Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0326260 | XP_024631713.2 | 86.322 | 541 | 50 | 2 | 1 | 541 | 1 | 517 | 0.0 | 935 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0326260 | sp|Q9LMA1|FMO1_ARATH | 39.483 | 542 | 283 | 12 | 4 | 535 | 12 | 518 | 8.24e-127 | 384 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0206080 | Msa0326260 | 0.836463 | 9.218891e-57 | -8.615850e-47 |
| Msa0206120 | Msa0326260 | 0.883315 | 4.979988e-71 | -8.615850e-47 |
| Msa0206130 | Msa0326260 | 0.832268 | 1.041328e-55 | -8.615850e-47 |
| Msa0206160 | Msa0326260 | 0.878732 | 2.213206e-69 | -8.615850e-47 |
| Msa0206180 | Msa0326260 | 0.858987 | 5.648076e-63 | -8.615850e-47 |
| Msa0206190 | Msa0326260 | 0.862753 | 4.054812e-64 | -8.615850e-47 |
| Msa0249270 | Msa0326260 | 0.845117 | 4.959239e-59 | -8.615850e-47 |
| Msa0326260 | Msa0326270 | 0.886970 | 2.149969e-72 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0326260 | MtrunA17_Chr2g0304721 | 86.322 | 541 | 50 | 2 | 1 | 541 | 1 | 517 | 0.0 | 935 |
| Msa0326260 | MtrunA17_Chr2g0305211 | 74.081 | 544 | 114 | 3 | 1 | 541 | 1 | 520 | 0.0 | 833 |
| Msa0326260 | MtrunA17_Chr2g0305231 | 74.081 | 544 | 114 | 3 | 1 | 541 | 1 | 520 | 0.0 | 833 |
| Msa0326260 | MtrunA17_Chr2g0304651 | 72.794 | 544 | 119 | 4 | 1 | 541 | 1 | 518 | 0.0 | 801 |
| Msa0326260 | MtrunA17_Chr2g0301661 | 37.989 | 537 | 298 | 10 | 4 | 535 | 13 | 519 | 8.16e-115 | 350 |
| Msa0326260 | MtrunA17_Chr2g0301471 | 38.175 | 537 | 297 | 10 | 4 | 535 | 13 | 519 | 3.27e-111 | 341 |
| Msa0326260 | MtrunA17_Chr4g0070101 | 38.878 | 517 | 275 | 13 | 27 | 535 | 36 | 519 | 7.87e-111 | 340 |
| Msa0326260 | MtrunA17_Chr4g0070111 | 40.780 | 282 | 162 | 4 | 257 | 536 | 1 | 279 | 2.01e-68 | 222 |
| Msa0326260 | MtrunA17_Chr2g0286701 | 33.977 | 259 | 142 | 6 | 1 | 257 | 10 | 241 | 6.88e-42 | 152 |
| Msa0326260 | MtrunA17_Chr4g0070121 | 36.161 | 224 | 118 | 3 | 27 | 249 | 36 | 235 | 2.46e-36 | 135 |
| Msa0326260 | MtrunA17_Chr2g0286681 | 39.316 | 117 | 69 | 2 | 296 | 412 | 4 | 118 | 7.29e-24 | 96.7 |
| Msa0326260 | MtrunA17_Chr2g0286671 | 39.604 | 101 | 60 | 1 | 435 | 535 | 1 | 100 | 1.89e-18 | 80.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0326260 | AT1G19250.1 | 39.483 | 542 | 283 | 12 | 4 | 535 | 12 | 518 | 8.38e-128 | 384 |
| Msa0326260 | AT5G45180.1 | 35.878 | 524 | 249 | 15 | 4 | 516 | 12 | 459 | 5.35e-100 | 310 |
Find 119 sgRNAs with CRISPR-Local
Find 354 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTCCAAGATTTCAACATTT+TGG | 0.077736 | 2_4:-35832401 | Msa0326260:CDS |
| ATGTTATAACATATTGTTTA+TGG | 0.095585 | 2_4:-35830439 | Msa0326260:three_prime_UTR |
| TTGAACTGTCAATGTAATTT+TGG | 0.125056 | 2_4:+35831824 | None:intergenic |
| AATAACTACATCTGTTTCTA+AGG | 0.224263 | 2_4:+35831906 | None:intergenic |
| CCCATGGAAAATCTGAAAAT+TGG | 0.228440 | 2_4:+35836719 | None:intergenic |
| TGGAAAAGGATGTTAAATTA+TGG | 0.238102 | 2_4:-35830914 | Msa0326260:CDS |
| ACACTTCCTTCTTTGCCTTT+TGG | 0.256770 | 2_4:-35832314 | Msa0326260:CDS |
| AGGTAAGGTTATGCATTCTA+TGG | 0.272924 | 2_4:-35832728 | Msa0326260:CDS |
| GTATAATAATAGGCATAAAT+TGG | 0.292162 | 2_4:-35834130 | Msa0326260:CDS |
| GAAATATCTGCATGTCAAAT+TGG | 0.294249 | 2_4:-35832042 | Msa0326260:CDS |
| GACAGCCACTCATAAAATTC+AGG | 0.302533 | 2_4:+35834040 | None:intergenic |
| TACCTTTGTTGAGAAATTCT+TGG | 0.304695 | 2_4:+35836471 | None:intergenic |
| AGTGGTAATGGCAGTAGTTT+TGG | 0.313462 | 2_4:-35836529 | Msa0326260:CDS |
| ATATGAAGTCATGGGAATTA+TGG | 0.316758 | 2_4:-35836552 | Msa0326260:CDS |
| GCTGAGCTATTTGAACCATA+TGG | 0.318612 | 2_4:-35830762 | Msa0326260:CDS |
| TTAGTTTATTGACTCGTCTA+TGG | 0.318799 | 2_4:-35830476 | Msa0326260:three_prime_UTR |
| ATCCCAGCTGGCTCCGCTCC+TGG | 0.323411 | 2_4:-35834075 | Msa0326260:CDS |
| ACCATTTGCATTTGCGCATT+CGG | 0.341818 | 2_4:+35832609 | None:intergenic |
| AAAATTACATTGACAGTTCA+AGG | 0.349499 | 2_4:-35831822 | Msa0326260:CDS |
| TGCCCAAAATGTTGAAATCT+TGG | 0.351554 | 2_4:+35832398 | None:intergenic |
| CAATATATAGCTTTATCCTT+TGG | 0.355651 | 2_4:-35830570 | Msa0326260:three_prime_UTR |
| TCTTGAAGAAAACTATGATT+AGG | 0.356221 | 2_4:+35832063 | None:intergenic |
| ATTCTTGCCACAGGATATAA+AGG | 0.366577 | 2_4:-35831886 | Msa0326260:CDS |
| AACAAGACCATTATAATCAT+TGG | 0.370353 | 2_4:+35830737 | None:intergenic |
| AATAAGAGAGTTACAGTAGT+AGG | 0.371604 | 2_4:-35832661 | Msa0326260:CDS |
| AAGCCAGGAGCGGAGCCAGC+TGG | 0.374597 | 2_4:+35834072 | None:intergenic |
| TGCAAATATGCTCTACAGAT+TGG | 0.376558 | 2_4:-35836838 | Msa0326260:CDS |
| TAGCACACCTCTAAACAAAA+AGG | 0.384966 | 2_4:+35830694 | None:intergenic |
| TCTACAACTTGCTTATTACT+TGG | 0.392477 | 2_4:+35836673 | None:intergenic |
| GGGAGGAACTCAGGAATGTT+TGG | 0.394469 | 2_4:+35832775 | None:intergenic |
| GGAAAAGGATGTTAAATTAT+GGG | 0.406921 | 2_4:-35830913 | Msa0326260:CDS |
| TTGGAATTGAATCTTATGTA+AGG | 0.408337 | 2_4:+35836613 | None:intergenic |
| TTATAATCATTGGGCCCATA+TGG | 0.409896 | 2_4:+35830747 | None:intergenic |
| CTGAGCTATTTGAACCATAT+GGG | 0.415677 | 2_4:-35830761 | Msa0326260:CDS |
| AAGTTGCCACTGAAGAAGTA+TGG | 0.417922 | 2_4:-35832093 | Msa0326260:CDS |
| TTGTTGAAACATATCTGAAA+TGG | 0.425780 | 2_4:-35832116 | Msa0326260:CDS |
| ATAATCTATATCAATGACTT+TGG | 0.427553 | 2_4:+35836594 | None:intergenic |
| GCAAAGAAGGAAGTGTTCTC+CGG | 0.428738 | 2_4:+35832321 | None:intergenic |
| AGCTTTAGCTTCTGCAAAGA+AGG | 0.430511 | 2_4:-35831955 | Msa0326260:CDS |
| GCATTGTTACTTGTGGCATA+TGG | 0.438868 | 2_4:-35830845 | Msa0326260:CDS |
| GAATCTTATGTAAGGAATGA+TGG | 0.442345 | 2_4:+35836621 | None:intergenic |
| GCGGAGCCAGCTGGGATTGA+GGG | 0.444017 | 2_4:+35834081 | None:intergenic |
| ATGATGGTGTTGGAGGACTA+TGG | 0.447006 | 2_4:-35836789 | Msa0326260:CDS |
| AGCGGAGCCAGCTGGGATTG+AGG | 0.449307 | 2_4:+35834080 | None:intergenic |
| TTCAGGTTGGGCGCAAAGCC+AGG | 0.451678 | 2_4:+35834057 | None:intergenic |
| GTTCAAGGATTTCTCTCTAC+AGG | 0.451911 | 2_4:-35831807 | Msa0326260:intron |
| TATGGGCCCAATGATTATAA+TGG | 0.453124 | 2_4:-35830744 | Msa0326260:CDS |
| AGCCAGGAGCGGAGCCAGCT+GGG | 0.453403 | 2_4:+35834073 | None:intergenic |
| ATCCTATCATTGCCAATTGT+GGG | 0.453863 | 2_4:+35831036 | None:intergenic |
| GGCCACTTTACTTTCACCAT+TGG | 0.455226 | 2_4:-35832293 | Msa0326260:intron |
| TGTAATATGCCATGTTCCCT+TGG | 0.457974 | 2_4:+35836504 | None:intergenic |
| ACATCCTCGCATCCCACAAT+TGG | 0.460278 | 2_4:-35831048 | Msa0326260:CDS |
| TTCTATGGATTACTCTGCCT+TGG | 0.462649 | 2_4:-35832713 | Msa0326260:CDS |
| TTGTGATTTCTTTATCTCGA+TGG | 0.463038 | 2_4:+35831978 | None:intergenic |
| AACATTCCTGAGTTCCTCCC+TGG | 0.466304 | 2_4:-35832772 | Msa0326260:CDS |
| CCTGAGTTCCTCCCTGGAAA+AGG | 0.469202 | 2_4:-35832766 | Msa0326260:CDS |
| GACGAGTCAATAAACTAAGA+AGG | 0.469643 | 2_4:+35830481 | None:intergenic |
| TTTATGGTAATGTTTAATGA+TGG | 0.480787 | 2_4:-35830423 | Msa0326260:three_prime_UTR |
| TTGGTCACCTTTATATCCTG+TGG | 0.488352 | 2_4:+35831879 | None:intergenic |
| ACAAGACCATTATAATCATT+GGG | 0.490199 | 2_4:+35830738 | None:intergenic |
| AGAGTTGCAATTGTTGGTGC+AGG | 0.491948 | 2_4:-35836880 | Msa0326260:CDS |
| TATCCTATCATTGCCAATTG+TGG | 0.493186 | 2_4:+35831035 | None:intergenic |
| TGGAAAATTCCAAGATGTGC+AGG | 0.495311 | 2_4:-35834110 | Msa0326260:CDS |
| TCATCAGCTTCATATACAAC+AGG | 0.497177 | 2_4:+35836808 | None:intergenic |
| AAGTGGCCAAAAGGCAAAGA+AGG | 0.500298 | 2_4:+35832308 | None:intergenic |
| GTCATTGATATAGATTATGT+TGG | 0.502491 | 2_4:-35836589 | Msa0326260:CDS |
| ATCCCACAATTGGCAATGAT+AGG | 0.504586 | 2_4:-35831038 | Msa0326260:CDS |
| AGAGTTACAGTAGTAGGCTC+AGG | 0.504894 | 2_4:-35832655 | Msa0326260:CDS |
| CTAGAAAATGTGCTAACCAT+TGG | 0.509768 | 2_4:+35830970 | None:intergenic |
| AAAAGACCCTTCTTTCTCCT+CGG | 0.510420 | 2_4:+35830786 | None:intergenic |
| CACTTCAGCGGAATACATGT+TGG | 0.514505 | 2_4:-35830658 | Msa0326260:three_prime_UTR |
| TGGGAATTATGGAGTGGTAA+TGG | 0.517223 | 2_4:-35836541 | Msa0326260:CDS |
| GTGAAAGTAAAGTGGCCAAA+AGG | 0.517743 | 2_4:+35832299 | None:intergenic |
| GCCGAATGCGCAAATGCAAA+TGG | 0.517814 | 2_4:-35832610 | Msa0326260:intron |
| TGCACACCCTCAATCCCAGC+TGG | 0.518670 | 2_4:-35834087 | Msa0326260:CDS |
| ATGTAATCCGAGGAGAAAGA+AGG | 0.524125 | 2_4:-35830793 | Msa0326260:CDS |
| GATGTAGTTATTCTTGCCAC+AGG | 0.531258 | 2_4:-35831895 | Msa0326260:CDS |
| CTGATGAAGATATGAAGTCA+TGG | 0.535713 | 2_4:-35836561 | Msa0326260:CDS |
| CAAAGAAGGAAGTGTTCTCC+GGG | 0.539434 | 2_4:+35832322 | None:intergenic |
| GTTCTATTTATAATCGTGCA+AGG | 0.542558 | 2_4:+35832436 | None:intergenic |
| TATGAAGCTGATGATGGTGT+TGG | 0.543117 | 2_4:-35836799 | Msa0326260:CDS |
| CCACTCATAAAATTCAGGTT+GGG | 0.543863 | 2_4:+35834045 | None:intergenic |
| ATAACTACATCTGTTTCTAA+GGG | 0.546830 | 2_4:+35831907 | None:intergenic |
| AGCAGCAGTTTCTTTGTCCA+AGG | 0.547408 | 2_4:+35832696 | None:intergenic |
| TAGTATAAAAGAGATGGAAA+AGG | 0.548970 | 2_4:-35830928 | Msa0326260:CDS |
| ATTGCCTAGTATAAAAGAGA+TGG | 0.549328 | 2_4:-35830934 | Msa0326260:CDS |
| GCCACTCATAAAATTCAGGT+TGG | 0.549434 | 2_4:+35834044 | None:intergenic |
| TGGAAAATCTGAAAATTGGT+AGG | 0.552489 | 2_4:+35836723 | None:intergenic |
| GGGTGTGCACCTGCACATCT+TGG | 0.558784 | 2_4:+35834101 | None:intergenic |
| ATACATGTTGGAGGGGTGCA+TGG | 0.562978 | 2_4:-35830646 | Msa0326260:three_prime_UTR |
| GTTGTATATGAAGCTGATGA+TGG | 0.564559 | 2_4:-35836805 | Msa0326260:CDS |
| GAAGCTGATGATGGTGTTGG+AGG | 0.565452 | 2_4:-35836796 | Msa0326260:CDS |
| TACCAATGGTGAAAGTAAAG+TGG | 0.578127 | 2_4:+35832291 | None:intergenic |
| TACCAAGAATTTCTCAACAA+AGG | 0.578314 | 2_4:-35836473 | Msa0326260:intron |
| ACGAGTCAATAAACTAAGAA+GGG | 0.580449 | 2_4:+35830482 | None:intergenic |
| TGATGAAGATATGAAGTCAT+GGG | 0.593792 | 2_4:-35836560 | Msa0326260:CDS |
| TTCAGCGGAATACATGTTGG+AGG | 0.599189 | 2_4:-35830655 | Msa0326260:three_prime_UTR |
| GGCAATGATAGGATATGCTG+AGG | 0.603017 | 2_4:-35831027 | Msa0326260:CDS |
| TGTAATCCGAGGAGAAAGAA+GGG | 0.603199 | 2_4:-35830792 | Msa0326260:CDS |
| AGATCATGCATTGTTACTTG+TGG | 0.603581 | 2_4:-35830852 | Msa0326260:CDS |
| TCAGCGGAATACATGTTGGA+GGG | 0.605726 | 2_4:-35830654 | Msa0326260:three_prime_UTR |
| GTTGGGCGCAAAGCCAGGAG+CGG | 0.609320 | 2_4:+35834062 | None:intergenic |
| TTCTATTTATAATCGTGCAA+GGG | 0.618260 | 2_4:+35832437 | None:intergenic |
| AATAATGACAAATAAACCAA+AGG | 0.621111 | 2_4:+35830554 | None:intergenic |
| GAGCATATTTGCAAGCAAGT+AGG | 0.621227 | 2_4:+35836848 | None:intergenic |
| ATTGTTGGTGCAGGAATCAG+TGG | 0.624826 | 2_4:-35836871 | Msa0326260:CDS |
| TATGTTATAACATAAACAGA+AGG | 0.627898 | 2_4:+35830449 | None:intergenic |
| TCTCACAATTCTCACTTCAG+CGG | 0.629098 | 2_4:-35830670 | Msa0326260:three_prime_UTR |
| ACTAGTCCATACTTCTTCAG+TGG | 0.645916 | 2_4:+35832087 | None:intergenic |
| TAGAGAAAGCACAACACTCG+TGG | 0.658750 | 2_4:-35830616 | Msa0326260:three_prime_UTR |
| CTAATGAAATGAGATGCCAA+TGG | 0.660576 | 2_4:-35830986 | Msa0326260:CDS |
| GAGACATGAAATGTAATCCG+AGG | 0.662039 | 2_4:-35830803 | Msa0326260:CDS |
| TTATAAATAGAACTTCACAC+TGG | 0.667245 | 2_4:-35832426 | Msa0326260:CDS |
| AAGTCATGGGAATTATGGAG+TGG | 0.671476 | 2_4:-35836547 | Msa0326260:CDS |
| CAGCGGAATACATGTTGGAG+GGG | 0.673086 | 2_4:-35830653 | Msa0326260:three_prime_UTR |
| ATTGCCAATTGTGGGATGCG+AGG | 0.681590 | 2_4:+35831044 | None:intergenic |
| GGGAACATGGCATATTACAG+TGG | 0.699925 | 2_4:-35836500 | Msa0326260:CDS |
| GCAATGATAGGATATGCTGA+GGG | 0.702690 | 2_4:-35831026 | Msa0326260:CDS |
| ATGGTGTTGGAGGACTATGG+AGG | 0.798552 | 2_4:-35836786 | Msa0326260:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATATATATATATATA+TGG | - | chr2_4:35833899-35833918 | Msa0326260:intron | 0.0% |
| !! | ATATATATATATATATATAT+GGG | - | chr2_4:35833900-35833919 | Msa0326260:intron | 0.0% |
| !! | TATATTTGCATATTAAAAAA+TGG | + | chr2_4:35831741-35831760 | None:intergenic | 10.0% |
| !!! | TTATTTTAGTTAACATTAAT+TGG | - | chr2_4:35831978-35831997 | Msa0326260:CDS | 10.0% |
| !!! | TATTTTAGTTAACATTAATT+GGG | - | chr2_4:35831979-35831998 | Msa0326260:CDS | 10.0% |
| !!! | TGAATATTGATATTTTTTTA+AGG | - | chr2_4:35833859-35833878 | Msa0326260:intron | 10.0% |
| !! | TCTTACAAAAATATATAAAT+TGG | + | chr2_4:35835092-35835111 | None:intergenic | 10.0% |
| !! | ATCTTTCAAATATATATATA+GGG | + | chr2_4:35835807-35835826 | None:intergenic | 10.0% |
| !! | AATCTTTCAAATATATATAT+AGG | + | chr2_4:35835808-35835827 | None:intergenic | 10.0% |
| !! | ATATATATTTGAAAGATTAA+CGG | - | chr2_4:35835810-35835829 | Msa0326260:intron | 10.0% |
| !!! | TTCATATTTCATTTTCTTTT+TGG | - | chr2_4:35830878-35830897 | Msa0326260:CDS | 15.0% |
| !! | TGATTAAAATTGTGTATTTA+TGG | - | chr2_4:35831186-35831205 | Msa0326260:intron | 15.0% |
| !! | TGATTAAAATTGTGTATTTA+TGG | - | chr2_4:35831186-35831205 | Msa0326260:intron | 15.0% |
| !! | TTAGTTGAATTATAAGATTA+AGG | - | chr2_4:35832359-35832378 | Msa0326260:CDS | 15.0% |
| !! | TACAAAAGTTAGTATATTAA+TGG | + | chr2_4:35832419-35832438 | None:intergenic | 15.0% |
| !! | AAATTTAACTCATTAATTGT+CGG | - | chr2_4:35832548-35832567 | Msa0326260:intron | 15.0% |
| !! | AAAAATCAATGTGATTATTT+GGG | + | chr2_4:35832692-35832711 | None:intergenic | 15.0% |
| !! | TAAAAATCAATGTGATTATT+TGG | + | chr2_4:35832693-35832712 | None:intergenic | 15.0% |
| !! | TGAAAAATCAGTATAATAAT+AGG | - | chr2_4:35833156-35833175 | Msa0326260:intron | 15.0% |
| !! | AATTTAGGCTTATTAAAATA+TGG | + | chr2_4:35833497-35833516 | None:intergenic | 15.0% |
| !!! | AAATATATGTTTTGAAAAAG+TGG | + | chr2_4:35833588-35833607 | None:intergenic | 15.0% |
| !! | ATTATATTGTTAGTTATCTT+TGG | - | chr2_4:35833610-35833629 | Msa0326260:intron | 15.0% |
| !!! | ACTAAGGATTTTTTTTTTAA+AGG | - | chr2_4:35833687-35833706 | Msa0326260:intron | 15.0% |
| !! | TACACTAATATCTATATATA+TGG | - | chr2_4:35833797-35833816 | Msa0326260:intron | 15.0% |
| !!! | AAAAAAAATCTTGATAATTG+TGG | - | chr2_4:35834005-35834024 | Msa0326260:intron | 15.0% |
| !! | AATTATTGTTATATTGCAAA+GGG | + | chr2_4:35834448-35834467 | None:intergenic | 15.0% |
| !! | AAATTATTGTTATATTGCAA+AGG | + | chr2_4:35834449-35834468 | None:intergenic | 15.0% |
| !!! | TATTTTTGATATGTATTTGT+AGG | + | chr2_4:35835573-35835592 | None:intergenic | 15.0% |
| !!! | AATATTCCAGAAAATTTTAT+TGG | - | chr2_4:35836421-35836440 | Msa0326260:intron | 15.0% |
| !! | ATGTTATAACATATTGTTTA+TGG | - | chr2_4:35836857-35836876 | Msa0326260:CDS | 15.0% |
| !! | ATAATCTATATCAATGACTT+TGG | + | chr2_4:35830705-35830724 | None:intergenic | 20.0% |
| !! | TTTCATAATTACAAATGTGT+TGG | - | chr2_4:35830905-35830924 | Msa0326260:CDS | 20.0% |
| !! | AGAGATAAATAAAGGAAATA+TGG | - | chr2_4:35830974-35830993 | Msa0326260:CDS | 20.0% |
| !!! | TGTTACGAGATTTTTTTTTT+AGG | + | chr2_4:35831145-35831164 | None:intergenic | 20.0% |
| !! | AATAAATAAATCACCTATGT+GGG | + | chr2_4:35831288-35831307 | None:intergenic | 20.0% |
| !! | AAATAAATAAATCACCTATG+TGG | + | chr2_4:35831289-35831308 | None:intergenic | 20.0% |
| !!! | GTTACGAGATTTTTTTTTTT+AGG | + | chr2_4:35831455-35831474 | None:intergenic | 20.0% |
| !! | AAACAAAAGAAATCAATCAT+AGG | - | chr2_4:35831766-35831785 | Msa0326260:intron | 20.0% |
| !! | TTGATAAAGTATAACACTAA+CGG | + | chr2_4:35831904-35831923 | None:intergenic | 20.0% |
| !! | GAATTATAAGATTAAGGTTA+AGG | - | chr2_4:35832365-35832384 | Msa0326260:CDS | 20.0% |
| !!! | GTGTTGTTATTTAATTTAGT+AGG | + | chr2_4:35833025-35833044 | None:intergenic | 20.0% |
| !!! | TCAATTGACTTTTGATTATT+AGG | + | chr2_4:35833047-35833066 | None:intergenic | 20.0% |
| !! | GTATAATAATAGGCATAAAT+TGG | - | chr2_4:35833166-35833185 | Msa0326260:intron | 20.0% |
| !! | AAGCATATCACAATTTATTA+AGG | - | chr2_4:35833352-35833371 | Msa0326260:intron | 20.0% |
| !! | TAAGACAAAATTAACATTAG+AGG | + | chr2_4:35833837-35833856 | None:intergenic | 20.0% |
| !! | TGAAAATTGAATATATTCTG+CGG | + | chr2_4:35834293-35834312 | None:intergenic | 20.0% |
| !!! | TTCTTTTACTTTGTCAAAAA+AGG | + | chr2_4:35835294-35835313 | None:intergenic | 20.0% |
| !!! | TTTTTTGACAAAGTAAAAGA+AGG | - | chr2_4:35835293-35835312 | Msa0326260:intron | 20.0% |
| !!! | TGAATATGCTTTTAAGTTTT+TGG | + | chr2_4:35835439-35835458 | None:intergenic | 20.0% |
| !!! | TCAATGTAATTTTGGAAAAT+TGG | + | chr2_4:35835467-35835486 | None:intergenic | 20.0% |
| !!! | CTATTTTCTTATGTATGATT+TGG | - | chr2_4:35835546-35835565 | Msa0326260:intron | 20.0% |
| !!! | TTTGAAATATTAATAGAGTC+AGG | + | chr2_4:35835899-35835918 | None:intergenic | 20.0% |
| !! | TAAAATATTAATAGAGTCAG+AGG | - | chr2_4:35836118-35836137 | Msa0326260:intron | 20.0% |
| !! | AATAATGACAAATAAACCAA+AGG | + | chr2_4:35836745-35836764 | None:intergenic | 20.0% |
| !! | TATGTTATAACATAAACAGA+AGG | + | chr2_4:35836850-35836869 | None:intergenic | 20.0% |
| !!! | TTTATGGTAATGTTTAATGA+TGG | - | chr2_4:35836873-35836892 | Msa0326260:CDS | 20.0% |
| !!! | TTTAATGATGGATTTTTGTT+TGG | - | chr2_4:35836885-35836904 | Msa0326260:CDS | 20.0% |
| ! | TTGGAATTGAATCTTATGTA+AGG | + | chr2_4:35830686-35830705 | None:intergenic | 25.0% |
| ! | GTCATTGATATAGATTATGT+TGG | - | chr2_4:35830707-35830726 | Msa0326260:three_prime_UTR | 25.0% |
| ! | GAAACGTTAGAGATAAATAA+AGG | - | chr2_4:35830966-35830985 | Msa0326260:CDS | 25.0% |
| !! | TCTCGAGTAAAACTATATTT+TGG | + | chr2_4:35831038-35831057 | None:intergenic | 25.0% |
| ! | ATAAATAAATCACCTATGTG+GGG | + | chr2_4:35831287-35831306 | None:intergenic | 25.0% |
| ! | TCAAAAATCAAGATACGATA+CGG | - | chr2_4:35831661-35831680 | Msa0326260:intron | 25.0% |
| ! | ACATTAATTGGGAAATATTG+AGG | - | chr2_4:35831990-35832009 | Msa0326260:CDS | 25.0% |
| ! | ACAGGTGATAATAAAACAAA+GGG | - | chr2_4:35832207-35832226 | Msa0326260:intron | 25.0% |
| ! | TTATGGTATTACAGTCATAA+TGG | + | chr2_4:35832290-35832309 | None:intergenic | 25.0% |
| ! | AGAAAATGACATAGAAATGA+AGG | + | chr2_4:35832579-35832598 | None:intergenic | 25.0% |
| ! | ATCATAGTCTTTATAGACAA+AGG | - | chr2_4:35832814-35832833 | Msa0326260:intron | 25.0% |
| ! | ATTGTATGCTACTAAAACAA+AGG | + | chr2_4:35832882-35832901 | None:intergenic | 25.0% |
| !! | ACTCTCATAAGTCTTTTTAA+AGG | - | chr2_4:35833418-35833437 | Msa0326260:intron | 25.0% |
| !!! | TAAGTCTTTTTAAAGGTGTT+TGG | - | chr2_4:35833425-35833444 | Msa0326260:intron | 25.0% |
| !!! | AAGTCTTTTTAAAGGTGTTT+GGG | - | chr2_4:35833426-35833445 | Msa0326260:intron | 25.0% |
| ! | ATATTGTTAGTTATCTTTGG+CGG | - | chr2_4:35833613-35833632 | Msa0326260:intron | 25.0% |
| !!! | AAAATTAACTTGTCTTTCTC+TGG | - | chr2_4:35833764-35833783 | Msa0326260:intron | 25.0% |
| !! | CTTACATAAATTGAAGTGTT+TGG | + | chr2_4:35834103-35834122 | None:intergenic | 25.0% |
| ! | CTTGATAAGCTATTTATGTT+TGG | + | chr2_4:35834145-35834164 | None:intergenic | 25.0% |
| ! | ATATAAGCTGTTTATCCAAA+CGG | - | chr2_4:35834221-35834240 | Msa0326260:intron | 25.0% |
| ! | AAAATTGAATATATTCTGCG+GGG | + | chr2_4:35834291-35834310 | None:intergenic | 25.0% |
| ! | GAAAATTGAATATATTCTGC+GGG | + | chr2_4:35834292-35834311 | None:intergenic | 25.0% |
| ! | AAGTTAAAGCAAAGTTTGTA+AGG | + | chr2_4:35834326-35834345 | None:intergenic | 25.0% |
| ! | AAGATATTAACATGCAATCA+CGG | - | chr2_4:35834410-35834429 | Msa0326260:intron | 25.0% |
| !!! | TAGTTTGTTATTCTTTGCAT+TGG | - | chr2_4:35834482-35834501 | Msa0326260:intron | 25.0% |
| !!! | AGTTTGTTATTCTTTGCATT+GGG | - | chr2_4:35834483-35834502 | Msa0326260:intron | 25.0% |
| ! | TTCAATCCATTAATTTCTAC+AGG | - | chr2_4:35834827-35834846 | Msa0326260:intron | 25.0% |
| ! | TTCTATTTATAATCGTGCAA+GGG | + | chr2_4:35834862-35834881 | None:intergenic | 25.0% |
| ! | TTATAAATAGAACTTCACAC+TGG | - | chr2_4:35834870-35834889 | Msa0326260:intron | 25.0% |
| !! | CAATCTAAATTTTCAGAGAT+GGG | - | chr2_4:35835145-35835164 | Msa0326260:intron | 25.0% |
| !! | AATCTAAATTTTCAGAGATG+GGG | - | chr2_4:35835146-35835165 | Msa0326260:intron | 25.0% |
| ! | TTGTTGAAACATATCTGAAA+TGG | - | chr2_4:35835180-35835199 | Msa0326260:intron | 25.0% |
| ! | TCTTGAAGAAAACTATGATT+AGG | + | chr2_4:35835236-35835255 | None:intergenic | 25.0% |
| !!! | ATAACTACATCTGTTTCTAA+GGG | + | chr2_4:35835392-35835411 | None:intergenic | 25.0% |
| !!! | AATAACTACATCTGTTTCTA+AGG | + | chr2_4:35835393-35835412 | None:intergenic | 25.0% |
| !! | TTGAACTGTCAATGTAATTT+TGG | + | chr2_4:35835475-35835494 | None:intergenic | 25.0% |
| ! | AAAATTACATTGACAGTTCA+AGG | - | chr2_4:35835474-35835493 | Msa0326260:intron | 25.0% |
| ! | AAATTCTCTATACTAATCCA+TGG | - | chr2_4:35836203-35836222 | Msa0326260:intron | 25.0% |
| !! | TTTTCCATCTCTTTTATACT+AGG | + | chr2_4:35836369-35836388 | None:intergenic | 25.0% |
| ! | TAGTATAAAAGAGATGGAAA+AGG | - | chr2_4:35836368-35836387 | Msa0326260:intron | 25.0% |
| ! | TGGAAAAGGATGTTAAATTA+TGG | - | chr2_4:35836382-35836401 | Msa0326260:intron | 25.0% |
| ! | GGAAAAGGATGTTAAATTAT+GGG | - | chr2_4:35836383-35836402 | Msa0326260:intron | 25.0% |
| !! | TGATCTCCAATAAAATTTTC+TGG | + | chr2_4:35836430-35836449 | None:intergenic | 25.0% |
| ! | ACAAGACCATTATAATCATT+GGG | + | chr2_4:35836561-35836580 | None:intergenic | 25.0% |
| ! | AACAAGACCATTATAATCAT+TGG | + | chr2_4:35836562-35836581 | None:intergenic | 25.0% |
| !!! | TTATGATCCTTTTTGTTTAG+AGG | - | chr2_4:35836595-35836614 | Msa0326260:CDS | 25.0% |
| !!! | CAATATATAGCTTTATCCTT+TGG | - | chr2_4:35836726-35836745 | Msa0326260:CDS | 25.0% |
| GAAAAAAGAGTTGCAATTGT+TGG | - | chr2_4:35830410-35830429 | Msa0326260:three_prime_UTR | 30.0% | |
| !! | AAAATTGGTAGGCTTGTTTT+CGG | + | chr2_4:35830565-35830584 | None:intergenic | 30.0% |
| TGGAAAATCTGAAAATTGGT+AGG | + | chr2_4:35830576-35830595 | None:intergenic | 30.0% | |
| ! | ACCAATTTTCAGATTTTCCA+TGG | - | chr2_4:35830576-35830595 | Msa0326260:three_prime_UTR | 30.0% |
| ! | CCAATTTTCAGATTTTCCAT+GGG | - | chr2_4:35830577-35830596 | Msa0326260:three_prime_UTR | 30.0% |
| ! | TCTACAACTTGCTTATTACT+TGG | + | chr2_4:35830626-35830645 | None:intergenic | 30.0% |
| GAATCTTATGTAAGGAATGA+TGG | + | chr2_4:35830678-35830697 | None:intergenic | 30.0% | |
| TGATGAAGATATGAAGTCAT+GGG | - | chr2_4:35830736-35830755 | Msa0326260:CDS | 30.0% | |
| ATATGAAGTCATGGGAATTA+TGG | - | chr2_4:35830744-35830763 | Msa0326260:CDS | 30.0% | |
| TACCAAGAATTTCTCAACAA+AGG | - | chr2_4:35830823-35830842 | Msa0326260:CDS | 30.0% | |
| TACCTTTGTTGAGAAATTCT+TGG | + | chr2_4:35830828-35830847 | None:intergenic | 30.0% | |
| !!! | TTGGATTAGTGCTTCTTTTT+TGG | + | chr2_4:35831928-35831947 | None:intergenic | 30.0% |
| !!! | AGTACTGATGTGTTCTTTTT+TGG | + | chr2_4:35831947-35831966 | None:intergenic | 30.0% |
| TATCGGTGCATGATAATTAT+CGG | - | chr2_4:35832017-35832036 | Msa0326260:CDS | 30.0% | |
| !!! | GTCATCCCATTTTTAAGTAT+CGG | - | chr2_4:35832178-35832197 | Msa0326260:intron | 30.0% |
| !!! | TCATCCCATTTTTAAGTATC+GGG | - | chr2_4:35832179-35832198 | Msa0326260:intron | 30.0% |
| CACAGGTGATAATAAAACAA+AGG | - | chr2_4:35832206-35832225 | Msa0326260:intron | 30.0% | |
| GTGATAATAAAACAAAGGGA+TGG | - | chr2_4:35832211-35832230 | Msa0326260:intron | 30.0% | |
| ATAGACAAAGGAAAAAGATC+TGG | - | chr2_4:35832826-35832845 | Msa0326260:intron | 30.0% | |
| ! | TCTAACTTCTCCTTTTCTTT+TGG | + | chr2_4:35832852-35832871 | None:intergenic | 30.0% |
| ! | ACATCAATTGGACATGTTTT+TGG | - | chr2_4:35832973-35832992 | Msa0326260:intron | 30.0% |
| TAGTAGGATCGTAATTTAGT+AGG | + | chr2_4:35833009-35833028 | None:intergenic | 30.0% | |
| TCAAAATAAGCCAATCCAAA+GGG | + | chr2_4:35833380-35833399 | None:intergenic | 30.0% | |
| ATCAAAATAAGCCAATCCAA+AGG | + | chr2_4:35833381-35833400 | None:intergenic | 30.0% | |
| !!! | TGGCTTATTTTGATCTTATG+TGG | - | chr2_4:35833387-35833406 | Msa0326260:intron | 30.0% |
| !!! | GGCTTATTTTGATCTTATGT+GGG | - | chr2_4:35833388-35833407 | Msa0326260:intron | 30.0% |
| TATAGATGCTTATGGCATTA+AGG | + | chr2_4:35834204-35834223 | None:intergenic | 30.0% | |
| ACAGCTTATATAGATGCTTA+TGG | + | chr2_4:35834212-35834231 | None:intergenic | 30.0% | |
| TATAAGCTGTTTATCCAAAC+GGG | - | chr2_4:35834222-35834241 | Msa0326260:intron | 30.0% | |
| CAAAGTTTGTAAGGACATAT+TGG | + | chr2_4:35834317-35834336 | None:intergenic | 30.0% | |
| AATAAGAGAGTTACAGTAGT+AGG | - | chr2_4:35834635-35834654 | Msa0326260:intron | 30.0% | |
| GTGATTCCTGTAGAAATTAA+TGG | + | chr2_4:35834836-35834855 | None:intergenic | 30.0% | |
| GTTCTATTTATAATCGTGCA+AGG | + | chr2_4:35834863-35834882 | None:intergenic | 30.0% | |
| ! | TCTCCAAGATTTCAACATTT+TGG | - | chr2_4:35834895-35834914 | Msa0326260:intron | 30.0% |
| ! | CTCCAAGATTTCAACATTTT+GGG | - | chr2_4:35834896-35834915 | Msa0326260:intron | 30.0% |
| GTATCTTACATTCTTACCAA+TGG | + | chr2_4:35835022-35835041 | None:intergenic | 30.0% | |
| ! | GCAATCTAAATTTTCAGAGA+TGG | - | chr2_4:35835144-35835163 | Msa0326260:intron | 30.0% |
| GAAATATCTGCATGTCAAAT+TGG | - | chr2_4:35835254-35835273 | Msa0326260:intron | 30.0% | |
| CTTTGTCAAAAAAGGAATCA+GGG | + | chr2_4:35835286-35835305 | None:intergenic | 30.0% | |
| ACTTTGTCAAAAAAGGAATC+AGG | + | chr2_4:35835287-35835306 | None:intergenic | 30.0% | |
| TTGTGATTTCTTTATCTCGA+TGG | + | chr2_4:35835321-35835340 | None:intergenic | 30.0% | |
| GCAAAGTTACAACTAAAAAG+TGG | + | chr2_4:35835747-35835766 | None:intergenic | 30.0% | |
| CTAAAAGACACCTTCATAAA+AGG | - | chr2_4:35835766-35835785 | Msa0326260:intron | 30.0% | |
| AATTTGAGAGTGACTTACAA+AGG | + | chr2_4:35835872-35835891 | None:intergenic | 30.0% | |
| !! | TATGTTTTTGTCACATGACA+AGG | - | chr2_4:35835965-35835984 | Msa0326260:intron | 30.0% |
| ! | TGAGAAACTTTTGACAAAGA+CGG | - | chr2_4:35835996-35836015 | Msa0326260:intron | 30.0% |
| ! | AGAAACTTTTGACAAAGACA+AGG | - | chr2_4:35836088-35836107 | Msa0326260:intron | 30.0% |
| ATTGCCTAGTATAAAAGAGA+TGG | - | chr2_4:35836362-35836381 | Msa0326260:intron | 30.0% | |
| ACGAGTCAATAAACTAAGAA+GGG | + | chr2_4:35836817-35836836 | None:intergenic | 30.0% | |
| !! | TTAGTTTATTGACTCGTCTA+TGG | - | chr2_4:35836820-35836839 | Msa0326260:CDS | 30.0% |
| TGCAAATATGCTCTACAGAT+TGG | - | chr2_4:35830458-35830477 | Msa0326260:three_prime_UTR | 35.0% | |
| TCATCAGCTTCATATACAAC+AGG | + | chr2_4:35830491-35830510 | None:intergenic | 35.0% | |
| GTTGTATATGAAGCTGATGA+TGG | - | chr2_4:35830491-35830510 | Msa0326260:three_prime_UTR | 35.0% | |
| CCCATGGAAAATCTGAAAAT+TGG | + | chr2_4:35830580-35830599 | None:intergenic | 35.0% | |
| ! | TCTTTTACAGAAGAATCCCA+TGG | + | chr2_4:35830596-35830615 | None:intergenic | 35.0% |
| CTGATGAAGATATGAAGTCA+TGG | - | chr2_4:35830735-35830754 | Msa0326260:CDS | 35.0% | |
| TCACAGATTATCACCTATGT+GGG | + | chr2_4:35831601-35831620 | None:intergenic | 35.0% | |
| TTCACAGATTATCACCTATG+TGG | + | chr2_4:35831602-35831621 | None:intergenic | 35.0% | |
| !! | ATTTTACCGTATCGACGTAT+CGG | + | chr2_4:35831640-35831659 | None:intergenic | 35.0% |
| TAATTGGGAAATATTGAGGC+AGG | - | chr2_4:35831994-35832013 | Msa0326260:CDS | 35.0% | |
| GATACTCTCCTGATATGTAT+CGG | - | chr2_4:35832039-35832058 | Msa0326260:CDS | 35.0% | |
| ATACTCTCCTGATATGTATC+GGG | - | chr2_4:35832040-35832059 | Msa0326260:CDS | 35.0% | |
| ! | TGATATGTATCGGGAAGTAT+CGG | - | chr2_4:35832049-35832068 | Msa0326260:CDS | 35.0% |
| !!! | CATCCCATTTTTAAGTATCG+GGG | - | chr2_4:35832180-35832199 | Msa0326260:intron | 35.0% |
| AAGCCCCGATACTTAAAAAT+GGG | + | chr2_4:35832186-35832205 | None:intergenic | 35.0% | |
| CTGTGGACGATAAATTAATG+TGG | + | chr2_4:35832459-35832478 | None:intergenic | 35.0% | |
| AAAGATCTGGCCAAAAGAAA+AGG | - | chr2_4:35832839-35832858 | Msa0326260:intron | 35.0% | |
| AGAAAAGGAGAAGTTAGAGA+AGG | - | chr2_4:35832854-35832873 | Msa0326260:intron | 35.0% | |
| !! | TTAGACATGCATTGATTCGT+TGG | - | chr2_4:35832924-35832943 | Msa0326260:intron | 35.0% |
| !! | TAGACATGCATTGATTCGTT+GGG | - | chr2_4:35832925-35832944 | Msa0326260:intron | 35.0% |
| AAGACAGTGCAAATAGCAAT+AGG | - | chr2_4:35833070-35833089 | Msa0326260:intron | 35.0% | |
| ! | CCACTCATAAAATTCAGGTT+GGG | + | chr2_4:35833254-35833273 | None:intergenic | 35.0% |
| AAAATAAGCCAATCCAAAGG+GGG | + | chr2_4:35833378-35833397 | None:intergenic | 35.0% | |
| CAAAATAAGCCAATCCAAAG+GGG | + | chr2_4:35833379-35833398 | None:intergenic | 35.0% | |
| ! | TAAATTTTCAGCTTACCCTC+CGG | - | chr2_4:35833511-35833530 | Msa0326260:intron | 35.0% |
| TAAAGTAACACGCGTAACTA+AGG | - | chr2_4:35833671-35833690 | Msa0326260:intron | 35.0% | |
| ATAAGCTGTTTATCCAAACG+GGG | - | chr2_4:35834223-35834242 | Msa0326260:intron | 35.0% | |
| CTTTGCATTGGGAAATATAG+TGG | - | chr2_4:35834494-35834513 | Msa0326260:intron | 35.0% | |
| CCTTACCTGTAAAAACTTCT+GGG | + | chr2_4:35834556-35834575 | None:intergenic | 35.0% | |
| ACCTTACCTGTAAAAACTTC+TGG | + | chr2_4:35834557-35834576 | None:intergenic | 35.0% | |
| AGGTAAGGTTATGCATTCTA+TGG | - | chr2_4:35834568-35834587 | Msa0326260:intron | 35.0% | |
| TGCCCAAAATGTTGAAATCT+TGG | + | chr2_4:35834901-35834920 | None:intergenic | 35.0% | |
| TACCAATGGTGAAAGTAAAG+TGG | + | chr2_4:35835008-35835027 | None:intergenic | 35.0% | |
| ATTCTTGCCACAGGATATAA+AGG | - | chr2_4:35835410-35835429 | Msa0326260:intron | 35.0% | |
| TTGCTAAAAGACACCTTCAT+GGG | + | chr2_4:35835763-35835782 | None:intergenic | 35.0% | |
| ATTGCTAAAAGACACCTTCA+TGG | + | chr2_4:35835703-35835722 | None:intergenic | 35.0% | |
| ! | CTAGAAGACACCTTTTATGA+AGG | + | chr2_4:35835779-35835798 | None:intergenic | 35.0% |
| ! | GGTGGTTTACTCAAGTATTT+TGG | + | chr2_4:35835836-35835855 | None:intergenic | 35.0% |
| GATGTATTATTTGCCTGTAG+TGG | + | chr2_4:35836233-35836252 | None:intergenic | 35.0% | |
| ATCCTATCATTGCCAATTGT+GGG | + | chr2_4:35836263-35836282 | None:intergenic | 35.0% | |
| TATCCTATCATTGCCAATTG+TGG | + | chr2_4:35836264-35836283 | None:intergenic | 35.0% | |
| CTAATGAAATGAGATGCCAA+TGG | - | chr2_4:35836310-35836329 | Msa0326260:intron | 35.0% | |
| CTAGAAAATGTGCTAACCAT+TGG | + | chr2_4:35836329-35836348 | None:intergenic | 35.0% | |
| ! | TGGTTAGCACATTTTCTAGA+TGG | - | chr2_4:35836330-35836349 | Msa0326260:intron | 35.0% |
| ! | AGATCATGCATTGTTACTTG+TGG | - | chr2_4:35836444-35836463 | Msa0326260:intron | 35.0% |
| CTGAGCTATTTGAACCATAT+GGG | - | chr2_4:35836535-35836554 | Msa0326260:CDS | 35.0% | |
| TTATAATCATTGGGCCCATA+TGG | + | chr2_4:35836552-35836571 | None:intergenic | 35.0% | |
| TATGGGCCCAATGATTATAA+TGG | - | chr2_4:35836552-35836571 | Msa0326260:CDS | 35.0% | |
| TAGCACACCTCTAAACAAAA+AGG | + | chr2_4:35836605-35836624 | None:intergenic | 35.0% | |
| GACGAGTCAATAAACTAAGA+AGG | + | chr2_4:35836818-35836837 | None:intergenic | 35.0% | |
| GAGCATATTTGCAAGCAAGT+AGG | + | chr2_4:35830451-35830470 | None:intergenic | 40.0% | |
| !! | TATGAAGCTGATGATGGTGT+TGG | - | chr2_4:35830497-35830516 | Msa0326260:three_prime_UTR | 40.0% |
| AAGTCATGGGAATTATGGAG+TGG | - | chr2_4:35830749-35830768 | Msa0326260:CDS | 40.0% | |
| TGGGAATTATGGAGTGGTAA+TGG | - | chr2_4:35830755-35830774 | Msa0326260:CDS | 40.0% | |
| !!! | AGTGGTAATGGCAGTAGTTT+TGG | - | chr2_4:35830767-35830786 | Msa0326260:CDS | 40.0% |
| TGTAATATGCCATGTTCCCT+TGG | + | chr2_4:35830795-35830814 | None:intergenic | 40.0% | |
| CACAGATTATCACCTATGTG+GGG | + | chr2_4:35831600-35831619 | None:intergenic | 40.0% | |
| ! | CGGATATAGTATAGCACTGA+TGG | + | chr2_4:35831884-35831903 | None:intergenic | 40.0% |
| GGAAATATTGAGGCAGGTAT+CGG | - | chr2_4:35832000-35832019 | Msa0326260:CDS | 40.0% | |
| GATACTTCCCGATACATATC+AGG | + | chr2_4:35832050-35832069 | None:intergenic | 40.0% | |
| GATACTCTCCTGATACGTAT+CGG | - | chr2_4:35832108-35832127 | Msa0326260:CDS | 40.0% | |
| ATACTCTCCTGATACGTATC+GGG | - | chr2_4:35832109-35832128 | Msa0326260:CDS | 40.0% | |
| ! | TGATACGTATCGGGAAGTAT+CGG | - | chr2_4:35832118-35832137 | Msa0326260:CDS | 40.0% |
| GAAGCCCCGATACTTAAAAA+TGG | + | chr2_4:35832187-35832206 | None:intergenic | 40.0% | |
| !! | AGACATGCATTGATTCGTTG+GGG | - | chr2_4:35832926-35832945 | Msa0326260:intron | 40.0% |
| GTGGTTTAATCTACCTTGGT+TGG | - | chr2_4:35832949-35832968 | Msa0326260:intron | 40.0% | |
| TGGAAAATTCCAAGATGTGC+AGG | - | chr2_4:35833186-35833205 | Msa0326260:intron | 40.0% | |
| ! | CCCAACCTGAATTTTATGAG+TGG | - | chr2_4:35833251-35833270 | Msa0326260:intron | 40.0% |
| GCCACTCATAAAATTCAGGT+TGG | + | chr2_4:35833255-35833274 | None:intergenic | 40.0% | |
| GACAGCCACTCATAAAATTC+AGG | + | chr2_4:35833259-35833278 | None:intergenic | 40.0% | |
| CAATTTATTAAGGCCCCCTT+TGG | - | chr2_4:35833362-35833381 | Msa0326260:intron | 40.0% | |
| GGAGGGTAAGCTGAAAATTT+AGG | + | chr2_4:35833512-35833531 | None:intergenic | 40.0% | |
| TCATAAGCTCCTTGTTAAGC+CGG | + | chr2_4:35833533-35833552 | None:intergenic | 40.0% | |
| GAAGTTGAGTTTGCACTCTT+AGG | + | chr2_4:35834249-35834268 | None:intergenic | 40.0% | |
| ! | AAAGGCCCAGAAGTTTTTAC+AGG | - | chr2_4:35834548-35834567 | Msa0326260:intron | 40.0% |
| ! | CCCAGAAGTTTTTACAGGTA+AGG | - | chr2_4:35834553-35834572 | Msa0326260:intron | 40.0% |
| ! | TTCTATGGATTACTCTGCCT+TGG | - | chr2_4:35834583-35834602 | Msa0326260:intron | 40.0% |
| ACCATTTGCATTTGCGCATT+CGG | + | chr2_4:35834690-35834709 | None:intergenic | 40.0% | |
| !!! | GAACTTTTAGTTCACAAGCC+CGG | - | chr2_4:35834956-35834975 | Msa0326260:intron | 40.0% |
| ! | ACACTTCCTTCTTTGCCTTT+TGG | - | chr2_4:35834982-35835001 | Msa0326260:intron | 40.0% |
| GTGAAAGTAAAGTGGCCAAA+AGG | + | chr2_4:35835000-35835019 | None:intergenic | 40.0% | |
| AAGTTGCCACTGAAGAAGTA+TGG | - | chr2_4:35835203-35835222 | Msa0326260:intron | 40.0% | |
| ACTAGTCCATACTTCTTCAG+TGG | + | chr2_4:35835212-35835231 | None:intergenic | 40.0% | |
| ! | AGCTTTAGCTTCTGCAAAGA+AGG | - | chr2_4:35835341-35835360 | Msa0326260:intron | 40.0% |
| GATGTAGTTATTCTTGCCAC+AGG | - | chr2_4:35835401-35835420 | Msa0326260:intron | 40.0% | |
| TTGGTCACCTTTATATCCTG+TGG | + | chr2_4:35835420-35835439 | None:intergenic | 40.0% | |
| GTTCAAGGATTTCTCTCTAC+AGG | - | chr2_4:35835489-35835508 | Msa0326260:intron | 40.0% | |
| ! | TTTTAGCAATCCACACCTCA+AGG | - | chr2_4:35835713-35835732 | Msa0326260:intron | 40.0% |
| AAAGTGGAAATCACACCTTG+AGG | + | chr2_4:35835731-35835750 | None:intergenic | 40.0% | |
| TACAAAGGCAGGGATCAAAT+TGG | + | chr2_4:35835857-35835876 | None:intergenic | 40.0% | |
| TAGAAAGACCGAGATCAGTT+TGG | - | chr2_4:35836158-35836177 | Msa0326260:intron | 40.0% | |
| GTAAACCACCAAACTGATCT+CGG | + | chr2_4:35836169-35836188 | None:intergenic | 40.0% | |
| AATCCATGGTAAACCACTAC+AGG | - | chr2_4:35836217-35836236 | Msa0326260:intron | 40.0% | |
| ATCCCACAATTGGCAATGAT+AGG | - | chr2_4:35836258-35836277 | Msa0326260:intron | 40.0% | |
| GCAATGATAGGATATGCTGA+GGG | - | chr2_4:35836270-35836289 | Msa0326260:intron | 40.0% | |
| ! | GCATTGTTACTTGTGGCATA+TGG | - | chr2_4:35836451-35836470 | Msa0326260:intron | 40.0% |
| GAGACATGAAATGTAATCCG+AGG | - | chr2_4:35836493-35836512 | Msa0326260:CDS | 40.0% | |
| ATGTAATCCGAGGAGAAAGA+AGG | - | chr2_4:35836503-35836522 | Msa0326260:CDS | 40.0% | |
| TGTAATCCGAGGAGAAAGAA+GGG | - | chr2_4:35836504-35836523 | Msa0326260:CDS | 40.0% | |
| AAAAGACCCTTCTTTCTCCT+CGG | + | chr2_4:35836513-35836532 | None:intergenic | 40.0% | |
| GCTGAGCTATTTGAACCATA+TGG | - | chr2_4:35836534-35836553 | Msa0326260:CDS | 40.0% | |
| TCTCACAATTCTCACTTCAG+CGG | - | chr2_4:35836626-35836645 | Msa0326260:CDS | 40.0% | |
| AGAGTTGCAATTGTTGGTGC+AGG | - | chr2_4:35830416-35830435 | Msa0326260:three_prime_UTR | 45.0% | |
| ATTGTTGGTGCAGGAATCAG+TGG | - | chr2_4:35830425-35830444 | Msa0326260:three_prime_UTR | 45.0% | |
| ! | ATGATGGTGTTGGAGGACTA+TGG | - | chr2_4:35830507-35830526 | Msa0326260:three_prime_UTR | 45.0% |
| !! | GGTAGGCTTGTTTTCGGTTT+TGG | + | chr2_4:35830559-35830578 | None:intergenic | 45.0% |
| !!! | TGGCAGTAGTTTTGGATCCA+AGG | - | chr2_4:35830775-35830794 | Msa0326260:CDS | 45.0% |
| !!! | GGCAGTAGTTTTGGATCCAA+GGG | - | chr2_4:35830776-35830795 | Msa0326260:CDS | 45.0% |
| !! | GTTTTGGATCCAAGGGAACA+TGG | - | chr2_4:35830783-35830802 | Msa0326260:CDS | 45.0% |
| GGGAACATGGCATATTACAG+TGG | - | chr2_4:35830796-35830815 | Msa0326260:CDS | 45.0% | |
| ! | AGCAACCGAGTTTTCCCTTT+CGG | - | chr2_4:35831255-35831274 | Msa0326260:intron | 45.0% |
| ! | AGCAACCGAGTTTTCCCTTT+CGG | - | chr2_4:35831255-35831274 | Msa0326260:intron | 45.0% |
| !! | GCACTGATGGTGCTCTTTTT+GGG | + | chr2_4:35831871-35831890 | None:intergenic | 45.0% |
| !!! | AGCACTGATGGTGCTCTTTT+TGG | + | chr2_4:35831872-35831891 | None:intergenic | 45.0% |
| GATACTTCCCGATACGTATC+AGG | + | chr2_4:35832119-35832138 | None:intergenic | 45.0% | |
| !! | GATACGTATCGGGAAGTATC+GGG | - | chr2_4:35832119-35832138 | Msa0326260:CDS | 45.0% |
| GTATCAGTGCAGGATAAGCA+GGG | - | chr2_4:35832145-35832164 | Msa0326260:intron | 45.0% | |
| TATCAGTGCAGGATAAGCAG+GGG | - | chr2_4:35832146-35832165 | Msa0326260:intron | 45.0% | |
| !! | TTTAAGTATCGGGGCTTCAC+AGG | - | chr2_4:35832189-35832208 | Msa0326260:intron | 45.0% |
| TCGTCCACAGATGTTCAACA+TGG | - | chr2_4:35832469-35832488 | Msa0326260:intron | 45.0% | |
| CACACCATGTTGAACATCTG+TGG | + | chr2_4:35832476-35832495 | None:intergenic | 45.0% | |
| CACAGATGTTCAACATGGTG+TGG | - | chr2_4:35832474-35832493 | Msa0326260:intron | 45.0% | |
| ACGCAATAGCATTCTGAGTC+AGG | - | chr2_4:35832511-35832530 | Msa0326260:intron | 45.0% | |
| !! | GACATGCATTGATTCGTTGG+GGG | - | chr2_4:35832927-35832946 | Msa0326260:intron | 45.0% |
| ACCTTGGTTGGCACATCAAT+TGG | - | chr2_4:35832961-35832980 | Msa0326260:intron | 45.0% | |
| TCCAATTGATGTGCCAACCA+AGG | + | chr2_4:35832965-35832984 | None:intergenic | 45.0% | |
| ATGTCCGTATCATAGTCTGC+TGG | - | chr2_4:35833103-35833122 | Msa0326260:intron | 45.0% | |
| TGCACCAGCAGACTATGATA+CGG | + | chr2_4:35833110-35833129 | None:intergenic | 45.0% | |
| TCATAGTCTGCTGGTGCAAA+AGG | - | chr2_4:35833112-35833131 | Msa0326260:intron | 45.0% | |
| AACCAACTTGACACTCGTAC+AGG | - | chr2_4:35833301-35833320 | Msa0326260:intron | 45.0% | |
| TATTAAGGCCCCCTTTGGAT+TGG | - | chr2_4:35833367-35833386 | Msa0326260:intron | 45.0% | |
| GATCTAGAGAGAATCGAAGG+AGG | + | chr2_4:35833566-35833585 | None:intergenic | 45.0% | |
| GTGGATCTAGAGAGAATCGA+AGG | + | chr2_4:35833569-35833588 | None:intergenic | 45.0% | |
| ! | AAACTTCTGGGCCTTTTCCA+GGG | + | chr2_4:35834544-35834563 | None:intergenic | 45.0% |
| ! | AAAACTTCTGGGCCTTTTCC+AGG | + | chr2_4:35834545-35834564 | None:intergenic | 45.0% |
| AGCAGCAGTTTCTTTGTCCA+AGG | + | chr2_4:35834603-35834622 | None:intergenic | 45.0% | |
| AGAGTTACAGTAGTAGGCTC+AGG | - | chr2_4:35834641-35834660 | Msa0326260:intron | 45.0% | |
| !! | CAAAGAAGGAAGTGTTCTCC+GGG | + | chr2_4:35834977-35834996 | None:intergenic | 45.0% |
| !! | GCAAAGAAGGAAGTGTTCTC+CGG | + | chr2_4:35834978-35834997 | None:intergenic | 45.0% |
| AAGTGGCCAAAAGGCAAAGA+AGG | + | chr2_4:35834991-35835010 | None:intergenic | 45.0% | |
| ! | GGCCACTTTACTTTCACCAT+TGG | - | chr2_4:35835003-35835022 | Msa0326260:intron | 45.0% |
| CTAAAAGACACCTTCATGGG+TGG | + | chr2_4:35835699-35835718 | None:intergenic | 45.0% | |
| AAAGGCAGGGATCAAATTGG+TGG | + | chr2_4:35835854-35835873 | None:intergenic | 45.0% | |
| GAGAGTGACTTACAAAGGCA+GGG | + | chr2_4:35835867-35835886 | None:intergenic | 45.0% | |
| TGAGAGTGACTTACAAAGGC+AGG | + | chr2_4:35835868-35835887 | None:intergenic | 45.0% | |
| AAAGACCGAGATCAGTTTGG+TGG | - | chr2_4:35836161-35836180 | Msa0326260:intron | 45.0% | |
| TTGCCTGTAGTGGTTTACCA+TGG | + | chr2_4:35836223-35836242 | None:intergenic | 45.0% | |
| GGCAATGATAGGATATGCTG+AGG | - | chr2_4:35836269-35836288 | Msa0326260:intron | 45.0% | |
| CACTTCAGCGGAATACATGT+TGG | - | chr2_4:35836638-35836657 | Msa0326260:CDS | 45.0% | |
| TTCAGCGGAATACATGTTGG+AGG | - | chr2_4:35836641-35836660 | Msa0326260:CDS | 45.0% | |
| TCAGCGGAATACATGTTGGA+GGG | - | chr2_4:35836642-35836661 | Msa0326260:CDS | 45.0% | |
| ! | TAGAGAAAGCACAACACTCG+TGG | - | chr2_4:35836680-35836699 | Msa0326260:CDS | 45.0% |
| !! | AAAAAATAAAATTTAATCTT+CGG | - | chr2_4:35832086-35832105 | Msa0326260:CDS | 5.0% |
| !!! | TAAAGTAAAAATTTAATTTA+TGG | + | chr2_4:35832307-35832326 | None:intergenic | 5.0% |
| !! | GAAGCTGATGATGGTGTTGG+AGG | - | chr2_4:35830500-35830519 | Msa0326260:three_prime_UTR | 50.0% |
| ! | ATGGTGTTGGAGGACTATGG+AGG | - | chr2_4:35830510-35830529 | Msa0326260:three_prime_UTR | 50.0% |
| ! | AACCGAGTTTTCCCTTTCGG+TGG | - | chr2_4:35831258-35831277 | Msa0326260:intron | 50.0% |
| CACCACCGAAAGGGAAAACT+CGG | + | chr2_4:35831263-35831282 | None:intergenic | 50.0% | |
| ! | AACCGAGTTTTCCCTTTCGG+TGG | - | chr2_4:35831258-35831277 | Msa0326260:intron | 50.0% |
| CACCACCGAAAGGGAAAACT+CGG | + | chr2_4:35831263-35831282 | None:intergenic | 50.0% | |
| ACGTATCGGAGCAGTATCGT+GGG | + | chr2_4:35831626-35831645 | None:intergenic | 50.0% | |
| ACTGCTCCGATACGTCGATA+CGG | - | chr2_4:35831631-35831650 | Msa0326260:intron | 50.0% | |
| GGTATCAGTGCAGGATAAGC+AGG | - | chr2_4:35832144-35832163 | Msa0326260:intron | 50.0% | |
| !! | ATGCATTGATTCGTTGGGGG+TGG | - | chr2_4:35832930-35832949 | Msa0326260:intron | 50.0% |
| GGGGGTGGTTTAATCTACCT+TGG | - | chr2_4:35832945-35832964 | Msa0326260:intron | 50.0% | |
| GACCTGTACGAGTGTCAAGT+TGG | + | chr2_4:35833306-35833325 | None:intergenic | 50.0% | |
| AAGCTCCTTGTTAAGCCGGA+GGG | + | chr2_4:35833529-35833548 | None:intergenic | 50.0% | |
| TAAGCTCCTTGTTAAGCCGG+AGG | + | chr2_4:35833530-35833549 | None:intergenic | 50.0% | |
| GGGAGGAACTCAGGAATGTT+TGG | + | chr2_4:35834524-35834543 | None:intergenic | 50.0% | |
| AACATTCCTGAGTTCCTCCC+TGG | - | chr2_4:35834524-35834543 | Msa0326260:intron | 50.0% | |
| GCCGAATGCGCAAATGCAAA+TGG | - | chr2_4:35834686-35834705 | Msa0326260:intron | 50.0% | |
| TTGCTAGAAGCCACCCATGA+AGG | - | chr2_4:35835686-35835705 | Msa0326260:intron | 50.0% | |
| GGAAATCACACCTTGAGGTG+TGG | + | chr2_4:35835726-35835745 | None:intergenic | 50.0% | |
| ACATCCTCGCATCCCACAAT+TGG | - | chr2_4:35836248-35836267 | Msa0326260:intron | 50.0% | |
| ATTGCCAATTGTGGGATGCG+AGG | + | chr2_4:35836255-35836274 | None:intergenic | 50.0% | |
| CAGCGGAATACATGTTGGAG+GGG | - | chr2_4:35836643-35836662 | Msa0326260:CDS | 50.0% | |
| ! | ATACATGTTGGAGGGGTGCA+TGG | - | chr2_4:35836650-35836669 | Msa0326260:CDS | 50.0% |
| ATGTGGGGACACCACCGAAA+GGG | + | chr2_4:35831272-35831291 | None:intergenic | 55.0% | |
| TATGTGGGGACACCACCGAA+AGG | + | chr2_4:35831273-35831292 | None:intergenic | 55.0% | |
| TTTCGGTGGTGTCCCCACAT+AGG | - | chr2_4:35831272-35831291 | Msa0326260:intron | 55.0% | |
| ATGTGGGGACACCACCGAAA+GGG | + | chr2_4:35831272-35831291 | None:intergenic | 55.0% | |
| TATGTGGGGACACCACCGAA+AGG | + | chr2_4:35831273-35831292 | None:intergenic | 55.0% | |
| TTTCGGTGGTGTCCCCACAT+AGG | - | chr2_4:35831272-35831291 | Msa0326260:intron | 55.0% | |
| GACGTATCGGAGCAGTATCG+TGG | + | chr2_4:35831627-35831646 | None:intergenic | 55.0% | |
| TATCGGGCAGGTATCAGTGC+AGG | - | chr2_4:35832135-35832154 | Msa0326260:CDS | 55.0% | |
| GCTTACCCTCCGGCTTAACA+AGG | - | chr2_4:35833521-35833540 | Msa0326260:intron | 55.0% | |
| TTGCACTCTTAGGCCCCGTT+TGG | + | chr2_4:35834239-35834258 | None:intergenic | 55.0% | |
| ! | CCTTTTCCAGGGAGGAACTC+AGG | + | chr2_4:35834533-35834552 | None:intergenic | 55.0% |
| CCTGAGTTCCTCCCTGGAAA+AGG | - | chr2_4:35834530-35834549 | Msa0326260:intron | 55.0% | |
| !! | CGTATCGGGAAGTATCGGGC+AGG | - | chr2_4:35832123-35832142 | Msa0326260:CDS | 60.0% |
| GGGTGTGCACCTGCACATCT+TGG | + | chr2_4:35833198-35833217 | None:intergenic | 60.0% | |
| TGCACACCCTCAATCCCAGC+TGG | - | chr2_4:35833209-35833228 | Msa0326260:intron | 60.0% | |
| !! | TTCAGGTTGGGCGCAAAGCC+AGG | + | chr2_4:35833242-35833261 | None:intergenic | 60.0% |
| ! | CTTCTGGGCCTTTTCCAGGG+AGG | + | chr2_4:35834541-35834560 | None:intergenic | 60.0% |
| GCGGAGCCAGCTGGGATTGA+GGG | + | chr2_4:35833218-35833237 | None:intergenic | 65.0% | |
| AGCGGAGCCAGCTGGGATTG+AGG | + | chr2_4:35833219-35833238 | None:intergenic | 65.0% | |
| GTTGGGCGCAAAGCCAGGAG+CGG | + | chr2_4:35833237-35833256 | None:intergenic | 65.0% | |
| ! | ATCCCAGCTGGCTCCGCTCC+TGG | - | chr2_4:35833221-35833240 | Msa0326260:intron | 70.0% |
| AGCCAGGAGCGGAGCCAGCT+GGG | + | chr2_4:35833226-35833245 | None:intergenic | 70.0% | |
| AAGCCAGGAGCGGAGCCAGC+TGG | + | chr2_4:35833227-35833246 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 35830407 | 35836911 | 35830407 | ID=Msa0326260;Name=Msa0326260 |
| chr2_4 | mRNA | 35830407 | 35836911 | 35830407 | ID=Msa0326260-mRNA-1;Parent=Msa0326260;Name=Msa0326260-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0.6|0.5|0.83|1|1|6|321|541 |
| chr2_4 | exon | 35830407 | 35831079 | 35830407 | ID=Msa0326260-mRNA-1:exon:11068;Parent=Msa0326260-mRNA-1 |
| chr2_4 | exon | 35831808 | 35832157 | 35831808 | ID=Msa0326260-mRNA-1:exon:11067;Parent=Msa0326260-mRNA-1 |
| chr2_4 | exon | 35832294 | 35832469 | 35832294 | ID=Msa0326260-mRNA-1:exon:11066;Parent=Msa0326260-mRNA-1 |
| chr2_4 | exon | 35832611 | 35832804 | 35832611 | ID=Msa0326260-mRNA-1:exon:11065;Parent=Msa0326260-mRNA-1 |
| chr2_4 | exon | 35834036 | 35834151 | 35834036 | ID=Msa0326260-mRNA-1:exon:11064;Parent=Msa0326260-mRNA-1 |
| chr2_4 | exon | 35836474 | 35836911 | 35836474 | ID=Msa0326260-mRNA-1:exon:11063;Parent=Msa0326260-mRNA-1 |
| chr2_4 | CDS | 35836474 | 35836911 | 35836474 | ID=Msa0326260-mRNA-1:cds;Parent=Msa0326260-mRNA-1 |
| chr2_4 | CDS | 35834036 | 35834151 | 35834036 | ID=Msa0326260-mRNA-1:cds;Parent=Msa0326260-mRNA-1 |
| chr2_4 | CDS | 35832611 | 35832804 | 35832611 | ID=Msa0326260-mRNA-1:cds;Parent=Msa0326260-mRNA-1 |
| chr2_4 | CDS | 35832294 | 35832469 | 35832294 | ID=Msa0326260-mRNA-1:cds;Parent=Msa0326260-mRNA-1 |
| chr2_4 | CDS | 35831808 | 35832157 | 35831808 | ID=Msa0326260-mRNA-1:cds;Parent=Msa0326260-mRNA-1 |
| chr2_4 | CDS | 35830728 | 35831079 | 35830728 | ID=Msa0326260-mRNA-1:cds;Parent=Msa0326260-mRNA-1 |
| chr2_4 | three_prime_UTR | 35830407 | 35830727 | 35830407 | ID=Msa0326260-mRNA-1:three_prime_utr;Parent=Msa0326260-mRNA-1 |
| Gene Sequence |
| Protein sequence |
