Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0206120 | XP_024631713.2 | 83.030 | 495 | 38 | 1 | 30 | 478 | 23 | 517 | 0.0 | 816 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0206120 | sp|Q9LMA1|FMO1_ARATH | 36.290 | 496 | 251 | 10 | 34 | 473 | 33 | 519 | 2.40e-103 | 321 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0206120 | A0A396J7C8 | 83.030 | 495 | 38 | 1 | 30 | 478 | 23 | 517 | 0.0 | 816 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003470 | Msa0206120 | 0.808347 | 3.238354e-50 | -8.615850e-47 |
| Msa0056040 | Msa0206120 | 0.807583 | 4.708359e-50 | -8.615850e-47 |
| Msa0070990 | Msa0206120 | 0.804231 | 2.385889e-49 | -8.615850e-47 |
| Msa0094420 | Msa0206120 | 0.806251 | 9.009228e-50 | -8.615850e-47 |
| Msa0206080 | Msa0206120 | 0.912122 | 2.793793e-83 | -8.615850e-47 |
| Msa0206120 | Msa0206130 | 0.911864 | 3.751675e-83 | -8.615850e-47 |
| Msa0206120 | Msa0206160 | 0.920612 | 1.026377e-87 | -8.615850e-47 |
| Msa0206120 | Msa0206180 | 0.863661 | 2.122673e-64 | -8.615850e-47 |
| Msa0206120 | Msa0206190 | 0.912060 | 2.999634e-83 | -8.615850e-47 |
| Msa0206120 | Msa0212370 | 0.804466 | 2.131708e-49 | -8.615850e-47 |
| Msa0206120 | Msa0249270 | 0.893047 | 9.039909e-75 | -8.615850e-47 |
| Msa0206120 | Msa0291040 | 0.802582 | 5.238549e-49 | -8.615850e-47 |
| Msa0206120 | Msa0306130 | 0.822658 | 2.105997e-53 | -8.615850e-47 |
| Msa0206120 | Msa0326260 | 0.883315 | 4.979988e-71 | -8.615850e-47 |
| Msa0206120 | Msa0326270 | 0.905689 | 3.292900e-80 | -8.615850e-47 |
| Msa0206120 | Msa0326280 | 0.829759 | 4.301047e-55 | -8.615850e-47 |
| Msa0206120 | Msa0358230 | 0.817421 | 3.327517e-52 | -8.615850e-47 |
| Msa0206120 | Msa0361260 | 0.810175 | 1.313516e-50 | -8.615850e-47 |
| Msa0206120 | Msa0370600 | 0.820676 | 6.049576e-53 | -8.615850e-47 |
| Msa0206120 | Msa0380060 | 0.812050 | 5.151551e-51 | -8.615850e-47 |
| Msa0206120 | Msa0382290 | 0.807400 | 5.150038e-50 | -8.615850e-47 |
| Msa0206120 | Msa0408640 | 0.807097 | 5.969972e-50 | -8.615850e-47 |
| Msa0206120 | Msa0418200 | 0.817756 | 2.796416e-52 | -8.615850e-47 |
| Msa0206120 | Msa0418480 | 0.816029 | 6.827554e-52 | -8.615850e-47 |
| Msa0206120 | Msa0420070 | 0.808829 | 2.554842e-50 | -8.615850e-47 |
| Msa0206120 | Msa0436450 | 0.802052 | 6.736040e-49 | -8.615850e-47 |
| Msa0206120 | Msa0464540 | 0.806635 | 7.475739e-50 | -8.615850e-47 |
| Msa0206120 | Msa0465860 | 0.822757 | 1.996524e-53 | -8.615850e-47 |
| Msa0206120 | Msa0482580 | 0.813339 | 2.690637e-51 | -8.615850e-47 |
| Msa0206120 | Msa0510230 | 0.831785 | 1.370613e-55 | -8.615850e-47 |
| Msa0206120 | Msa0519200 | 0.829298 | 5.566430e-55 | -8.615850e-47 |
| Msa0206120 | Msa0524210 | 0.804741 | 1.867306e-49 | -8.615850e-47 |
| Msa0206120 | Msa0537270 | 0.801786 | 7.640184e-49 | -8.615850e-47 |
| Msa0206120 | Msa0543850 | 0.836427 | 9.420367e-57 | -8.615850e-47 |
| Msa0206120 | Msa0547050 | 0.843606 | 1.263646e-58 | -8.615850e-47 |
| Msa0206120 | Msa0593710 | 0.810731 | 9.962000e-51 | -8.615850e-47 |
| Msa0206120 | Msa0594390 | 0.802467 | 5.532426e-49 | -8.615850e-47 |
| Msa0206120 | Msa0599690 | 0.820162 | 7.933206e-53 | -8.615850e-47 |
| Msa0206120 | Msa0601780 | 0.832620 | 8.520923e-56 | -8.615850e-47 |
| Msa0206120 | Msa0614230 | 0.806769 | 7.004587e-50 | -8.615850e-47 |
| Msa0206120 | Msa0640880 | 0.802543 | 5.336705e-49 | -8.615850e-47 |
| Msa0206120 | Msa0642650 | 0.805498 | 1.296725e-49 | -8.615850e-47 |
| Msa0206120 | Msa0642910 | 0.817348 | 3.454572e-52 | -8.615850e-47 |
| Msa0206120 | Msa0662850 | 0.807533 | 4.825120e-50 | -8.615850e-47 |
| Msa0206120 | Msa0665910 | -0.811955 | 5.404459e-51 | -8.615850e-47 |
| Msa0206120 | Msa0678890 | 0.840840 | 6.823187e-58 | -8.615850e-47 |
| Msa0206120 | Msa0681890 | 0.813075 | 3.075848e-51 | -8.615850e-47 |
| Msa0206120 | Msa0700910 | 0.820662 | 6.092306e-53 | -8.615850e-47 |
| Msa0206120 | Msa0722940 | 0.812500 | 4.109282e-51 | -8.615850e-47 |
| Msa0206120 | Msa0723150 | 0.808969 | 2.384508e-50 | -8.615850e-47 |
| Msa0206120 | Msa0739570 | 0.830329 | 3.122103e-55 | -8.615850e-47 |
| Msa0206120 | Msa0782330 | 0.826145 | 3.185834e-54 | -8.615850e-47 |
| Msa0206120 | Msa0802500 | 0.807474 | 4.966170e-50 | -8.615850e-47 |
| Msa0206120 | Msa0820670 | 0.813624 | 2.329229e-51 | -8.615850e-47 |
| Msa0206120 | Msa0843290 | 0.807318 | 5.359167e-50 | -8.615850e-47 |
| Msa0206120 | Msa0860270 | 0.812797 | 3.538989e-51 | -8.615850e-47 |
| Msa0206120 | Msa0951460 | 0.821551 | 3.802008e-53 | -8.615850e-47 |
| Msa0206120 | Msa0951960 | 0.815661 | 8.244971e-52 | -8.615850e-47 |
| Msa0206120 | Msa0958020 | 0.819038 | 1.432306e-52 | -8.615850e-47 |
| Msa0206120 | Msa0992590 | 0.801887 | 7.284894e-49 | -8.615850e-47 |
| Msa0206120 | Msa1002040 | 0.809180 | 2.149293e-50 | -8.615850e-47 |
| Msa0206120 | Msa1014270 | 0.804244 | 2.370873e-49 | -8.615850e-47 |
| Msa0206120 | Msa1027790 | 0.802335 | 5.890003e-49 | -8.615850e-47 |
| Msa0206120 | Msa1030280 | 0.804315 | 2.291824e-49 | -8.615850e-47 |
| Msa0206120 | Msa1055260 | 0.807433 | 5.067208e-50 | -8.615850e-47 |
| Msa0206120 | Msa1055280 | 0.803728 | 3.035127e-49 | -8.615850e-47 |
| Msa0206120 | Msa1112610 | 0.811943 | 5.437024e-51 | -8.615850e-47 |
| Msa0206120 | Msa1157160 | 0.806364 | 8.525771e-50 | -8.615850e-47 |
| Msa0206120 | Msa1200920 | 0.805921 | 1.056838e-49 | -8.615850e-47 |
| Msa0206120 | Msa1215210 | 0.809478 | 1.854730e-50 | -8.615850e-47 |
| Msa0206120 | Msa1254170 | 0.810692 | 1.015586e-50 | -8.615850e-47 |
| Msa0206120 | Msa1254190 | 0.800727 | 1.258116e-48 | -8.615850e-47 |
| Msa0206120 | Msa1302170 | 0.814290 | 1.661382e-51 | -8.615850e-47 |
| Msa0206120 | Msa1355400 | 0.824452 | 8.011943e-54 | -8.615850e-47 |
| Msa0206120 | Msa1365020 | 0.812510 | 4.089044e-51 | -8.615850e-47 |
| Msa0206120 | Msa1367410 | 0.807450 | 5.025799e-50 | -8.615850e-47 |
| Msa0206120 | Msa1379980 | 0.801038 | 1.086916e-48 | -8.615850e-47 |
| Msa0206120 | Msa1417650 | 0.805788 | 1.126904e-49 | -8.615850e-47 |
| Msa0206120 | Msa1421810 | 0.822928 | 1.821782e-53 | -8.615850e-47 |
| Msa0206120 | Msa1422750 | 0.807461 | 4.997122e-50 | -8.615850e-47 |
| Msa0206120 | Msa1434020 | 0.808087 | 3.680056e-50 | -8.615850e-47 |
| Msa0206120 | Msa1435050 | 0.826035 | 3.382590e-54 | -8.615850e-47 |
| Msa0206120 | Msa1439670 | 0.811072 | 8.404157e-51 | -8.615850e-47 |
| Msa0206120 | Msa1439680 | 0.802297 | 5.997410e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0206120 | MtrunA17_Chr2g0304721 | 83.030 | 495 | 38 | 1 | 30 | 478 | 23 | 517 | 0.0 | 816 |
| Msa0206120 | MtrunA17_Chr2g0305211 | 70.800 | 500 | 97 | 2 | 28 | 478 | 21 | 520 | 0.0 | 730 |
| Msa0206120 | MtrunA17_Chr2g0305231 | 70.800 | 500 | 97 | 2 | 28 | 478 | 21 | 520 | 0.0 | 730 |
| Msa0206120 | MtrunA17_Chr2g0304651 | 70.080 | 498 | 98 | 3 | 30 | 478 | 23 | 518 | 0.0 | 695 |
| Msa0206120 | MtrunA17_Chr2g0301661 | 35.234 | 491 | 263 | 8 | 33 | 472 | 33 | 519 | 4.46e-98 | 305 |
| Msa0206120 | MtrunA17_Chr4g0070101 | 35.714 | 490 | 258 | 9 | 34 | 472 | 36 | 519 | 2.25e-97 | 303 |
| Msa0206120 | MtrunA17_Chr2g0301471 | 36.049 | 491 | 259 | 8 | 33 | 472 | 33 | 519 | 2.21e-96 | 300 |
| Msa0206120 | MtrunA17_Chr4g0070111 | 40.780 | 282 | 162 | 4 | 194 | 473 | 1 | 279 | 1.83e-68 | 220 |
| Msa0206120 | MtrunA17_Chr4g0070121 | 39.355 | 155 | 93 | 1 | 34 | 187 | 36 | 190 | 1.36e-32 | 124 |
| Msa0206120 | MtrunA17_Chr2g0286701 | 35.897 | 156 | 98 | 2 | 33 | 187 | 33 | 187 | 4.79e-28 | 113 |
| Msa0206120 | MtrunA17_Chr2g0286681 | 41.584 | 101 | 58 | 1 | 249 | 349 | 19 | 118 | 7.11e-23 | 93.6 |
| Msa0206120 | MtrunA17_Chr2g0286671 | 39.604 | 101 | 60 | 1 | 372 | 472 | 1 | 100 | 2.14e-18 | 80.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0206120 | AT1G19250.1 | 36.290 | 496 | 251 | 10 | 34 | 473 | 33 | 519 | 2.44e-104 | 321 |
| Msa0206120 | AT5G45180.1 | 34.545 | 440 | 255 | 14 | 34 | 453 | 33 | 459 | 1.32e-77 | 250 |
Find 111 sgRNAs with CRISPR-Local
Find 370 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGTTATAACATATTGTTTA+TGG | 0.095585 | 2_1:-34750067 | Msa0206120:three_prime_UTR |
| TTGAACTGTCAATGTAATTT+TGG | 0.131877 | 2_1:+34751458 | None:intergenic |
| AATAACTACATCTGTTTCTA+AGG | 0.224263 | 2_1:+34751540 | None:intergenic |
| TTAGTTTATCGACTCGTTTA+TGG | 0.224340 | 2_1:-34750104 | Msa0206120:three_prime_UTR |
| CCCATGGAAAATCTGAAAAT+TGG | 0.228440 | 2_1:+34756434 | None:intergenic |
| CCCGGAGAACACTTCCTTCT+TGG | 0.233331 | 2_1:-34751962 | Msa0206120:CDS |
| ACACTTCCTTCTTGGCCTTT+TGG | 0.237410 | 2_1:-34751954 | Msa0206120:CDS |
| CAATATACAGCTTTATCTTT+TGG | 0.254235 | 2_1:-34750198 | Msa0206120:three_prime_UTR |
| TGGAGAAGGATGTTAAATTA+TGG | 0.260934 | 2_1:-34750542 | Msa0206120:CDS |
| ATGCTCAAAATGTTGAAATC+TGG | 0.294095 | 2_1:+34752037 | None:intergenic |
| GAAATATCTGCATGTCAAAT+TGG | 0.294249 | 2_1:-34751676 | Msa0206120:CDS |
| TACCTTTGTTGAGAAATTCT+TGG | 0.304695 | 2_1:+34756186 | None:intergenic |
| AGTGGTAATGGCAGTAGTTT+TGG | 0.313462 | 2_1:-34756244 | Msa0206120:CDS |
| ATATGAAGTCATGGGAATTA+TGG | 0.316758 | 2_1:-34756267 | Msa0206120:CDS |
| GCGGAGCTATTTGAACCATA+TGG | 0.339270 | 2_1:-34750390 | Msa0206120:CDS |
| AAAATTACATTGACAGTTCA+AGG | 0.349499 | 2_1:-34751456 | Msa0206120:CDS |
| TCTTGAAGAAAACTATGATT+AGG | 0.356221 | 2_1:+34751697 | None:intergenic |
| CTTTGCATTGGGAAATATAG+TGG | 0.362241 | 2_1:-34752436 | Msa0206120:CDS |
| ATTCTTGCCACAGGATATAA+AGG | 0.366577 | 2_1:-34751520 | Msa0206120:CDS |
| TAGCACACCTCTAAACAAAA+AGG | 0.384966 | 2_1:+34750322 | None:intergenic |
| TCTACAACTTGCTTATTACT+TGG | 0.392477 | 2_1:+34756388 | None:intergenic |
| TTGACCGGCAGGGGTGGATC+TGG | 0.393906 | 2_1:+34756592 | None:intergenic |
| GGGAGGAACTCAGGAATGTT+TGG | 0.394469 | 2_1:+34752409 | None:intergenic |
| GGAGAAGGATGTTAAATTAT+GGG | 0.394999 | 2_1:-34750541 | Msa0206120:CDS |
| GCCAAGAAGGAAGTGTTCTC+CGG | 0.407386 | 2_1:+34751961 | None:intergenic |
| TTGGAATTGAATCTTATGTA+AGG | 0.408337 | 2_1:+34756328 | None:intergenic |
| AAGTTGCCACTGAAGAAGTA+TGG | 0.417922 | 2_1:-34751727 | Msa0206120:CDS |
| CGGAGCTATTTGAACCATAT+GGG | 0.422701 | 2_1:-34750389 | Msa0206120:CDS |
| TTGTTGAAACATATCTGAAA+TGG | 0.425780 | 2_1:-34751750 | Msa0206120:CDS |
| ATAATCTATATCAATGACTT+TGG | 0.427553 | 2_1:+34756309 | None:intergenic |
| GCATTTACTTTATTTCAGAT+TGG | 0.429429 | 2_1:-34756553 | Msa0206120:CDS |
| AGCTTTAGCTTCTGCAAAGA+AGG | 0.430511 | 2_1:-34751589 | Msa0206120:CDS |
| TGCTCAAAATGTTGAAATCT+GGG | 0.432035 | 2_1:+34752038 | None:intergenic |
| TTATAATCAGTGGGCCCATA+TGG | 0.433595 | 2_1:+34750375 | None:intergenic |
| TGTAATATGCCACGTTCCCT+TGG | 0.436758 | 2_1:+34756219 | None:intergenic |
| GCATTGTTACTTGTGGCATA+TGG | 0.438868 | 2_1:-34750473 | Msa0206120:CDS |
| GAATCTTATGTAAGGAATGA+TGG | 0.442345 | 2_1:+34756336 | None:intergenic |
| CCCTGCCGGTCAATGGTCAT+TGG | 0.444689 | 2_1:-34756582 | Msa0206120:CDS |
| ATGATGGTGTTGGAGGACTA+TGG | 0.447006 | 2_1:-34756504 | Msa0206120:CDS |
| AGTTTGTTATTCTTTGCATT+GGG | 0.451815 | 2_1:-34752447 | Msa0206120:CDS |
| GTTCAAGGATTTCTCTCTAC+AGG | 0.451911 | 2_1:-34751441 | Msa0206120:intron |
| ATCCTATCATTGCCAATTGT+GGG | 0.453863 | 2_1:+34750664 | None:intergenic |
| GGCCACTTTACTTTCACCAT+TGG | 0.455226 | 2_1:-34751933 | Msa0206120:intron |
| ACATCCTCGCATCCCACAAT+TGG | 0.460278 | 2_1:-34750676 | Msa0206120:CDS |
| GAGTTTGTTATTCTTTGCAT+TGG | 0.462117 | 2_1:-34752448 | Msa0206120:CDS |
| TTGTGATTTCTTTATCTCGA+TGG | 0.463038 | 2_1:+34751612 | None:intergenic |
| AACATTCCTGAGTTCCTCCC+TGG | 0.466304 | 2_1:-34752406 | Msa0206120:CDS |
| CCTGAGTTCCTCCCTGGAAA+AGG | 0.469202 | 2_1:-34752400 | Msa0206120:CDS |
| GATCCACCCCTGCCGGTCAA+TGG | 0.469932 | 2_1:-34756589 | Msa0206120:CDS |
| TTTATGGTAATGTTTAATGA+TGG | 0.480787 | 2_1:-34750051 | Msa0206120:three_prime_UTR |
| TATGGGCCCACTGATTATAA+TGG | 0.482729 | 2_1:-34750372 | Msa0206120:CDS |
| TTGGTCACCTTTATATCCTG+TGG | 0.488352 | 2_1:+34751513 | None:intergenic |
| TATCCTATCATTGCCAATTG+TGG | 0.493186 | 2_1:+34750663 | None:intergenic |
| ACCAATGACCATTGACCGGC+AGG | 0.494325 | 2_1:+34756581 | None:intergenic |
| TCATCAGCTTCATATACAAC+AGG | 0.497177 | 2_1:+34756523 | None:intergenic |
| GTCATTGATATAGATTATGT+TGG | 0.502491 | 2_1:-34756304 | Msa0206120:CDS |
| AACAAGACCATTATAATCAG+TGG | 0.502752 | 2_1:+34750365 | None:intergenic |
| ATCTGGACTCACAATATTAG+TGG | 0.503487 | 2_1:+34756609 | None:intergenic |
| ATCCCACAATTGGCAATGAT+AGG | 0.504586 | 2_1:-34750666 | Msa0206120:CDS |
| AAAAGACCCTTCTTTCTCCT+CGG | 0.506769 | 2_1:+34750414 | None:intergenic |
| CTAGAAAATGTGCTAACCAT+TGG | 0.509768 | 2_1:+34750598 | None:intergenic |
| ATACATGTTGGAGGGGTACA+TGG | 0.515133 | 2_1:-34750274 | Msa0206120:three_prime_UTR |
| TGGGAATTATGGAGTGGTAA+TGG | 0.517223 | 2_1:-34756256 | Msa0206120:CDS |
| GTGAAAGTAAAGTGGCCAAA+AGG | 0.517743 | 2_1:+34751939 | None:intergenic |
| AACGAGTCGATAAACTAAGA+AGG | 0.519750 | 2_1:+34750109 | None:intergenic |
| AAGTGGCCAAAAGGCCAAGA+AGG | 0.525815 | 2_1:+34751948 | None:intergenic |
| TGACCATTGACCGGCAGGGG+TGG | 0.527987 | 2_1:+34756586 | None:intergenic |
| GATGTAGTTATTCTTGCCAC+AGG | 0.531258 | 2_1:-34751529 | Msa0206120:CDS |
| GAGTCCAGATCCACCCCTGC+CGG | 0.532951 | 2_1:-34756596 | Msa0206120:CDS |
| CTGATGAAGATATGAAGTCA+TGG | 0.535713 | 2_1:-34756276 | Msa0206120:CDS |
| CAATGACCATTGACCGGCAG+GGG | 0.540958 | 2_1:+34756583 | None:intergenic |
| GTTCTATTTATAATCGTGCA+AGG | 0.542558 | 2_1:+34752076 | None:intergenic |
| TATGAAGCTGATGATGGTGT+TGG | 0.543117 | 2_1:-34756514 | Msa0206120:CDS |
| CCAAGAAGGAAGTGTTCTCC+GGG | 0.546254 | 2_1:+34751962 | None:intergenic |
| ATAACTACATCTGTTTCTAA+GGG | 0.546830 | 2_1:+34751541 | None:intergenic |
| TGGAAAATCTGAAAATTGGT+AGG | 0.551236 | 2_1:+34756438 | None:intergenic |
| GTGTAATCCGAGGAGAAAGA+AGG | 0.551929 | 2_1:-34750421 | Msa0206120:CDS |
| AGAGAAAGCACAACACTAGT+GGG | 0.552143 | 2_1:-34750243 | Msa0206120:three_prime_UTR |
| TCTGGACTCACAATATTAGT+GGG | 0.552475 | 2_1:+34756610 | None:intergenic |
| GTTGTATATGAAGCTGATGA+TGG | 0.564559 | 2_1:-34756520 | Msa0206120:CDS |
| CACTTCAGCAGAATACATGT+TGG | 0.565258 | 2_1:-34750286 | Msa0206120:three_prime_UTR |
| GAAGCTGATGATGGTGTTGG+AGG | 0.565452 | 2_1:-34756511 | Msa0206120:CDS |
| ATTGCCTAGTATAAAAGTGA+TGG | 0.568840 | 2_1:-34750562 | Msa0206120:CDS |
| TTGAACCAATGACCATTGAC+CGG | 0.573374 | 2_1:+34756577 | None:intergenic |
| TACCAATGGTGAAAGTAAAG+TGG | 0.578127 | 2_1:+34751931 | None:intergenic |
| TACCAAGAATTTCTCAACAA+AGG | 0.578314 | 2_1:-34756188 | Msa0206120:intron |
| TTCAGCAGAATACATGTTGG+AGG | 0.581199 | 2_1:-34750283 | Msa0206120:three_prime_UTR |
| ACGAGTCGATAAACTAAGAA+GGG | 0.584873 | 2_1:+34750110 | None:intergenic |
| TGATGAAGATATGAAGTCAT+GGG | 0.593792 | 2_1:-34756275 | Msa0206120:CDS |
| GGCAATGATAGGATATGCTG+AGG | 0.603017 | 2_1:-34750655 | Msa0206120:CDS |
| AGATCATGCATTGTTACTTG+TGG | 0.603581 | 2_1:-34750480 | Msa0206120:CDS |
| TCAGCAGAATACATGTTGGA+GGG | 0.608166 | 2_1:-34750282 | Msa0206120:three_prime_UTR |
| TAGAGAAAGCACAACACTAG+TGG | 0.616354 | 2_1:-34750244 | Msa0206120:three_prime_UTR |
| TTCTATTTATAATCGTGCAA+GGG | 0.618260 | 2_1:+34752077 | None:intergenic |
| TAGTATAAAAGTGATGGAGA+AGG | 0.619337 | 2_1:-34750556 | Msa0206120:CDS |
| TATGTTATAACATAAACAGA+AGG | 0.627898 | 2_1:+34750077 | None:intergenic |
| CCAATGACCATTGACCGGCA+GGG | 0.631758 | 2_1:+34756582 | None:intergenic |
| ACAAGACCATTATAATCAGT+GGG | 0.632491 | 2_1:+34750366 | None:intergenic |
| TGTAATCCGAGGAGAAAGAA+GGG | 0.645189 | 2_1:-34750420 | Msa0206120:CDS |
| ACTAGTCCATACTTCTTCAG+TGG | 0.645916 | 2_1:+34751721 | None:intergenic |
| GAGACATGAAGTGTAATCCG+AGG | 0.647245 | 2_1:-34750431 | Msa0206120:CDS |
| CTAATGAAATGAGATGCCAA+TGG | 0.660576 | 2_1:-34750614 | Msa0206120:CDS |
| TTATAAATAGAACTTCACAC+TGG | 0.667245 | 2_1:-34752066 | Msa0206120:CDS |
| AAGTCATGGGAATTATGGAG+TGG | 0.671476 | 2_1:-34756262 | Msa0206120:CDS |
| CAGCAGAATACATGTTGGAG+GGG | 0.676165 | 2_1:-34750281 | Msa0206120:three_prime_UTR |
| ATTGCCAATTGTGGGATGCG+AGG | 0.681590 | 2_1:+34750672 | None:intergenic |
| CTGGACTCACAATATTAGTG+GGG | 0.697501 | 2_1:+34756611 | None:intergenic |
| GAGAAAGCACAACACTAGTG+GGG | 0.701035 | 2_1:-34750242 | Msa0206120:three_prime_UTR |
| GCAATGATAGGATATGCTGA+GGG | 0.702690 | 2_1:-34750654 | Msa0206120:CDS |
| GGGAACGTGGCATATTACAG+TGG | 0.714918 | 2_1:-34756215 | Msa0206120:CDS |
| ATGGTGTTGGAGGACTATGG+AGG | 0.798552 | 2_1:-34756501 | Msa0206120:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAAAATAAAATTTAATTTT+CGG | - | chr2_1:34751493-34751512 | Msa0206120:CDS | 0.0% |
| !! | TATATATATATATATATATA+TGG | - | chr2_1:34753532-34753551 | Msa0206120:intron | 0.0% |
| !! | ATATATATATATATATATAT+GGG | - | chr2_1:34753533-34753552 | Msa0206120:intron | 0.0% |
| !! | TATATTTGCATATTAAAAAA+TGG | + | chr2_1:34751120-34751139 | None:intergenic | 10.0% |
| !!! | TTATTTTAGTTAACATTAAT+TGG | - | chr2_1:34751357-34751376 | Msa0206120:intron | 10.0% |
| !!! | TATTTTAGTTAACATTAATT+GGG | - | chr2_1:34751358-34751377 | Msa0206120:intron | 10.0% |
| !! | AAAAAAAATTAAAGTTGTAT+TGG | - | chr2_1:34752707-34752726 | Msa0206120:intron | 10.0% |
| !!! | TGAATATTGATATTTTTTTA+AGG | - | chr2_1:34753492-34753511 | Msa0206120:intron | 10.0% |
| !!! | TGAATATTGATATTTTTTTA+AGG | - | chr2_1:34753492-34753511 | Msa0206120:intron | 10.0% |
| !! | TCTTACAAAAATATATAAAT+TGG | + | chr2_1:34754828-34754847 | None:intergenic | 10.0% |
| !! | ATCTTTCAAATATATATATA+GGG | + | chr2_1:34755536-34755555 | None:intergenic | 10.0% |
| !! | AATCTTTCAAATATATATAT+AGG | + | chr2_1:34755537-34755556 | None:intergenic | 10.0% |
| !! | ATATATATTTGAAAGATTAA+CGG | - | chr2_1:34755539-34755558 | Msa0206120:intron | 10.0% |
| !!! | TTCATATTTCATTTTCTTTT+TGG | - | chr2_1:34750533-34750552 | Msa0206120:CDS | 15.0% |
| !! | AGATATAAATAAAGGAAATA+TGG | - | chr2_1:34750631-34750650 | Msa0206120:CDS | 15.0% |
| !! | TGATTAAAATTGTGTATTTA+TGG | - | chr2_1:34750844-34750863 | Msa0206120:intron | 15.0% |
| !! | AAAATTGTATGTATTAGTAT+CGG | - | chr2_1:34751456-34751475 | Msa0206120:CDS | 15.0% |
| !! | TTAGTTGAATTATAAGATTA+AGG | - | chr2_1:34751725-34751744 | Msa0206120:CDS | 15.0% |
| !! | TACAAAAGTTAGTATATTAA+TGG | + | chr2_1:34751785-34751804 | None:intergenic | 15.0% |
| !! | AAATTTAACTCATTAATTGT+CGG | - | chr2_1:34751912-34751931 | Msa0206120:intron | 15.0% |
| !! | AAAAATCAATGTGATTATTT+GGG | + | chr2_1:34752056-34752075 | None:intergenic | 15.0% |
| !! | TAAAAATCAATGTGATTATT+TGG | + | chr2_1:34752057-34752076 | None:intergenic | 15.0% |
| !! | AAATGAAATGAAATAATCAT+TGG | - | chr2_1:34752584-34752603 | Msa0206120:intron | 15.0% |
| !!! | CATTTTGAAACAAATTTTTT+TGG | - | chr2_1:34752747-34752766 | Msa0206120:intron | 15.0% |
| !! | AATTTAGGCTTATTAAAATA+TGG | + | chr2_1:34753132-34753151 | None:intergenic | 15.0% |
| !!! | TAAAATATGTTTTGAAAAAG+TGG | + | chr2_1:34753223-34753242 | None:intergenic | 15.0% |
| !! | ATTATAATGTTAGTTATCTT+TGG | - | chr2_1:34753243-34753262 | Msa0206120:intron | 15.0% |
| !!! | ACTAAGGATTTTTTTTTTAA+AGG | - | chr2_1:34753320-34753339 | Msa0206120:intron | 15.0% |
| !! | TACACTAATATCTATATATA+TGG | - | chr2_1:34753430-34753449 | Msa0206120:intron | 15.0% |
| !!! | AAAAAAAATCTTGATAATTG+TGG | - | chr2_1:34753715-34753734 | Msa0206120:intron | 15.0% |
| !!! | TATTTTTGATATGTATTTGT+AGG | + | chr2_1:34755309-34755328 | None:intergenic | 15.0% |
| !!! | AATATTCCAGAAAATTTTAT+TGG | - | chr2_1:34756163-34756182 | Msa0206120:intron | 15.0% |
| !! | ATGTTATAACATATTGTTTA+TGG | - | chr2_1:34756599-34756618 | Msa0206120:CDS | 15.0% |
| !! | ATAATCTATATCAATGACTT+TGG | + | chr2_1:34750360-34750379 | None:intergenic | 20.0% |
| !! | TTTCATAATTACAAATGTGT+TGG | - | chr2_1:34750560-34750579 | Msa0206120:CDS | 20.0% |
| !! | AACGTTAGAGATATAAATAA+AGG | - | chr2_1:34750623-34750642 | Msa0206120:CDS | 20.0% |
| !!! | GTTACGAGATTTTTTTTTTT+AGG | + | chr2_1:34750802-34750821 | None:intergenic | 20.0% |
| !! | TTGATAAAGTATAACACTAA+CGG | + | chr2_1:34751283-34751302 | None:intergenic | 20.0% |
| !! | TAACATTAATTGGGAAATAT+TGG | - | chr2_1:34751367-34751386 | Msa0206120:intron | 20.0% |
| !! | AACATTAATTGGGAAATATT+GGG | - | chr2_1:34751368-34751387 | Msa0206120:intron | 20.0% |
| !! | ATCTTAAATTTATACGTATC+AGG | + | chr2_1:34751429-34751448 | None:intergenic | 20.0% |
| !! | GAATTATAAGATTAAGGTTA+AGG | - | chr2_1:34751731-34751750 | Msa0206120:CDS | 20.0% |
| !!! | GTGTTGTTATTTAATTTAGT+AGG | + | chr2_1:34752388-34752407 | None:intergenic | 20.0% |
| !!! | TCAATTGACTTTTGATTATT+AGG | + | chr2_1:34752410-34752429 | None:intergenic | 20.0% |
| !!! | TGTCTTTTTCTAATAAAGTA+AGG | + | chr2_1:34752633-34752652 | None:intergenic | 20.0% |
| !! | GTATAATAATAGGCATAAAT+TGG | - | chr2_1:34752801-34752820 | Msa0206120:intron | 20.0% |
| !! | AAGCATATCACAATTTATTA+AGG | - | chr2_1:34752987-34753006 | Msa0206120:intron | 20.0% |
| !! | TAAGACAAAATTAACATTAG+AGG | + | chr2_1:34753470-34753489 | None:intergenic | 20.0% |
| !! | TGAAAATTGAATATATTCTG+CGG | + | chr2_1:34754002-34754021 | None:intergenic | 20.0% |
| !! | AATTATTGTTGTATTGCAAA+GGG | + | chr2_1:34754157-34754176 | None:intergenic | 20.0% |
| !! | AAATTATTGTTGTATTGCAA+AGG | + | chr2_1:34754158-34754177 | None:intergenic | 20.0% |
| !!! | TTCTTTTACTTTGTCAAAAA+AGG | + | chr2_1:34755030-34755049 | None:intergenic | 20.0% |
| !!! | TTTTTTGACAAAGTAAAAGA+AGG | - | chr2_1:34755029-34755048 | Msa0206120:intron | 20.0% |
| !!! | TGAATATGCTTTTAAGTTTT+TGG | + | chr2_1:34755175-34755194 | None:intergenic | 20.0% |
| !!! | TCAATGTAATTTTGGAATAT+TGG | + | chr2_1:34755203-34755222 | None:intergenic | 20.0% |
| !! | CAAATCATACATAAGAAAAT+AGG | + | chr2_1:34755284-34755303 | None:intergenic | 20.0% |
| !!! | CTATTTTCTTATGTATGATT+TGG | - | chr2_1:34755282-34755301 | Msa0206120:intron | 20.0% |
| !!! | TTTGAAATATTAATAGAGTC+AGG | + | chr2_1:34755628-34755647 | None:intergenic | 20.0% |
| !! | TAAAATATTAATAGAGTCAG+AGG | - | chr2_1:34755860-34755879 | Msa0206120:intron | 20.0% |
| !! | TATGTTATAACATAAACAGA+AGG | + | chr2_1:34756592-34756611 | None:intergenic | 20.0% |
| !!! | TTTATGGTAATGTTTAATGA+TGG | - | chr2_1:34756615-34756634 | Msa0206120:CDS | 20.0% |
| !! | GCATTTACTTTATTTCAGAT+TGG | - | chr2_1:34750113-34750132 | Msa0206120:three_prime_UTR | 25.0% |
| ! | TTGGAATTGAATCTTATGTA+AGG | + | chr2_1:34750341-34750360 | None:intergenic | 25.0% |
| ! | GTCATTGATATAGATTATGT+TGG | - | chr2_1:34750362-34750381 | Msa0206120:CDS | 25.0% |
| !! | TCTCGAGTAAAACTATATTT+TGG | + | chr2_1:34750695-34750714 | None:intergenic | 25.0% |
| ! | AAACAGAAGAAATCAATCAT+AGG | - | chr2_1:34751145-34751164 | Msa0206120:intron | 25.0% |
| ! | ACATTAATTGGGAAATATTG+GGG | - | chr2_1:34751369-34751388 | Msa0206120:intron | 25.0% |
| ! | ACGATAATAAAACAAAGAGA+TGG | - | chr2_1:34751578-34751597 | Msa0206120:CDS | 25.0% |
| ! | TTATGGTATTACAGTCATAA+TGG | + | chr2_1:34751656-34751675 | None:intergenic | 25.0% |
| ! | GAAAATGACATAGAAATGAA+GGG | + | chr2_1:34751942-34751961 | None:intergenic | 25.0% |
| ! | AGAAAATGACATAGAAATGA+AGG | + | chr2_1:34751943-34751962 | None:intergenic | 25.0% |
| ! | ATCATAGTCTTTATAGACAA+AGG | - | chr2_1:34752178-34752197 | Msa0206120:intron | 25.0% |
| ! | ATTGTATGCTACTAAAACAA+AGG | + | chr2_1:34752246-34752265 | None:intergenic | 25.0% |
| !!! | AAGTAACACTCATTTTGAAA+CGG | - | chr2_1:34752773-34752792 | Msa0206120:intron | 25.0% |
| ! | AAAATAAGTCAATCCAAAGT+GGG | + | chr2_1:34753013-34753032 | None:intergenic | 25.0% |
| ! | ATAATGTTAGTTATCTTTGG+CGG | - | chr2_1:34753246-34753265 | Msa0206120:intron | 25.0% |
| !! | CTTACATAAATTGAAGTGTT+TGG | + | chr2_1:34753813-34753832 | None:intergenic | 25.0% |
| ! | ACTTATACGCTATTTATGTT+TGG | + | chr2_1:34753855-34753874 | None:intergenic | 25.0% |
| ! | ATATAAGCTGTTTATCCAAA+CGG | - | chr2_1:34753930-34753949 | Msa0206120:intron | 25.0% |
| ! | AAAATTGAATATATTCTGCG+GGG | + | chr2_1:34754000-34754019 | None:intergenic | 25.0% |
| ! | GAAAATTGAATATATTCTGC+GGG | + | chr2_1:34754001-34754020 | None:intergenic | 25.0% |
| ! | AAGATATTAACATGCAATCA+CGG | - | chr2_1:34754119-34754138 | Msa0206120:intron | 25.0% |
| !!! | AGTTTGTTATTCTTTGCATT+GGG | - | chr2_1:34754219-34754238 | Msa0206120:intron | 25.0% |
| ! | TTCAATCCATTAATTTCTAC+AGG | - | chr2_1:34754557-34754576 | Msa0206120:intron | 25.0% |
| ! | TTCTATTTATAATCGTGCAA+GGG | + | chr2_1:34754592-34754611 | None:intergenic | 25.0% |
| ! | TTATAAATAGAACTTCACAC+TGG | - | chr2_1:34754600-34754619 | Msa0206120:intron | 25.0% |
| !! | CAATCTAAATTTTCAGAGAT+GGG | - | chr2_1:34754881-34754900 | Msa0206120:intron | 25.0% |
| !! | AATCTAAATTTTCAGAGATG+GGG | - | chr2_1:34754882-34754901 | Msa0206120:intron | 25.0% |
| ! | TTGTTGAAACATATCTGAAA+TGG | - | chr2_1:34754916-34754935 | Msa0206120:intron | 25.0% |
| ! | TCTTGAAGAAAACTATGATT+AGG | + | chr2_1:34754972-34754991 | None:intergenic | 25.0% |
| !!! | ATAACTACATCTGTTTCTAA+GGG | + | chr2_1:34755128-34755147 | None:intergenic | 25.0% |
| !!! | AATAACTACATCTGTTTCTA+AGG | + | chr2_1:34755129-34755148 | None:intergenic | 25.0% |
| !! | TTGAACTGTCAATGTAATTT+TGG | + | chr2_1:34755211-34755230 | None:intergenic | 25.0% |
| ! | AAAATTACATTGACAGTTCA+AGG | - | chr2_1:34755210-34755229 | Msa0206120:intron | 25.0% |
| !! | CTATAAAACACCTTTTATGA+AGG | + | chr2_1:34755508-34755527 | None:intergenic | 25.0% |
| !! | TGAGAAACTTTTGACAAAAA+CGG | - | chr2_1:34755725-34755744 | Msa0206120:intron | 25.0% |
| ! | AAATTCTCTATACTAATCCA+TGG | - | chr2_1:34755945-34755964 | Msa0206120:intron | 25.0% |
| !! | TGATCTCCAATAAAATTTTC+TGG | + | chr2_1:34756172-34756191 | None:intergenic | 25.0% |
| !!! | TTATGATCCTTTTTGTTTAG+AGG | - | chr2_1:34756337-34756356 | Msa0206120:CDS | 25.0% |
| !!! | CAATATACAGCTTTATCTTT+TGG | - | chr2_1:34756468-34756487 | Msa0206120:CDS | 25.0% |
| ! | AAAATTGGTAGGCATGTTTT+CGG | + | chr2_1:34750220-34750239 | None:intergenic | 30.0% |
| TGGAAAATCTGAAAATTGGT+AGG | + | chr2_1:34750231-34750250 | None:intergenic | 30.0% | |
| ! | ACCAATTTTCAGATTTTCCA+TGG | - | chr2_1:34750231-34750250 | Msa0206120:three_prime_UTR | 30.0% |
| ! | CCAATTTTCAGATTTTCCAT+GGG | - | chr2_1:34750232-34750251 | Msa0206120:three_prime_UTR | 30.0% |
| ! | TCTACAACTTGCTTATTACT+TGG | + | chr2_1:34750281-34750300 | None:intergenic | 30.0% |
| GAATCTTATGTAAGGAATGA+TGG | + | chr2_1:34750333-34750352 | None:intergenic | 30.0% | |
| TGATGAAGATATGAAGTCAT+GGG | - | chr2_1:34750391-34750410 | Msa0206120:CDS | 30.0% | |
| ATATGAAGTCATGGGAATTA+TGG | - | chr2_1:34750399-34750418 | Msa0206120:CDS | 30.0% | |
| TACCAAGAATTTCTCAACAA+AGG | - | chr2_1:34750478-34750497 | Msa0206120:CDS | 30.0% | |
| TACCTTTGTTGAGAAATTCT+TGG | + | chr2_1:34750483-34750502 | None:intergenic | 30.0% | |
| AAATTAAGATACGATACGAC+TGG | - | chr2_1:34751044-34751063 | Msa0206120:intron | 30.0% | |
| AATTAAGATACGATACGACT+GGG | - | chr2_1:34751045-34751064 | Msa0206120:intron | 30.0% | |
| !!! | AGTACAGATGTGTTCTTTTT+TGG | + | chr2_1:34751326-34751345 | None:intergenic | 30.0% |
| TATCGGTGCATGATAATTAT+CGG | - | chr2_1:34751396-34751415 | Msa0206120:intron | 30.0% | |
| TCATCTGCCACATTAATTTA+TGG | - | chr2_1:34751815-34751834 | Msa0206120:intron | 30.0% | |
| ATTAATTTATGGTCCACAGA+TGG | - | chr2_1:34751826-34751845 | Msa0206120:intron | 30.0% | |
| ATAGACAAAGGAAAAAGATC+TGG | - | chr2_1:34752190-34752209 | Msa0206120:intron | 30.0% | |
| ! | TCTAACTTCTCCTTTTCTTT+TGG | + | chr2_1:34752216-34752235 | None:intergenic | 30.0% |
| ATTTGCAAAATGCTTAGACA+TGG | - | chr2_1:34752275-34752294 | Msa0206120:intron | 30.0% | |
| ! | ACATCAATTCGACATGTTTT+TGG | - | chr2_1:34752352-34752371 | Msa0206120:intron | 30.0% |
| CAAAATAAGTCAATCCAAAG+TGG | + | chr2_1:34753014-34753033 | None:intergenic | 30.0% | |
| !!! | TGACTTATTTTGAGCTTATG+TGG | - | chr2_1:34753022-34753041 | Msa0206120:intron | 30.0% |
| !!! | GACTTATTTTGAGCTTATGT+GGG | - | chr2_1:34753023-34753042 | Msa0206120:intron | 30.0% |
| ! | ACACCTTTAAAAAGGCTTAT+GGG | + | chr2_1:34753059-34753078 | None:intergenic | 30.0% |
| ! | AACACCTTTAAAAAGGCTTA+TGG | + | chr2_1:34753060-34753079 | None:intergenic | 30.0% |
| !!! | TAAGCCTTTTTAAAGGTGTT+TGG | - | chr2_1:34753060-34753079 | Msa0206120:intron | 30.0% |
| !!! | AAGCCTTTTTAAAGGTGTTT+GGG | - | chr2_1:34753061-34753080 | Msa0206120:intron | 30.0% |
| ! | TTACCCAAACACCTTTAAAA+AGG | + | chr2_1:34753067-34753086 | None:intergenic | 30.0% |
| TAAAGTAACACACGTAACTA+AGG | - | chr2_1:34753304-34753323 | Msa0206120:intron | 30.0% | |
| TATAGATGCTTATGGCATTA+GGG | + | chr2_1:34753913-34753932 | None:intergenic | 30.0% | |
| ATATAGATGCTTATGGCATT+AGG | + | chr2_1:34753914-34753933 | None:intergenic | 30.0% | |
| ACAGCTTATATAGATGCTTA+TGG | + | chr2_1:34753921-34753940 | None:intergenic | 30.0% | |
| TATAAGCTGTTTATCCAAAC+GGG | - | chr2_1:34753931-34753950 | Msa0206120:intron | 30.0% | |
| GACTGAATGTTTACAATAAC+AGG | - | chr2_1:34754184-34754203 | Msa0206120:intron | 30.0% | |
| !! | GAGTTTGTTATTCTTTGCAT+TGG | - | chr2_1:34754218-34754237 | Msa0206120:intron | 30.0% |
| AATAAGAGAGTTACAGTAGT+AGG | - | chr2_1:34754372-34754391 | Msa0206120:intron | 30.0% | |
| ! | ATCATTCAAGAAGTGTAACT+AGG | + | chr2_1:34754521-34754540 | None:intergenic | 30.0% |
| GTGATTCCTGTAGAAATTAA+TGG | + | chr2_1:34754566-34754585 | None:intergenic | 30.0% | |
| GTTCTATTTATAATCGTGCA+AGG | + | chr2_1:34754593-34754612 | None:intergenic | 30.0% | |
| TGCTCAAAATGTTGAAATCT+GGG | + | chr2_1:34754631-34754650 | None:intergenic | 30.0% | |
| ATGCTCAAAATGTTGAAATC+TGG | + | chr2_1:34754632-34754651 | None:intergenic | 30.0% | |
| GTATCTTACATTCTTACCAA+TGG | + | chr2_1:34754752-34754771 | None:intergenic | 30.0% | |
| ! | GCAATCTAAATTTTCAGAGA+TGG | - | chr2_1:34754880-34754899 | Msa0206120:intron | 30.0% |
| GAAATATCTGCATGTCAAAT+TGG | - | chr2_1:34754990-34755009 | Msa0206120:intron | 30.0% | |
| CTTTGTCAAAAAAGGAATCA+GGG | + | chr2_1:34755022-34755041 | None:intergenic | 30.0% | |
| ACTTTGTCAAAAAAGGAATC+AGG | + | chr2_1:34755023-34755042 | None:intergenic | 30.0% | |
| TTGTGATTTCTTTATCTCGA+TGG | + | chr2_1:34755057-34755076 | None:intergenic | 30.0% | |
| GCAAAGTTACAACTAAAAAG+CGG | + | chr2_1:34755476-34755495 | None:intergenic | 30.0% | |
| CTAAAAGACACCTTCATAAA+AGG | - | chr2_1:34755495-34755514 | Msa0206120:intron | 30.0% | |
| AATTTGAGAGTGACTTACAA+AGG | + | chr2_1:34755601-34755620 | None:intergenic | 30.0% | |
| !! | TATGTTTTTGTCACATGACA+AGG | - | chr2_1:34755694-34755713 | Msa0206120:intron | 30.0% |
| ! | AGAAACTTTTGACAAAGACA+AGG | - | chr2_1:34755830-34755849 | Msa0206120:intron | 30.0% |
| ATTGCCTAGTATAAAAGTGA+TGG | - | chr2_1:34756104-34756123 | Msa0206120:intron | 30.0% | |
| !! | TTCTCCATCACTTTTATACT+AGG | + | chr2_1:34756111-34756130 | None:intergenic | 30.0% |
| ! | TAGTATAAAAGTGATGGAGA+AGG | - | chr2_1:34756110-34756129 | Msa0206120:intron | 30.0% |
| TGGAGAAGGATGTTAAATTA+TGG | - | chr2_1:34756124-34756143 | Msa0206120:intron | 30.0% | |
| GGAGAAGGATGTTAAATTAT+GGG | - | chr2_1:34756125-34756144 | Msa0206120:intron | 30.0% | |
| ACAAGACCATTATAATCAGT+GGG | + | chr2_1:34756303-34756322 | None:intergenic | 30.0% | |
| AACAAGACCATTATAATCAG+TGG | + | chr2_1:34756304-34756323 | None:intergenic | 30.0% | |
| !! | TTAGTTTATCGACTCGTTTA+TGG | - | chr2_1:34756562-34756581 | Msa0206120:CDS | 30.0% |
| TCTGGACTCACAATATTAGT+GGG | + | chr2_1:34750059-34750078 | None:intergenic | 35.0% | |
| ATCTGGACTCACAATATTAG+TGG | + | chr2_1:34750060-34750079 | None:intergenic | 35.0% | |
| TCATCAGCTTCATATACAAC+AGG | + | chr2_1:34750146-34750165 | None:intergenic | 35.0% | |
| GTTGTATATGAAGCTGATGA+TGG | - | chr2_1:34750146-34750165 | Msa0206120:three_prime_UTR | 35.0% | |
| CCCATGGAAAATCTGAAAAT+TGG | + | chr2_1:34750235-34750254 | None:intergenic | 35.0% | |
| ! | TCTTTTACAGAAGAATCCCA+TGG | + | chr2_1:34750251-34750270 | None:intergenic | 35.0% |
| CTGATGAAGATATGAAGTCA+TGG | - | chr2_1:34750390-34750409 | Msa0206120:CDS | 35.0% | |
| TTCACAGATTATCACCTATG+GGG | + | chr2_1:34750959-34750978 | None:intergenic | 35.0% | |
| CTTCACAGATTATCACCTAT+GGG | + | chr2_1:34750960-34750979 | None:intergenic | 35.0% | |
| TCCGTATCATATTTCGTATC+CGG | + | chr2_1:34750984-34751003 | None:intergenic | 35.0% | |
| !! | ATTTTACCGTATCGACGTAT+CGG | + | chr2_1:34751019-34751038 | None:intergenic | 35.0% |
| CGGATATAGTATAACACTGA+TGG | + | chr2_1:34751263-34751282 | None:intergenic | 35.0% | |
| !!! | TTGGATTCGTGCTTCTTTTT+TGG | + | chr2_1:34751307-34751326 | None:intergenic | 35.0% |
| CTGTGGACCATAAATTAATG+TGG | + | chr2_1:34751825-34751844 | None:intergenic | 35.0% | |
| AAAGATCTGGCCAAAAGAAA+AGG | - | chr2_1:34752203-34752222 | Msa0206120:intron | 35.0% | |
| AGAAAAGGAGAAGTTAGAGA+AGG | - | chr2_1:34752218-34752237 | Msa0206120:intron | 35.0% | |
| !! | TTAGACATGGATTGATTCGT+TGG | - | chr2_1:34752288-34752307 | Msa0206120:intron | 35.0% |
| !! | TAGACATGGATTGATTCGTT+GGG | - | chr2_1:34752289-34752308 | Msa0206120:intron | 35.0% |
| AGCAATTGAACTATCTACCT+TGG | - | chr2_1:34752324-34752343 | Msa0206120:intron | 35.0% | |
| ATTGAACTATCTACCTTGGT+TGG | - | chr2_1:34752328-34752347 | Msa0206120:intron | 35.0% | |
| AAGACAGTGCAAATAGCAAT+AGG | - | chr2_1:34752433-34752452 | Msa0206120:CDS | 35.0% | |
| TGGTGCAAAAGGAAAAATTG+AGG | - | chr2_1:34752486-34752505 | Msa0206120:intron | 35.0% | |
| !! | AAGCGACACTCATTTTGAAA+CGG | + | chr2_1:34752541-34752560 | None:intergenic | 35.0% |
| !! | TTCAAAATGAGTGTCGCTTT+AGG | - | chr2_1:34752542-34752561 | Msa0206120:intron | 35.0% |
| TTGTGAGAGAAAAGTTTGAG+AGG | - | chr2_1:34752674-34752693 | Msa0206120:intron | 35.0% | |
| TGTGAGAGAAAAGTTTGAGA+GGG | - | chr2_1:34752675-34752694 | Msa0206120:intron | 35.0% | |
| AAAGTTTGAGAGGGTAAAGT+TGG | - | chr2_1:34752684-34752703 | Msa0206120:intron | 35.0% | |
| !!! | TAACACTCATTTTGAAACGG+AGG | - | chr2_1:34752776-34752795 | Msa0206120:intron | 35.0% |
| !!! | AACACTCATTTTGAAACGGA+GGG | - | chr2_1:34752777-34752796 | Msa0206120:intron | 35.0% |
| ! | AACGGAGGGAGTATAATAAT+AGG | - | chr2_1:34752791-34752810 | Msa0206120:intron | 35.0% |
| ! | CCACTCATAAAATTCAGGTT+GGG | + | chr2_1:34752889-34752908 | None:intergenic | 35.0% |
| CAATTTATTAAGGCCCACTT+TGG | - | chr2_1:34752997-34753016 | Msa0206120:intron | 35.0% | |
| ! | ACTCCCATAAGCCTTTTTAA+AGG | - | chr2_1:34753053-34753072 | Msa0206120:intron | 35.0% |
| ! | TAAATTTTCAGCTTACCCTC+CGG | - | chr2_1:34753146-34753165 | Msa0206120:intron | 35.0% |
| ATAAGCTGTTTATCCAAACG+GGG | - | chr2_1:34753932-34753951 | Msa0206120:intron | 35.0% | |
| CTTTGCATTGGGAAATATAG+TGG | - | chr2_1:34754230-34754249 | Msa0206120:intron | 35.0% | |
| CCTTACCTGTAAAAACTTCT+GGG | + | chr2_1:34754292-34754311 | None:intergenic | 35.0% | |
| ACCTTACCTGTAAAAACTTC+TGG | + | chr2_1:34754293-34754312 | None:intergenic | 35.0% | |
| GGTAAGGTTTATGCATTCTA+TGG | - | chr2_1:34754305-34754324 | Msa0206120:intron | 35.0% | |
| ! | AACATTTTGAGCATTCGTCT+CGG | - | chr2_1:34754638-34754657 | Msa0206120:intron | 35.0% |
| TACCAATGGTGAAAGTAAAG+TGG | + | chr2_1:34754738-34754757 | None:intergenic | 35.0% | |
| ATTCTTGCCACAGGATATAA+AGG | - | chr2_1:34755146-34755165 | Msa0206120:intron | 35.0% | |
| TTGCTAAAAGACACCTTCAA+GGG | + | chr2_1:34755431-34755450 | None:intergenic | 35.0% | |
| ATTGCTAAAAGACACCTTCA+AGG | + | chr2_1:34755432-34755451 | None:intergenic | 35.0% | |
| ! | GGTGGTTTACTCAAGTATTT+TGG | + | chr2_1:34755565-34755584 | None:intergenic | 35.0% |
| TACAAAGGCAAGGATCAAAT+TGG | + | chr2_1:34755586-34755605 | None:intergenic | 35.0% | |
| ATATGTGTAAACCACCAAAC+TGG | + | chr2_1:34755917-34755936 | None:intergenic | 35.0% | |
| GATGTATTATTTGCCTGTAG+TGG | + | chr2_1:34755975-34755994 | None:intergenic | 35.0% | |
| ATCCTATCATTGCCAATTGT+GGG | + | chr2_1:34756005-34756024 | None:intergenic | 35.0% | |
| TATCCTATCATTGCCAATTG+TGG | + | chr2_1:34756006-34756025 | None:intergenic | 35.0% | |
| CTAATGAAATGAGATGCCAA+TGG | - | chr2_1:34756052-34756071 | Msa0206120:intron | 35.0% | |
| CTAGAAAATGTGCTAACCAT+TGG | + | chr2_1:34756071-34756090 | None:intergenic | 35.0% | |
| ! | TGGTTAGCACATTTTCTAGA+TGG | - | chr2_1:34756072-34756091 | Msa0206120:intron | 35.0% |
| ! | AGATCATGCATTGTTACTTG+TGG | - | chr2_1:34756186-34756205 | Msa0206120:intron | 35.0% |
| TAGCACACCTCTAAACAAAA+AGG | + | chr2_1:34756347-34756366 | None:intergenic | 35.0% | |
| ACGAGTCGATAAACTAAGAA+GGG | + | chr2_1:34756559-34756578 | None:intergenic | 35.0% | |
| AACGAGTCGATAAACTAAGA+AGG | + | chr2_1:34756560-34756579 | None:intergenic | 35.0% | |
| CTGGACTCACAATATTAGTG+GGG | + | chr2_1:34750058-34750077 | None:intergenic | 40.0% | |
| TTGAACCAATGACCATTGAC+CGG | + | chr2_1:34750092-34750111 | None:intergenic | 40.0% | |
| !! | TATGAAGCTGATGATGGTGT+TGG | - | chr2_1:34750152-34750171 | Msa0206120:three_prime_UTR | 40.0% |
| AAGTCATGGGAATTATGGAG+TGG | - | chr2_1:34750404-34750423 | Msa0206120:CDS | 40.0% | |
| TGGGAATTATGGAGTGGTAA+TGG | - | chr2_1:34750410-34750429 | Msa0206120:CDS | 40.0% | |
| !!! | AGTGGTAATGGCAGTAGTTT+TGG | - | chr2_1:34750422-34750441 | Msa0206120:CDS | 40.0% |
| TCACAGATTATCACCTATGG+GGG | + | chr2_1:34750958-34750977 | None:intergenic | 40.0% | |
| GCTTCACAGATTATCACCTA+TGG | + | chr2_1:34750961-34750980 | None:intergenic | 40.0% | |
| CCGTATCATATTTCGTATCC+GGG | + | chr2_1:34750983-34751002 | None:intergenic | 40.0% | |
| CCCGGATACGAAATATGATA+CGG | - | chr2_1:34750980-34750999 | Msa0206120:intron | 40.0% | |
| !! | ACACTGATGGTGCTCTTTTT+GGG | + | chr2_1:34751250-34751269 | None:intergenic | 40.0% |
| !! | AACACTGATGGTGCTCTTTT+TGG | + | chr2_1:34751251-34751270 | None:intergenic | 40.0% |
| TAATTGGGAAATATTGGGGC+AGG | - | chr2_1:34751373-34751392 | Msa0206120:intron | 40.0% | |
| GATACTCTCCTGATACGTAT+CGG | - | chr2_1:34751418-34751437 | Msa0206120:intron | 40.0% | |
| ATACTCTCCTGATACGTATC+GGG | - | chr2_1:34751516-34751535 | Msa0206120:CDS | 40.0% | |
| ! | TGATACGTATCGGGAAGTAT+CGG | - | chr2_1:34751525-34751544 | Msa0206120:CDS | 40.0% |
| !! | AGACATGGATTGATTCGTTG+GGG | - | chr2_1:34752290-34752309 | Msa0206120:intron | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | + | chr2_1:34752537-34752556 | None:intergenic | 40.0% |
| TGGAAAATTCCAAGATGTGC+AGG | - | chr2_1:34752821-34752840 | Msa0206120:intron | 40.0% | |
| ! | CCCAACCTGAATTTTATGAG+TGG | - | chr2_1:34752886-34752905 | Msa0206120:intron | 40.0% |
| GCCACTCATAAAATTCAGGT+TGG | + | chr2_1:34752890-34752909 | None:intergenic | 40.0% | |
| GACAGCCACTCATAAAATTC+AGG | + | chr2_1:34752894-34752913 | None:intergenic | 40.0% | |
| GGAGGGTAAGCTGAAAATTT+AGG | + | chr2_1:34753147-34753166 | None:intergenic | 40.0% | |
| TCATAAGCTCCTTGTTAAGC+CGG | + | chr2_1:34753168-34753187 | None:intergenic | 40.0% | |
| ! | AAAGGCCCAGAAGTTTTTAC+AGG | - | chr2_1:34754284-34754303 | Msa0206120:intron | 40.0% |
| ! | CCCAGAAGTTTTTACAGGTA+AGG | - | chr2_1:34754289-34754308 | Msa0206120:intron | 40.0% |
| ! | TTCTATGGATTACTCTGCCT+TGG | - | chr2_1:34754320-34754339 | Msa0206120:intron | 40.0% |
| ACCATTTGCATTTGCGCATT+CGG | + | chr2_1:34754427-34754446 | None:intergenic | 40.0% | |
| !!! | GAACTTTTAGTTCACAAGCC+CGG | - | chr2_1:34754686-34754705 | Msa0206120:intron | 40.0% |
| GTGAAAGTAAAGTGGCCAAA+AGG | + | chr2_1:34754730-34754749 | None:intergenic | 40.0% | |
| AAGTTGCCACTGAAGAAGTA+TGG | - | chr2_1:34754939-34754958 | Msa0206120:intron | 40.0% | |
| ACTAGTCCATACTTCTTCAG+TGG | + | chr2_1:34754948-34754967 | None:intergenic | 40.0% | |
| ! | AGCTTTAGCTTCTGCAAAGA+AGG | - | chr2_1:34755077-34755096 | Msa0206120:intron | 40.0% |
| GATGTAGTTATTCTTGCCAC+AGG | - | chr2_1:34755137-34755156 | Msa0206120:intron | 40.0% | |
| TTGGTCACCTTTATATCCTG+TGG | + | chr2_1:34755156-34755175 | None:intergenic | 40.0% | |
| GTTCAAGGATTTCTCTCTAC+AGG | - | chr2_1:34755225-34755244 | Msa0206120:intron | 40.0% | |
| ! | TTTTAGCAATCCACACCTCA+AGG | - | chr2_1:34755442-34755461 | Msa0206120:intron | 40.0% |
| AAAGGCAAGGATCAAATTGG+TGG | + | chr2_1:34755583-34755602 | None:intergenic | 40.0% | |
| TAGAAAGACCAAGACCAGTT+TGG | - | chr2_1:34755900-34755919 | Msa0206120:intron | 40.0% | |
| AATCCATGGTAAACCACTAC+AGG | - | chr2_1:34755959-34755978 | Msa0206120:intron | 40.0% | |
| ATCCCACAATTGGCAATGAT+AGG | - | chr2_1:34756000-34756019 | Msa0206120:intron | 40.0% | |
| GCAATGATAGGATATGCTGA+GGG | - | chr2_1:34756012-34756031 | Msa0206120:intron | 40.0% | |
| ! | GCATTGTTACTTGTGGCATA+TGG | - | chr2_1:34756193-34756212 | Msa0206120:CDS | 40.0% |
| TGTAATCCGAGGAGAAAGAA+GGG | - | chr2_1:34756246-34756265 | Msa0206120:CDS | 40.0% | |
| AAAAGACCCTTCTTTCTCCT+CGG | + | chr2_1:34756255-34756274 | None:intergenic | 40.0% | |
| ! | GAGAAAGAAGGGTCTTTTTG+CGG | - | chr2_1:34756257-34756276 | Msa0206120:CDS | 40.0% |
| CGGAGCTATTTGAACCATAT+GGG | - | chr2_1:34756277-34756296 | Msa0206120:CDS | 40.0% | |
| TTATAATCAGTGGGCCCATA+TGG | + | chr2_1:34756294-34756313 | None:intergenic | 40.0% | |
| ! | TATGGGCCCACTGATTATAA+TGG | - | chr2_1:34756294-34756313 | Msa0206120:CDS | 40.0% |
| CACTTCAGCAGAATACATGT+TGG | - | chr2_1:34756380-34756399 | Msa0206120:CDS | 40.0% | |
| TTCAGCAGAATACATGTTGG+AGG | - | chr2_1:34756383-34756402 | Msa0206120:CDS | 40.0% | |
| TCAGCAGAATACATGTTGGA+GGG | - | chr2_1:34756384-34756403 | Msa0206120:CDS | 40.0% | |
| ! | TAGAGAAAGCACAACACTAG+TGG | - | chr2_1:34756422-34756441 | Msa0206120:CDS | 40.0% |
| ! | AGAGAAAGCACAACACTAGT+GGG | - | chr2_1:34756423-34756442 | Msa0206120:CDS | 40.0% |
| ! | ATGATGGTGTTGGAGGACTA+TGG | - | chr2_1:34750162-34750181 | Msa0206120:three_prime_UTR | 45.0% |
| ! | GGTAGGCATGTTTTCGGTTT+TGG | + | chr2_1:34750214-34750233 | None:intergenic | 45.0% |
| !!! | TGGCAGTAGTTTTGGATCCA+AGG | - | chr2_1:34750430-34750449 | Msa0206120:CDS | 45.0% |
| !!! | GGCAGTAGTTTTGGATCCAA+GGG | - | chr2_1:34750431-34750450 | Msa0206120:CDS | 45.0% |
| TGTAATATGCCACGTTCCCT+TGG | + | chr2_1:34750450-34750469 | None:intergenic | 45.0% | |
| ! | AGCAACCGAGTTTTCCCTTT+CGG | - | chr2_1:34750925-34750944 | Msa0206120:intron | 45.0% |
| CACAGATTATCACCTATGGG+GGG | + | chr2_1:34750957-34750976 | None:intergenic | 45.0% | |
| AGGTGATAATCTGTGAAGCC+CGG | - | chr2_1:34750962-34750981 | Msa0206120:intron | 45.0% | |
| GGAAATATTGGGGCAGGTAT+CGG | - | chr2_1:34751379-34751398 | Msa0206120:intron | 45.0% | |
| GATACTTCCCGATACGTATC+AGG | + | chr2_1:34751526-34751545 | None:intergenic | 45.0% | |
| !! | GATACGTATCGGGAAGTATC+GGG | - | chr2_1:34751526-34751545 | Msa0206120:CDS | 45.0% |
| ACGCAATAGCATTCTGAGTC+AGG | - | chr2_1:34751877-34751896 | Msa0206120:intron | 45.0% | |
| !! | GACATGGATTGATTCGTTGG+GGG | - | chr2_1:34752291-34752310 | Msa0206120:intron | 45.0% |
| TCGAATTGATGTGCCAACCA+AGG | + | chr2_1:34752344-34752363 | None:intergenic | 45.0% | |
| ATGTCCGTATCATAGTCTGC+TGG | - | chr2_1:34752466-34752485 | Msa0206120:intron | 45.0% | |
| TGCACCAGCAGACTATGATA+CGG | + | chr2_1:34752473-34752492 | None:intergenic | 45.0% | |
| TCATAGTCTGCTGGTGCAAA+AGG | - | chr2_1:34752475-34752494 | Msa0206120:intron | 45.0% | |
| !!! | CGACACTCATTTTGAAACGG+AGG | + | chr2_1:34752538-34752557 | None:intergenic | 45.0% |
| !! | ATGAGTGTCGCTTTAGGCTT+TGG | - | chr2_1:34752548-34752567 | Msa0206120:intron | 45.0% |
| AACCAACTTGACACTCGTAC+AGG | - | chr2_1:34752936-34752955 | Msa0206120:intron | 45.0% | |
| GATCTAGAGAGAATCGAAGG+AGG | + | chr2_1:34753201-34753220 | None:intergenic | 45.0% | |
| GTGGATCTAGAGAGAATCGA+AGG | + | chr2_1:34753204-34753223 | None:intergenic | 45.0% | |
| TTACACTCTTAGACCCCGTT+TGG | + | chr2_1:34753948-34753967 | None:intergenic | 45.0% | |
| ! | AAACTTCTGGGCCTTTTCCA+GGG | + | chr2_1:34754280-34754299 | None:intergenic | 45.0% |
| ! | AAAACTTCTGGGCCTTTTCC+AGG | + | chr2_1:34754281-34754300 | None:intergenic | 45.0% |
| AGCAGCAGTTTCTTTGTCCA+AGG | + | chr2_1:34754340-34754359 | None:intergenic | 45.0% | |
| AGAGTTACAGTAGTAGGCTC+AGG | - | chr2_1:34754378-34754397 | Msa0206120:intron | 45.0% | |
| !! | ACACTTCCTTCTTGGCCTTT+TGG | - | chr2_1:34754712-34754731 | Msa0206120:intron | 45.0% |
| ! | GGCCACTTTACTTTCACCAT+TGG | - | chr2_1:34754733-34754752 | Msa0206120:intron | 45.0% |
| CTAAAAGACACCTTCAAGGG+TGG | + | chr2_1:34755428-34755447 | None:intergenic | 45.0% | |
| AAAGCGGAAATCACACCTTG+AGG | + | chr2_1:34755460-34755479 | None:intergenic | 45.0% | |
| GAGAGTGACTTACAAAGGCA+AGG | + | chr2_1:34755596-34755615 | None:intergenic | 45.0% | |
| AAAGACCAAGACCAGTTTGG+TGG | - | chr2_1:34755903-34755922 | Msa0206120:intron | 45.0% | |
| ! | GTAAACCACCAAACTGGTCT+TGG | + | chr2_1:34755911-34755930 | None:intergenic | 45.0% |
| TTGCCTGTAGTGGTTTACCA+TGG | + | chr2_1:34755965-34755984 | None:intergenic | 45.0% | |
| GGCAATGATAGGATATGCTG+AGG | - | chr2_1:34756011-34756030 | Msa0206120:intron | 45.0% | |
| GAGACATGAAGTGTAATCCG+AGG | - | chr2_1:34756235-34756254 | Msa0206120:CDS | 45.0% | |
| GTGTAATCCGAGGAGAAAGA+AGG | - | chr2_1:34756245-34756264 | Msa0206120:CDS | 45.0% | |
| GCGGAGCTATTTGAACCATA+TGG | - | chr2_1:34756276-34756295 | Msa0206120:CDS | 45.0% | |
| CAGCAGAATACATGTTGGAG+GGG | - | chr2_1:34756385-34756404 | Msa0206120:CDS | 45.0% | |
| ! | ATACATGTTGGAGGGGTACA+TGG | - | chr2_1:34756392-34756411 | Msa0206120:CDS | 45.0% |
| ! | GAGAAAGCACAACACTAGTG+GGG | - | chr2_1:34756424-34756443 | Msa0206120:CDS | 45.0% |
| !!! | TAAAGTAAAAATTTAATTTA+TGG | + | chr2_1:34751673-34751692 | None:intergenic | 5.0% |
| !! | GAAGCTGATGATGGTGTTGG+AGG | - | chr2_1:34750155-34750174 | Msa0206120:three_prime_UTR | 50.0% |
| ! | ATGGTGTTGGAGGACTATGG+AGG | - | chr2_1:34750165-34750184 | Msa0206120:three_prime_UTR | 50.0% |
| !! | GTTTTGGATCCAAGGGAACG+TGG | - | chr2_1:34750438-34750457 | Msa0206120:CDS | 50.0% |
| GGGAACGTGGCATATTACAG+TGG | - | chr2_1:34750451-34750470 | Msa0206120:CDS | 50.0% | |
| ! | AACCGAGTTTTCCCTTTCGG+TGG | - | chr2_1:34750928-34750947 | Msa0206120:intron | 50.0% |
| CACCACCGAAAGGGAAAACT+CGG | + | chr2_1:34750933-34750952 | None:intergenic | 50.0% | |
| ! | ACTGCACCGATACGTCGATA+CGG | - | chr2_1:34751010-34751029 | Msa0206120:intron | 50.0% |
| TGGTCCACAGATGGTCAACA+TGG | - | chr2_1:34751835-34751854 | Msa0206120:intron | 50.0% | |
| CACACCATGTTGACCATCTG+TGG | + | chr2_1:34751842-34751861 | None:intergenic | 50.0% | |
| CACAGATGGTCAACATGGTG+TGG | - | chr2_1:34751840-34751859 | Msa0206120:intron | 50.0% | |
| !! | ATGGATTGATTCGTTGGGGG+AGG | - | chr2_1:34752294-34752313 | Msa0206120:intron | 50.0% |
| !! | ATTGATTCGTTGGGGGAGGT+TGG | - | chr2_1:34752298-34752317 | Msa0206120:intron | 50.0% |
| GACCTGTACGAGTGTCAAGT+TGG | + | chr2_1:34752941-34752960 | None:intergenic | 50.0% | |
| AAGCTCCTTGTTAAGCCGGA+GGG | + | chr2_1:34753164-34753183 | None:intergenic | 50.0% | |
| TAAGCTCCTTGTTAAGCCGG+AGG | + | chr2_1:34753165-34753184 | None:intergenic | 50.0% | |
| GGGAGGAACTCAGGAATGTT+TGG | + | chr2_1:34754260-34754279 | None:intergenic | 50.0% | |
| AACATTCCTGAGTTCCTCCC+TGG | - | chr2_1:34754260-34754279 | Msa0206120:intron | 50.0% | |
| GCCGAATGCGCAAATGCAAA+TGG | - | chr2_1:34754423-34754442 | Msa0206120:intron | 50.0% | |
| !! | CCAAGAAGGAAGTGTTCTCC+GGG | + | chr2_1:34754707-34754726 | None:intergenic | 50.0% |
| !! | GCCAAGAAGGAAGTGTTCTC+CGG | + | chr2_1:34754708-34754727 | None:intergenic | 50.0% |
| AAGTGGCCAAAAGGCCAAGA+AGG | + | chr2_1:34754721-34754740 | None:intergenic | 50.0% | |
| TTGCTAGAAGCCACCCTTGA+AGG | - | chr2_1:34755415-34755434 | Msa0206120:intron | 50.0% | |
| GGAAATCACACCTTGAGGTG+TGG | + | chr2_1:34755455-34755474 | None:intergenic | 50.0% | |
| ACATCCTCGCATCCCACAAT+TGG | - | chr2_1:34755990-34756009 | Msa0206120:intron | 50.0% | |
| ATTGCCAATTGTGGGATGCG+AGG | + | chr2_1:34755997-34756016 | None:intergenic | 50.0% | |
| CAATGACCATTGACCGGCAG+GGG | + | chr2_1:34750086-34750105 | None:intergenic | 55.0% | |
| CCAATGACCATTGACCGGCA+GGG | + | chr2_1:34750087-34750106 | None:intergenic | 55.0% | |
| ACCAATGACCATTGACCGGC+AGG | + | chr2_1:34750088-34750107 | None:intergenic | 55.0% | |
| !! | GGGAAGTATCGGGCAGGTAT+CGG | - | chr2_1:34751536-34751555 | Msa0206120:CDS | 55.0% |
| ! | GTATCGGTGCAGGATACGCA+GGG | - | chr2_1:34751552-34751571 | Msa0206120:CDS | 55.0% |
| TATCGGTGCAGGATACGCAG+GGG | - | chr2_1:34751553-34751572 | Msa0206120:CDS | 55.0% | |
| GCTTACCCTCCGGCTTAACA+AGG | - | chr2_1:34753156-34753175 | Msa0206120:intron | 55.0% | |
| ! | CCTTTTCCAGGGAGGAACTC+AGG | + | chr2_1:34754269-34754288 | None:intergenic | 55.0% |
| CCTGAGTTCCTCCCTGGAAA+AGG | - | chr2_1:34754266-34754285 | Msa0206120:intron | 55.0% | |
| CCCGGAGAACACTTCCTTCT+TGG | - | chr2_1:34754704-34754723 | Msa0206120:intron | 55.0% | |
| CCCTGCCGGTCAATGGTCAT+TGG | - | chr2_1:34750084-34750103 | Msa0206120:three_prime_UTR | 60.0% | |
| ATGGGGGGACACCACCGAAA+GGG | + | chr2_1:34750942-34750961 | None:intergenic | 60.0% | |
| TATGGGGGGACACCACCGAA+AGG | + | chr2_1:34750943-34750962 | None:intergenic | 60.0% | |
| TTTCGGTGGTGTCCCCCCAT+AGG | - | chr2_1:34750942-34750961 | Msa0206120:intron | 60.0% | |
| !! | CGTATCGGGAAGTATCGGGC+AGG | - | chr2_1:34751530-34751549 | Msa0206120:CDS | 60.0% |
| !! | TATCGGGCAGGTATCGGTGC+AGG | - | chr2_1:34751542-34751561 | Msa0206120:CDS | 60.0% |
| !! | GGTATCGGTGCAGGATACGC+AGG | - | chr2_1:34751551-34751570 | Msa0206120:CDS | 60.0% |
| GGGTGTGCACCTGCACATCT+TGG | + | chr2_1:34752833-34752852 | None:intergenic | 60.0% | |
| TGCACACCCTCAATCCCAGC+TGG | - | chr2_1:34752844-34752863 | Msa0206120:intron | 60.0% | |
| !! | TTCAGGTTGGGCGCAAAGCC+AGG | + | chr2_1:34752877-34752896 | None:intergenic | 60.0% |
| ! | CTTCTGGGCCTTTTCCAGGG+AGG | + | chr2_1:34754277-34754296 | None:intergenic | 60.0% |
| GAGTCCAGATCCACCCCTGC+CGG | - | chr2_1:34750070-34750089 | Msa0206120:three_prime_UTR | 65.0% | |
| TTGACCGGCAGGGGTGGATC+TGG | + | chr2_1:34750077-34750096 | None:intergenic | 65.0% | |
| GATCCACCCCTGCCGGTCAA+TGG | - | chr2_1:34750077-34750096 | Msa0206120:three_prime_UTR | 65.0% | |
| TGACCATTGACCGGCAGGGG+TGG | + | chr2_1:34750083-34750102 | None:intergenic | 65.0% | |
| GCGGAGCCAGCTGGGATTGA+GGG | + | chr2_1:34752853-34752872 | None:intergenic | 65.0% | |
| AGCGGAGCCAGCTGGGATTG+AGG | + | chr2_1:34752854-34752873 | None:intergenic | 65.0% | |
| GTTGGGCGCAAAGCCAGGAG+CGG | + | chr2_1:34752872-34752891 | None:intergenic | 65.0% | |
| ! | ATCCCAGCTGGCTCCGCTCC+TGG | - | chr2_1:34752856-34752875 | Msa0206120:intron | 70.0% |
| AGCCAGGAGCGGAGCCAGCT+GGG | + | chr2_1:34752861-34752880 | None:intergenic | 70.0% | |
| AAGCCAGGAGCGGAGCCAGC+TGG | + | chr2_1:34752862-34752881 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 34750041 | 34756647 | 34750041 | ID=Msa0206120;Name=Msa0206120 |
| chr2_1 | mRNA | 34750041 | 34756647 | 34750041 | ID=Msa0206120-mRNA-1;Parent=Msa0206120;Name=Msa0206120-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0.75|0.6|1|1|1|5|315|478 |
| chr2_1 | exon | 34750041 | 34750707 | 34750041 | ID=Msa0206120-mRNA-1:exon:11609;Parent=Msa0206120-mRNA-1 |
| chr2_1 | exon | 34751442 | 34751791 | 34751442 | ID=Msa0206120-mRNA-1:exon:11608;Parent=Msa0206120-mRNA-1 |
| chr2_1 | exon | 34751934 | 34752109 | 34751934 | ID=Msa0206120-mRNA-1:exon:11607;Parent=Msa0206120-mRNA-1 |
| chr2_1 | exon | 34752383 | 34752482 | 34752383 | ID=Msa0206120-mRNA-1:exon:11606;Parent=Msa0206120-mRNA-1 |
| chr2_1 | exon | 34756189 | 34756647 | 34756189 | ID=Msa0206120-mRNA-1:exon:11605;Parent=Msa0206120-mRNA-1 |
| chr2_1 | CDS | 34756189 | 34756647 | 34756189 | ID=Msa0206120-mRNA-1:cds;Parent=Msa0206120-mRNA-1 |
| chr2_1 | CDS | 34752383 | 34752482 | 34752383 | ID=Msa0206120-mRNA-1:cds;Parent=Msa0206120-mRNA-1 |
| chr2_1 | CDS | 34751934 | 34752109 | 34751934 | ID=Msa0206120-mRNA-1:cds;Parent=Msa0206120-mRNA-1 |
| chr2_1 | CDS | 34751442 | 34751791 | 34751442 | ID=Msa0206120-mRNA-1:cds;Parent=Msa0206120-mRNA-1 |
| chr2_1 | CDS | 34750356 | 34750707 | 34750356 | ID=Msa0206120-mRNA-1:cds;Parent=Msa0206120-mRNA-1 |
| chr2_1 | three_prime_UTR | 34750041 | 34750355 | 34750041 | ID=Msa0206120-mRNA-1:three_prime_utr;Parent=Msa0206120-mRNA-1 |
| Gene Sequence |
| Protein sequence |
