Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0326270 | XP_024631713.2 | 87.638 | 542 | 42 | 1 | 1 | 542 | 1 | 517 | 0.0 | 953 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0326270 | sp|Q9LMA1|FMO1_ARATH | 40.625 | 544 | 277 | 12 | 4 | 537 | 12 | 519 | 6.86e-134 | 402 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0206080 | Msa0326270 | 0.860887 | 1.509988e-63 | -8.615850e-47 |
| Msa0206120 | Msa0326270 | 0.905689 | 3.292900e-80 | -8.615850e-47 |
| Msa0206130 | Msa0326270 | 0.899043 | 2.927141e-77 | -8.615850e-47 |
| Msa0206160 | Msa0326270 | 0.903232 | 4.288878e-79 | -8.615850e-47 |
| Msa0206180 | Msa0326270 | 0.860809 | 1.594394e-63 | -8.615850e-47 |
| Msa0206190 | Msa0326270 | 0.904877 | 7.747737e-80 | -8.615850e-47 |
| Msa0206200 | Msa0326270 | 0.831552 | 1.564963e-55 | -8.615850e-47 |
| Msa0249270 | Msa0326270 | 0.891227 | 4.813299e-74 | -8.615850e-47 |
| Msa0326260 | Msa0326270 | 0.886970 | 2.149969e-72 | -8.615850e-47 |
| Msa0326270 | Msa0326280 | 0.870124 | 1.848807e-66 | -8.615850e-47 |
| Msa0326270 | Msa0358230 | 0.801586 | 8.397540e-49 | -8.615850e-47 |
| Msa0326270 | Msa0418480 | 0.809833 | 1.556253e-50 | -8.615850e-47 |
| Msa0326270 | Msa0465860 | 0.814732 | 1.326569e-51 | -8.615850e-47 |
| Msa0326270 | Msa0510230 | 0.818174 | 2.248792e-52 | -8.615850e-47 |
| Msa0326270 | Msa0520730 | 0.801409 | 9.129915e-49 | -8.615850e-47 |
| Msa0326270 | Msa0547050 | 0.820121 | 8.108193e-53 | -8.615850e-47 |
| Msa0326270 | Msa0601780 | 0.812857 | 3.433519e-51 | -8.615850e-47 |
| Msa0326270 | Msa0640390 | 0.806362 | 8.536657e-50 | -8.615850e-47 |
| Msa0326270 | Msa0700850 | 0.812100 | 5.023233e-51 | -8.615850e-47 |
| Msa0326270 | Msa0700910 | 0.802617 | 5.152072e-49 | -8.615850e-47 |
| Msa0326270 | Msa1421810 | 0.808441 | 3.092950e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0326270 | MtrunA17_Chr2g0304721 | 87.638 | 542 | 42 | 1 | 1 | 542 | 1 | 517 | 0.0 | 953 |
| Msa0326270 | MtrunA17_Chr2g0305211 | 75.413 | 545 | 106 | 2 | 1 | 542 | 1 | 520 | 0.0 | 859 |
| Msa0326270 | MtrunA17_Chr2g0305231 | 75.413 | 545 | 106 | 2 | 1 | 542 | 1 | 520 | 0.0 | 859 |
| Msa0326270 | MtrunA17_Chr2g0304651 | 74.495 | 545 | 109 | 3 | 1 | 542 | 1 | 518 | 0.0 | 825 |
| Msa0326270 | MtrunA17_Chr2g0301661 | 38.848 | 538 | 293 | 10 | 4 | 536 | 13 | 519 | 1.39e-121 | 367 |
| Msa0326270 | MtrunA17_Chr4g0070101 | 40.000 | 515 | 273 | 11 | 27 | 536 | 36 | 519 | 2.72e-119 | 362 |
| Msa0326270 | MtrunA17_Chr2g0301471 | 39.033 | 538 | 292 | 9 | 4 | 536 | 13 | 519 | 3.03e-119 | 361 |
| Msa0326270 | MtrunA17_Chr4g0070111 | 41.135 | 282 | 161 | 4 | 258 | 537 | 1 | 279 | 4.19e-70 | 226 |
| Msa0326270 | MtrunA17_Chr2g0286701 | 34.615 | 260 | 140 | 5 | 1 | 258 | 10 | 241 | 1.29e-46 | 165 |
| Msa0326270 | MtrunA17_Chr4g0070121 | 38.667 | 225 | 112 | 3 | 27 | 250 | 36 | 235 | 2.88e-44 | 156 |
| Msa0326270 | MtrunA17_Chr2g0286681 | 41.584 | 101 | 58 | 1 | 313 | 413 | 19 | 118 | 7.77e-23 | 94.0 |
| Msa0326270 | MtrunA17_Chr2g0286671 | 40.594 | 101 | 59 | 1 | 436 | 536 | 1 | 100 | 1.48e-20 | 87.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0326270 | AT1G19250.1 | 40.625 | 544 | 277 | 12 | 4 | 537 | 12 | 519 | 6.98e-135 | 402 |
| Msa0326270 | AT5G45180.1 | 36.571 | 525 | 245 | 14 | 4 | 517 | 12 | 459 | 1.11e-105 | 325 |
Find 120 sgRNAs with CRISPR-Local
Find 341 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGTTATAACATATTGTTTA+TGG | 0.095585 | 2_4:-35879024 | Msa0326270:three_prime_UTR |
| TTGAACTGTCAATGTAATTT+TGG | 0.131877 | 2_4:+35880396 | None:intergenic |
| TCTCCCAGATTTCAACATTT+TGG | 0.186412 | 2_4:-35880976 | Msa0326270:CDS |
| AATAACTACATCTGTTTCTA+AGG | 0.224263 | 2_4:+35880478 | None:intergenic |
| CCCATGGAAAATCTGAAAAT+TGG | 0.228440 | 2_4:+35884972 | None:intergenic |
| CCCGGAGAACACTTCCTTCT+TGG | 0.233331 | 2_4:-35880897 | Msa0326270:CDS |
| TGGAGAAGGATGTTAAATTA+TGG | 0.235292 | 2_4:-35879498 | Msa0326270:CDS |
| ACACTTCCTTCTTGGCCTTT+TGG | 0.237410 | 2_4:-35880889 | Msa0326270:CDS |
| CAATATATAGCTTTATCTTT+TGG | 0.265054 | 2_4:-35879155 | Msa0326270:three_prime_UTR |
| AGGTAAGGTTATGCATTCTA+TGG | 0.272924 | 2_4:-35881297 | Msa0326270:CDS |
| GAAATATCTGCATGTCAAAT+TGG | 0.294249 | 2_4:-35880614 | Msa0326270:CDS |
| ATGTCCAAAATGTTGAAATC+TGG | 0.299874 | 2_4:+35880972 | None:intergenic |
| GACAGCCACTCATAAAATTC+AGG | 0.302533 | 2_4:+35882580 | None:intergenic |
| TACCTTTGTTGAGAAATTCT+TGG | 0.304695 | 2_4:+35884724 | None:intergenic |
| AGTGGTAATGGCAGTAGTTT+TGG | 0.313462 | 2_4:-35884782 | Msa0326270:CDS |
| ATATGAAGTCATGGGAATTA+TGG | 0.316758 | 2_4:-35884805 | Msa0326270:CDS |
| GCTGAGCTATTTGAACCATA+TGG | 0.318612 | 2_4:-35879346 | Msa0326270:CDS |
| ATCCCAGCTGGCTCCGCTCC+TGG | 0.323411 | 2_4:-35882615 | Msa0326270:CDS |
| ACCATTTGCATTTGCGCATT+CGG | 0.341818 | 2_4:+35881178 | None:intergenic |
| AAAATTACATTGACAGTTCA+AGG | 0.349499 | 2_4:-35880394 | Msa0326270:CDS |
| TCTTGAAGAAAACTATGATT+AGG | 0.356221 | 2_4:+35880635 | None:intergenic |
| CTTTGCATTGGGAAATATAG+TGG | 0.362241 | 2_4:-35881371 | Msa0326270:CDS |
| ATAACCAGCAATTTACAAAA+TGG | 0.362970 | 2_4:-35885161 | Msa0326270:exon |
| ATTCTTGCCACAGGATATAA+AGG | 0.366577 | 2_4:-35880458 | Msa0326270:CDS |
| AATAAGAGAGTTACAGTAGT+AGG | 0.371604 | 2_4:-35881230 | Msa0326270:CDS |
| TGCAAATATGCTCTACAGAT+TGG | 0.376558 | 2_4:-35885091 | Msa0326270:CDS |
| TCTACAACTTGCTTATTACT+TGG | 0.392477 | 2_4:+35884926 | None:intergenic |
| GGGAGGAACTCAGGAATGTT+TGG | 0.394469 | 2_4:+35881344 | None:intergenic |
| GGAGAAGGATGTTAAATTAT+GGG | 0.394999 | 2_4:-35879497 | Msa0326270:CDS |
| GCCAAGAAGGAAGTGTTCTC+CGG | 0.407386 | 2_4:+35880896 | None:intergenic |
| TTGGAATTGAATCTTATGTA+AGG | 0.408337 | 2_4:+35884866 | None:intergenic |
| AAGCCAGGAGCGGAGCCAGC+TGG | 0.414589 | 2_4:+35882612 | None:intergenic |
| CTGAGCTATTTGAACCATAT+GGG | 0.415677 | 2_4:-35879345 | Msa0326270:CDS |
| AAGTTGCCACTGAAGAAGTA+TGG | 0.417922 | 2_4:-35880665 | Msa0326270:CDS |
| TTGTTGAAACATATCTGAAA+TGG | 0.425780 | 2_4:-35880688 | Msa0326270:CDS |
| ATAATCTATATCAATGACTT+TGG | 0.427553 | 2_4:+35884847 | None:intergenic |
| AGCTTTAGCTTCTGCAAAGA+AGG | 0.430511 | 2_4:-35880527 | Msa0326270:CDS |
| TTATAATCAGTGGGCCCATA+TGG | 0.433595 | 2_4:+35879331 | None:intergenic |
| GCATTGTTACTTGTGGCATA+TGG | 0.438868 | 2_4:-35879429 | Msa0326270:CDS |
| GAATCTTATGTAAGGAATGA+TGG | 0.442345 | 2_4:+35884874 | None:intergenic |
| GCGGAGCCAGCTGGGATTGA+GGG | 0.444017 | 2_4:+35882621 | None:intergenic |
| ATGATGGTGTTGGAGGACTA+TGG | 0.447006 | 2_4:-35885042 | Msa0326270:CDS |
| AGCGGAGCCAGCTGGGATTG+AGG | 0.449307 | 2_4:+35882620 | None:intergenic |
| TTCAGGTTGGGCGCGAAGCC+AGG | 0.451678 | 2_4:+35882597 | None:intergenic |
| AGTTTGTTATTCTTTGCATT+GGG | 0.451815 | 2_4:-35881382 | Msa0326270:CDS |
| GTTCAAGGATTTCTCTCTAC+AGG | 0.451911 | 2_4:-35880379 | Msa0326270:intron |
| ATCCTATCATTGCCAATTGT+GGG | 0.453863 | 2_4:+35879620 | None:intergenic |
| GGCCACTTTACTTTCACCAT+TGG | 0.455226 | 2_4:-35880868 | Msa0326270:intron |
| TGTAATATGCCATGTTCCCT+TGG | 0.457974 | 2_4:+35884757 | None:intergenic |
| ACATCCTCGCATCCCACAAT+TGG | 0.460278 | 2_4:-35879632 | Msa0326270:CDS |
| GAGTTTGTTATTCTTTGCAT+TGG | 0.462117 | 2_4:-35881383 | Msa0326270:CDS |
| TTCTATGGATTACTCTGCCT+TGG | 0.462649 | 2_4:-35881282 | Msa0326270:CDS |
| TTGTGATTTCTTTATCTCGA+TGG | 0.463038 | 2_4:+35880550 | None:intergenic |
| AACATTCCTGAGTTCCTCCC+TGG | 0.466304 | 2_4:-35881341 | Msa0326270:CDS |
| TGTCCAAAATGTTGAAATCT+GGG | 0.468562 | 2_4:+35880973 | None:intergenic |
| CCTGAGTTCCTCCCTGGAAA+AGG | 0.469202 | 2_4:-35881335 | Msa0326270:CDS |
| TTTATGGTAATGTTTAATGA+TGG | 0.480787 | 2_4:-35879008 | Msa0326270:three_prime_UTR |
| AACAAGACCATTATAATCAG+TGG | 0.481998 | 2_4:+35879321 | None:intergenic |
| AGCCAGGAGCGGAGCCAGCT+GGG | 0.482393 | 2_4:+35882613 | None:intergenic |
| TATGGGCCCACTGATTATAA+TGG | 0.482729 | 2_4:-35879328 | Msa0326270:CDS |
| TTGGTCACCTTTATATCCTG+TGG | 0.488352 | 2_4:+35880451 | None:intergenic |
| AGAGTTGCAATTGTTGGTGC+AGG | 0.491948 | 2_4:-35885133 | Msa0326270:CDS |
| TATCCTATCATTGCCAATTG+TGG | 0.493186 | 2_4:+35879619 | None:intergenic |
| TCATCAGCTTCATATACAAC+AGG | 0.497177 | 2_4:+35885061 | None:intergenic |
| GTCATTGATATAGATTATGT+TGG | 0.502491 | 2_4:-35884842 | Msa0326270:CDS |
| ATCCCACAATTGGCAATGAT+AGG | 0.504586 | 2_4:-35879622 | Msa0326270:CDS |
| AGAGTTACAGTAGTAGGCTC+AGG | 0.504894 | 2_4:-35881224 | Msa0326270:CDS |
| CTAGAAAATGTGCTAACCAT+TGG | 0.509768 | 2_4:+35879554 | None:intergenic |
| ATGTAATCCGTGGAGAAAGA+AGG | 0.509801 | 2_4:-35879377 | Msa0326270:CDS |
| ATACATGTTGGAGGGGTACA+TGG | 0.515133 | 2_4:-35879231 | Msa0326270:three_prime_UTR |
| TGGGAATTATGGAGTGGTAA+TGG | 0.517223 | 2_4:-35884794 | Msa0326270:CDS |
| GTGAAAGTAAAGTGGCCAAA+AGG | 0.517743 | 2_4:+35880874 | None:intergenic |
| GCCGAATGCGCAAATGCAAA+TGG | 0.517814 | 2_4:-35881179 | Msa0326270:intron |
| TGCACACCCTCAATCCCAGC+TGG | 0.518670 | 2_4:-35882627 | Msa0326270:CDS |
| TTAGTTTATCGACTCGTCGA+TGG | 0.519884 | 2_4:-35879061 | Msa0326270:three_prime_UTR |
| AAGTGGCCAAAAGGCCAAGA+AGG | 0.525815 | 2_4:+35880883 | None:intergenic |
| GTTCTATTTATAATTGTGCA+AGG | 0.529372 | 2_4:+35881011 | None:intergenic |
| GATGTAGTTATTCTTGCCAC+AGG | 0.531258 | 2_4:-35880467 | Msa0326270:CDS |
| CTGATGAAGATATGAAGTCA+TGG | 0.535713 | 2_4:-35884814 | Msa0326270:CDS |
| TATGAAGCTGATGATGGTGT+TGG | 0.543117 | 2_4:-35885052 | Msa0326270:CDS |
| CCACTCATAAAATTCAGGTT+GGG | 0.543863 | 2_4:+35882585 | None:intergenic |
| TGATGTACTCAGATAGATGC+AGG | 0.544025 | 2_4:+35885193 | None:intergenic |
| GACGAGTCGATAAACTAAGA+AGG | 0.545662 | 2_4:+35879066 | None:intergenic |
| CCAAGAAGGAAGTGTTCTCC+GGG | 0.546254 | 2_4:+35880897 | None:intergenic |
| ATAACTACATCTGTTTCTAA+GGG | 0.546830 | 2_4:+35880479 | None:intergenic |
| AGCAGCAGTTTCTTTGTCCA+AGG | 0.547408 | 2_4:+35881265 | None:intergenic |
| AAAAGACCCTTCTTTCTCCA+CGG | 0.548757 | 2_4:+35879370 | None:intergenic |
| GCCACTCATAAAATTCAGGT+TGG | 0.549434 | 2_4:+35882584 | None:intergenic |
| GTTGTATATGAAGCTGATGA+TGG | 0.564559 | 2_4:-35885058 | Msa0326270:CDS |
| CACTTCAGCAGAATACATGT+TGG | 0.565258 | 2_4:-35879243 | Msa0326270:three_prime_UTR |
| GAAGCTGATGATGGTGTTGG+AGG | 0.565452 | 2_4:-35885049 | Msa0326270:CDS |
| ATTGCCTAGTATAAAAGAGA+TGG | 0.565732 | 2_4:-35879518 | Msa0326270:CDS |
| TGTAATCCGTGGAGAAAGAA+GGG | 0.576415 | 2_4:-35879376 | Msa0326270:CDS |
| TACCAATGGTGAAAGTAAAG+TGG | 0.578127 | 2_4:+35880866 | None:intergenic |
| TACCAAGAATTTCTCAACAA+AGG | 0.578314 | 2_4:-35884726 | Msa0326270:intron |
| TTCAGCAGAATACATGTTGG+AGG | 0.581199 | 2_4:-35879240 | Msa0326270:three_prime_UTR |
| ACGAGTCGATAAACTAAGAA+GGG | 0.583579 | 2_4:+35879067 | None:intergenic |
| TTCTATTTATAATTGTGCAA+GGG | 0.586803 | 2_4:+35881012 | None:intergenic |
| TGATGAAGATATGAAGTCAT+GGG | 0.593792 | 2_4:-35884813 | Msa0326270:CDS |
| AAACTCCAAAACCGAAAACA+AGG | 0.603001 | 2_4:-35884998 | Msa0326270:CDS |
| GGCAATGATAGGATATGCTG+AGG | 0.603017 | 2_4:-35879611 | Msa0326270:CDS |
| AGATCATGCATTGTTACTTG+TGG | 0.603581 | 2_4:-35879436 | Msa0326270:CDS |
| TCAGCAGAATACATGTTGGA+GGG | 0.608166 | 2_4:-35879239 | Msa0326270:three_prime_UTR |
| GTTGGGCGCGAAGCCAGGAG+CGG | 0.608737 | 2_4:+35882602 | None:intergenic |
| GAGCATATTTGCAAGCAAGT+AGG | 0.621227 | 2_4:+35885101 | None:intergenic |
| ATTGTTGGTGCAGGAATCAG+TGG | 0.624826 | 2_4:-35885124 | Msa0326270:CDS |
| TATGTTATAACATAAACAGA+AGG | 0.627898 | 2_4:+35879034 | None:intergenic |
| ACAAGACCATTATAATCAGT+GGG | 0.636085 | 2_4:+35879322 | None:intergenic |
| GAGACATGAAATGTAATCCG+TGG | 0.639145 | 2_4:-35879387 | Msa0326270:CDS |
| TAGTATAAAAGAGATGGAGA+AGG | 0.639486 | 2_4:-35879512 | Msa0326270:CDS |
| ACTAGTCCATACTTCTTCAG+TGG | 0.645916 | 2_4:+35880659 | None:intergenic |
| TTATAAATAGAACTTCACAC+TGG | 0.658187 | 2_4:-35881001 | Msa0326270:CDS |
| CTAATGAAATGAGATGCCAA+TGG | 0.660576 | 2_4:-35879570 | Msa0326270:CDS |
| TAGAGAAAGCACAACACTCG+TGG | 0.665571 | 2_4:-35879201 | Msa0326270:three_prime_UTR |
| AAGTCATGGGAATTATGGAG+TGG | 0.671476 | 2_4:-35884800 | Msa0326270:CDS |
| CAGCAGAATACATGTTGGAG+GGG | 0.676165 | 2_4:-35879238 | Msa0326270:three_prime_UTR |
| ATTGCCAATTGTGGGATGCG+AGG | 0.681590 | 2_4:+35879628 | None:intergenic |
| GGGAACATGGCATATTACAG+TGG | 0.699925 | 2_4:-35884753 | Msa0326270:CDS |
| GCAATGATAGGATATGCTGA+GGG | 0.702690 | 2_4:-35879610 | Msa0326270:CDS |
| ATGGTGTTGGAGGACTATGG+AGG | 0.798552 | 2_4:-35885039 | Msa0326270:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATATATATATATATA+TGG | - | chr2_4:35882224-35882243 | Msa0326270:intron | 0.0% |
| !! | ATATATATATATATATATAT+GGG | - | chr2_4:35882225-35882244 | Msa0326270:intron | 0.0% |
| !! | TATATTTGCATATTAAAAAA+TGG | + | chr2_4:35880113-35880132 | None:intergenic | 10.0% |
| !!! | TTATTTTAGTTAACATTAAT+TGG | - | chr2_4:35880350-35880369 | Msa0326270:intron | 10.0% |
| !!! | TATTTTAGTTAACATTAATT+GGG | - | chr2_4:35880351-35880370 | Msa0326270:intron | 10.0% |
| !!! | AACTAAGAATTTTTTTTTAA+AGG | - | chr2_4:35882012-35882031 | Msa0326270:intron | 10.0% |
| !!! | TGAATATTGATATTTTTTTA+AGG | - | chr2_4:35882184-35882203 | Msa0326270:intron | 10.0% |
| !! | TCTTACAAAAATATATAAAT+TGG | + | chr2_4:35883425-35883444 | None:intergenic | 10.0% |
| !! | ATCTTTCAAATATATATATA+GGG | + | chr2_4:35884113-35884132 | None:intergenic | 10.0% |
| !! | AATCTTTCAAATATATATAT+AGG | + | chr2_4:35884114-35884133 | None:intergenic | 10.0% |
| !! | ATATATATTTGAAAGATTAA+CGG | - | chr2_4:35884116-35884135 | Msa0326270:intron | 10.0% |
| !!! | TTCATATTTCATTTTCTTTT+TGG | - | chr2_4:35879530-35879549 | Msa0326270:CDS | 15.0% |
| !!! | TACGAGATTTTTTTTTTTTT+AGG | + | chr2_4:35879797-35879816 | None:intergenic | 15.0% |
| !! | TGATTAAAATTGTGTATTTA+TGG | - | chr2_4:35879841-35879860 | Msa0326270:intron | 15.0% |
| !! | TTAGTTGAATTATAAGATTA+AGG | - | chr2_4:35880731-35880750 | Msa0326270:intron | 15.0% |
| !! | TACAAAAGTTAGTATATTAA+TGG | + | chr2_4:35880791-35880810 | None:intergenic | 15.0% |
| !! | AAATTTAACTCATTAATTGT+CGG | - | chr2_4:35880918-35880937 | Msa0326270:CDS | 15.0% |
| !! | AAAAATCAATGTGATTATTT+GGG | + | chr2_4:35881062-35881081 | None:intergenic | 15.0% |
| !! | TAAAAATCAATGTGATTATT+TGG | + | chr2_4:35881063-35881082 | None:intergenic | 15.0% |
| !! | TGAAAAATCAGTATAATAAT+AGG | - | chr2_4:35881521-35881540 | Msa0326270:intron | 15.0% |
| !! | AATTTAGGCTTATTAAAATA+TGG | + | chr2_4:35881825-35881844 | None:intergenic | 15.0% |
| !!! | TAAAATATGTTTTGAAAAAG+TGG | + | chr2_4:35881916-35881935 | None:intergenic | 15.0% |
| !! | ATTATAATGTTAGTTATCTT+TGG | - | chr2_4:35881936-35881955 | Msa0326270:intron | 15.0% |
| !! | TACACTAATATCTATATATA+TGG | - | chr2_4:35882122-35882141 | Msa0326270:intron | 15.0% |
| !!! | AAAAAAAATCTTGATAATTG+TGG | - | chr2_4:35882314-35882333 | Msa0326270:intron | 15.0% |
| !!! | TATTTTTGATATGTATTTGT+AGG | + | chr2_4:35883906-35883925 | None:intergenic | 15.0% |
| !!! | AATATTCCAGAAAATTTTAT+TGG | - | chr2_4:35884742-35884761 | Msa0326270:CDS | 15.0% |
| !!! | TTTATGATCTTTTTTATTAG+AGG | - | chr2_4:35884915-35884934 | Msa0326270:CDS | 15.0% |
| !! | ATGTTATAACATATTGTTTA+TGG | - | chr2_4:35885177-35885196 | Msa0326270:five_prime_UTR | 15.0% |
| !! | ATAATCTATATCAATGACTT+TGG | + | chr2_4:35879357-35879376 | None:intergenic | 20.0% |
| !! | TTTCATAATTACAAATGTGT+TGG | - | chr2_4:35879557-35879576 | Msa0326270:CDS | 20.0% |
| !! | AGAGATAAATAAAGGAAATA+TGG | - | chr2_4:35879626-35879645 | Msa0326270:CDS | 20.0% |
| !! | AAACAAAAGAAATCAATCAT+AGG | - | chr2_4:35880138-35880157 | Msa0326270:intron | 20.0% |
| !! | TTGATAAAGTATAACACTAA+CGG | + | chr2_4:35880276-35880295 | None:intergenic | 20.0% |
| !! | TAACATTAATTGGGAAATAT+TGG | - | chr2_4:35880360-35880379 | Msa0326270:intron | 20.0% |
| !! | AACATTAATTGGGAAATATT+GGG | - | chr2_4:35880361-35880380 | Msa0326270:intron | 20.0% |
| !! | GAATTATAAGATTAAGGTTA+AGG | - | chr2_4:35880737-35880756 | Msa0326270:intron | 20.0% |
| !!! | TCAATTGACTTTTGATTATT+AGG | + | chr2_4:35881412-35881431 | None:intergenic | 20.0% |
| !! | GTATAATAATAGGCATAAAT+TGG | - | chr2_4:35881531-35881550 | Msa0326270:intron | 20.0% |
| !! | TAAGACAAAATTAACATTAG+AGG | + | chr2_4:35882162-35882181 | None:intergenic | 20.0% |
| !! | ATATAAGTTGTTTATCCAAA+CGG | - | chr2_4:35882530-35882549 | Msa0326270:intron | 20.0% |
| !! | TGAAAATTGAATATATTCTG+CGG | + | chr2_4:35882602-35882621 | None:intergenic | 20.0% |
| !! | AATTATTGTTGTATTGCAAA+GGG | + | chr2_4:35882757-35882776 | None:intergenic | 20.0% |
| !! | AAATTATTGTTGTATTGCAA+AGG | + | chr2_4:35882758-35882777 | None:intergenic | 20.0% |
| !! | TTCTATTTATAATTGTGCAA+GGG | + | chr2_4:35883192-35883211 | None:intergenic | 20.0% |
| !!! | TTCTTTTACTTTGTCAAAAA+AGG | + | chr2_4:35883627-35883646 | None:intergenic | 20.0% |
| !!! | TTTTTTGACAAAGTAAAAGA+AGG | - | chr2_4:35883626-35883645 | Msa0326270:intron | 20.0% |
| !!! | TGAATATGCTTTTAAGTTTT+TGG | + | chr2_4:35883772-35883791 | None:intergenic | 20.0% |
| !!! | TCAATGTAATTTTGGAATAT+TGG | + | chr2_4:35883800-35883819 | None:intergenic | 20.0% |
| !! | CAAATCATACATAAGAAAAT+AGG | + | chr2_4:35883881-35883900 | None:intergenic | 20.0% |
| !!! | CTATTTTCTTATGTATGATT+TGG | - | chr2_4:35883879-35883898 | Msa0326270:intron | 20.0% |
| !!! | TTTGAAATATTAATAGAGTC+AGG | + | chr2_4:35884207-35884226 | None:intergenic | 20.0% |
| !! | TAAAATATTAATAGAGTCAG+AGG | - | chr2_4:35884439-35884458 | Msa0326270:intron | 20.0% |
| !! | AAATTCTCTATACTAATCTA+TGG | - | chr2_4:35884524-35884543 | Msa0326270:intron | 20.0% |
| !!! | CAATATATAGCTTTATCTTT+TGG | - | chr2_4:35885046-35885065 | Msa0326270:CDS | 20.0% |
| !! | TATGTTATAACATAAACAGA+AGG | + | chr2_4:35885170-35885189 | None:intergenic | 20.0% |
| !!! | TTTATGGTAATGTTTAATGA+TGG | - | chr2_4:35885193-35885212 | Msa0326270:five_prime_UTR | 20.0% |
| ! | ATAACCAGCAATTTACAAAA+TGG | - | chr2_4:35879040-35879059 | Msa0326270:three_prime_UTR | 25.0% |
| !! | TTTTCCATTTTGTAAATTGC+TGG | + | chr2_4:35879047-35879066 | None:intergenic | 25.0% |
| ! | TTGGAATTGAATCTTATGTA+AGG | + | chr2_4:35879338-35879357 | None:intergenic | 25.0% |
| ! | GTCATTGATATAGATTATGT+TGG | - | chr2_4:35879359-35879378 | Msa0326270:CDS | 25.0% |
| ! | GAAACGTTAGAGATAAATAA+AGG | - | chr2_4:35879618-35879637 | Msa0326270:CDS | 25.0% |
| !! | TCTCGAGTAAAACTATATTT+TGG | + | chr2_4:35879690-35879709 | None:intergenic | 25.0% |
| ! | TCAAAAATCAAGATACGATA+CGG | - | chr2_4:35880033-35880052 | Msa0326270:intron | 25.0% |
| ! | ACATTAATTGGGAAATATTG+GGG | - | chr2_4:35880362-35880381 | Msa0326270:intron | 25.0% |
| ! | TTATGGTATTACAGTCATAA+TGG | + | chr2_4:35880662-35880681 | None:intergenic | 25.0% |
| ! | AGAAAATGACATAGAAATGA+AGG | + | chr2_4:35880949-35880968 | None:intergenic | 25.0% |
| ! | ATCATAGTCTTTATAGACAA+AGG | - | chr2_4:35881184-35881203 | Msa0326270:CDS | 25.0% |
| !! | TCTAACTTCTTCTTTTCTTT+TGG | + | chr2_4:35881222-35881241 | None:intergenic | 25.0% |
| ! | ATTGTATGCTACTAAAACAA+AGG | + | chr2_4:35881252-35881271 | None:intergenic | 25.0% |
| ! | TATTATGTGTTCATTTCGAT+TGG | - | chr2_4:35881695-35881714 | Msa0326270:intron | 25.0% |
| ! | ATAATGTTAGTTATCTTTGG+CGG | - | chr2_4:35881939-35881958 | Msa0326270:intron | 25.0% |
| !! | CTTACATAAATTGAAGTGTT+TGG | + | chr2_4:35882412-35882431 | None:intergenic | 25.0% |
| ! | CTTGATAAGCTATTTATGTT+TGG | + | chr2_4:35882454-35882473 | None:intergenic | 25.0% |
| ! | ACAACTTATATAGATGCTTA+TGG | + | chr2_4:35882521-35882540 | None:intergenic | 25.0% |
| ! | TATAAGTTGTTTATCCAAAC+GGG | - | chr2_4:35882531-35882550 | Msa0326270:intron | 25.0% |
| ! | AAAATTGAATATATTCTGCG+GGG | + | chr2_4:35882600-35882619 | None:intergenic | 25.0% |
| ! | GAAAATTGAATATATTCTGC+GGG | + | chr2_4:35882601-35882620 | None:intergenic | 25.0% |
| ! | AAGTTAAAGCAAAGTTTGTA+AGG | + | chr2_4:35882635-35882654 | None:intergenic | 25.0% |
| ! | AAGATATTAACATGCAATCA+CGG | - | chr2_4:35882719-35882738 | Msa0326270:intron | 25.0% |
| !!! | AGTTTGTTATTCTTTGCATT+GGG | - | chr2_4:35882819-35882838 | Msa0326270:intron | 25.0% |
| ! | TTCAATCCATTAATTTCTAC+AGG | - | chr2_4:35883157-35883176 | Msa0326270:intron | 25.0% |
| ! | GTTCTATTTATAATTGTGCA+AGG | + | chr2_4:35883193-35883212 | None:intergenic | 25.0% |
| ! | TTATAAATAGAACTTCACAC+TGG | - | chr2_4:35883200-35883219 | Msa0326270:intron | 25.0% |
| !! | ACAATCTAAATTTTCAGAGA+TGG | - | chr2_4:35883477-35883496 | Msa0326270:intron | 25.0% |
| !! | CAATCTAAATTTTCAGAGAT+GGG | - | chr2_4:35883478-35883497 | Msa0326270:intron | 25.0% |
| !! | AATCTAAATTTTCAGAGATG+GGG | - | chr2_4:35883479-35883498 | Msa0326270:intron | 25.0% |
| ! | TTGTTGAAACATATCTGAAA+TGG | - | chr2_4:35883513-35883532 | Msa0326270:intron | 25.0% |
| ! | TCTTGAAGAAAACTATGATT+AGG | + | chr2_4:35883569-35883588 | None:intergenic | 25.0% |
| !!! | ATAACTACATCTGTTTCTAA+GGG | + | chr2_4:35883725-35883744 | None:intergenic | 25.0% |
| !!! | AATAACTACATCTGTTTCTA+AGG | + | chr2_4:35883726-35883745 | None:intergenic | 25.0% |
| !! | TTGAACTGTCAATGTAATTT+TGG | + | chr2_4:35883808-35883827 | None:intergenic | 25.0% |
| ! | AAAATTACATTGACAGTTCA+AGG | - | chr2_4:35883807-35883826 | Msa0326270:intron | 25.0% |
| !! | TGATCTCCAATAAAATTTTC+TGG | + | chr2_4:35884751-35884770 | None:intergenic | 25.0% |
| GAAAAAAGAGTTGCAATTGT+TGG | - | chr2_4:35879062-35879081 | Msa0326270:three_prime_UTR | 30.0% | |
| !!! | AAAATTGGTAGCCTTGTTTT+CGG | + | chr2_4:35879217-35879236 | None:intergenic | 30.0% |
| ! | ACCAATTTTCAGATTTTCCA+TGG | - | chr2_4:35879228-35879247 | Msa0326270:three_prime_UTR | 30.0% |
| ! | CCAATTTTCAGATTTTCCAT+GGG | - | chr2_4:35879229-35879248 | Msa0326270:three_prime_UTR | 30.0% |
| ! | TCTACAACTTGCTTATTACT+TGG | + | chr2_4:35879278-35879297 | None:intergenic | 30.0% |
| GAATCTTATGTAAGGAATGA+TGG | + | chr2_4:35879330-35879349 | None:intergenic | 30.0% | |
| TGATGAAGATATGAAGTCAT+GGG | - | chr2_4:35879388-35879407 | Msa0326270:CDS | 30.0% | |
| ATATGAAGTCATGGGAATTA+TGG | - | chr2_4:35879396-35879415 | Msa0326270:CDS | 30.0% | |
| TACCAAGAATTTCTCAACAA+AGG | - | chr2_4:35879475-35879494 | Msa0326270:CDS | 30.0% | |
| TACCTTTGTTGAGAAATTCT+TGG | + | chr2_4:35879480-35879499 | None:intergenic | 30.0% | |
| !!! | TTGGATTAGTGCTTCTTTTT+TGG | + | chr2_4:35880300-35880319 | None:intergenic | 30.0% |
| !! | AAAGAAGCACTAATCCAAAA+AGG | - | chr2_4:35880302-35880321 | Msa0326270:intron | 30.0% |
| TATCGGTGCATGATAATTAT+CGG | - | chr2_4:35880389-35880408 | Msa0326270:CDS | 30.0% | |
| !!! | GTCATCCCATTTTTAAGTAT+CGG | - | chr2_4:35880550-35880569 | Msa0326270:CDS | 30.0% |
| !!! | TCATCCCATTTTTAAGTATC+GGG | - | chr2_4:35880551-35880570 | Msa0326270:CDS | 30.0% |
| ! | ACAGGTGATAATGAAACAAA+GGG | - | chr2_4:35880579-35880598 | Msa0326270:CDS | 30.0% |
| TCATCTGCCACATTAATTTA+TGG | - | chr2_4:35880821-35880840 | Msa0326270:intron | 30.0% | |
| ATAGACAAAGGAAAAAGATC+TGG | - | chr2_4:35881196-35881215 | Msa0326270:CDS | 30.0% | |
| AGAAAAGAAGAAGTTAGAGA+AGG | - | chr2_4:35881224-35881243 | Msa0326270:CDS | 30.0% | |
| ! | ACATCAATTCGACATGTTTT+TGG | - | chr2_4:35881354-35881373 | Msa0326270:CDS | 30.0% |
| ! | ACACCTTTAAAAAGGCTTAT+GGG | + | chr2_4:35881752-35881771 | None:intergenic | 30.0% |
| ! | AACACCTTTAAAAAGGCTTA+TGG | + | chr2_4:35881753-35881772 | None:intergenic | 30.0% |
| !!! | TAAGCCTTTTTAAAGGTGTT+TGG | - | chr2_4:35881753-35881772 | Msa0326270:intron | 30.0% |
| !!! | AAGCCTTTTTAAAGGTGTTT+GGG | - | chr2_4:35881754-35881773 | Msa0326270:intron | 30.0% |
| ! | TTACCCAAACACCTTTAAAA+AGG | + | chr2_4:35881760-35881779 | None:intergenic | 30.0% |
| TATAGATGCTTATGGCATTA+GGG | + | chr2_4:35882513-35882532 | None:intergenic | 30.0% | |
| ATATAGATGCTTATGGCATT+AGG | + | chr2_4:35882514-35882533 | None:intergenic | 30.0% | |
| ATAAGTTGTTTATCCAAACG+GGG | - | chr2_4:35882532-35882551 | Msa0326270:intron | 30.0% | |
| CAAAGTTTGTAAGGACATAT+TGG | + | chr2_4:35882626-35882645 | None:intergenic | 30.0% | |
| GACTGAATGTTTACAATAAC+AGG | - | chr2_4:35882784-35882803 | Msa0326270:intron | 30.0% | |
| !! | GAGTTTGTTATTCTTTGCAT+TGG | - | chr2_4:35882818-35882837 | Msa0326270:intron | 30.0% |
| AATAAGAGAGTTACAGTAGT+AGG | - | chr2_4:35882971-35882990 | Msa0326270:intron | 30.0% | |
| GTGATTCCTGTAGAAATTAA+TGG | + | chr2_4:35883166-35883185 | None:intergenic | 30.0% | |
| TGTCCAAAATGTTGAAATCT+GGG | + | chr2_4:35883231-35883250 | None:intergenic | 30.0% | |
| ATGTCCAAAATGTTGAAATC+TGG | + | chr2_4:35883232-35883251 | None:intergenic | 30.0% | |
| GTATCTTACATTCTTACCAA+TGG | + | chr2_4:35883352-35883371 | None:intergenic | 30.0% | |
| GAAATATCTGCATGTCAAAT+TGG | - | chr2_4:35883587-35883606 | Msa0326270:intron | 30.0% | |
| CTTTGTCAAAAAAGGAATCA+GGG | + | chr2_4:35883619-35883638 | None:intergenic | 30.0% | |
| ACTTTGTCAAAAAAGGAATC+AGG | + | chr2_4:35883620-35883639 | None:intergenic | 30.0% | |
| TTGTGATTTCTTTATCTCGA+TGG | + | chr2_4:35883654-35883673 | None:intergenic | 30.0% | |
| GCAAAGTTACAACTAAAAAG+TGG | + | chr2_4:35884053-35884072 | None:intergenic | 30.0% | |
| CTAAAAGACACCTTCATAAA+AGG | - | chr2_4:35884072-35884091 | Msa0326270:intron | 30.0% | |
| !! | TATGTTTTTGTCACATGACA+AGG | - | chr2_4:35884273-35884292 | Msa0326270:intron | 30.0% |
| ! | TGAGAAACTTTTGACAAAGA+CGG | - | chr2_4:35884304-35884323 | Msa0326270:intron | 30.0% |
| ! | AGAAACTTTTGACAAAGACA+AGG | - | chr2_4:35884409-35884428 | Msa0326270:intron | 30.0% |
| ATTGCCTAGTATAAAAGAGA+TGG | - | chr2_4:35884683-35884702 | Msa0326270:intron | 30.0% | |
| ! | TTCTCCATCTCTTTTATACT+AGG | + | chr2_4:35884690-35884709 | None:intergenic | 30.0% |
| TAGTATAAAAGAGATGGAGA+AGG | - | chr2_4:35884689-35884708 | Msa0326270:intron | 30.0% | |
| TGGAGAAGGATGTTAAATTA+TGG | - | chr2_4:35884703-35884722 | Msa0326270:intron | 30.0% | |
| GGAGAAGGATGTTAAATTAT+GGG | - | chr2_4:35884704-35884723 | Msa0326270:intron | 30.0% | |
| ACAAGACCATTATAATCAGT+GGG | + | chr2_4:35884882-35884901 | None:intergenic | 30.0% | |
| AACAAGACCATTATAATCAG+TGG | + | chr2_4:35884883-35884902 | None:intergenic | 30.0% | |
| TGCAAATATGCTCTACAGAT+TGG | - | chr2_4:35879110-35879129 | Msa0326270:three_prime_UTR | 35.0% | |
| TCATCAGCTTCATATACAAC+AGG | + | chr2_4:35879143-35879162 | None:intergenic | 35.0% | |
| GTTGTATATGAAGCTGATGA+TGG | - | chr2_4:35879143-35879162 | Msa0326270:three_prime_UTR | 35.0% | |
| AAACTCCAAAACCGAAAACA+AGG | - | chr2_4:35879203-35879222 | Msa0326270:three_prime_UTR | 35.0% | |
| CCCATGGAAAATCTGAAAAT+TGG | + | chr2_4:35879232-35879251 | None:intergenic | 35.0% | |
| ! | TCTTTTACAGAAGAATCCCA+TGG | + | chr2_4:35879248-35879267 | None:intergenic | 35.0% |
| CTGATGAAGATATGAAGTCA+TGG | - | chr2_4:35879387-35879406 | Msa0326270:CDS | 35.0% | |
| !! | ATTTTACCGTATCGACGTAT+CGG | + | chr2_4:35880012-35880031 | None:intergenic | 35.0% |
| !!! | AGTACTGATGTGTTCCTTTT+TGG | + | chr2_4:35880319-35880338 | None:intergenic | 35.0% |
| !!! | CATCCCATTTTTAAGTATCG+GGG | - | chr2_4:35880552-35880571 | Msa0326270:CDS | 35.0% |
| AAGCCCCGATACTTAAAAAT+GGG | + | chr2_4:35880558-35880577 | None:intergenic | 35.0% | |
| ! | CACAGGTGATAATGAAACAA+AGG | - | chr2_4:35880578-35880597 | Msa0326270:CDS | 35.0% |
| ! | GTGATAATGAAACAAAGGGA+TGG | - | chr2_4:35880583-35880602 | Msa0326270:CDS | 35.0% |
| CTGTGGACCATAAATTAATG+TGG | + | chr2_4:35880831-35880850 | None:intergenic | 35.0% | |
| !! | TTAGACATGCATTGATTCGT+TGG | - | chr2_4:35881294-35881313 | Msa0326270:CDS | 35.0% |
| !! | TAGACATGCATTGATTCGTT+GGG | - | chr2_4:35881295-35881314 | Msa0326270:CDS | 35.0% |
| AGCAATTGAACTATCTACCT+TGG | - | chr2_4:35881326-35881345 | Msa0326270:CDS | 35.0% | |
| ATTGAACTATCTACCTTGGT+TGG | - | chr2_4:35881330-35881349 | Msa0326270:CDS | 35.0% | |
| TAAGACAGTGCAAATAGCAA+TGG | - | chr2_4:35881434-35881453 | Msa0326270:intron | 35.0% | |
| AAGACAGTGCAAATAGCAAT+GGG | - | chr2_4:35881435-35881454 | Msa0326270:intron | 35.0% | |
| TGGTGCAAAAGGAAAAATTG+AGG | - | chr2_4:35881488-35881507 | Msa0326270:intron | 35.0% | |
| ! | CCACTCATAAAATTCAGGTT+GGG | + | chr2_4:35881619-35881638 | None:intergenic | 35.0% |
| !!! | TGGCTTATTTTGAGCTTATG+TGG | - | chr2_4:35881715-35881734 | Msa0326270:intron | 35.0% |
| !!! | GGCTTATTTTGAGCTTATGT+GGG | - | chr2_4:35881716-35881735 | Msa0326270:intron | 35.0% |
| ! | ACTCCCATAAGCCTTTTTAA+AGG | - | chr2_4:35881746-35881765 | Msa0326270:intron | 35.0% |
| ! | TAAATTTTCAGCTTACCCTC+CGG | - | chr2_4:35881839-35881858 | Msa0326270:intron | 35.0% |
| TCATAAGTTCCTTGTTAAGC+CGG | + | chr2_4:35881861-35881880 | None:intergenic | 35.0% | |
| CTTTGCATTGGGAAATATAG+TGG | - | chr2_4:35882830-35882849 | Msa0326270:intron | 35.0% | |
| CCTTACCTGTAAAAACTTCT+GGG | + | chr2_4:35882892-35882911 | None:intergenic | 35.0% | |
| ACCTTACCTGTAAAAACTTC+TGG | + | chr2_4:35882893-35882912 | None:intergenic | 35.0% | |
| AGGTAAGGTTATGCATTCTA+TGG | - | chr2_4:35882904-35882923 | Msa0326270:intron | 35.0% | |
| ! | TCTCCCAGATTTCAACATTT+TGG | - | chr2_4:35883225-35883244 | Msa0326270:intron | 35.0% |
| ! | AACATTTTGGACATTCGTCT+CGG | - | chr2_4:35883238-35883257 | Msa0326270:intron | 35.0% |
| TACCAATGGTGAAAGTAAAG+TGG | + | chr2_4:35883338-35883357 | None:intergenic | 35.0% | |
| ATTCTTGCCACAGGATATAA+AGG | - | chr2_4:35883743-35883762 | Msa0326270:intron | 35.0% | |
| TTGCTAAAAGACACCTTCAT+GGG | + | chr2_4:35884069-35884088 | None:intergenic | 35.0% | |
| ATTGCTAAAAGACACCTTCA+TGG | + | chr2_4:35884009-35884028 | None:intergenic | 35.0% | |
| ! | CTAGAAGACACCTTTTATGA+AGG | + | chr2_4:35884085-35884104 | None:intergenic | 35.0% |
| ! | GGTGGTTTACTCAAGTATTT+TGG | + | chr2_4:35884142-35884161 | None:intergenic | 35.0% |
| ! | TCTTTGAGAGTGACTTACAA+AGG | + | chr2_4:35884178-35884197 | None:intergenic | 35.0% |
| ATATGTGTAAACCACCAAAC+TGG | + | chr2_4:35884496-35884515 | None:intergenic | 35.0% | |
| AATCTATGGTAAACCACTAC+AGG | - | chr2_4:35884538-35884557 | Msa0326270:intron | 35.0% | |
| GATGTATTATTTGCCTGTAG+TGG | + | chr2_4:35884554-35884573 | None:intergenic | 35.0% | |
| ATCCTATCATTGCCAATTGT+GGG | + | chr2_4:35884584-35884603 | None:intergenic | 35.0% | |
| TATCCTATCATTGCCAATTG+TGG | + | chr2_4:35884585-35884604 | None:intergenic | 35.0% | |
| CTAATGAAATGAGATGCCAA+TGG | - | chr2_4:35884631-35884650 | Msa0326270:intron | 35.0% | |
| CTAGAAAATGTGCTAACCAT+TGG | + | chr2_4:35884650-35884669 | None:intergenic | 35.0% | |
| ! | TGGTTAGCACATTTTCTAGA+TGG | - | chr2_4:35884651-35884670 | Msa0326270:intron | 35.0% |
| ! | AGATCATGCATTGTTACTTG+TGG | - | chr2_4:35884765-35884784 | Msa0326270:CDS | 35.0% |
| CTGAGCTATTTGAACCATAT+GGG | - | chr2_4:35884856-35884875 | Msa0326270:CDS | 35.0% | |
| ACGAGTCGATAAACTAAGAA+GGG | + | chr2_4:35885137-35885156 | None:intergenic | 35.0% | |
| TGATGTACTCAGATAGATGC+AGG | + | chr2_4:35879011-35879030 | None:intergenic | 40.0% | |
| GAGCATATTTGCAAGCAAGT+AGG | + | chr2_4:35879103-35879122 | None:intergenic | 40.0% | |
| !! | TATGAAGCTGATGATGGTGT+TGG | - | chr2_4:35879149-35879168 | Msa0326270:three_prime_UTR | 40.0% |
| AAGTCATGGGAATTATGGAG+TGG | - | chr2_4:35879401-35879420 | Msa0326270:CDS | 40.0% | |
| TGGGAATTATGGAGTGGTAA+TGG | - | chr2_4:35879407-35879426 | Msa0326270:CDS | 40.0% | |
| !!! | AGTGGTAATGGCAGTAGTTT+TGG | - | chr2_4:35879419-35879438 | Msa0326270:CDS | 40.0% |
| TGTAATATGCCATGTTCCCT+TGG | + | chr2_4:35879447-35879466 | None:intergenic | 40.0% | |
| TCCGTATCATATCTCGTATC+CGG | + | chr2_4:35879977-35879996 | None:intergenic | 40.0% | |
| AAATCAAGATACGATACGGC+TGG | - | chr2_4:35880037-35880056 | Msa0326270:intron | 40.0% | |
| AATCAAGATACGATACGGCT+GGG | - | chr2_4:35880038-35880057 | Msa0326270:intron | 40.0% | |
| !! | GCACTGATGATGCTCTTTTT+GGG | + | chr2_4:35880243-35880262 | None:intergenic | 40.0% |
| !!! | AGCACTGATGATGCTCTTTT+TGG | + | chr2_4:35880244-35880263 | None:intergenic | 40.0% |
| TAATTGGGAAATATTGGGGC+AGG | - | chr2_4:35880366-35880385 | Msa0326270:intron | 40.0% | |
| GATACTCTCCTGATACGTAT+CGG | - | chr2_4:35880480-35880499 | Msa0326270:CDS | 40.0% | |
| ATACTCTCCTGATACGTATC+GGG | - | chr2_4:35880481-35880500 | Msa0326270:CDS | 40.0% | |
| GAAGCCCCGATACTTAAAAA+TGG | + | chr2_4:35880559-35880578 | None:intergenic | 40.0% | |
| CATACCATGTTGAACATCTG+TGG | + | chr2_4:35880848-35880867 | None:intergenic | 40.0% | |
| CACAGATGTTCAACATGGTA+TGG | - | chr2_4:35880846-35880865 | Msa0326270:intron | 40.0% | |
| !! | AGACATGCATTGATTCGTTG+GGG | - | chr2_4:35881296-35881315 | Msa0326270:CDS | 40.0% |
| TGGAAAATTCCAAGATGTGC+AGG | - | chr2_4:35881551-35881570 | Msa0326270:intron | 40.0% | |
| ! | CCCAACCTGAATTTTATGAG+TGG | - | chr2_4:35881616-35881635 | Msa0326270:intron | 40.0% |
| GCCACTCATAAAATTCAGGT+TGG | + | chr2_4:35881620-35881639 | None:intergenic | 40.0% | |
| GACAGCCACTCATAAAATTC+AGG | + | chr2_4:35881624-35881643 | None:intergenic | 40.0% | |
| GGAGGGTAAGCTGAAAATTT+AGG | + | chr2_4:35881840-35881859 | None:intergenic | 40.0% | |
| ! | AAAGGCCCAGAAGTTTTTAC+AGG | - | chr2_4:35882884-35882903 | Msa0326270:intron | 40.0% |
| ! | CCCAGAAGTTTTTACAGGTA+AGG | - | chr2_4:35882889-35882908 | Msa0326270:intron | 40.0% |
| ! | TTCTATGGATTACTCTGCCT+TGG | - | chr2_4:35882919-35882938 | Msa0326270:intron | 40.0% |
| ACCATTTGCATTTGCGCATT+CGG | + | chr2_4:35883026-35883045 | None:intergenic | 40.0% | |
| !!! | GAACTTTTAGTTCACAAGCC+CGG | - | chr2_4:35883286-35883305 | Msa0326270:intron | 40.0% |
| GTGAAAGTAAAGTGGCCAAA+AGG | + | chr2_4:35883330-35883349 | None:intergenic | 40.0% | |
| AAGTTGCCACTGAAGAAGTA+TGG | - | chr2_4:35883536-35883555 | Msa0326270:intron | 40.0% | |
| ACTAGTCCATACTTCTTCAG+TGG | + | chr2_4:35883545-35883564 | None:intergenic | 40.0% | |
| ! | AGCTTTAGCTTCTGCAAAGA+AGG | - | chr2_4:35883674-35883693 | Msa0326270:intron | 40.0% |
| GATGTAGTTATTCTTGCCAC+AGG | - | chr2_4:35883734-35883753 | Msa0326270:intron | 40.0% | |
| TTGGTCACCTTTATATCCTG+TGG | + | chr2_4:35883753-35883772 | None:intergenic | 40.0% | |
| GTTCAAGGATTTCTCTCTAC+AGG | - | chr2_4:35883822-35883841 | Msa0326270:intron | 40.0% | |
| ! | TTTTAGCAATCCACACCTCA+AGG | - | chr2_4:35884019-35884038 | Msa0326270:intron | 40.0% |
| AAAGTGGAAATCACACCTTG+AGG | + | chr2_4:35884037-35884056 | None:intergenic | 40.0% | |
| TACAAAGGCAGGGATCAAAT+TGG | + | chr2_4:35884163-35884182 | None:intergenic | 40.0% | |
| ATCCCACAATTGGCAATGAT+AGG | - | chr2_4:35884579-35884598 | Msa0326270:intron | 40.0% | |
| GCAATGATAGGATATGCTGA+GGG | - | chr2_4:35884591-35884610 | Msa0326270:intron | 40.0% | |
| ! | GCATTGTTACTTGTGGCATA+TGG | - | chr2_4:35884772-35884791 | Msa0326270:CDS | 40.0% |
| GAGACATGAAATGTAATCCG+TGG | - | chr2_4:35884814-35884833 | Msa0326270:CDS | 40.0% | |
| ATGTAATCCGTGGAGAAAGA+AGG | - | chr2_4:35884824-35884843 | Msa0326270:CDS | 40.0% | |
| TGTAATCCGTGGAGAAAGAA+GGG | - | chr2_4:35884825-35884844 | Msa0326270:CDS | 40.0% | |
| AAAAGACCCTTCTTTCTCCA+CGG | + | chr2_4:35884834-35884853 | None:intergenic | 40.0% | |
| GCTGAGCTATTTGAACCATA+TGG | - | chr2_4:35884855-35884874 | Msa0326270:CDS | 40.0% | |
| TTATAATCAGTGGGCCCATA+TGG | + | chr2_4:35884873-35884892 | None:intergenic | 40.0% | |
| ! | TATGGGCCCACTGATTATAA+TGG | - | chr2_4:35884873-35884892 | Msa0326270:CDS | 40.0% |
| CACTTCAGCAGAATACATGT+TGG | - | chr2_4:35884958-35884977 | Msa0326270:CDS | 40.0% | |
| TTCAGCAGAATACATGTTGG+AGG | - | chr2_4:35884961-35884980 | Msa0326270:CDS | 40.0% | |
| TCAGCAGAATACATGTTGGA+GGG | - | chr2_4:35884962-35884981 | Msa0326270:CDS | 40.0% | |
| GACGAGTCGATAAACTAAGA+AGG | + | chr2_4:35885138-35885157 | None:intergenic | 40.0% | |
| !! | TTAGTTTATCGACTCGTCGA+TGG | - | chr2_4:35885140-35885159 | Msa0326270:CDS | 40.0% |
| AGAGTTGCAATTGTTGGTGC+AGG | - | chr2_4:35879068-35879087 | Msa0326270:three_prime_UTR | 45.0% | |
| ATTGTTGGTGCAGGAATCAG+TGG | - | chr2_4:35879077-35879096 | Msa0326270:three_prime_UTR | 45.0% | |
| ! | ATGATGGTGTTGGAGGACTA+TGG | - | chr2_4:35879159-35879178 | Msa0326270:three_prime_UTR | 45.0% |
| !!! | GGTAGCCTTGTTTTCGGTTT+TGG | + | chr2_4:35879211-35879230 | None:intergenic | 45.0% |
| !!! | TGGCAGTAGTTTTGGATCCA+AGG | - | chr2_4:35879427-35879446 | Msa0326270:CDS | 45.0% |
| !!! | GGCAGTAGTTTTGGATCCAA+GGG | - | chr2_4:35879428-35879447 | Msa0326270:CDS | 45.0% |
| !! | GTTTTGGATCCAAGGGAACA+TGG | - | chr2_4:35879435-35879454 | Msa0326270:CDS | 45.0% |
| GGGAACATGGCATATTACAG+TGG | - | chr2_4:35879448-35879467 | Msa0326270:CDS | 45.0% | |
| ! | AGCAACCGAGTTTTCCCTTT+CGG | - | chr2_4:35879928-35879947 | Msa0326270:intron | 45.0% |
| TATCCGGGCTTCACATATGT+GGG | + | chr2_4:35879961-35879980 | None:intergenic | 45.0% | |
| CCGTATCATATCTCGTATCC+GGG | + | chr2_4:35879976-35879995 | None:intergenic | 45.0% | |
| CCCGGATACGAGATATGATA+CGG | - | chr2_4:35879973-35879992 | Msa0326270:intron | 45.0% | |
| GGAAATATTGGGGCAGGTAT+CGG | - | chr2_4:35880372-35880391 | Msa0326270:intron | 45.0% | |
| GATACTCTCCTGCTACGTAT+CGG | - | chr2_4:35880411-35880430 | Msa0326270:CDS | 45.0% | |
| ATACTCTCCTGCTACGTATC+GGG | - | chr2_4:35880412-35880431 | Msa0326270:CDS | 45.0% | |
| ! | TGCTACGTATCGGGAAGTAT+CGG | - | chr2_4:35880421-35880440 | Msa0326270:CDS | 45.0% |
| GATACTTCCCGATACGTATC+AGG | + | chr2_4:35880491-35880510 | None:intergenic | 45.0% | |
| !! | GGGAAGTATCGAGCAAGTAT+CGG | - | chr2_4:35880501-35880520 | Msa0326270:CDS | 45.0% |
| !! | AGTATCGGTACATGATACGC+AGG | - | chr2_4:35880516-35880535 | Msa0326270:CDS | 45.0% |
| ! | GTATCGGTACATGATACGCA+GGG | - | chr2_4:35880517-35880536 | Msa0326270:CDS | 45.0% |
| TATCGGTACATGATACGCAG+GGG | - | chr2_4:35880518-35880537 | Msa0326270:CDS | 45.0% | |
| !! | TTTAAGTATCGGGGCTTCAC+AGG | - | chr2_4:35880561-35880580 | Msa0326270:CDS | 45.0% |
| TGGTCCACAGATGTTCAACA+TGG | - | chr2_4:35880841-35880860 | Msa0326270:intron | 45.0% | |
| ACGCAATAGCATTCTGAGTC+AGG | - | chr2_4:35880883-35880902 | Msa0326270:CDS | 45.0% | |
| !! | GACATGCATTGATTCGTTGG+GGG | - | chr2_4:35881297-35881316 | Msa0326270:CDS | 45.0% |
| TCGAATTGATGTGCCAACCA+AGG | + | chr2_4:35881346-35881365 | None:intergenic | 45.0% | |
| ATGTCCGTATCATAGTCTGC+TGG | - | chr2_4:35881468-35881487 | Msa0326270:intron | 45.0% | |
| TGCACCAGCAGACTATGATA+CGG | + | chr2_4:35881475-35881494 | None:intergenic | 45.0% | |
| TCATAGTCTGCTGGTGCAAA+AGG | - | chr2_4:35881477-35881496 | Msa0326270:intron | 45.0% | |
| AACCAACTTGACACTCGTAC+AGG | - | chr2_4:35881666-35881685 | Msa0326270:intron | 45.0% | |
| AAGTTCCTTGTTAAGCCGGA+GGG | + | chr2_4:35881857-35881876 | None:intergenic | 45.0% | |
| TAAGTTCCTTGTTAAGCCGG+AGG | + | chr2_4:35881858-35881877 | None:intergenic | 45.0% | |
| GATCTAGAGAGAATCGAAGG+AGG | + | chr2_4:35881894-35881913 | None:intergenic | 45.0% | |
| GTGGATCTAGAGAGAATCGA+AGG | + | chr2_4:35881897-35881916 | None:intergenic | 45.0% | |
| TTACACTCTTAGACCCCGTT+TGG | + | chr2_4:35882548-35882567 | None:intergenic | 45.0% | |
| ! | AAACTTCTGGGCCTTTTCCA+GGG | + | chr2_4:35882880-35882899 | None:intergenic | 45.0% |
| ! | AAAACTTCTGGGCCTTTTCC+AGG | + | chr2_4:35882881-35882900 | None:intergenic | 45.0% |
| AGCAGCAGTTTCTTTGTCCA+AGG | + | chr2_4:35882939-35882958 | None:intergenic | 45.0% | |
| AGAGTTACAGTAGTAGGCTC+AGG | - | chr2_4:35882977-35882996 | Msa0326270:intron | 45.0% | |
| !! | ACACTTCCTTCTTGGCCTTT+TGG | - | chr2_4:35883312-35883331 | Msa0326270:intron | 45.0% |
| ! | GGCCACTTTACTTTCACCAT+TGG | - | chr2_4:35883333-35883352 | Msa0326270:intron | 45.0% |
| CTAAAAGACACCTTCATGGG+TGG | + | chr2_4:35884005-35884024 | None:intergenic | 45.0% | |
| AAAGGCAGGGATCAAATTGG+TGG | + | chr2_4:35884160-35884179 | None:intergenic | 45.0% | |
| GAGAGTGACTTACAAAGGCA+GGG | + | chr2_4:35884173-35884192 | None:intergenic | 45.0% | |
| TGAGAGTGACTTACAAAGGC+AGG | + | chr2_4:35884174-35884193 | None:intergenic | 45.0% | |
| TAGAAAGACCGAGACCAGTT+TGG | - | chr2_4:35884479-35884498 | Msa0326270:intron | 45.0% | |
| ! | GTAAACCACCAAACTGGTCT+CGG | + | chr2_4:35884490-35884509 | None:intergenic | 45.0% |
| GGCAATGATAGGATATGCTG+AGG | - | chr2_4:35884590-35884609 | Msa0326270:intron | 45.0% | |
| CAGCAGAATACATGTTGGAG+GGG | - | chr2_4:35884963-35884982 | Msa0326270:CDS | 45.0% | |
| ! | ATACATGTTGGAGGGGTACA+TGG | - | chr2_4:35884970-35884989 | Msa0326270:CDS | 45.0% |
| ! | TAGAGAAAGCACAACACTCG+TGG | - | chr2_4:35885000-35885019 | Msa0326270:CDS | 45.0% |
| !!! | TAAAGTAAAAATTTAATTTA+TGG | + | chr2_4:35880679-35880698 | None:intergenic | 5.0% |
| !! | GAAGCTGATGATGGTGTTGG+AGG | - | chr2_4:35879152-35879171 | Msa0326270:three_prime_UTR | 50.0% |
| ! | ATGGTGTTGGAGGACTATGG+AGG | - | chr2_4:35879162-35879181 | Msa0326270:three_prime_UTR | 50.0% |
| ! | AACCGAGTTTTCCCTTTCGG+TGG | - | chr2_4:35879931-35879950 | Msa0326270:intron | 50.0% |
| CACCACCGAAAGGGAAAACT+CGG | + | chr2_4:35879936-35879955 | None:intergenic | 50.0% | |
| ATCCGGGCTTCACATATGTG+GGG | + | chr2_4:35879960-35879979 | None:intergenic | 50.0% | |
| GTATCCGGGCTTCACATATG+TGG | + | chr2_4:35879962-35879981 | None:intergenic | 50.0% | |
| ! | ACTGCACCGATACGTCGATA+CGG | - | chr2_4:35880003-35880022 | Msa0326270:intron | 50.0% |
| GATACTTCCCGATACGTAGC+AGG | + | chr2_4:35880422-35880441 | None:intergenic | 50.0% | |
| !! | ATGCATTGATTCGTTGGGGG+TGG | - | chr2_4:35881300-35881319 | Msa0326270:CDS | 50.0% |
| GACCTGTACGAGTGTCAAGT+TGG | + | chr2_4:35881671-35881690 | None:intergenic | 50.0% | |
| GGGAGGAACTCAGGAATGTT+TGG | + | chr2_4:35882860-35882879 | None:intergenic | 50.0% | |
| AACATTCCTGAGTTCCTCCC+TGG | - | chr2_4:35882860-35882879 | Msa0326270:intron | 50.0% | |
| GCCGAATGCGCAAATGCAAA+TGG | - | chr2_4:35883022-35883041 | Msa0326270:intron | 50.0% | |
| !! | CCAAGAAGGAAGTGTTCTCC+GGG | + | chr2_4:35883307-35883326 | None:intergenic | 50.0% |
| !! | GCCAAGAAGGAAGTGTTCTC+CGG | + | chr2_4:35883308-35883327 | None:intergenic | 50.0% |
| AAGTGGCCAAAAGGCCAAGA+AGG | + | chr2_4:35883321-35883340 | None:intergenic | 50.0% | |
| TTGCTAGAAGCCACCCATGA+AGG | - | chr2_4:35883992-35884011 | Msa0326270:intron | 50.0% | |
| GGAAATCACACCTTGAGGTG+TGG | + | chr2_4:35884032-35884051 | None:intergenic | 50.0% | |
| AAAGACCGAGACCAGTTTGG+TGG | - | chr2_4:35884482-35884501 | Msa0326270:intron | 50.0% | |
| ACATCCTCGCATCCCACAAT+TGG | - | chr2_4:35884569-35884588 | Msa0326270:intron | 50.0% | |
| ATTGCCAATTGTGGGATGCG+AGG | + | chr2_4:35884576-35884595 | None:intergenic | 50.0% | |
| ATGTGGGGACACCACCGAAA+GGG | + | chr2_4:35879945-35879964 | None:intergenic | 55.0% | |
| TATGTGGGGACACCACCGAA+AGG | + | chr2_4:35879946-35879965 | None:intergenic | 55.0% | |
| GTCCCCACATATGTGAAGCC+CGG | - | chr2_4:35879955-35879974 | Msa0326270:intron | 55.0% | |
| GCTTACCCTCCGGCTTAACA+AGG | - | chr2_4:35881849-35881868 | Msa0326270:intron | 55.0% | |
| ! | CCTTTTCCAGGGAGGAACTC+AGG | + | chr2_4:35882869-35882888 | None:intergenic | 55.0% |
| CCTGAGTTCCTCCCTGGAAA+AGG | - | chr2_4:35882866-35882885 | Msa0326270:intron | 55.0% | |
| CCCGGAGAACACTTCCTTCT+TGG | - | chr2_4:35883304-35883323 | Msa0326270:intron | 55.0% | |
| GGGTGTGCACCTGCACATCT+TGG | + | chr2_4:35881563-35881582 | None:intergenic | 60.0% | |
| TGCACACCCTCAATCCCAGC+TGG | - | chr2_4:35881574-35881593 | Msa0326270:intron | 60.0% | |
| ! | CTTCTGGGCCTTTTCCAGGG+AGG | + | chr2_4:35882877-35882896 | None:intergenic | 60.0% |
| GCGGAGCCAGCTGGGATTGA+GGG | + | chr2_4:35881583-35881602 | None:intergenic | 65.0% | |
| AGCGGAGCCAGCTGGGATTG+AGG | + | chr2_4:35881584-35881603 | None:intergenic | 65.0% | |
| !! | TTCAGGTTGGGCGCGAAGCC+AGG | + | chr2_4:35881607-35881626 | None:intergenic | 65.0% |
| ! | ATCCCAGCTGGCTCCGCTCC+TGG | - | chr2_4:35881586-35881605 | Msa0326270:intron | 70.0% |
| AGCCAGGAGCGGAGCCAGCT+GGG | + | chr2_4:35881591-35881610 | None:intergenic | 70.0% | |
| AAGCCAGGAGCGGAGCCAGC+TGG | + | chr2_4:35881592-35881611 | None:intergenic | 70.0% | |
| GTTGGGCGCGAAGCCAGGAG+CGG | + | chr2_4:35881602-35881621 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 35879002 | 35885221 | 35879002 | ID=Msa0326270;Name=Msa0326270 |
| chr2_4 | mRNA | 35879002 | 35885221 | 35879002 | ID=Msa0326270-mRNA-1;Parent=Msa0326270;Name=Msa0326270-mRNA-1;_AED=0.07;_eAED=0.07;_QI=57|0.6|0.83|0.83|1|1|6|310|542 |
| chr2_4 | exon | 35879002 | 35879663 | 35879002 | ID=Msa0326270-mRNA-1:exon:11062;Parent=Msa0326270-mRNA-1 |
| chr2_4 | exon | 35880380 | 35880729 | 35880380 | ID=Msa0326270-mRNA-1:exon:11061;Parent=Msa0326270-mRNA-1 |
| chr2_4 | exon | 35880869 | 35881044 | 35880869 | ID=Msa0326270-mRNA-1:exon:11060;Parent=Msa0326270-mRNA-1 |
| chr2_4 | exon | 35881180 | 35881417 | 35881180 | ID=Msa0326270-mRNA-1:exon:11059;Parent=Msa0326270-mRNA-1 |
| chr2_4 | exon | 35882576 | 35882650 | 35882576 | ID=Msa0326270-mRNA-1:exon:11058;Parent=Msa0326270-mRNA-1 |
| chr2_4 | exon | 35884727 | 35885221 | 35884727 | ID=Msa0326270-mRNA-1:exon:11057;Parent=Msa0326270-mRNA-1 |
| chr2_4 | five_prime_UTR | 35885165 | 35885221 | 35885165 | ID=Msa0326270-mRNA-1:five_prime_utr;Parent=Msa0326270-mRNA-1 |
| chr2_4 | CDS | 35884727 | 35885164 | 35884727 | ID=Msa0326270-mRNA-1:cds;Parent=Msa0326270-mRNA-1 |
| chr2_4 | CDS | 35882576 | 35882650 | 35882576 | ID=Msa0326270-mRNA-1:cds;Parent=Msa0326270-mRNA-1 |
| chr2_4 | CDS | 35881180 | 35881417 | 35881180 | ID=Msa0326270-mRNA-1:cds;Parent=Msa0326270-mRNA-1 |
| chr2_4 | CDS | 35880869 | 35881044 | 35880869 | ID=Msa0326270-mRNA-1:cds;Parent=Msa0326270-mRNA-1 |
| chr2_4 | CDS | 35880380 | 35880729 | 35880380 | ID=Msa0326270-mRNA-1:cds;Parent=Msa0326270-mRNA-1 |
| chr2_4 | CDS | 35879312 | 35879663 | 35879312 | ID=Msa0326270-mRNA-1:cds;Parent=Msa0326270-mRNA-1 |
| chr2_4 | three_prime_UTR | 35879002 | 35879311 | 35879002 | ID=Msa0326270-mRNA-1:three_prime_utr;Parent=Msa0326270-mRNA-1 |
| Gene Sequence |
| Protein sequence |
