Msa1329130:CDS 40.0%
TGAAAGTGGTAGCATGTTTG+AGG + chr8_4:47414236-47414255 Msa1329130:CDS 40.0%
GAAAGTGGTAGCATGTTTGA+GGG + chr8_4:47414237-47414256 Msa1329130:CDS 40.0%
CAATGCACAAGAGAGTAGTT+GGG + chr8_4:47414302-47414321 Msa1329130:CDS 40.0%
AATGCACAAGAGAGTAGTTG+GGG + chr8_4:47414303-47414322 Msa1329130:CDS 40.0%
CAACACTATACAAATCCCCA+AGG - chr8_4:47414380-47414399 None:intergenic 40.0%
! GGGATTTGTATAGTGTTGCT+TGG + chr8_4:47414382-47414401 Msa1329130:CDS 40.0%
CTCGCTGCATAATACAAAAC+AGG - chr8_4:47414728-47414747 None:intergenic 40.0%
GCGAGTCACACAATCTAAAA+AGG + chr8_4:47414743-47414762 Msa1329130:intron 40.0%
GGTTCTCATGTGATGCAATA+TGG + chr8_4:47414937-47414956 Msa1329130:CDS 40.0%
! GATCCTAGTTTGTCATTGTG+AGG - chr8_4:47415033-47415052 None:intergenic 40.0%
! GAATCATTTAGATGGTAGCG+TGG + chr8_4:47415275-47415294 Msa1329130:CDS 40.0%
!! GTCTACCTCTTGTTGATGAT+TGG + chr8_4:47415367-47415386 Msa1329130:intron 40.0%
CATTCCCAATCATCAACAAG+AGG - chr8_4:47415375-47415394 None:intergenic 40.0%
! GGTTGTTTGAAACTCACTGT+GGG + chr8_4:47415644-47415663 Msa1329130:CDS 40.0%
TTTGCGAACATTTGCAACAG+CGG + chr8_4:47415703-47415722 Msa1329130:CDS 40.0%
! TTCTGAGGATTCTATGGAGA+AGG + chr8_4:47415729-47415748 Msa1329130:CDS 40.0%
GCACTATAACCTCTGTTTGA+TGG - chr8_4:47415799-47415818 None:intergenic 40.0%
ACTTTGTGTGGTACACTACA+TGG + chr8_4:47415822-47415841 Msa1329130:exon 40.0%
CTCGTCAATTGTGAAATTGC+TGG + chr8_4:47415878-47415897 Msa1329130:three_prime_UTR 40.0%
! ACATATATTGGAGGCGCATA+GGG - chr8_4:47415935-47415954 None:intergenic 40.0%
! AACATATATTGGAGGCGCAT+AGG - chr8_4:47415936-47415955 None:intergenic 40.0%
CAAGCACATCACAAGAAATG+TGG + chr8_4:47416052-47416071 Msa1329130:three_prime_UTR 40.0%
ATTGACTGACCAAGAACTCC+GGG - chr8_4:47413805-47413824 None:intergenic 45.0%
!! TTGGCTGTTATTTCTGCCCA+AGG - chr8_4:47414002-47414021 None:intergenic 45.0%
CCAACTACTCTCTTGTGCAT+TGG - chr8_4:47414304-47414323 None:intergenic 45.0%
CCAATGCACAAGAGAGTAGT+TGG + chr8_4:47414301-47414320 Msa1329130:CDS 45.0%
CAGAGTACATCACTTGCCTT+GGG + chr8_4:47414361-47414380 Msa1329130:CDS 45.0%
AGAGTACATCACTTGCCTTG+GGG + chr8_4:47414362-47414381 Msa1329130:CDS 45.0%
CGGTAGGTCTCTGAACTATT+TGG - chr8_4:47414642-47414661 None:intergenic 45.0%
!! CCAAGGTTTTGATCCTGCAA+CGG + chr8_4:47414996-47415015 Msa1329130:CDS 45.0%
GTTTGTCATTGTGAGGAGGA+AGG - chr8_4:47415026-47415045 None:intergenic 45.0%
! CCTAGTTTGTCATTGTGAGG+AGG - chr8_4:47415030-47415049 None:intergenic 45.0%
CCTCCTCACAATGACAAACT+AGG + chr8_4:47415027-47415046 Msa1329130:CDS 45.0%
! GATGGTAGCGTGGAATTGAT+TGG + chr8_4:47415285-47415304 Msa1329130:CDS 45.0%
TCATCAACAAGAGGTAGACC+AGG - chr8_4:47415366-47415385 None:intergenic 45.0%
! CCTGAAGGCATGTCTAGTAT+CGG + chr8_4:47415465-47415484 Msa1329130:intron 45.0%
! CGGTTGTTTGAAACTCACTG+TGG + chr8_4:47415643-47415662 Msa1329130:CDS 45.0%
! CGGTGTTTCTGAGGATTCTA+TGG + chr8_4:47415723-47415742 Msa1329130:CDS 45.0%
AAGGCATGTATAGCAGCATG+TGG + chr8_4:47415748-47415767 Msa1329130:CDS 45.0%
CATGTATAGCAGCATGTGGT+GGG + chr8_4:47415752-47415771 Msa1329130:CDS 45.0%
ATTGAGAGAATGGTTGGGTG+AGG + chr8_4:47416088-47416107 Msa1329130:three_prime_UTR 45.0%
ATTGACTGACCAAGAACTCC+GGG - chr8_4:47413805-47413824 None:intergenic 45.0%
!! TTGGCTGTTATTTCTGCCCA+AGG - chr8_4:47414002-47414021 None:intergenic 45.0%
CCAACTACTCTCTTGTGCAT+TGG - chr8_4:47414304-47414323 None:intergenic 45.0%
CCAATGCACAAGAGAGTAGT+TGG + chr8_4:47414301-47414320 Msa1329130:CDS 45.0%
CAGAGTACATCACTTGCCTT+GGG + chr8_4:47414361-47414380 Msa1329130:CDS 45.0%
AGAGTACATCACTTGCCTTG+GGG + chr8_4:47414362-47414381 Msa1329130:CDS 45.0%
CGGTAGGTCTCTGAACTATT+TGG - chr8_4:47414642-47414661 None:intergenic 45.0%
!! CCAAGGTTTTGATCCTGCAA+CGG + chr8_4:47414996-47415015 Msa1329130:CDS 45.0%
GTTTGTCATTGTGAGGAGGA+AGG - chr8_4:47415026-47415045 None:intergenic 45.0%
! CCTAGTTTGTCATTGTGAGG+AGG - chr8_4:47415030-47415049 None:intergenic 45.0%
CCTCCTCACAATGACAAACT+AGG + chr8_4:47415027-47415046 Msa1329130:CDS 45.0%
! GATGGTAGCGTGGAATTGAT+TGG + chr8_4:47415285-47415304 Msa1329130:CDS 45.0%
TCATCAACAAGAGGTAGACC+AGG - chr8_4:47415366-47415385 None:intergenic 45.0%
! CCTGAAGGCATGTCTAGTAT+CGG + chr8_4:47415465-47415484 Msa1329130:intron 45.0%
! CGGTTGTTTGAAACTCACTG+TGG + chr8_4:47415643-47415662 Msa1329130:CDS 45.0%
! CGGTGTTTCTGAGGATTCTA+TGG + chr8_4:47415723-47415742 Msa1329130:CDS 45.0%
AAGGCATGTATAGCAGCATG+TGG + chr8_4:47415748-47415767 Msa1329130:CDS 45.0%
CATGTATAGCAGCATGTGGT+GGG + chr8_4:47415752-47415771 Msa1329130:CDS 45.0%
ATTGAGAGAATGGTTGGGTG+AGG + chr8_4:47416088-47416107 Msa1329130:three_prime_UTR 45.0%
!!! TTTTAAATAATTTTGTAATT+TGG - chr8_4:47414518-47414537 None:intergenic 5.0%
!!! TTTTAAATAATTTTGTAATT+TGG - chr8_4:47414518-47414537 None:intergenic 5.0%
TTGACTGACCAAGAACTCCG+GGG - chr8_4:47413804-47413823 None:intergenic 50.0%
!! GTTTGAGGGTGTCATGCCAA+AGG + chr8_4:47414251-47414270 Msa1329130:CDS 50.0%
AGTTGGGGAACTTACTGTCC+TGG + chr8_4:47414318-47414337 Msa1329130:CDS 50.0%
! CAAGTGATGTACTCTGGAGG+TGG - chr8_4:47414357-47414376 None:intergenic 50.0%
AGGCAAGTGATGTACTCTGG+AGG - chr8_4:47414360-47414379 None:intergenic 50.0%
CCAAGGCAAGTGATGTACTC+TGG - chr8_4:47414363-47414382 None:intergenic 50.0%
CCAGAGTACATCACTTGCCT+TGG + chr8_4:47414360-47414379 Msa1329130:CDS 50.0%
!! GTGTTGCTTGGATGGAAGAC+AGG + chr8_4:47414394-47414413 Msa1329130:CDS 50.0%
CCGTTGCAGGATCAAAACCT+TGG - chr8_4:47414999-47415018 None:intergenic 50.0%
CCTTGAGAAGATTGCGGAGA+CGG + chr8_4:47415242-47415261 Msa1329130:CDS 50.0%
TTGCGGAGACGGTGAAACAT+AGG + chr8_4:47415253-47415272 Msa1329130:CDS 50.0%
CTACAGGCTCTTAGAGAACC+TGG + chr8_4:47415345-47415364 Msa1329130:CDS 50.0%
AGCACGACACTTTCACCTGA+AGG + chr8_4:47415450-47415469 Msa1329130:intron 50.0%
CCGATACTAGACATGCCTTC+AGG - chr8_4:47415468-47415487 None:intergenic 50.0%
TGTGGGTCACTGACACAGTA+TGG + chr8_4:47415661-47415680 Msa1329130:CDS 50.0%
GTGGGTCACTGACACAGTAT+GGG + chr8_4:47415662-47415681 Msa1329130:CDS 50.0%
! TTGCAACAGCGGTGTTTCTG+AGG + chr8_4:47415714-47415733 Msa1329130:CDS 50.0%
GCATGTATAGCAGCATGTGG+TGG + chr8_4:47415751-47415770 Msa1329130:CDS 50.0%
TTGACTGACCAAGAACTCCG+GGG - chr8_4:47413804-47413823 None:intergenic 50.0%
!! GTTTGAGGGTGTCATGCCAA+AGG + chr8_4:47414251-47414270 Msa1329130:CDS 50.0%
AGTTGGGGAACTTACTGTCC+TGG + chr8_4:47414318-47414337 Msa1329130:CDS 50.0%
! CAAGTGATGTACTCTGGAGG+TGG - chr8_4:47414357-47414376 None:intergenic 50.0%
AGGCAAGTGATGTACTCTGG+AGG - chr8_4:47414360-47414379 None:intergenic 50.0%
CCAAGGCAAGTGATGTACTC+TGG - chr8_4:47414363-47414382 None:intergenic 50.0%
CCAGAGTACATCACTTGCCT+TGG + chr8_4:47414360-47414379 Msa1329130:CDS 50.0%
!! GTGTTGCTTGGATGGAAGAC+AGG + chr8_4:47414394-47414413 Msa1329130:CDS 50.0%
CCGTTGCAGGATCAAAACCT+TGG - chr8_4:47414999-47415018 None:intergenic 50.0%
CCTTGAGAAGATTGCGGAGA+CGG + chr8_4:47415242-47415261 Msa1329130:CDS 50.0%
TTGCGGAGACGGTGAAACAT+AGG + chr8_4:47415253-47415272 Msa1329130:CDS 50.0%
CTACAGGCTCTTAGAGAACC+TGG + chr8_4:47415345-47415364 Msa1329130:CDS 50.0%
AGCACGACACTTTCACCTGA+AGG + chr8_4:47415450-47415469 Msa1329130:intron 50.0%
CCGATACTAGACATGCCTTC+AGG - chr8_4:47415468-47415487 None:intergenic 50.0%
TGTGGGTCACTGACACAGTA+TGG + chr8_4:47415661-47415680 Msa1329130:CDS 50.0%
GTGGGTCACTGACACAGTAT+GGG + chr8_4:47415662-47415681 Msa1329130:CDS 50.0%
! TTGCAACAGCGGTGTTTCTG+AGG + chr8_4:47415714-47415733 Msa1329130:CDS 50.0%
GCATGTATAGCAGCATGTGG+TGG + chr8_4:47415751-47415770 Msa1329130:CDS 50.0%
GGGAACTTACTGTCCTGGAG+TGG + chr8_4:47414323-47414342 Msa1329130:CDS 55.0%
! ATGTACTCTGGAGGTGGAGC+AGG - chr8_4:47414351-47414370 None:intergenic 55.0%
CCGTCTCCGCAATCTTCTCA+AGG - chr8_4:47415245-47415264 None:intergenic 55.0%
GGGAACTTACTGTCCTGGAG+TGG + chr8_4:47414323-47414342 Msa1329130:CDS 55.0%
! ATGTACTCTGGAGGTGGAGC+AGG - chr8_4:47414351-47414370 None:intergenic 55.0%
CCGTCTCCGCAATCTTCTCA+AGG - chr8_4:47415245-47415264 None:intergenic 55.0%
TACTCCGATCATGGAGGCCC+CGG + chr8_4:47413784-47413803 Msa1329130:five_prime_UTR 60.0%
AACTCCGGGGCCTCCATGAT+CGG - chr8_4:47413791-47413810 None:intergenic 60.0%
GGAGGAAGGTTCACCGTTGC+AGG - chr8_4:47415012-47415031 None:intergenic 60.0%
TACTCCGATCATGGAGGCCC+CGG + chr8_4:47413784-47413803 Msa1329130:five_prime_UTR 60.0%
AACTCCGGGGCCTCCATGAT+CGG - chr8_4:47413791-47413810 None:intergenic 60.0%
GGAGGAAGGTTCACCGTTGC+AGG - chr8_4:47415012-47415031 None:intergenic 60.0%
CATGGAGGCCCCGGAGTTCT+TGG + chr8_4:47413793-47413812 Msa1329130:five_prime_UTR 65.0%
GGTGGAGCAGGTTCCACTCC+AGG - chr8_4:47414339-47414358 None:intergenic 65.0%
CATGGAGGCCCCGGAGTTCT+TGG + chr8_4:47413793-47413812 Msa1329130:five_prime_UTR 65.0%
GGTGGAGCAGGTTCCACTCC+AGG - chr8_4:47414339-47414358 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 47413748 47416195 47413748 ID=Msa1329130;Name=Msa1329130
chr8_4 mRNA 47413748 47416195 47413748 ID=Msa1329130-mRNA-1;Parent=Msa1329130;Name=Msa1329130-mRNA-1;_AED=0.10;_eAED=0.10;_QI=69|0.83|0.85|1|0.83|0.85|7|373|300
chr8_4 exon 47413748 47413814 47413748 ID=Msa1329130-mRNA-1:exon:13617;Parent=Msa1329130-mRNA-1
chr8_4 exon 47414043 47414128 47414043 ID=Msa1329130-mRNA-1:exon:13618;Parent=Msa1329130-mRNA-1
chr8_4 exon 47414216 47414415 47414216 ID=Msa1329130-mRNA-1:exon:13619;Parent=Msa1329130-mRNA-1
chr8_4 exon 47414744 47414792 47414744 ID=Msa1329130-mRNA-1:exon:13620;Parent=Msa1329130-mRNA-1
chr8_4 exon 47414898 47415107 47414898 ID=Msa1329130-mRNA-1:exon:13621;Parent=Msa1329130-mRNA-1
chr8_4 exon 47415201 47415377 47415201 ID=Msa1329130-mRNA-1:exon:13622;Parent=Msa1329130-mRNA-1
chr8_4 exon 47415640 47416195 47415640 ID=Msa1329130-mRNA-1:exon:13623;Parent=Msa1329130-mRNA-1
chr8_4 five_prime_UTR 47413748 47413814 47413748 ID=Msa1329130-mRNA-1:five_prime_utr;Parent=Msa1329130-mRNA-1
chr8_4 five_prime_UTR 47414043 47414044 47414043 ID=Msa1329130-mRNA-1:five_prime_utr;Parent=Msa1329130-mRNA-1
chr8_4 CDS 47414045 47414128 47414045 ID=Msa1329130-mRNA-1:cds;Parent=Msa1329130-mRNA-1
chr8_4 CDS 47414216 47414415 47414216 ID=Msa1329130-mRNA-1:cds;Parent=Msa1329130-mRNA-1
chr8_4 CDS 47414744 47414792 47414744 ID=Msa1329130-mRNA-1:cds;Parent=Msa1329130-mRNA-1
chr8_4 CDS 47414898 47415107 47414898 ID=Msa1329130-mRNA-1:cds;Parent=Msa1329130-mRNA-1
chr8_4 CDS 47415201 47415377 47415201 ID=Msa1329130-mRNA-1:cds;Parent=Msa1329130-mRNA-1
chr8_4 CDS 47415640 47415822 47415640 ID=Msa1329130-mRNA-1:cds;Parent=Msa1329130-mRNA-1
chr8_4 three_prime_UTR 47415823 47416195 47415823 ID=Msa1329130-mRNA-1:three_prime_utr;Parent=Msa1329130-mRNA-1
Gene Sequence

>Msa1329130

ATGCCAAATATGCCGTATGTATATGCTATGGATTTTATTGATGTTTTGAAGAAGAAACATGCATCTGGAGGTTACAAAAAGATGGTTGTATACATTGAAGCTTGTGAAAGTGGTAGCATGTTTGAGGGTGTCATGCCAAAGGATCTTAATGTTTATGTGACAACTGCATCCAATGCACAAGAGAGTAGTTGGGGAACTTACTGTCCTGGAGTGGAACCTGCTCCACCTCCAGAGTACATCACTTGCCTTGGGGATTTGTATAGTGTTGCTTGGATGGAAGACAGCGAGTCACACAATCTAAAAAGGGAAACGGTGAAACAACAATACAAATCGGTTAAAGAACGGACTTCAAATTACAACAACTATGCATTAGGTTCTCATGTGATGCAATATGGTGATACCAACATTACAGATGAAAAGCTATATTTGTACCAAGGTTTTGATCCTGCAACGGTGAACCTTCCTCCTCACAATGACAAACTAGGATCTAAAATGGAAGTTGTAAACCAAAGAGATGCAGAGATTTTATTCATGTGGGAAATGTATAAGAGATTAGATCATCAAACGGAAAAGAAAAGAGAAATCCTTGAGAAGATTGCGGAGACGGTGAAACATAGGAATCATTTAGATGGTAGCGTGGAATTGATTGGAGTTTTACTGTTTGGTCCAACAAAAGGTTCTTCAGTTCTACAGGCTCTTAGAGAACCTGGTCTACCTCTTGTTCGGTTGTTTGAAACTCACTGTGGGTCACTGACACAGTATGGGATGAAACACATGCGAGCATTTGCGAACATTTGCAACAGCGGTGTTTCTGAGGATTCTATGGAGAAGGCATGTATAGCAGCATGTGGTGGGTATAATGTAGAGCTATTACATCCATCAAACAGAGGTTATAGTGCTTAA
Protein sequence

>Msa1329130

MPNMPYVYAMDFIDVLKKKHASGGYKKMVVYIEACESGSMFEGVMPKDLNVYVTTASNAQESSWGTYCPGVEPAPPPEYITCLGDLYSVAWMEDSESHNLKRETVKQQYKSVKERTSNYNNYALGSHVMQYGDTNITDEKLYLYQGFDPATVNLPPHNDKLGSKMEVVNQRDAEILFMWEMYKRLDHQTEKKREILEKIAETVKHRNHLDGSVELIGVLLFGPTKGSSVLQALREPGLPLVRLFETHCGSLTQYGMKHMRAFANICNSGVSEDSMEKACIAACGGYNVELLHPSNRGYSA*