Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0206080 | XP_024631713.2 | 92.070 | 517 | 41 | 0 | 1 | 517 | 1 | 517 | 0.0 | 980 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0206080 | sp|Q9LMA1|FMO1_ARATH | 42.389 | 519 | 278 | 11 | 4 | 512 | 12 | 519 | 1.62e-136 | 408 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0206080 | A0A396J7C8 | 92.070 | 517 | 41 | 0 | 1 | 517 | 1 | 517 | 0.0 | 980 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003470 | Msa0206080 | 0.821266 | 4.424783e-53 | -8.615850e-47 |
| Msa0017120 | Msa0206080 | 0.817009 | 4.117389e-52 | -8.615850e-47 |
| Msa0043680 | Msa0206080 | 0.800988 | 1.113017e-48 | -8.615850e-47 |
| Msa0056040 | Msa0206080 | 0.828685 | 7.833939e-55 | -8.615850e-47 |
| Msa0065390 | Msa0206080 | 0.814934 | 1.196234e-51 | -8.615850e-47 |
| Msa0070990 | Msa0206080 | 0.801523 | 8.648804e-49 | -8.615850e-47 |
| Msa0077910 | Msa0206080 | 0.801787 | 7.637252e-49 | -8.615850e-47 |
| Msa0078520 | Msa0206080 | 0.820569 | 6.401784e-53 | -8.615850e-47 |
| Msa0094420 | Msa0206080 | 0.802118 | 6.527954e-49 | -8.615850e-47 |
| Msa0110710 | Msa0206080 | 0.816615 | 5.047699e-52 | -8.615850e-47 |
| Msa0125800 | Msa0206080 | 0.804777 | 1.835580e-49 | -8.615850e-47 |
| Msa0126300 | Msa0206080 | 0.819835 | 9.424239e-53 | -8.615850e-47 |
| Msa0146470 | Msa0206080 | 0.808245 | 3.404436e-50 | -8.615850e-47 |
| Msa0157020 | Msa0206080 | 0.811391 | 7.166519e-51 | -8.615850e-47 |
| Msa0170440 | Msa0206080 | 0.802466 | 5.537234e-49 | -8.615850e-47 |
| Msa0175900 | Msa0206080 | 0.800230 | 1.588996e-48 | -8.615850e-47 |
| Msa0206080 | Msa0206120 | 0.912122 | 2.793793e-83 | -8.615850e-47 |
| Msa0206080 | Msa0206130 | 0.861922 | 7.297655e-64 | -8.615850e-47 |
| Msa0206080 | Msa0206160 | 0.897855 | 9.379563e-77 | -8.615850e-47 |
| Msa0206080 | Msa0206180 | 0.830958 | 2.189739e-55 | -8.615850e-47 |
| Msa0206080 | Msa0206190 | 0.862154 | 6.194550e-64 | -8.615850e-47 |
| Msa0206080 | Msa0206200 | 0.812180 | 4.826476e-51 | -8.615850e-47 |
| Msa0206080 | Msa0249270 | 0.918701 | 1.125301e-86 | -8.615850e-47 |
| Msa0206080 | Msa0261440 | 0.812026 | 5.213501e-51 | -8.615850e-47 |
| Msa0206080 | Msa0263430 | 0.800242 | 1.579641e-48 | -8.615850e-47 |
| Msa0206080 | Msa0291040 | 0.803215 | 3.876500e-49 | -8.615850e-47 |
| Msa0206080 | Msa0295270 | 0.802652 | 5.068018e-49 | -8.615850e-47 |
| Msa0206080 | Msa0301020 | 0.803352 | 3.631352e-49 | -8.615850e-47 |
| Msa0206080 | Msa0306130 | 0.816320 | 5.875807e-52 | -8.615850e-47 |
| Msa0206080 | Msa0307460 | 0.808468 | 3.051447e-50 | -8.615850e-47 |
| Msa0206080 | Msa0326260 | 0.836463 | 9.218891e-57 | -8.615850e-47 |
| Msa0206080 | Msa0326270 | 0.860887 | 1.509988e-63 | -8.615850e-47 |
| Msa0206080 | Msa0326280 | 0.891076 | 5.525817e-74 | -8.615850e-47 |
| Msa0206080 | Msa0358230 | 0.833374 | 5.532455e-56 | -8.615850e-47 |
| Msa0206080 | Msa0380060 | 0.814317 | 1.638372e-51 | -8.615850e-47 |
| Msa0206080 | Msa0382290 | 0.835112 | 2.028171e-56 | -8.615850e-47 |
| Msa0206080 | Msa0417630 | 0.833760 | 4.432416e-56 | -8.615850e-47 |
| Msa0206080 | Msa0418480 | 0.830046 | 3.661188e-55 | -8.615850e-47 |
| Msa0206080 | Msa0420070 | 0.810670 | 1.027128e-50 | -8.615850e-47 |
| Msa0206080 | Msa0429270 | 0.805287 | 1.435648e-49 | -8.615850e-47 |
| Msa0206080 | Msa0429520 | -0.809896 | 1.508487e-50 | -8.615850e-47 |
| Msa0206080 | Msa0431800 | 0.811943 | 5.437074e-51 | -8.615850e-47 |
| Msa0206080 | Msa0436450 | 0.806581 | 7.675449e-50 | -8.615850e-47 |
| Msa0206080 | Msa0465860 | 0.838161 | 3.389638e-57 | -8.615850e-47 |
| Msa0206080 | Msa0482580 | 0.823614 | 1.260163e-53 | -8.615850e-47 |
| Msa0206080 | Msa0485280 | 0.800826 | 1.201409e-48 | -8.615850e-47 |
| Msa0206080 | Msa0510230 | 0.845792 | 3.255840e-59 | -8.615850e-47 |
| Msa0206080 | Msa0519200 | 0.829125 | 6.133105e-55 | -8.615850e-47 |
| Msa0206080 | Msa0520730 | 0.813252 | 2.812588e-51 | -8.615850e-47 |
| Msa0206080 | Msa0521780 | -0.802745 | 4.848628e-49 | -8.615850e-47 |
| Msa0206080 | Msa0526130 | 0.814210 | 1.730002e-51 | -8.615850e-47 |
| Msa0206080 | Msa0537270 | 0.801332 | 9.466221e-49 | -8.615850e-47 |
| Msa0206080 | Msa0538570 | 0.800088 | 1.698225e-48 | -8.615850e-47 |
| Msa0206080 | Msa0546740 | 0.813764 | 2.169694e-51 | -8.615850e-47 |
| Msa0206080 | Msa0547050 | 0.844637 | 6.681127e-59 | -8.615850e-47 |
| Msa0206080 | Msa0593710 | 0.815836 | 7.539212e-52 | -8.615850e-47 |
| Msa0206080 | Msa0594390 | 0.805719 | 1.165598e-49 | -8.615850e-47 |
| Msa0206080 | Msa0599690 | 0.819048 | 1.424749e-52 | -8.615850e-47 |
| Msa0206080 | Msa0600390 | 0.809162 | 2.168690e-50 | -8.615850e-47 |
| Msa0206080 | Msa0601780 | 0.827012 | 1.978378e-54 | -8.615850e-47 |
| Msa0206080 | Msa0620090 | 0.815611 | 8.461199e-52 | -8.615850e-47 |
| Msa0206080 | Msa0633750 | 0.810358 | 1.199427e-50 | -8.615850e-47 |
| Msa0206080 | Msa0640880 | 0.821053 | 4.953932e-53 | -8.615850e-47 |
| Msa0206080 | Msa0659960 | 0.808677 | 2.754216e-50 | -8.615850e-47 |
| Msa0206080 | Msa0662850 | 0.823306 | 1.487380e-53 | -8.615850e-47 |
| Msa0206080 | Msa0678890 | 0.822225 | 2.654447e-53 | -8.615850e-47 |
| Msa0206080 | Msa0681890 | 0.831797 | 1.361927e-55 | -8.615850e-47 |
| Msa0206080 | Msa0690500 | 0.819167 | 1.339090e-52 | -8.615850e-47 |
| Msa0206080 | Msa0700910 | 0.809438 | 1.892336e-50 | -8.615850e-47 |
| Msa0206080 | Msa0703720 | 0.806482 | 8.052486e-50 | -8.615850e-47 |
| Msa0206080 | Msa0704720 | 0.805638 | 1.211817e-49 | -8.615850e-47 |
| Msa0206080 | Msa0706530 | 0.819348 | 1.217584e-52 | -8.615850e-47 |
| Msa0206080 | Msa0733110 | 0.810003 | 1.430803e-50 | -8.615850e-47 |
| Msa0206080 | Msa0739570 | 0.819300 | 1.248333e-52 | -8.615850e-47 |
| Msa0206080 | Msa0782330 | 0.830185 | 3.385953e-55 | -8.615850e-47 |
| Msa0206080 | Msa0802500 | 0.819478 | 1.137048e-52 | -8.615850e-47 |
| Msa0206080 | Msa0803130 | 0.806081 | 9.781604e-50 | -8.615850e-47 |
| Msa0206080 | Msa0841490 | 0.806345 | 8.604436e-50 | -8.615850e-47 |
| Msa0206080 | Msa0860270 | 0.806062 | 9.872081e-50 | -8.615850e-47 |
| Msa0206080 | Msa0958020 | 0.824998 | 5.956041e-54 | -8.615850e-47 |
| Msa0206080 | Msa0990520 | 0.804320 | 2.286389e-49 | -8.615850e-47 |
| Msa0206080 | Msa0992570 | 0.841476 | 4.642558e-58 | -8.615850e-47 |
| Msa0206080 | Msa0992590 | 0.831773 | 1.380534e-55 | -8.615850e-47 |
| Msa0206080 | Msa1002040 | 0.813497 | 2.483997e-51 | -8.615850e-47 |
| Msa0206080 | Msa1022310 | 0.804333 | 2.272074e-49 | -8.615850e-47 |
| Msa0206080 | Msa1027790 | 0.815402 | 9.415398e-52 | -8.615850e-47 |
| Msa0206080 | Msa1030280 | 0.809590 | 1.754847e-50 | -8.615850e-47 |
| Msa0206080 | Msa1045440 | 0.805649 | 1.205787e-49 | -8.615850e-47 |
| Msa0206080 | Msa1050240 | 0.806867 | 6.677080e-50 | -8.615850e-47 |
| Msa0206080 | Msa1061180 | 0.812303 | 4.537946e-51 | -8.615850e-47 |
| Msa0206080 | Msa1106560 | 0.807604 | 4.661124e-50 | -8.615850e-47 |
| Msa0206080 | Msa1106580 | 0.803262 | 3.791791e-49 | -8.615850e-47 |
| Msa0206080 | Msa1112610 | 0.818538 | 1.860669e-52 | -8.615850e-47 |
| Msa0206080 | Msa1175750 | 0.805903 | 1.066086e-49 | -8.615850e-47 |
| Msa0206080 | Msa1183760 | 0.822501 | 2.290572e-53 | -8.615850e-47 |
| Msa0206080 | Msa1200920 | 0.816844 | 4.485140e-52 | -8.615850e-47 |
| Msa0206080 | Msa1215210 | 0.837778 | 4.251003e-57 | -8.615850e-47 |
| Msa0206080 | Msa1219250 | 0.825332 | 4.966856e-54 | -8.615850e-47 |
| Msa0206080 | Msa1232860 | 0.813103 | 3.031952e-51 | -8.615850e-47 |
| Msa0206080 | Msa1254170 | 0.838969 | 2.096872e-57 | -8.615850e-47 |
| Msa0206080 | Msa1302170 | 0.837898 | 3.960017e-57 | -8.615850e-47 |
| Msa0206080 | Msa1307370 | 0.802373 | 5.784476e-49 | -8.615850e-47 |
| Msa0206080 | Msa1367810 | 0.817750 | 2.804220e-52 | -8.615850e-47 |
| Msa0206080 | Msa1379980 | 0.803870 | 2.835383e-49 | -8.615850e-47 |
| Msa0206080 | Msa1388850 | 0.823257 | 1.526513e-53 | -8.615850e-47 |
| Msa0206080 | Msa1405770 | 0.810628 | 1.048569e-50 | -8.615850e-47 |
| Msa0206080 | Msa1421810 | 0.833934 | 4.008546e-56 | -8.615850e-47 |
| Msa0206080 | Msa1422750 | 0.823797 | 1.141469e-53 | -8.615850e-47 |
| Msa0206080 | Msa1435050 | 0.811714 | 6.096810e-51 | -8.615850e-47 |
| Msa0206080 | Msa1439680 | 0.804536 | 2.060921e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0206080 | MtrunA17_Chr2g0304721 | 92.070 | 517 | 41 | 0 | 1 | 517 | 1 | 517 | 0.0 | 980 |
| Msa0206080 | MtrunA17_Chr2g0305211 | 78.654 | 520 | 108 | 1 | 1 | 517 | 1 | 520 | 0.0 | 870 |
| Msa0206080 | MtrunA17_Chr2g0305231 | 78.654 | 520 | 108 | 1 | 1 | 517 | 1 | 520 | 0.0 | 870 |
| Msa0206080 | MtrunA17_Chr2g0304651 | 77.885 | 520 | 110 | 2 | 1 | 517 | 1 | 518 | 0.0 | 840 |
| Msa0206080 | MtrunA17_Chr2g0301661 | 40.936 | 513 | 292 | 8 | 4 | 511 | 13 | 519 | 1.28e-126 | 379 |
| Msa0206080 | MtrunA17_Chr2g0301471 | 41.326 | 513 | 290 | 8 | 4 | 511 | 13 | 519 | 1.28e-123 | 372 |
| Msa0206080 | MtrunA17_Chr4g0070101 | 41.566 | 498 | 264 | 12 | 27 | 511 | 36 | 519 | 2.02e-121 | 366 |
| Msa0206080 | MtrunA17_Chr4g0070111 | 40.780 | 282 | 162 | 4 | 233 | 512 | 1 | 279 | 6.39e-68 | 220 |
| Msa0206080 | MtrunA17_Chr2g0286701 | 39.574 | 235 | 137 | 4 | 1 | 233 | 10 | 241 | 6.01e-55 | 187 |
| Msa0206080 | MtrunA17_Chr4g0070121 | 42.995 | 207 | 103 | 3 | 27 | 225 | 36 | 235 | 1.01e-48 | 168 |
| Msa0206080 | MtrunA17_Chr2g0286681 | 41.584 | 101 | 58 | 1 | 288 | 388 | 19 | 118 | 4.38e-23 | 94.4 |
| Msa0206080 | MtrunA17_Chr2g0286671 | 39.604 | 101 | 60 | 1 | 411 | 511 | 1 | 100 | 1.75e-18 | 80.9 |
| Msa0206080 | MtrunA17_Chr1g0182991 | 26.064 | 376 | 210 | 19 | 7 | 376 | 27 | 340 | 7.39e-17 | 82.8 |
| Msa0206080 | MtrunA17_Chr8g0352461 | 25.692 | 253 | 131 | 7 | 4 | 232 | 3 | 222 | 2.62e-15 | 78.2 |
| Msa0206080 | MtrunA17_Chr1g0148801 | 26.190 | 378 | 204 | 17 | 7 | 376 | 18 | 328 | 3.58e-15 | 77.4 |
| Msa0206080 | MtrunA17_Chr7g0268621 | 25.722 | 381 | 209 | 19 | 2 | 374 | 3 | 317 | 3.94e-15 | 77.4 |
| Msa0206080 | MtrunA17_Chr8g0352481 | 25.692 | 253 | 130 | 7 | 4 | 232 | 3 | 221 | 6.92e-15 | 76.6 |
| Msa0206080 | MtrunA17_Chr7g0262591 | 25.000 | 376 | 212 | 18 | 6 | 376 | 25 | 335 | 1.24e-14 | 75.9 |
| Msa0206080 | MtrunA17_Chr8g0350371 | 25.849 | 383 | 205 | 18 | 2 | 374 | 3 | 316 | 2.01e-13 | 72.0 |
| Msa0206080 | MtrunA17_Chr4g0025641 | 27.111 | 225 | 128 | 8 | 1 | 223 | 12 | 202 | 3.70e-13 | 69.3 |
| Msa0206080 | MtrunA17_Chr5g0412881 | 24.611 | 386 | 206 | 16 | 2 | 374 | 3 | 316 | 9.44e-13 | 69.7 |
| Msa0206080 | MtrunA17_Chr3g0139441 | 26.790 | 377 | 209 | 18 | 6 | 376 | 40 | 355 | 2.66e-12 | 68.9 |
| Msa0206080 | MtrunA17_Chr3g0091441 | 27.165 | 254 | 132 | 11 | 3 | 229 | 11 | 238 | 7.24e-12 | 67.4 |
| Msa0206080 | MtrunA17_Chr1g0147221 | 24.868 | 378 | 212 | 20 | 7 | 376 | 44 | 357 | 1.83e-11 | 66.2 |
| Msa0206080 | MtrunA17_Chr6g0485621 | 24.011 | 379 | 218 | 17 | 7 | 376 | 34 | 351 | 7.25e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0206080 | AT1G19250.1 | 42.389 | 519 | 278 | 11 | 4 | 512 | 12 | 519 | 1.64e-137 | 408 |
| Msa0206080 | AT5G45180.1 | 38.431 | 497 | 249 | 13 | 4 | 492 | 12 | 459 | 1.37e-108 | 331 |
| Msa0206080 | AT4G28720.1 | 26.984 | 378 | 209 | 20 | 6 | 376 | 26 | 343 | 4.22e-17 | 84.0 |
| Msa0206080 | AT1G62560.2 | 26.772 | 254 | 127 | 9 | 3 | 229 | 11 | 232 | 3.13e-15 | 78.2 |
| Msa0206080 | AT1G48910.1 | 25.661 | 378 | 214 | 16 | 1 | 374 | 1 | 315 | 3.90e-15 | 77.8 |
| Msa0206080 | AT1G62560.1 | 26.772 | 254 | 127 | 9 | 3 | 229 | 11 | 232 | 4.66e-15 | 77.8 |
| Msa0206080 | AT5G43890.1 | 26.596 | 376 | 211 | 19 | 7 | 376 | 27 | 343 | 1.08e-14 | 76.6 |
| Msa0206080 | AT5G11320.1 | 25.984 | 381 | 199 | 16 | 7 | 376 | 19 | 327 | 2.30e-14 | 75.5 |
| Msa0206080 | AT4G32540.2 | 26.455 | 378 | 205 | 19 | 7 | 376 | 23 | 335 | 2.47e-14 | 75.5 |
| Msa0206080 | AT5G11320.2 | 25.984 | 381 | 199 | 16 | 7 | 376 | 19 | 327 | 3.58e-14 | 74.3 |
| Msa0206080 | AT4G32540.1 | 26.190 | 378 | 204 | 19 | 7 | 376 | 23 | 333 | 7.03e-14 | 73.9 |
| Msa0206080 | AT5G07800.1 | 26.154 | 260 | 128 | 9 | 3 | 229 | 14 | 242 | 1.65e-13 | 73.2 |
| Msa0206080 | AT1G65860.1 | 23.622 | 254 | 134 | 7 | 3 | 229 | 11 | 231 | 4.56e-13 | 71.6 |
| Msa0206080 | AT1G62620.2 | 25.896 | 251 | 132 | 8 | 5 | 229 | 13 | 235 | 6.70e-13 | 70.9 |
| Msa0206080 | AT1G62620.1 | 25.896 | 251 | 132 | 8 | 5 | 229 | 13 | 235 | 8.31e-13 | 70.9 |
| Msa0206080 | AT1G04610.1 | 26.273 | 373 | 217 | 16 | 7 | 376 | 39 | 356 | 1.01e-12 | 70.5 |
| Msa0206080 | AT1G63370.2 | 25.498 | 251 | 133 | 8 | 5 | 229 | 13 | 235 | 2.37e-12 | 68.6 |
| Msa0206080 | AT1G63370.1 | 25.498 | 251 | 133 | 8 | 5 | 229 | 13 | 235 | 2.85e-12 | 69.3 |
| Msa0206080 | AT4G13260.1 | 23.636 | 385 | 209 | 17 | 7 | 376 | 30 | 344 | 4.28e-12 | 68.6 |
| Msa0206080 | AT4G13260.2 | 24.242 | 297 | 171 | 13 | 7 | 288 | 30 | 287 | 7.94e-12 | 67.0 |
| Msa0206080 | AT1G21430.1 | 25.737 | 373 | 210 | 17 | 5 | 374 | 9 | 317 | 1.08e-11 | 67.0 |
Find 112 sgRNAs with CRISPR-Local
Find 293 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATCCTATCATTGCCAATTT+TGG | 0.050890 | 2_1:+34526647 | None:intergenic |
| TCTCCTAGATTTCAACATTT+TGG | 0.064568 | 2_1:-34527735 | Msa0206080:CDS |
| TTGAACTGTCAATGTAATTT+TGG | 0.131877 | 2_1:+34527179 | None:intergenic |
| AATAACTACATCTGTTTCTA+AGG | 0.224263 | 2_1:+34527261 | None:intergenic |
| TAGTCTTATTATTTACAAAA+TGG | 0.231432 | 2_1:-34531051 | Msa0206080:exon |
| CCCGGAGAACACTTCCTTCT+TGG | 0.233331 | 2_1:-34527656 | Msa0206080:CDS |
| ACACTTCCTTCTTGGCCTTT+TGG | 0.237410 | 2_1:-34527648 | Msa0206080:CDS |
| TGGAGAAGGATGTTAAATTA+TGG | 0.260934 | 2_1:-34526526 | Msa0206080:CDS |
| CCCAAGGAAAATCTGAAAAT+TGG | 0.266448 | 2_1:+34530862 | None:intergenic |
| AGGTAAGGTTATGCATTCTA+TGG | 0.272924 | 2_1:-34528024 | Msa0206080:CDS |
| GAAAATTGGTATGCTTGTTT+TGG | 0.274150 | 2_1:+34530876 | None:intergenic |
| ACATCCTCGCATCCCAAAAT+TGG | 0.284230 | 2_1:-34526660 | Msa0206080:CDS |
| GAAATATCTGCATGTCAAAT+TGG | 0.294249 | 2_1:-34527397 | Msa0206080:CDS |
| TCAGCAGAATACATGGTAAT+TGG | 0.303318 | 2_1:-34526266 | Msa0206080:three_prime_UTR |
| TACCTTTGTTGAGAAATTCT+TGG | 0.304695 | 2_1:+34530614 | None:intergenic |
| GAATCTTATGTAAGGAATAA+TGG | 0.308729 | 2_1:+34530764 | None:intergenic |
| ATATGAAGTCATGGGAATTA+TGG | 0.316758 | 2_1:-34530695 | Msa0206080:CDS |
| TTAGTTTATTGACTCGTCTA+TGG | 0.318799 | 2_1:-34526047 | Msa0206080:three_prime_UTR |
| TTTGTTTATGTTATAACATA+TGG | 0.320348 | 2_1:-34526017 | Msa0206080:three_prime_UTR |
| TAAATAATAAGACTAATTAC+TGG | 0.331527 | 2_1:+34531059 | None:intergenic |
| GCGGAGCTATTTGAACCATA+TGG | 0.339270 | 2_1:-34526374 | Msa0206080:CDS |
| AAAATTACATTGACAGTTCA+AGG | 0.349499 | 2_1:-34527177 | Msa0206080:CDS |
| TCTTGAAGAAAACTATGATT+AGG | 0.356221 | 2_1:+34527418 | None:intergenic |
| CTTTGCATTGGGAAATATAG+TGG | 0.362241 | 2_1:-34528098 | Msa0206080:CDS |
| ACCATTTGCATCTGCGCATT+CGG | 0.365561 | 2_1:+34527905 | None:intergenic |
| GAAACCAGCGCGCAGTTCTA+TGG | 0.366149 | 2_1:+34527756 | None:intergenic |
| ATTCTTGCCACAGGATATAA+AGG | 0.366577 | 2_1:-34527241 | Msa0206080:CDS |
| AATAAGAGAGTTACAGTAGT+AGG | 0.371604 | 2_1:-34527957 | Msa0206080:CDS |
| AGTGGTAATGGATGTCCTTT+TGG | 0.374311 | 2_1:-34530672 | Msa0206080:CDS |
| TGCAAATATGCTCTACAGAT+TGG | 0.376558 | 2_1:-34530981 | Msa0206080:CDS |
| CAATAGATAGCTTTATCCTT+TGG | 0.378636 | 2_1:-34526178 | Msa0206080:three_prime_UTR |
| TAGCACACCTCTAAACAAAA+AGG | 0.384966 | 2_1:+34526306 | None:intergenic |
| TGCCCAAAATGTTGAAATCT+AGG | 0.386822 | 2_1:+34527732 | None:intergenic |
| GTTATTGATATTGATTATGT+TGG | 0.393997 | 2_1:-34530732 | Msa0206080:CDS |
| GGGAGGAACTCAGGAATGTT+TGG | 0.394469 | 2_1:+34528071 | None:intergenic |
| GGAGAAGGATGTTAAATTAT+GGG | 0.394999 | 2_1:-34526525 | Msa0206080:CDS |
| TTGGAATTGAATCTTATGTA+AGG | 0.401516 | 2_1:+34530756 | None:intergenic |
| GCCAAGAAGGAAGTGTTCTC+CGG | 0.407386 | 2_1:+34527655 | None:intergenic |
| TTCTATGGATTACTCTTCCT+TGG | 0.411045 | 2_1:-34528009 | Msa0206080:CDS |
| AAGTTGCCACTGAAGAAGTA+TGG | 0.417922 | 2_1:-34527448 | Msa0206080:CDS |
| GTTCAAGGATTTCTCTCTAT+AGG | 0.419814 | 2_1:-34527162 | Msa0206080:intron |
| TCTAGAACTTGCTTATTACT+TGG | 0.420077 | 2_1:+34530816 | None:intergenic |
| CGGAGCTATTTGAACCATAT+GGG | 0.422701 | 2_1:-34526373 | Msa0206080:CDS |
| TTGTTGAAACATATCTGAAA+TGG | 0.425780 | 2_1:-34527471 | Msa0206080:CDS |
| AGCTTTAGCTTCTGCAAAGA+AGG | 0.430511 | 2_1:-34527310 | Msa0206080:CDS |
| TTATAATCAGTGGGCCCATA+TGG | 0.433595 | 2_1:+34526359 | None:intergenic |
| GCATTGTTACTTGTGGCATA+TGG | 0.438868 | 2_1:-34526457 | Msa0206080:CDS |
| ATAATCAATATCAATAACTT+TGG | 0.441168 | 2_1:+34530737 | None:intergenic |
| ATGATGGTGTTGGAGGACTA+TGG | 0.447006 | 2_1:-34530932 | Msa0206080:CDS |
| AGTTTGTTATTCTTTGCATT+GGG | 0.451815 | 2_1:-34528109 | Msa0206080:CDS |
| GAGTTTGTTATTCTTTGCAT+TGG | 0.462117 | 2_1:-34528110 | Msa0206080:CDS |
| TTGTGATTTCTTTATCTCGA+TGG | 0.463038 | 2_1:+34527333 | None:intergenic |
| AACATTCCTGAGTTCCTCCC+TGG | 0.466304 | 2_1:-34528068 | Msa0206080:CDS |
| TGTAATATGCCATGTTCCCT+TGG | 0.468200 | 2_1:+34530647 | None:intergenic |
| CCTGAGTTCCTCCCTGGAAA+AGG | 0.469202 | 2_1:-34528062 | Msa0206080:CDS |
| GACGAGTCAATAAACTAAGA+AGG | 0.469643 | 2_1:+34526052 | None:intergenic |
| TGGGAATTATGGAGTGGTAA+TGG | 0.469776 | 2_1:-34530684 | Msa0206080:CDS |
| TATGGGCCCACTGATTATAA+TGG | 0.482729 | 2_1:-34526356 | Msa0206080:CDS |
| GGCCACCTTACTATCACCAT+TGG | 0.485362 | 2_1:-34527627 | Msa0206080:intron |
| AAAGTTTGCTATAAATGAAA+AGG | 0.487165 | 2_1:+34526082 | None:intergenic |
| TTGGTCACCTTTATATCCTG+TGG | 0.488352 | 2_1:+34527234 | None:intergenic |
| TCTTACCAATGGTGATAGTA+AGG | 0.489855 | 2_1:+34527622 | None:intergenic |
| AGAGTTGCAATTGTTGGTGC+AGG | 0.491948 | 2_1:-34531023 | Msa0206080:CDS |
| ATGGTAATTGGAGGGGTACA+TGG | 0.492208 | 2_1:-34526254 | Msa0206080:three_prime_UTR |
| TCATCAGCTTCATATACAAC+AGG | 0.497177 | 2_1:+34530951 | None:intergenic |
| AACAAGACCATTATAATCAG+TGG | 0.502752 | 2_1:+34526349 | None:intergenic |
| ATCCCAAAATTGGCAATGAT+AGG | 0.503683 | 2_1:-34526650 | Msa0206080:CDS |
| AGAGTTACAGTAGTAGGCTC+AGG | 0.504894 | 2_1:-34527951 | Msa0206080:CDS |
| AAAAGACCCTTCTTTCTCCT+CGG | 0.506769 | 2_1:+34526398 | None:intergenic |
| CTAGAAAATGTGCTAACCAT+TGG | 0.509768 | 2_1:+34526582 | None:intergenic |
| CATGTTCCCTTGGAGCCAAA+AGG | 0.521090 | 2_1:+34530657 | None:intergenic |
| TATGTTATAACATAAACAAA+AGG | 0.522704 | 2_1:+34526020 | None:intergenic |
| GTGATAGTAAGGTGGCCAAA+AGG | 0.527800 | 2_1:+34527633 | None:intergenic |
| GATGTAGTTATTCTTGCCAC+AGG | 0.531258 | 2_1:-34527250 | Msa0206080:CDS |
| CTGATGAAGATATGAAGTCA+TGG | 0.535713 | 2_1:-34530704 | Msa0206080:CDS |
| TCTCACTTCAGCAGAATACA+TGG | 0.541686 | 2_1:-34526273 | Msa0206080:three_prime_UTR |
| TATGAAGCTGATGATGGTGT+TGG | 0.543117 | 2_1:-34530942 | Msa0206080:CDS |
| TGATGAACTCAGATAGATGC+AGG | 0.543614 | 2_1:+34531095 | None:intergenic |
| AGGTGGCCAAAAGGCCAAGA+AGG | 0.545267 | 2_1:+34527642 | None:intergenic |
| CCAAGAAGGAAGTGTTCTCC+GGG | 0.546254 | 2_1:+34527656 | None:intergenic |
| ATAACTACATCTGTTTCTAA+GGG | 0.546830 | 2_1:+34527262 | None:intergenic |
| GCCGAATGCGCAGATGCAAA+TGG | 0.549258 | 2_1:-34527906 | Msa0206080:intron |
| GCAGAATACATGGTAATTGG+AGG | 0.551730 | 2_1:-34526263 | Msa0206080:three_prime_UTR |
| GTGTAATCCGAGGAGAAAGA+AGG | 0.551929 | 2_1:-34526405 | Msa0206080:CDS |
| GTTGTATATGAAGCTGATGA+TGG | 0.564559 | 2_1:-34530948 | Msa0206080:CDS |
| GAAGCTGATGATGGTGTTGG+AGG | 0.565452 | 2_1:-34530939 | Msa0206080:CDS |
| ATTGCCTAGTATAAAAGTGA+TGG | 0.568840 | 2_1:-34526546 | Msa0206080:CDS |
| CAGAATACATGGTAATTGGA+GGG | 0.575360 | 2_1:-34526262 | Msa0206080:three_prime_UTR |
| TACCAAGAATTTCTCAACAA+AGG | 0.578314 | 2_1:-34530616 | Msa0206080:intron |
| ACGAGTCAATAAACTAAGAA+GGG | 0.580449 | 2_1:+34526053 | None:intergenic |
| TGATGAAGATATGAAGTCAT+GGG | 0.593792 | 2_1:-34530703 | Msa0206080:CDS |
| GGCAATGATAGGATATGCTG+AGG | 0.603017 | 2_1:-34526639 | Msa0206080:CDS |
| AGATCATGCATTGTTACTTG+TGG | 0.603581 | 2_1:-34526464 | Msa0206080:CDS |
| TAGTATAAAAGTGATGGAGA+AGG | 0.619337 | 2_1:-34526540 | Msa0206080:CDS |
| GTTCTATGGATAATCGTGCA+AGG | 0.619433 | 2_1:+34527770 | None:intergenic |
| AGAATACATGGTAATTGGAG+GGG | 0.620771 | 2_1:-34526261 | Msa0206080:three_prime_UTR |
| AATAATGACAAATAAACCAA+AGG | 0.621111 | 2_1:+34526162 | None:intergenic |
| GAGCATATTTGCAAGCAAGT+AGG | 0.621227 | 2_1:+34530991 | None:intergenic |
| TTCTATGGATAATCGTGCAA+GGG | 0.621581 | 2_1:+34527771 | None:intergenic |
| ATTGTTGGTGCAGGAATCAG+TGG | 0.624826 | 2_1:-34531014 | Msa0206080:CDS |
| TTATCCATAGAACTGCGCGC+TGG | 0.626391 | 2_1:-34527760 | Msa0206080:CDS |
| ACAAGACCATTATAATCAGT+GGG | 0.632491 | 2_1:+34526350 | None:intergenic |
| TGTAATCCGAGGAGAAAGAA+GGG | 0.645189 | 2_1:-34526404 | Msa0206080:CDS |
| ACTAGTCCATACTTCTTCAG+TGG | 0.645916 | 2_1:+34527442 | None:intergenic |
| GAGACATGAAGTGTAATCCG+AGG | 0.647245 | 2_1:-34526415 | Msa0206080:CDS |
| CTAATGAAATGAGATGCCAA+TGG | 0.660576 | 2_1:-34526598 | Msa0206080:CDS |
| TACCAATGGTGATAGTAAGG+TGG | 0.665277 | 2_1:+34527625 | None:intergenic |
| TAGAGAAAGCACAACACTCG+TGG | 0.665571 | 2_1:-34526224 | Msa0206080:three_prime_UTR |
| AAGTCATGGGAATTATGGAG+TGG | 0.671476 | 2_1:-34530690 | Msa0206080:CDS |
| GGGAACATGGCATATTACAG+TGG | 0.699925 | 2_1:-34530643 | Msa0206080:CDS |
| GCAATGATAGGATATGCTGA+GGG | 0.702690 | 2_1:-34526638 | Msa0206080:CDS |
| ATGGTGTTGGAGGACTATGG+AGG | 0.798552 | 2_1:-34530929 | Msa0206080:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATTAAAATTGTGTTTTTA+TGG | - | chr2_1:34526868-34526887 | Msa0206080:intron | 10.0% |
| !!! | TTTGTATCAAATTTTTAAAT+TGG | - | chr2_1:34527080-34527099 | Msa0206080:intron | 10.0% |
| !! | TTTATATCAAATTCTTAAAT+TGG | + | chr2_1:34527376-34527395 | None:intergenic | 10.0% |
| !!! | TTCTCAATTTTTTTATAATA+AGG | - | chr2_1:34527417-34527436 | Msa0206080:CDS | 10.0% |
| !! | AAACCAAAAATTAATATATT+CGG | + | chr2_1:34528384-34528403 | None:intergenic | 10.0% |
| !!! | TTAAAACTTTTAAAACATAA+CGG | + | chr2_1:34528451-34528470 | None:intergenic | 10.0% |
| !!! | TTAAAATTTTTAAAACGTAA+GGG | + | chr2_1:34528480-34528499 | None:intergenic | 10.0% |
| !!! | AAAAATCTAAAATAAACATA+AGG | - | chr2_1:34528779-34528798 | Msa0206080:intron | 10.0% |
| !!! | AAAATCTAAAATAAACATAA+GGG | - | chr2_1:34528780-34528799 | Msa0206080:intron | 10.0% |
| !! | TAAATAATAAGACTAATTAC+TGG | + | chr2_1:34526054-34526073 | None:intergenic | 15.0% |
| !!! | TAGTCTTATTATTTACAAAA+TGG | - | chr2_1:34526059-34526078 | Msa0206080:three_prime_UTR | 15.0% |
| !! | ATAATCAATATCAATAACTT+TGG | + | chr2_1:34526376-34526395 | None:intergenic | 15.0% |
| !!! | TTCATATTTCATTTTCTTTT+TGG | - | chr2_1:34526561-34526580 | Msa0206080:CDS | 15.0% |
| !!! | AAAAAATTTTCAGGATAATT+GGG | + | chr2_1:34526921-34526940 | None:intergenic | 15.0% |
| !!! | AAAAAAATTTTCAGGATAAT+TGG | + | chr2_1:34526922-34526941 | None:intergenic | 15.0% |
| !!! | ATTGCTTTAAAAAAATTTTC+AGG | + | chr2_1:34526930-34526949 | None:intergenic | 15.0% |
| !! | TTTGACAAGAAATAATATTT+AGG | - | chr2_1:34526949-34526968 | Msa0206080:intron | 15.0% |
| !! | TTGACAAGAAATAATATTTA+GGG | - | chr2_1:34526950-34526969 | Msa0206080:intron | 15.0% |
| !! | AATTGAGAAAATTATCAAAT+TGG | + | chr2_1:34527406-34527425 | None:intergenic | 15.0% |
| !! | GAAAATTGTACATTTAATAT+AGG | + | chr2_1:34527636-34527655 | None:intergenic | 15.0% |
| !! | TTAAAACCTAAAATACATAA+TGG | + | chr2_1:34528422-34528441 | None:intergenic | 15.0% |
| !!! | CTTAAAATTTTTAAAACGTA+AGG | + | chr2_1:34528481-34528500 | None:intergenic | 15.0% |
| !!! | AGATTTTTTAGATTTTAAGT+TGG | + | chr2_1:34528767-34528786 | None:intergenic | 15.0% |
| !! | TCTTACAAAAACAAATAAAT+TGG | + | chr2_1:34529551-34529570 | None:intergenic | 15.0% |
| !!! | TATGTTTTATATGTATTTGT+AGG | + | chr2_1:34530032-34530051 | None:intergenic | 15.0% |
| !!! | AATATTCCAGAAAATTTTAT+TGG | - | chr2_1:34530623-34530642 | Msa0206080:CDS | 15.0% |
| !! | TATGTTATAACATAAACAAA+AGG | + | chr2_1:34531093-34531112 | None:intergenic | 15.0% |
| !! | TTTGTTTATGTTATAACATA+TGG | - | chr2_1:34531093-34531112 | Msa0206080:five_prime_UTR | 15.0% |
| !!! | GTTATTGATATTGATTATGT+TGG | - | chr2_1:34526378-34526397 | Msa0206080:CDS | 20.0% |
| !! | TTTCATAATTACAAATGTGT+TGG | - | chr2_1:34526588-34526607 | Msa0206080:CDS | 20.0% |
| !! | AGAAACATTAGAGATAAATA+AGG | - | chr2_1:34526647-34526666 | Msa0206080:CDS | 20.0% |
| !! | GAAACATTAGAGATAAATAA+GGG | - | chr2_1:34526648-34526667 | Msa0206080:CDS | 20.0% |
| !!! | CTCTAGTAAAACTATATTTT+GGG | + | chr2_1:34526723-34526742 | None:intergenic | 20.0% |
| !!! | TCTCTAGTAAAACTATATTT+TGG | + | chr2_1:34526724-34526743 | None:intergenic | 20.0% |
| !!! | CTCTAGTAAAACTATATTTT+GGG | + | chr2_1:34526723-34526742 | None:intergenic | 20.0% |
| !!! | TCTCTAGTAAAACTATATTT+TGG | + | chr2_1:34526724-34526743 | None:intergenic | 20.0% |
| !!! | CAATTTCACAATTTTAACAA+AGG | - | chr2_1:34526843-34526862 | Msa0206080:intron | 20.0% |
| !!! | GTCTTTTAGATATTATTTAG+TGG | + | chr2_1:34527244-34527263 | None:intergenic | 20.0% |
| !!! | ATTTTATGGTATCACTATAA+CGG | + | chr2_1:34527464-34527483 | None:intergenic | 20.0% |
| !!! | TTTATTTTAGATAGAAGAGA+TGG | - | chr2_1:34527681-34527700 | Msa0206080:CDS | 20.0% |
| !!! | TTTTTGGTTATAATAATGAC+CGG | + | chr2_1:34527940-34527959 | None:intergenic | 20.0% |
| !!! | TAACCAAAAATTGACTTTTT+AGG | - | chr2_1:34527950-34527969 | Msa0206080:CDS | 20.0% |
| !!! | TAAGCAAAAATTCACTTTTT+AGG | + | chr2_1:34528037-34528056 | None:intergenic | 20.0% |
| !!! | TTTGATCCATTATGTATTTT+AGG | - | chr2_1:34528413-34528432 | Msa0206080:intron | 20.0% |
| !!! | ATGTATTTTAGGTTTTAAGT+TGG | - | chr2_1:34528424-34528443 | Msa0206080:intron | 20.0% |
| !!! | TATGTTTTAAAGTTTCAAGT+TGG | + | chr2_1:34528710-34528729 | None:intergenic | 20.0% |
| !!! | ACTTGAAACTTTAAAACATA+AGG | - | chr2_1:34528710-34528729 | Msa0206080:intron | 20.0% |
| !!! | CTTGAAACTTTAAAACATAA+GGG | - | chr2_1:34528711-34528730 | Msa0206080:intron | 20.0% |
| !!! | TTGAAACTTTTAAGACATAA+AGG | - | chr2_1:34528740-34528759 | Msa0206080:intron | 20.0% |
| !!! | TTCTTTTACTTTGTCAAAAA+AGG | + | chr2_1:34529753-34529772 | None:intergenic | 20.0% |
| !!! | TTTTTTGACAAAGTAAAAGA+AGG | - | chr2_1:34529752-34529771 | Msa0206080:intron | 20.0% |
| !!! | TGAATATGCTTTTAAGTTTT+TGG | + | chr2_1:34529898-34529917 | None:intergenic | 20.0% |
| !!! | TCAATGTAATTTTGGAATAT+TGG | + | chr2_1:34529926-34529945 | None:intergenic | 20.0% |
| !! | CAAATCATACATAAGAAAAT+AGG | + | chr2_1:34530007-34530026 | None:intergenic | 20.0% |
| !!! | CTATTTTCTTATGTATGATT+TGG | - | chr2_1:34530005-34530024 | Msa0206080:intron | 20.0% |
| !!! | AATTTAAGATTAGCTTACAA+AGG | + | chr2_1:34530146-34530165 | None:intergenic | 20.0% |
| !! | TTGAAATATTAATAGAGTCA+AGG | + | chr2_1:34530172-34530191 | None:intergenic | 20.0% |
| !! | TGTAACAAAAACATAGATAA+AGG | + | chr2_1:34530238-34530257 | None:intergenic | 20.0% |
| !! | AAATATGTAAACCACTAAAT+TGG | + | chr2_1:34530359-34530378 | None:intergenic | 20.0% |
| !! | AAATTCTCTATACTAATCTA+TGG | - | chr2_1:34530405-34530424 | Msa0206080:intron | 20.0% |
| !! | AATAATGACAAATAAACCAA+AGG | + | chr2_1:34530951-34530970 | None:intergenic | 20.0% |
| !!! | AAAGTTTGCTATAAATGAAA+AGG | + | chr2_1:34531031-34531050 | None:intergenic | 20.0% |
| !!! | AAAATTGGTATGCTTGTTTT+GGG | + | chr2_1:34526236-34526255 | None:intergenic | 25.0% |
| ! | GAATCTTATGTAAGGAATAA+TGG | + | chr2_1:34526349-34526368 | None:intergenic | 25.0% |
| ! | TTGGAATTGAATCTTATGTA+AGG | + | chr2_1:34526357-34526376 | None:intergenic | 25.0% |
| ! | AGAGATAAATAAGGGAAATA+TGG | - | chr2_1:34526656-34526675 | Msa0206080:CDS | 25.0% |
| !! | TCTAGAGTAAATCATCAAAT+TGG | - | chr2_1:34527049-34527068 | Msa0206080:intron | 25.0% |
| ! | TTCTCAAATGTTTCTTAGAT+TGG | - | chr2_1:34527141-34527160 | Msa0206080:intron | 25.0% |
| ! | ACAAAACATCTAATAGAGTT+GGG | + | chr2_1:34527169-34527188 | None:intergenic | 25.0% |
| ! | TACAAAACATCTAATAGAGT+TGG | + | chr2_1:34527170-34527189 | None:intergenic | 25.0% |
| ! | GCTCTATTAATAACTCAAAA+TGG | + | chr2_1:34527347-34527366 | None:intergenic | 25.0% |
| ! | TGAGCTATACTATTAAGAAA+AGG | - | chr2_1:34527538-34527557 | Msa0206080:intron | 25.0% |
| ! | GAGCTATACTATTAAGAAAA+GGG | - | chr2_1:34527539-34527558 | Msa0206080:intron | 25.0% |
| ! | AGTTTCTAAATTTCTGTCTT+TGG | - | chr2_1:34527718-34527737 | Msa0206080:CDS | 25.0% |
| ! | ATTATCAACAAATCACAATG+TGG | + | chr2_1:34527874-34527893 | None:intergenic | 25.0% |
| !! | GAACCTAAAAAGTCAATTTT+TGG | + | chr2_1:34527956-34527975 | None:intergenic | 25.0% |
| ! | CATTCAATAAATGAAGTATG+TGG | - | chr2_1:34527975-34527994 | Msa0206080:CDS | 25.0% |
| ! | TATAATAATGAGTTAGTGAC+CGG | - | chr2_1:34528055-34528074 | Msa0206080:CDS | 25.0% |
| ! | AAAAATTAATATATTCGGCG+GGG | + | chr2_1:34528379-34528398 | None:intergenic | 25.0% |
| ! | CAAAAATTAATATATTCGGC+GGG | + | chr2_1:34528380-34528399 | None:intergenic | 25.0% |
| ! | CCAAAAATTAATATATTCGG+CGG | + | chr2_1:34528381-34528400 | None:intergenic | 25.0% |
| ! | TTAAACTCAATATCATGTTG+CGG | + | chr2_1:34528546-34528565 | None:intergenic | 25.0% |
| !! | ATGTCTTAAAAGTTTCAAGT+TGG | + | chr2_1:34528738-34528757 | None:intergenic | 25.0% |
| ! | AAGAGTTTACAAGGATATAT+TGG | + | chr2_1:34528838-34528857 | None:intergenic | 25.0% |
| ! | ACAAAGTTAAAGAGTTTACA+AGG | + | chr2_1:34528847-34528866 | None:intergenic | 25.0% |
| ! | TAAAGATTAACATGCTATCA+TGG | - | chr2_1:34528901-34528920 | Msa0206080:intron | 25.0% |
| ! | TAGTATTGTTGTAATGCAAA+GGG | + | chr2_1:34528939-34528958 | None:intergenic | 25.0% |
| ! | ATAGTATTGTTGTAATGCAA+AGG | + | chr2_1:34528940-34528959 | None:intergenic | 25.0% |
| ! | GACTGAATATTTACAAAAAC+AGG | - | chr2_1:34528966-34528985 | Msa0206080:intron | 25.0% |
| !!! | AGTTTGTTATTCTTTGCATT+GGG | - | chr2_1:34529001-34529020 | Msa0206080:intron | 25.0% |
| ! | TTGTTGAAACATATCTGAAA+TGG | - | chr2_1:34529639-34529658 | Msa0206080:intron | 25.0% |
| ! | TCTTGAAGAAAACTATGATT+AGG | + | chr2_1:34529695-34529714 | None:intergenic | 25.0% |
| !!! | ATAACTACATCTGTTTCTAA+GGG | + | chr2_1:34529851-34529870 | None:intergenic | 25.0% |
| !!! | AATAACTACATCTGTTTCTA+AGG | + | chr2_1:34529852-34529871 | None:intergenic | 25.0% |
| !! | TTGAACTGTCAATGTAATTT+TGG | + | chr2_1:34529934-34529953 | None:intergenic | 25.0% |
| ! | AAAATTACATTGACAGTTCA+AGG | - | chr2_1:34529933-34529952 | Msa0206080:intron | 25.0% |
| !! | TAGTGGTTTACATATTTTCT+AGG | - | chr2_1:34530362-34530381 | Msa0206080:intron | 25.0% |
| !! | TGATCTCCAATAAAATTTTC+TGG | + | chr2_1:34530632-34530651 | None:intergenic | 25.0% |
| !!! | TTATGATCCTTTTTGTTTAG+AGG | - | chr2_1:34530797-34530816 | Msa0206080:CDS | 25.0% |
| GAAAAAAGAGTTGCAATTGT+TGG | - | chr2_1:34526081-34526100 | Msa0206080:three_prime_UTR | 30.0% | |
| ! | GAAAATTGGTATGCTTGTTT+TGG | + | chr2_1:34526237-34526256 | None:intergenic | 30.0% |
| ! | ACCAATTTTCAGATTTTCCT+TGG | - | chr2_1:34526247-34526266 | Msa0206080:three_prime_UTR | 30.0% |
| ! | CCAATTTTCAGATTTTCCTT+GGG | - | chr2_1:34526248-34526267 | Msa0206080:three_prime_UTR | 30.0% |
| ! | TCTAGAACTTGCTTATTACT+TGG | + | chr2_1:34526297-34526316 | None:intergenic | 30.0% |
| TGATGAAGATATGAAGTCAT+GGG | - | chr2_1:34526407-34526426 | Msa0206080:CDS | 30.0% | |
| ATATGAAGTCATGGGAATTA+TGG | - | chr2_1:34526415-34526434 | Msa0206080:CDS | 30.0% | |
| TACCAAGAATTTCTCAACAA+AGG | - | chr2_1:34526494-34526513 | Msa0206080:CDS | 30.0% | |
| TACCTTTGTTGAGAAATTCT+TGG | + | chr2_1:34526499-34526518 | None:intergenic | 30.0% | |
| ! | ACCACAATAAGATTTTTCTC+TGG | - | chr2_1:34526817-34526836 | Msa0206080:intron | 30.0% |
| ACCAGAGAAAAATCTTATTG+TGG | + | chr2_1:34526821-34526840 | None:intergenic | 30.0% | |
| TTTGTTTCATTCTCACCTAT+GGG | + | chr2_1:34527013-34527032 | None:intergenic | 30.0% | |
| ATAGGTGAGAATGAAACAAA+GGG | - | chr2_1:34527013-34527032 | Msa0206080:intron | 30.0% | |
| CAAAACATCTAATAGAGTTG+GGG | + | chr2_1:34527168-34527187 | None:intergenic | 30.0% | |
| ! | CAAATTCTTAAATTGGTCTC+TGG | + | chr2_1:34527369-34527388 | None:intergenic | 30.0% |
| CAAATGACTTACACTTAACT+TGG | + | chr2_1:34527516-34527535 | None:intergenic | 30.0% | |
| CAAGTTAAGTGTAAGTCATT+TGG | - | chr2_1:34527514-34527533 | Msa0206080:intron | 30.0% | |
| AGTGAAATAATTACTTCCTC+CGG | - | chr2_1:34527918-34527937 | Msa0206080:CDS | 30.0% | |
| CATTCAATAAACGATGTATG+TGG | + | chr2_1:34528012-34528031 | None:intergenic | 30.0% | |
| AGTACCTTGATAGACTTATT+TGG | - | chr2_1:34528082-34528101 | Msa0206080:CDS | 30.0% | |
| AGAACCAAATAAGTCTATCA+AGG | + | chr2_1:34528089-34528108 | None:intergenic | 30.0% | |
| TCATCTGCCACATTAATTTA+TGG | - | chr2_1:34528122-34528141 | Msa0206080:CDS | 30.0% | |
| TTAATTTATGGTCCAACGAT+TGG | - | chr2_1:34528134-34528153 | Msa0206080:intron | 30.0% | |
| ! | CAACTCATAAAATTCAGGTT+GGG | + | chr2_1:34528182-34528201 | None:intergenic | 30.0% |
| AATGCCAACTCATAAAATTC+AGG | + | chr2_1:34528187-34528206 | None:intergenic | 30.0% | |
| !! | TGAATTTTATGAGTTGGCAT+TGG | - | chr2_1:34528186-34528205 | Msa0206080:intron | 30.0% |
| ! | CCGCCGAATATATTAATTTT+TGG | - | chr2_1:34528378-34528397 | Msa0206080:intron | 30.0% |
| TGTCAACCCAAATCTTTAAT+CGG | - | chr2_1:34528635-34528654 | Msa0206080:intron | 30.0% | |
| ACTTGACCGATTAAAGATTT+GGG | + | chr2_1:34528644-34528663 | None:intergenic | 30.0% | |
| TTAAGACTTAATTGCGTGTT+TGG | + | chr2_1:34528807-34528826 | None:intergenic | 30.0% | |
| !! | GAGTTTGTTATTCTTTGCAT+TGG | - | chr2_1:34529000-34529019 | Msa0206080:intron | 30.0% |
| AATAAGAGAGTTACAGTAGT+AGG | - | chr2_1:34529153-34529172 | Msa0206080:intron | 30.0% | |
| TTCAATCCATTAACTTCTAC+AGG | - | chr2_1:34529307-34529326 | Msa0206080:intron | 30.0% | |
| ! | TCTCCTAGATTTCAACATTT+TGG | - | chr2_1:34529375-34529394 | Msa0206080:intron | 30.0% |
| ! | CTCCTAGATTTCAACATTTT+GGG | - | chr2_1:34529376-34529395 | Msa0206080:intron | 30.0% |
| ACTACAATGTATCTTACCAA+TGG | + | chr2_1:34529502-34529521 | None:intergenic | 30.0% | |
| ! | CACTCTAAATTTTCAGAGAT+GGG | - | chr2_1:34529604-34529623 | Msa0206080:intron | 30.0% |
| ! | ACTCTAAATTTTCAGAGATG+GGG | - | chr2_1:34529605-34529624 | Msa0206080:intron | 30.0% |
| GAAATATCTGCATGTCAAAT+TGG | - | chr2_1:34529713-34529732 | Msa0206080:intron | 30.0% | |
| CTTTGTCAAAAAAGGAATCA+GGG | + | chr2_1:34529745-34529764 | None:intergenic | 30.0% | |
| ACTTTGTCAAAAAAGGAATC+AGG | + | chr2_1:34529746-34529765 | None:intergenic | 30.0% | |
| TTGTGATTTCTTTATCTCGA+TGG | + | chr2_1:34529780-34529799 | None:intergenic | 30.0% | |
| !! | GTTTACATATTTTCTAGGAG+TGG | - | chr2_1:34530367-34530386 | Msa0206080:intron | 30.0% |
| ! | ATCCTATCATTGCCAATTTT+GGG | + | chr2_1:34530465-34530484 | None:intergenic | 30.0% |
| ! | TATCCTATCATTGCCAATTT+TGG | + | chr2_1:34530466-34530485 | None:intergenic | 30.0% |
| ATTGCCTAGTATAAAAGTGA+TGG | - | chr2_1:34530564-34530583 | Msa0206080:intron | 30.0% | |
| !! | TTCTCCATCACTTTTATACT+AGG | + | chr2_1:34530571-34530590 | None:intergenic | 30.0% |
| ! | TAGTATAAAAGTGATGGAGA+AGG | - | chr2_1:34530570-34530589 | Msa0206080:intron | 30.0% |
| TGGAGAAGGATGTTAAATTA+TGG | - | chr2_1:34530584-34530603 | Msa0206080:intron | 30.0% | |
| GGAGAAGGATGTTAAATTAT+GGG | - | chr2_1:34530585-34530604 | Msa0206080:intron | 30.0% | |
| ACAAGACCATTATAATCAGT+GGG | + | chr2_1:34530763-34530782 | None:intergenic | 30.0% | |
| AACAAGACCATTATAATCAG+TGG | + | chr2_1:34530764-34530783 | None:intergenic | 30.0% | |
| !! | CAATAGATAGCTTTATCCTT+TGG | - | chr2_1:34530932-34530951 | Msa0206080:CDS | 30.0% |
| ACGAGTCAATAAACTAAGAA+GGG | + | chr2_1:34531060-34531079 | None:intergenic | 30.0% | |
| !! | TTAGTTTATTGACTCGTCTA+TGG | - | chr2_1:34531063-34531082 | Msa0206080:five_prime_UTR | 30.0% |
| TGCAAATATGCTCTACAGAT+TGG | - | chr2_1:34526129-34526148 | Msa0206080:intron | 35.0% | |
| TCATCAGCTTCATATACAAC+AGG | + | chr2_1:34526162-34526181 | None:intergenic | 35.0% | |
| GTTGTATATGAAGCTGATGA+TGG | - | chr2_1:34526162-34526181 | Msa0206080:three_prime_UTR | 35.0% | |
| CCCAAGGAAAATCTGAAAAT+TGG | + | chr2_1:34526251-34526270 | None:intergenic | 35.0% | |
| ! | TCTTTTACAGAAGAATCCCA+AGG | + | chr2_1:34526267-34526286 | None:intergenic | 35.0% |
| CTGATGAAGATATGAAGTCA+TGG | - | chr2_1:34526406-34526425 | Msa0206080:CDS | 35.0% | |
| ! | CTTTGTTTCATTCTCACCTA+TGG | + | chr2_1:34527014-34527033 | None:intergenic | 35.0% |
| CATAGGTGAGAATGAAACAA+AGG | - | chr2_1:34527012-34527031 | Msa0206080:intron | 35.0% | |
| TTGTCAAACGCTTCTCAAAT+TGG | + | chr2_1:34527315-34527334 | None:intergenic | 35.0% | |
| TTGGTTATAATAATGACCGG+AGG | + | chr2_1:34527937-34527956 | None:intergenic | 35.0% | |
| CGTTGGACCATAAATTAATG+TGG | + | chr2_1:34528132-34528151 | None:intergenic | 35.0% | |
| CCAACTCATAAAATTCAGGT+TGG | + | chr2_1:34528183-34528202 | None:intergenic | 35.0% | |
| ! | CCAACCTGAATTTTATGAGT+TGG | - | chr2_1:34528180-34528199 | Msa0206080:intron | 35.0% |
| ! | CCACTCATAAAATTCAGGTT+GGG | + | chr2_1:34528213-34528232 | None:intergenic | 35.0% |
| TTCCAACGTGAATAACGTAA+GGG | + | chr2_1:34528509-34528528 | None:intergenic | 35.0% | |
| ATTCCAACGTGAATAACGTA+AGG | + | chr2_1:34528510-34528529 | None:intergenic | 35.0% | |
| !! | AAGATTTGGGTTGACAATGT+GGG | + | chr2_1:34528631-34528650 | None:intergenic | 35.0% |
| !! | AAAGATTTGGGTTGACAATG+TGG | + | chr2_1:34528632-34528651 | None:intergenic | 35.0% |
| CACTTGACCGATTAAAGATT+TGG | + | chr2_1:34528645-34528664 | None:intergenic | 35.0% | |
| ATCTTTAATCGGTCAAGTGA+CGG | - | chr2_1:34528646-34528665 | Msa0206080:intron | 35.0% | |
| CTTTGCATTGGGAAATATAG+TGG | - | chr2_1:34529012-34529031 | Msa0206080:intron | 35.0% | |
| CCTTACCTGTAAAAACTTCT+GGG | + | chr2_1:34529074-34529093 | None:intergenic | 35.0% | |
| ACCTTACCTGTAAAAACTTC+TGG | + | chr2_1:34529075-34529094 | None:intergenic | 35.0% | |
| AGGTAAGGTTATGCATTCTA+TGG | - | chr2_1:34529086-34529105 | Msa0206080:intron | 35.0% | |
| ! | TTCTATGGATTACTCTTCCT+TGG | - | chr2_1:34529101-34529120 | Msa0206080:intron | 35.0% |
| TTCTATGGATAATCGTGCAA+GGG | + | chr2_1:34529342-34529361 | None:intergenic | 35.0% | |
| TGCCCAAAATGTTGAAATCT+AGG | + | chr2_1:34529381-34529400 | None:intergenic | 35.0% | |
| !! | AACATTTTGGGCATTAGTCT+CGG | - | chr2_1:34529388-34529407 | Msa0206080:intron | 35.0% |
| TCTTACCAATGGTGATAGTA+AGG | + | chr2_1:34529491-34529510 | None:intergenic | 35.0% | |
| ! | GCACTCTAAATTTTCAGAGA+TGG | - | chr2_1:34529603-34529622 | Msa0206080:intron | 35.0% |
| ATTCTTGCCACAGGATATAA+AGG | - | chr2_1:34529869-34529888 | Msa0206080:intron | 35.0% | |
| GTTCAAGGATTTCTCTCTAT+AGG | - | chr2_1:34529948-34529967 | Msa0206080:intron | 35.0% | |
| ! | GGTGGTTTACTCAAGAATTT+TGG | + | chr2_1:34530110-34530129 | None:intergenic | 35.0% |
| TACAAAGGCAGAGATCAAAT+TGG | + | chr2_1:34530131-34530150 | None:intergenic | 35.0% | |
| TACAGTAGTGACCAATTTAG+TGG | - | chr2_1:34530345-34530364 | Msa0206080:intron | 35.0% | |
| AATCTATGGTAAACCACTAC+AGG | - | chr2_1:34530419-34530438 | Msa0206080:intron | 35.0% | |
| GATGTATTATTTGCCTGTAG+TGG | + | chr2_1:34530435-34530454 | None:intergenic | 35.0% | |
| ATCCCAAAATTGGCAATGAT+AGG | - | chr2_1:34530460-34530479 | Msa0206080:intron | 35.0% | |
| CTAATGAAATGAGATGCCAA+TGG | - | chr2_1:34530512-34530531 | Msa0206080:intron | 35.0% | |
| CTAGAAAATGTGCTAACCAT+TGG | + | chr2_1:34530531-34530550 | None:intergenic | 35.0% | |
| ! | TGGTTAGCACATTTTCTAGA+TGG | - | chr2_1:34530532-34530551 | Msa0206080:intron | 35.0% |
| ! | AGATCATGCATTGTTACTTG+TGG | - | chr2_1:34530646-34530665 | Msa0206080:CDS | 35.0% |
| TAGCACACCTCTAAACAAAA+AGG | + | chr2_1:34530807-34530826 | None:intergenic | 35.0% | |
| TCAGCAGAATACATGGTAAT+TGG | - | chr2_1:34530844-34530863 | Msa0206080:CDS | 35.0% | |
| CAGAATACATGGTAATTGGA+GGG | - | chr2_1:34530848-34530867 | Msa0206080:CDS | 35.0% | |
| AGAATACATGGTAATTGGAG+GGG | - | chr2_1:34530849-34530868 | Msa0206080:CDS | 35.0% | |
| GACGAGTCAATAAACTAAGA+AGG | + | chr2_1:34531061-34531080 | None:intergenic | 35.0% | |
| TGATGAACTCAGATAGATGC+AGG | + | chr2_1:34526018-34526037 | None:intergenic | 40.0% | |
| GAGCATATTTGCAAGCAAGT+AGG | + | chr2_1:34526122-34526141 | None:intergenic | 40.0% | |
| !! | TATGAAGCTGATGATGGTGT+TGG | - | chr2_1:34526168-34526187 | Msa0206080:three_prime_UTR | 40.0% |
| !!! | GGTATGCTTGTTTTGGGTTT+TGG | + | chr2_1:34526230-34526249 | None:intergenic | 40.0% |
| AAGTCATGGGAATTATGGAG+TGG | - | chr2_1:34526420-34526439 | Msa0206080:CDS | 40.0% | |
| TGGGAATTATGGAGTGGTAA+TGG | - | chr2_1:34526426-34526445 | Msa0206080:CDS | 40.0% | |
| !!! | AGTGGTAATGGATGTCCTTT+TGG | - | chr2_1:34526438-34526457 | Msa0206080:CDS | 40.0% |
| TGTAATATGCCATGTTCCCT+TGG | + | chr2_1:34526466-34526485 | None:intergenic | 40.0% | |
| GTGAGAATGAAACAAAGGGA+TGG | - | chr2_1:34527017-34527036 | Msa0206080:intron | 40.0% | |
| !! | AGAAGCGTTTGACAAAGACA+TGG | - | chr2_1:34527320-34527339 | Msa0206080:CDS | 40.0% |
| AATAATGAGTTAGTGACCGG+AGG | - | chr2_1:34528058-34528077 | Msa0206080:CDS | 40.0% | |
| ATAATGAGTTAGTGACCGGA+GGG | - | chr2_1:34528059-34528078 | Msa0206080:CDS | 40.0% | |
| ! | CCCAACCTGAATTTTATGAG+TGG | - | chr2_1:34528179-34528198 | Msa0206080:intron | 40.0% |
| GCCACTCATAAAATTCAGGT+TGG | + | chr2_1:34528214-34528233 | None:intergenic | 40.0% | |
| GACAGCCACTCATAAAATTC+AGG | + | chr2_1:34528218-34528237 | None:intergenic | 40.0% | |
| !! | TTTGCTCAGACTAGTTTGCT+CGG | - | chr2_1:34528243-34528262 | Msa0206080:intron | 40.0% |
| ATCCCTTACGTTATTCACGT+TGG | - | chr2_1:34528504-34528523 | Msa0206080:intron | 40.0% | |
| CTCAATATCATGTTGCGGAA+TGG | + | chr2_1:34528541-34528560 | None:intergenic | 40.0% | |
| ! | AAAGGCCCAGAAGTTTTTAC+AGG | - | chr2_1:34529066-34529085 | Msa0206080:intron | 40.0% |
| ! | CCCAGAAGTTTTTACAGGTA+AGG | - | chr2_1:34529071-34529090 | Msa0206080:intron | 40.0% |
| ! | AGCAGCATTTTCTTTGTCCA+AGG | + | chr2_1:34529121-34529140 | None:intergenic | 40.0% |
| GTGACTCCTGTAGAAGTTAA+TGG | + | chr2_1:34529316-34529335 | None:intergenic | 40.0% | |
| GTTCTATGGATAATCGTGCA+AGG | + | chr2_1:34529343-34529362 | None:intergenic | 40.0% | |
| !!! | GAACTTTTAGTTCACAAGCC+CGG | - | chr2_1:34529436-34529455 | Msa0206080:intron | 40.0% |
| TACCAATGGTGATAGTAAGG+TGG | + | chr2_1:34529488-34529507 | None:intergenic | 40.0% | |
| AAGTTGCCACTGAAGAAGTA+TGG | - | chr2_1:34529662-34529681 | Msa0206080:intron | 40.0% | |
| ACTAGTCCATACTTCTTCAG+TGG | + | chr2_1:34529671-34529690 | None:intergenic | 40.0% | |
| ! | AGCTTTAGCTTCTGCAAAGA+AGG | - | chr2_1:34529800-34529819 | Msa0206080:intron | 40.0% |
| GATGTAGTTATTCTTGCCAC+AGG | - | chr2_1:34529860-34529879 | Msa0206080:intron | 40.0% | |
| TTGGTCACCTTTATATCCTG+TGG | + | chr2_1:34529879-34529898 | None:intergenic | 40.0% | |
| AAAGGCAGAGATCAAATTGG+TGG | + | chr2_1:34530128-34530147 | None:intergenic | 40.0% | |
| GCAATGATAGGATATGCTGA+GGG | - | chr2_1:34530472-34530491 | Msa0206080:intron | 40.0% | |
| ! | GCATTGTTACTTGTGGCATA+TGG | - | chr2_1:34530653-34530672 | Msa0206080:CDS | 40.0% |
| TGTAATCCGAGGAGAAAGAA+GGG | - | chr2_1:34530706-34530725 | Msa0206080:CDS | 40.0% | |
| AAAAGACCCTTCTTTCTCCT+CGG | + | chr2_1:34530715-34530734 | None:intergenic | 40.0% | |
| ! | GAGAAAGAAGGGTCTTTTTG+CGG | - | chr2_1:34530717-34530736 | Msa0206080:CDS | 40.0% |
| CGGAGCTATTTGAACCATAT+GGG | - | chr2_1:34530737-34530756 | Msa0206080:CDS | 40.0% | |
| TTATAATCAGTGGGCCCATA+TGG | + | chr2_1:34530754-34530773 | None:intergenic | 40.0% | |
| ! | TATGGGCCCACTGATTATAA+TGG | - | chr2_1:34530754-34530773 | Msa0206080:CDS | 40.0% |
| TCTCACTTCAGCAGAATACA+TGG | - | chr2_1:34530837-34530856 | Msa0206080:CDS | 40.0% | |
| GCAGAATACATGGTAATTGG+AGG | - | chr2_1:34530847-34530866 | Msa0206080:CDS | 40.0% | |
| AGAGTTGCAATTGTTGGTGC+AGG | - | chr2_1:34526087-34526106 | Msa0206080:three_prime_UTR | 45.0% | |
| ATTGTTGGTGCAGGAATCAG+TGG | - | chr2_1:34526096-34526115 | Msa0206080:three_prime_UTR | 45.0% | |
| ! | ATGATGGTGTTGGAGGACTA+TGG | - | chr2_1:34526178-34526197 | Msa0206080:three_prime_UTR | 45.0% |
| GGGAACATGGCATATTACAG+TGG | - | chr2_1:34526467-34526486 | Msa0206080:CDS | 45.0% | |
| ! | AGCAACCGAGTTCTCCTTTT+CGG | - | chr2_1:34526980-34526999 | Msa0206080:intron | 45.0% |
| GGTATCACTATAACGGTCGT+CGG | + | chr2_1:34527457-34527476 | None:intergenic | 45.0% | |
| TTATGGTCCAACGATTGGTG+TGG | - | chr2_1:34528139-34528158 | Msa0206080:intron | 45.0% | |
| TAATGCACCACACCAATCGT+TGG | + | chr2_1:34528149-34528168 | None:intergenic | 45.0% | |
| ACGATTGGTGTGGTGCATTA+TGG | - | chr2_1:34528149-34528168 | Msa0206080:intron | 45.0% | |
| !! | ATTTGGGTTGACAATGTGGG+TGG | + | chr2_1:34528628-34528647 | None:intergenic | 45.0% |
| ! | AAACTTCTGGGCCTTTTCCA+GGG | + | chr2_1:34529062-34529081 | None:intergenic | 45.0% |
| ! | AAAACTTCTGGGCCTTTTCC+AGG | + | chr2_1:34529063-34529082 | None:intergenic | 45.0% |
| AGAGTTACAGTAGTAGGCTC+AGG | - | chr2_1:34529159-34529178 | Msa0206080:intron | 45.0% | |
| ACCATTTGCATCTGCGCATT+CGG | + | chr2_1:34529208-34529227 | None:intergenic | 45.0% | |
| !! | ACACTTCCTTCTTGGCCTTT+TGG | - | chr2_1:34529462-34529481 | Msa0206080:intron | 45.0% |
| GTGATAGTAAGGTGGCCAAA+AGG | + | chr2_1:34529480-34529499 | None:intergenic | 45.0% | |
| ACATCCTCGCATCCCAAAAT+TGG | - | chr2_1:34530450-34530469 | Msa0206080:intron | 45.0% | |
| !!! | ATTGCCAATTTTGGGATGCG+AGG | + | chr2_1:34530457-34530476 | None:intergenic | 45.0% |
| GGCAATGATAGGATATGCTG+AGG | - | chr2_1:34530471-34530490 | Msa0206080:intron | 45.0% | |
| GAGACATGAAGTGTAATCCG+AGG | - | chr2_1:34530695-34530714 | Msa0206080:CDS | 45.0% | |
| GTGTAATCCGAGGAGAAAGA+AGG | - | chr2_1:34530705-34530724 | Msa0206080:CDS | 45.0% | |
| GCGGAGCTATTTGAACCATA+TGG | - | chr2_1:34530736-34530755 | Msa0206080:CDS | 45.0% | |
| ! | ATGGTAATTGGAGGGGTACA+TGG | - | chr2_1:34530856-34530875 | Msa0206080:CDS | 45.0% |
| ! | TAGAGAAAGCACAACACTCG+TGG | - | chr2_1:34530886-34530905 | Msa0206080:CDS | 45.0% |
| !!! | AAGTAAAAAATTTAATTTTA+TGG | + | chr2_1:34527478-34527497 | None:intergenic | 5.0% |
| !! | GAAGCTGATGATGGTGTTGG+AGG | - | chr2_1:34526171-34526190 | Msa0206080:three_prime_UTR | 50.0% |
| ! | ATGGTGTTGGAGGACTATGG+AGG | - | chr2_1:34526181-34526200 | Msa0206080:three_prime_UTR | 50.0% |
| !!! | TGGATGTCCTTTTGGCTCCA+AGG | - | chr2_1:34526446-34526465 | Msa0206080:CDS | 50.0% |
| !!! | GGATGTCCTTTTGGCTCCAA+GGG | - | chr2_1:34526447-34526466 | Msa0206080:CDS | 50.0% |
| CATGTTCCCTTGGAGCCAAA+AGG | + | chr2_1:34526456-34526475 | None:intergenic | 50.0% | |
| !!! | CTTTTGGCTCCAAGGGAACA+TGG | - | chr2_1:34526454-34526473 | Msa0206080:CDS | 50.0% |
| ! | AACCGAGTTCTCCTTTTCGG+TGG | - | chr2_1:34526983-34527002 | Msa0206080:intron | 50.0% |
| ! | GTCTATCAAGGTACTCCCTC+CGG | + | chr2_1:34528077-34528096 | None:intergenic | 50.0% |
| GGTGTGGTGCATTATGGCAT+TGG | - | chr2_1:34528155-34528174 | Msa0206080:intron | 50.0% | |
| GGGAGGAACTCAGGAATGTT+TGG | + | chr2_1:34529042-34529061 | None:intergenic | 50.0% | |
| AACATTCCTGAGTTCCTCCC+TGG | - | chr2_1:34529042-34529061 | Msa0206080:intron | 50.0% | |
| TTATCCATAGAACTGCGCGC+TGG | - | chr2_1:34529350-34529369 | Msa0206080:intron | 50.0% | |
| !! | CCAAGAAGGAAGTGTTCTCC+GGG | + | chr2_1:34529457-34529476 | None:intergenic | 50.0% |
| !! | GCCAAGAAGGAAGTGTTCTC+CGG | + | chr2_1:34529458-34529477 | None:intergenic | 50.0% |
| GGCCACCTTACTATCACCAT+TGG | - | chr2_1:34529483-34529502 | Msa0206080:intron | 50.0% | |
| CGCCACCGAAAAGGAGAACT+CGG | + | chr2_1:34526988-34527007 | None:intergenic | 55.0% | |
| CTATGGGAACGCCACCGAAA+AGG | + | chr2_1:34526997-34527016 | None:intergenic | 55.0% | |
| ! | CTTTTCGGTGGCGTTCCCAT+AGG | - | chr2_1:34526995-34527014 | Msa0206080:intron | 55.0% |
| ! | TGGGTTGACAATGTGGGTGG+TGG | + | chr2_1:34528625-34528644 | None:intergenic | 55.0% |
| ! | CCTTTTCCAGGGAGGAACTC+AGG | + | chr2_1:34529051-34529070 | None:intergenic | 55.0% |
| CCTGAGTTCCTCCCTGGAAA+AGG | - | chr2_1:34529048-34529067 | Msa0206080:intron | 55.0% | |
| GCCGAATGCGCAGATGCAAA+TGG | - | chr2_1:34529204-34529223 | Msa0206080:intron | 55.0% | |
| GAAACCAGCGCGCAGTTCTA+TGG | + | chr2_1:34529357-34529376 | None:intergenic | 55.0% | |
| CCCGGAGAACACTTCCTTCT+TGG | - | chr2_1:34529454-34529473 | Msa0206080:intron | 55.0% | |
| AGGTGGCCAAAAGGCCAAGA+AGG | + | chr2_1:34529471-34529490 | None:intergenic | 55.0% | |
| ! | CTTCTGGGCCTTTTCCAGGG+AGG | + | chr2_1:34529059-34529078 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 34525998 | 34531134 | 34525998 | ID=Msa0206080;Name=Msa0206080 |
| chr2_1 | mRNA | 34525998 | 34531134 | 34525998 | ID=Msa0206080-mRNA-1;Parent=Msa0206080;Name=Msa0206080-mRNA-1;_AED=0.04;_eAED=0.04;_QI=80|1|1|1|0.8|0.66|6|309|517 |
| chr2_1 | exon | 34525998 | 34526124 | 34525998 | ID=Msa0206080-mRNA-1:exon:11587;Parent=Msa0206080-mRNA-1 |
| chr2_1 | exon | 34526158 | 34526691 | 34526158 | ID=Msa0206080-mRNA-1:exon:11586;Parent=Msa0206080-mRNA-1 |
| chr2_1 | exon | 34527163 | 34527512 | 34527163 | ID=Msa0206080-mRNA-1:exon:11585;Parent=Msa0206080-mRNA-1 |
| chr2_1 | exon | 34527628 | 34527803 | 34527628 | ID=Msa0206080-mRNA-1:exon:11584;Parent=Msa0206080-mRNA-1 |
| chr2_1 | exon | 34527907 | 34528144 | 34527907 | ID=Msa0206080-mRNA-1:exon:11583;Parent=Msa0206080-mRNA-1 |
| chr2_1 | exon | 34530617 | 34531134 | 34530617 | ID=Msa0206080-mRNA-1:exon:11582;Parent=Msa0206080-mRNA-1 |
| chr2_1 | five_prime_UTR | 34531055 | 34531134 | 34531055 | ID=Msa0206080-mRNA-1:five_prime_utr;Parent=Msa0206080-mRNA-1 |
| chr2_1 | CDS | 34530617 | 34531054 | 34530617 | ID=Msa0206080-mRNA-1:cds;Parent=Msa0206080-mRNA-1 |
| chr2_1 | CDS | 34527907 | 34528144 | 34527907 | ID=Msa0206080-mRNA-1:cds;Parent=Msa0206080-mRNA-1 |
| chr2_1 | CDS | 34527628 | 34527803 | 34527628 | ID=Msa0206080-mRNA-1:cds;Parent=Msa0206080-mRNA-1 |
| chr2_1 | CDS | 34527163 | 34527512 | 34527163 | ID=Msa0206080-mRNA-1:cds;Parent=Msa0206080-mRNA-1 |
| chr2_1 | CDS | 34526340 | 34526691 | 34526340 | ID=Msa0206080-mRNA-1:cds;Parent=Msa0206080-mRNA-1 |
| chr2_1 | three_prime_UTR | 34526158 | 34526339 | 34526158 | ID=Msa0206080-mRNA-1:three_prime_utr;Parent=Msa0206080-mRNA-1 |
| chr2_1 | three_prime_UTR | 34525998 | 34526124 | 34525998 | ID=Msa0206080-mRNA-1:three_prime_utr;Parent=Msa0206080-mRNA-1 |
| Gene Sequence |
| Protein sequence |
