Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0329880 | XP_007149284.1 | 74.359 | 78 | 20 | 0 | 45 | 122 | 1 | 78 | 4.45e-37 | 131 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0329880 | sp|Q9SKY1|CSTM4_ARATH | 47.436 | 78 | 34 | 3 | 45 | 122 | 1 | 71 | 6.45e-16 | 70.1 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0207260 | Msa0329880 | 0.803017 | 4.260012e-49 | -8.615850e-47 |
| Msa0253120 | Msa0329880 | 0.867364 | 1.444776e-65 | -8.615850e-47 |
| Msa0291900 | Msa0329880 | 0.861968 | 7.063186e-64 | -8.615850e-47 |
| Msa0291920 | Msa0329880 | 0.847175 | 1.365739e-59 | -8.615850e-47 |
| Msa0329880 | Msa0329890 | 0.830614 | 2.659815e-55 | -8.615850e-47 |
| Msa0329880 | Msa0481740 | 0.849998 | 2.255914e-60 | -8.615850e-47 |
| Msa0329880 | Msa0481770 | 0.809960 | 1.461215e-50 | -8.615850e-47 |
| Msa0329880 | Msa1080650 | 0.853880 | 1.783431e-61 | -8.615850e-47 |
| Msa0329880 | Msa1126440 | 0.853671 | 2.048447e-61 | -8.615850e-47 |
| Msa0329880 | Msa1453600 | 0.801105 | 1.053308e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0329880 | MtrunA17_Chr2g0312051 | 85.897 | 78 | 9 | 1 | 45 | 122 | 1 | 76 | 9.47e-35 | 115 |
| Msa0329880 | MtrunA17_Chr1g0166081 | 78.481 | 79 | 16 | 1 | 45 | 122 | 1 | 79 | 5.81e-34 | 113 |
| Msa0329880 | MtrunA17_Chr5g0417951 | 77.215 | 79 | 17 | 1 | 45 | 122 | 1 | 79 | 2.26e-33 | 111 |
| Msa0329880 | MtrunA17_Chr4g0048281 | 83.750 | 80 | 11 | 2 | 45 | 122 | 1 | 80 | 1.38e-31 | 107 |
| Msa0329880 | MtrunA17_Chr2g0312011 | 53.226 | 62 | 23 | 2 | 45 | 106 | 1 | 56 | 1.65e-12 | 58.5 |
| Msa0329880 | MtrunA17_Chr2g0312031 | 87.179 | 39 | 5 | 0 | 84 | 122 | 16 | 54 | 3.23e-11 | 54.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0329880 | AT2G32190.1 | 47.436 | 78 | 34 | 3 | 45 | 122 | 1 | 71 | 6.56e-17 | 70.1 |
| Msa0329880 | AT2G32210.1 | 47.436 | 78 | 34 | 3 | 45 | 122 | 1 | 71 | 7.98e-16 | 67.0 |
| Msa0329880 | AT2G32200.2 | 39.252 | 107 | 52 | 5 | 19 | 122 | 12 | 108 | 7.14e-14 | 63.2 |
| Msa0329880 | AT2G32200.1 | 41.975 | 81 | 37 | 4 | 45 | 122 | 1 | 74 | 2.75e-11 | 55.8 |
Find 41 sgRNAs with CRISPR-Local
Find 365 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGTAGTTTGTAGTTGAATA+AGG | 0.250204 | 2_4:+43837667 | Msa0329880:three_prime_UTR |
| GCTATGATTGAATTATTATA+TGG | 0.278884 | 2_4:+43837585 | Msa0329880:three_prime_UTR |
| CCTTGTGGTGAATATGATAC+TGG | 0.309515 | 2_4:-43832052 | None:intergenic |
| AAGGAAAGGAAAGAAGATTA+TGG | 0.335004 | 2_4:-43831960 | None:intergenic |
| CTGTGTACATATATACTATA+TGG | 0.352545 | 2_4:-43831899 | None:intergenic |
| CCAGGTGAGGCTTATTCTTC+AGG | 0.360974 | 2_4:+43837396 | Msa0329880:intron |
| CATCACCCCTGCTAGTAGTT+TGG | 0.398219 | 2_4:-43837500 | None:intergenic |
| AGTTATGTGATTGAAAAGTA+TGG | 0.415007 | 2_4:-43831930 | None:intergenic |
| GGTCTGGAATCCTTTGTTGA+GGG | 0.435636 | 2_4:-43837479 | None:intergenic |
| GGTGGTGGGGCAGTTACATA+TGG | 0.454046 | 2_4:-43837420 | None:intergenic |
| GAAGGATAACCCATTGGTGG+TGG | 0.456925 | 2_4:-43837435 | None:intergenic |
| TGTAACTGCCCCACCACCAA+TGG | 0.466214 | 2_4:+43837425 | Msa0329880:CDS |
| TAACTTCAACAATAAGCAAC+AGG | 0.473699 | 2_4:+43832027 | Msa0329880:CDS |
| CCCCTGCTAGTAGTTTGGTC+TGG | 0.475028 | 2_4:-43837495 | None:intergenic |
| TAGCTTAAAAGCATATATCA+AGG | 0.479451 | 2_4:-43837566 | None:intergenic |
| AATTATCAAAGAGTAGTTGA+AGG | 0.489037 | 2_4:-43831979 | None:intergenic |
| AACAAATAACATCCGTCGAA+TGG | 0.512786 | 2_4:-43837727 | None:intergenic |
| TCAAAGAGTAGTTGAAGGAA+AGG | 0.517988 | 2_4:-43831974 | None:intergenic |
| TTCCAGACCAAACTACTAGC+AGG | 0.528828 | 2_4:+43837493 | Msa0329880:CDS |
| ATCATAAAGTCTCAAATACA+AGG | 0.529572 | 2_4:-43837752 | None:intergenic |
| GTAACTGCCCCACCACCAAT+GGG | 0.530036 | 2_4:+43837426 | Msa0329880:CDS |
| GTATTTGTTTGTCCATTCGA+CGG | 0.532772 | 2_4:+43837715 | Msa0329880:three_prime_UTR |
| TGGTCTGGAATCCTTTGTTG+AGG | 0.537190 | 2_4:-43837480 | None:intergenic |
| CTTGTGGTGAATATGATACT+GGG | 0.546637 | 2_4:-43832051 | None:intergenic |
| CCTTCCAAGGATGTCTCTGA+AGG | 0.548959 | 2_4:+43837453 | Msa0329880:CDS |
| GTACCCTTCAGAGACATCCT+TGG | 0.558950 | 2_4:-43837457 | None:intergenic |
| AAGGATAACCCATTGGTGGT+GGG | 0.561789 | 2_4:-43837434 | None:intergenic |
| AGGATAACCCATTGGTGGTG+GGG | 0.564664 | 2_4:-43837433 | None:intergenic |
| TTGGAAGGATAACCCATTGG+TGG | 0.578593 | 2_4:-43837438 | None:intergenic |
| ACCAATGGGTTATCCTTCCA+AGG | 0.585220 | 2_4:+43837440 | Msa0329880:CDS |
| CAAACTACTAGCAGGGGTGA+TGG | 0.586318 | 2_4:+43837501 | Msa0329880:CDS |
| TCCAGACCAAACTACTAGCA+GGG | 0.592593 | 2_4:+43837494 | Msa0329880:CDS |
| TCCTTGGAAGGATAACCCAT+TGG | 0.604020 | 2_4:-43837441 | None:intergenic |
| CTTCCAAGGATGTCTCTGAA+GGG | 0.620825 | 2_4:+43837454 | Msa0329880:CDS |
| AGCTTAAAAGCATATATCAA+GGG | 0.622395 | 2_4:-43837565 | None:intergenic |
| CCAGTATCATATTCACCACA+AGG | 0.636014 | 2_4:+43832052 | Msa0329880:CDS |
| CCTTCAGAGACATCCTTGGA+AGG | 0.637821 | 2_4:-43837453 | None:intergenic |
| TCATAAAGTCTCAAATACAA+GGG | 0.650879 | 2_4:-43837751 | None:intergenic |
| CCAGACCAAACTACTAGCAG+GGG | 0.657589 | 2_4:+43837495 | Msa0329880:CDS |
| CTGAAGGGTACCCTCAACAA+AGG | 0.674821 | 2_4:+43837469 | Msa0329880:CDS |
| TTGTGGTGAATATGATACTG+GGG | 0.708147 | 2_4:-43832050 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATACAAATATATAAAAC+TGG | + | chr2_4:43832707-43832726 | Msa0329880:intron | 10.0% |
| !! | ATAAATAAATAAAAATTGAG+TGG | - | chr2_4:43834641-43834660 | None:intergenic | 10.0% |
| !!! | ATGAATTTTTATATTTTTAG+TGG | - | chr2_4:43835611-43835630 | None:intergenic | 10.0% |
| !!! | ATTTGTTTTTAAGTTATGAT+TGG | + | chr2_4:43832247-43832266 | Msa0329880:intron | 15.0% |
| !! | AAAAAAATTATCACAACATT+TGG | + | chr2_4:43832517-43832536 | Msa0329880:intron | 15.0% |
| !! | AAAAAATTATCACAACATTT+GGG | + | chr2_4:43832518-43832537 | Msa0329880:intron | 15.0% |
| !!! | GAATATAAAATAATTTTGCT+TGG | + | chr2_4:43833211-43833230 | Msa0329880:intron | 15.0% |
| !! | TTTATAATTTAGATTGCATA+TGG | - | chr2_4:43833443-43833462 | None:intergenic | 15.0% |
| !!! | ATTCTTAGAAAACTTTTTAA+AGG | + | chr2_4:43834287-43834306 | Msa0329880:intron | 15.0% |
| !! | AAATAAAATAAAAGAGAAGA+AGG | - | chr2_4:43834438-43834457 | None:intergenic | 15.0% |
| !!! | TTTATTTTATGTGATCATTT+TGG | + | chr2_4:43834451-43834470 | Msa0329880:intron | 15.0% |
| !! | AAAGTGAGTTAAAATTAAAT+TGG | - | chr2_4:43834706-43834725 | None:intergenic | 15.0% |
| !!! | ATATATATTGTTCTAAAATG+AGG | + | chr2_4:43834760-43834779 | Msa0329880:intron | 15.0% |
| !!! | TATATATTGTTCTAAAATGA+GGG | + | chr2_4:43834761-43834780 | Msa0329880:intron | 15.0% |
| !!! | ATAAAACTACTATTATCTTT+TGG | + | chr2_4:43835151-43835170 | Msa0329880:intron | 15.0% |
| !! | AATAAAATAAACAAAGCTAA+TGG | + | chr2_4:43835303-43835322 | Msa0329880:intron | 15.0% |
| !!! | ATTAGTTTTGCTTTTTTTTT+AGG | + | chr2_4:43835367-43835386 | Msa0329880:intron | 15.0% |
| !!! | TTAGTTTTGCTTTTTTTTTA+GGG | + | chr2_4:43835368-43835387 | Msa0329880:intron | 15.0% |
| !! | TTAAGTATATGGATAAAAAA+TGG | - | chr2_4:43835491-43835510 | None:intergenic | 15.0% |
| !!! | TTAACATAAGTTTTTAACAT+AGG | + | chr2_4:43836708-43836727 | Msa0329880:intron | 15.0% |
| !! | TTCTTATATAGAAATGTAAA+TGG | - | chr2_4:43836836-43836855 | None:intergenic | 15.0% |
| !!! | TAAGGAATTTTTTATCTTTT+TGG | + | chr2_4:43837685-43837704 | Msa0329880:three_prime_UTR | 15.0% |
| !! | AATTCACTTGTAAGAAAATA+AGG | + | chr2_4:43831767-43831786 | Msa0329880:intron | 20.0% |
| !!! | AATAAGGATTTTTATCTCTT+TGG | + | chr2_4:43832361-43832380 | Msa0329880:intron | 20.0% |
| !! | TATTTATTTGTCCATTTGAT+GGG | + | chr2_4:43832392-43832411 | Msa0329880:intron | 20.0% |
| !!! | ATGTTTTGATTGAAAATTGT+TGG | - | chr2_4:43832901-43832920 | None:intergenic | 20.0% |
| !!! | ATTTTCAATCAAAACATCAA+AGG | + | chr2_4:43832904-43832923 | Msa0329880:intron | 20.0% |
| !! | ATAAATCTACCTAAACATTA+TGG | + | chr2_4:43833012-43833031 | Msa0329880:intron | 20.0% |
| !!! | CAAATTATGTTTTGTGAATT+TGG | - | chr2_4:43834531-43834550 | None:intergenic | 20.0% |
| !!! | GCAAATATGTTACTTATTTT+AGG | - | chr2_4:43834731-43834750 | None:intergenic | 20.0% |
| !!! | TTTAGGGTTAAATATGTTTT+TGG | + | chr2_4:43835384-43835403 | Msa0329880:intron | 20.0% |
| !!! | TGGTGATTGAAAATTTTATA+TGG | - | chr2_4:43835471-43835490 | None:intergenic | 20.0% |
| !!! | ATAATGTTGACTTAAGTATA+TGG | - | chr2_4:43835502-43835521 | None:intergenic | 20.0% |
| !!! | ATTTGAGTTTACTTAAAATG+AGG | + | chr2_4:43835722-43835741 | Msa0329880:intron | 20.0% |
| !!! | AAAGTTTTTCATTTCACTTT+TGG | - | chr2_4:43835750-43835769 | None:intergenic | 20.0% |
| !!! | AAAGTGAAATGAAAAACTTT+TGG | + | chr2_4:43835750-43835769 | Msa0329880:intron | 20.0% |
| !!! | AAGTGAAATGAAAAACTTTT+GGG | + | chr2_4:43835751-43835770 | Msa0329880:intron | 20.0% |
| !! | CTTTGTAAAAATAGTGTTAT+TGG | - | chr2_4:43835888-43835907 | None:intergenic | 20.0% |
| !!! | TGTGCATTTTTTATTTTGTT+TGG | - | chr2_4:43835926-43835945 | None:intergenic | 20.0% |
| !! | TATATATAGGTTTCATTTGA+GGG | - | chr2_4:43837225-43837244 | None:intergenic | 20.0% |
| !! | AAGCAAAAATGTGTATATAT+AGG | - | chr2_4:43837238-43837257 | None:intergenic | 20.0% |
| !! | AGTTATGTGATTGAAAAATA+CGG | - | chr2_4:43837261-43837280 | None:intergenic | 20.0% |
| !! | GCTATGATTGAATTATTATA+TGG | + | chr2_4:43837585-43837604 | Msa0329880:three_prime_UTR | 20.0% |
| !! | GAATTTTTCCATTTGCATTA+AGG | + | chr2_4:43831874-43831893 | Msa0329880:intron | 25.0% |
| ! | CTGTGTACATATATACTATA+TGG | - | chr2_4:43831902-43831921 | None:intergenic | 25.0% |
| ! | AGTTATGTGATTGAAAAGTA+TGG | - | chr2_4:43831933-43831952 | None:intergenic | 25.0% |
| ! | AATTATCAAAGAGTAGTTGA+AGG | - | chr2_4:43831982-43832001 | None:intergenic | 25.0% |
| !! | TTGTAGTTTGTAGAAGAATA+AGG | + | chr2_4:43832345-43832364 | Msa0329880:intron | 25.0% |
| ! | GTATTTATTTGTCCATTTGA+TGG | + | chr2_4:43832391-43832410 | Msa0329880:intron | 25.0% |
| ! | TCATAAAGTCTCAAATACAT+GGG | - | chr2_4:43832430-43832449 | None:intergenic | 25.0% |
| ! | ATCATAAAGTCTCAAATACA+TGG | - | chr2_4:43832431-43832450 | None:intergenic | 25.0% |
| !!! | TTTATGATGTACTTGCTTTT+TGG | + | chr2_4:43832443-43832462 | Msa0329880:intron | 25.0% |
| ! | TTATAACAGTGATCTTGTAA+AGG | + | chr2_4:43832549-43832568 | Msa0329880:intron | 25.0% |
| !! | GGCTAATAATTAAGTACTTT+TGG | - | chr2_4:43832615-43832634 | None:intergenic | 25.0% |
| !!! | TTCATCAAAGTTTTTTAGAG+AGG | - | chr2_4:43832688-43832707 | None:intergenic | 25.0% |
| ! | TTTACTAAGCCATAATGTTT+AGG | - | chr2_4:43833024-43833043 | None:intergenic | 25.0% |
| ! | TTTGAGCAATCCTAATTAAA+TGG | + | chr2_4:43833053-43833072 | Msa0329880:intron | 25.0% |
| ! | AGTTGCAAAACCATTTAATT+AGG | - | chr2_4:43833066-43833085 | None:intergenic | 25.0% |
| ! | CTTTAATGAGAGTTATAACT+TGG | - | chr2_4:43833192-43833211 | None:intergenic | 25.0% |
| ! | AATGAATATCTCATGTTCAT+TGG | + | chr2_4:43833279-43833298 | Msa0329880:intron | 25.0% |
| ! | TAATTTAGATTGCATATGGA+TGG | - | chr2_4:43833439-43833458 | None:intergenic | 25.0% |
| !!! | GAATTTTAAGAATGCTAGTA+CGG | - | chr2_4:43833884-43833903 | None:intergenic | 25.0% |
| ! | TCTCTTTGTAAGAAATTCTT+TGG | + | chr2_4:43834332-43834351 | Msa0329880:intron | 25.0% |
| ! | AGGTCAAATTTGTAATTAAC+TGG | + | chr2_4:43834389-43834408 | Msa0329880:intron | 25.0% |
| ! | AAGGAAATAGAAATAGTTAG+GGG | - | chr2_4:43834571-43834590 | None:intergenic | 25.0% |
| ! | GAAGGAAATAGAAATAGTTA+GGG | - | chr2_4:43834572-43834591 | None:intergenic | 25.0% |
| ! | AGAAGGAAATAGAAATAGTT+AGG | - | chr2_4:43834573-43834592 | None:intergenic | 25.0% |
| !! | TGTATTTTCGTAATACATTG+CGG | - | chr2_4:43834598-43834617 | None:intergenic | 25.0% |
| ! | TACTAGTATGATCTATTTGA+GGG | - | chr2_4:43834668-43834687 | None:intergenic | 25.0% |
| ! | TTACTAGTATGATCTATTTG+AGG | - | chr2_4:43834669-43834688 | None:intergenic | 25.0% |
| ! | GATGTGGAAATATTATTTAG+AGG | - | chr2_4:43834835-43834854 | None:intergenic | 25.0% |
| ! | ACAATTAAATGTGGAGAAAT+GGG | + | chr2_4:43835021-43835040 | Msa0329880:intron | 25.0% |
| ! | ACATTGCATAATTTATGTAG+AGG | - | chr2_4:43835070-43835089 | None:intergenic | 25.0% |
| !! | AGTCGAAAGAAAATTTTAGA+GGG | - | chr2_4:43835442-43835461 | None:intergenic | 25.0% |
| !! | AAGTCGAAAGAAAATTTTAG+AGG | - | chr2_4:43835443-43835462 | None:intergenic | 25.0% |
| !! | AGTGAAATGAAAAACTTTTG+GGG | + | chr2_4:43835752-43835771 | Msa0329880:intron | 25.0% |
| !!! | AAGTCGAAGAAATTTTTTAG+AGG | + | chr2_4:43835781-43835800 | Msa0329880:intron | 25.0% |
| ! | CTATGACTTAAATATGTGAT+TGG | - | chr2_4:43835973-43835992 | None:intergenic | 25.0% |
| ! | CAATCACATATTTAAGTCAT+AGG | + | chr2_4:43835971-43835990 | Msa0329880:intron | 25.0% |
| ! | TTGTATTTAATCCTAAGTCA+AGG | - | chr2_4:43836077-43836096 | None:intergenic | 25.0% |
| !! | AAAGTAGAAAATTGTCACTT+TGG | + | chr2_4:43836202-43836221 | Msa0329880:intron | 25.0% |
| !!! | AGATTCAATTTTGGGATATT+GGG | - | chr2_4:43836236-43836255 | None:intergenic | 25.0% |
| ! | AGGATTTAGGGATTAAATTT+GGG | - | chr2_4:43836264-43836283 | None:intergenic | 25.0% |
| ! | AAGGATTTAGGGATTAAATT+TGG | - | chr2_4:43836265-43836284 | None:intergenic | 25.0% |
| ! | AGATGAGATTTAAGGATTTA+GGG | - | chr2_4:43836276-43836295 | None:intergenic | 25.0% |
| ! | TAGATGAGATTTAAGGATTT+AGG | - | chr2_4:43836277-43836296 | None:intergenic | 25.0% |
| !!! | AATTGATTTTGACCAAAAGA+GGG | - | chr2_4:43836303-43836322 | None:intergenic | 25.0% |
| !!! | AAATTGATTTTGACCAAAAG+AGG | - | chr2_4:43836304-43836323 | None:intergenic | 25.0% |
| !!! | TATTACACTTTTTGGAATTG+AGG | - | chr2_4:43836398-43836417 | None:intergenic | 25.0% |
| !! | GAAGGAAATATTACACTTTT+TGG | - | chr2_4:43836406-43836425 | None:intergenic | 25.0% |
| !!! | ATGTGTTTTAGTAGAGATTT+AGG | + | chr2_4:43836576-43836595 | Msa0329880:intron | 25.0% |
| !!! | TGTGTTTTAGTAGAGATTTA+GGG | + | chr2_4:43836577-43836596 | Msa0329880:intron | 25.0% |
| !! | AAAGTAGAAAACCTTCATTT+TGG | - | chr2_4:43836646-43836665 | None:intergenic | 25.0% |
| ! | TAAGAATGAGTAAAAAGACT+TGG | - | chr2_4:43836922-43836941 | None:intergenic | 25.0% |
| !! | GTCTTTTTACTCATTCTTAT+TGG | + | chr2_4:43836923-43836942 | Msa0329880:intron | 25.0% |
| !!! | TATTCCTTGTTTTCTTACAA+GGG | - | chr2_4:43837038-43837057 | None:intergenic | 25.0% |
| !!! | ATATTCCTTGTTTTCTTACA+AGG | - | chr2_4:43837039-43837058 | None:intergenic | 25.0% |
| ! | TAAGAAAGTAAAGTATAGGA+CGG | - | chr2_4:43837126-43837145 | None:intergenic | 25.0% |
| ! | GTATATATAGGTTTCATTTG+AGG | - | chr2_4:43837226-43837245 | None:intergenic | 25.0% |
| ! | ATATATCAAAGAGTTGTTGA+AGG | - | chr2_4:43837305-43837324 | None:intergenic | 25.0% |
| !! | AGCTTAAAAGCATATATCAA+GGG | - | chr2_4:43837568-43837587 | None:intergenic | 25.0% |
| !! | TAGCTTAAAAGCATATATCA+AGG | - | chr2_4:43837569-43837588 | None:intergenic | 25.0% |
| !! | TTGTAGTTTGTAGTTGAATA+AGG | + | chr2_4:43837667-43837686 | Msa0329880:three_prime_UTR | 25.0% |
| ! | TCATAAAGTCTCAAATACAA+GGG | - | chr2_4:43837754-43837773 | None:intergenic | 25.0% |
| ! | ATCATAAAGTCTCAAATACA+AGG | - | chr2_4:43832431-43832450 | None:intergenic | 25.0% |
| !!! | TTTATGATGTACTTGCTTTT+TGG | + | chr2_4:43832443-43832462 | Msa0329880:intron | 25.0% |
| TAAGAAAGCAAAGTATAGGA+CGG | - | chr2_4:43831823-43831842 | None:intergenic | 30.0% | |
| ATATGGTTCCTTAATGCAAA+TGG | - | chr2_4:43831885-43831904 | None:intergenic | 30.0% | |
| AAGGAAAGGAAAGAAGATTA+TGG | - | chr2_4:43831963-43831982 | None:intergenic | 30.0% | |
| TAACTTCAACAATAAGCAAC+AGG | + | chr2_4:43832027-43832046 | Msa0329880:CDS | 30.0% | |
| AACAAAAAACACCCATCAAA+TGG | - | chr2_4:43832406-43832425 | None:intergenic | 30.0% | |
| AATTATCACAACATTTGGGA+TGG | + | chr2_4:43832522-43832541 | Msa0329880:intron | 30.0% | |
| !!! | AAAGTTTTTTAGAGAGGAGT+GGG | - | chr2_4:43832682-43832701 | None:intergenic | 30.0% |
| AAATATATAAAACTGGACGC+AGG | + | chr2_4:43832714-43832733 | Msa0329880:intron | 30.0% | |
| AATATATAAAACTGGACGCA+GGG | + | chr2_4:43832715-43832734 | Msa0329880:intron | 30.0% | |
| TGTATTAGCTAGAATCAACT+TGG | + | chr2_4:43832934-43832953 | Msa0329880:intron | 30.0% | |
| ATATAGTTTCCTCAACATTC+TGG | + | chr2_4:43832964-43832983 | Msa0329880:intron | 30.0% | |
| ATTGCAAATCCTCTTTGATT+GGG | - | chr2_4:43833152-43833171 | None:intergenic | 30.0% | |
| TAATTAACCGTCAATCATAG+AGG | + | chr2_4:43833250-43833269 | Msa0329880:intron | 30.0% | |
| TGTAAATCCTCTATGATTGA+CGG | - | chr2_4:43833260-43833279 | None:intergenic | 30.0% | |
| ATAGAAACGAACTTACATTC+CGG | - | chr2_4:43833309-43833328 | None:intergenic | 30.0% | |
| TTCAATAATAGAGTCGACAT+AGG | + | chr2_4:43833522-43833541 | Msa0329880:intron | 30.0% | |
| AGAATCAGATGATTCTAATG+TGG | - | chr2_4:43833581-43833600 | None:intergenic | 30.0% | |
| AGCTTATAGAAACCACTAAA+AGG | + | chr2_4:43833796-43833815 | Msa0329880:intron | 30.0% | |
| TTATAGAAACCACTAAAAGG+AGG | + | chr2_4:43833799-43833818 | Msa0329880:intron | 30.0% | |
| ACATCAGATATTGGCAAAAT+TGG | + | chr2_4:43833832-43833851 | Msa0329880:intron | 30.0% | |
| ACAAGTAGGTAAACAAGTAA+AGG | - | chr2_4:43833987-43834006 | None:intergenic | 30.0% | |
| TTACTTGTTTACCTACTTGT+TGG | + | chr2_4:43833987-43834006 | Msa0329880:intron | 30.0% | |
| TACTTGTTTACCTACTTGTT+GGG | + | chr2_4:43833988-43834007 | Msa0329880:intron | 30.0% | |
| TACCAAATTAGAGAATCCTT+AGG | + | chr2_4:43834130-43834149 | Msa0329880:intron | 30.0% | |
| TTCCTAAGGATTCTCTAATT+TGG | - | chr2_4:43834135-43834154 | None:intergenic | 30.0% | |
| TCCTTAGGAAATCAAAGTTA+AGG | + | chr2_4:43834145-43834164 | Msa0329880:intron | 30.0% | |
| ! | TCCTTAACTTTGATTTCCTA+AGG | - | chr2_4:43834149-43834168 | None:intergenic | 30.0% |
| ! | AGTTAAGGATTGCTTACTTT+TGG | + | chr2_4:43834160-43834179 | Msa0329880:intron | 30.0% |
| !! | CTTACTTTTGGATAGAAACT+AGG | + | chr2_4:43834172-43834191 | Msa0329880:intron | 30.0% |
| ! | TTTTGGATAGAAACTAGGAT+CGG | + | chr2_4:43834177-43834196 | Msa0329880:intron | 30.0% |
| AAACACTTAGGAAACACTTT+GGG | + | chr2_4:43834201-43834220 | Msa0329880:intron | 30.0% | |
| TTACAAATTTGACCTACCTT+TGG | - | chr2_4:43834384-43834403 | None:intergenic | 30.0% | |
| AGGAAATAGAAATAGTTAGG+GGG | - | chr2_4:43834570-43834589 | None:intergenic | 30.0% | |
| ! | GTATTTTCGTAATACATTGC+GGG | - | chr2_4:43834597-43834616 | None:intergenic | 30.0% |
| ACTAGTATGATCTATTTGAG+GGG | - | chr2_4:43834667-43834686 | None:intergenic | 30.0% | |
| CACAATTAAATGTGGAGAAA+TGG | + | chr2_4:43835020-43835039 | Msa0329880:intron | 30.0% | |
| ! | GTGAAATGAAAAACTTTTGG+GGG | + | chr2_4:43835753-43835772 | Msa0329880:intron | 30.0% |
| TTTAATGTACCGTTAACAGA+AGG | + | chr2_4:43835861-43835880 | Msa0329880:intron | 30.0% | |
| !!! | CACTATTTTTACAAAGTGCA+TGG | + | chr2_4:43835892-43835911 | Msa0329880:intron | 30.0% |
| !!! | GAGATTCAATTTTGGGATAT+TGG | - | chr2_4:43836237-43836256 | None:intergenic | 30.0% |
| !! | GGGATTTGAGATTCAATTTT+GGG | - | chr2_4:43836244-43836263 | None:intergenic | 30.0% |
| !! | TGGGATTTGAGATTCAATTT+TGG | - | chr2_4:43836245-43836264 | None:intergenic | 30.0% |
| AGGGAATTAGATGAGATTTA+AGG | - | chr2_4:43836284-43836303 | None:intergenic | 30.0% | |
| !!! | TTTTGGAATTGAGGAGTAAA+AGG | - | chr2_4:43836389-43836408 | None:intergenic | 30.0% |
| ! | TTTTAGTAGAGAGTAAGATG+TGG | + | chr2_4:43836490-43836509 | Msa0329880:intron | 30.0% |
| TTAGGGATTGAGTTTCAATT+TGG | + | chr2_4:43836594-43836613 | Msa0329880:intron | 30.0% | |
| TCTAGAAAGACATGAATGTT+TGG | + | chr2_4:43836985-43837004 | Msa0329880:intron | 30.0% | |
| AATTCCCTTGTAAGAAAACA+AGG | + | chr2_4:43837031-43837050 | Msa0329880:intron | 30.0% | |
| TATACCGTATCAAGCATAAA+TGG | + | chr2_4:43837095-43837114 | Msa0329880:intron | 30.0% | |
| GTTTCCATTTATGCTTGATA+CGG | - | chr2_4:43837102-43837121 | None:intergenic | 30.0% | |
| CAGGTAAGAAAGTAAAGTAT+AGG | - | chr2_4:43837130-43837149 | None:intergenic | 30.0% | |
| ! | GAACTTTTCCATTTGCATTA+AGG | + | chr2_4:43837176-43837195 | Msa0329880:intron | 30.0% |
| AGGAAAGAAGATTATGGAAT+TGG | - | chr2_4:43831957-43831976 | None:intergenic | 30.0% | |
| TGTTGAAGGAAAGAAGATTA+TGG | - | chr2_4:43837291-43837310 | None:intergenic | 30.0% | |
| CAGGTAAGAAAGCAAAGTAT+AGG | - | chr2_4:43831827-43831846 | None:intergenic | 35.0% | |
| TCAAAGAGTAGTTGAAGGAA+AGG | - | chr2_4:43831977-43831996 | None:intergenic | 35.0% | |
| TTGTGGTGAATATGATACTG+GGG | - | chr2_4:43832053-43832072 | None:intergenic | 35.0% | |
| CTTGTGGTGAATATGATACT+GGG | - | chr2_4:43832054-43832073 | None:intergenic | 35.0% | |
| TAACAGTGATCTTGTAAAGG+AGG | + | chr2_4:43832552-43832571 | Msa0329880:intron | 35.0% | |
| GGGAATTTGTAAGAGATCAA+AGG | - | chr2_4:43832636-43832655 | None:intergenic | 35.0% | |
| AAACTAGGGTTTACCAAAAG+GGG | - | chr2_4:43832657-43832676 | None:intergenic | 35.0% | |
| CAAACTAGGGTTTACCAAAA+GGG | - | chr2_4:43832658-43832677 | None:intergenic | 35.0% | |
| !!! | AAGTTTTTTAGAGAGGAGTG+GGG | - | chr2_4:43832681-43832700 | None:intergenic | 35.0% |
| !!! | CAAAGTTTTTTAGAGAGGAG+TGG | - | chr2_4:43832683-43832702 | None:intergenic | 35.0% |
| ATATATAAAACTGGACGCAG+GGG | + | chr2_4:43832716-43832735 | Msa0329880:intron | 35.0% | |
| AAAGACCACTAAAAGTCGAA+AGG | + | chr2_4:43832787-43832806 | Msa0329880:intron | 35.0% | |
| CATTGCAAATCCTCTTTGAT+TGG | - | chr2_4:43833153-43833172 | None:intergenic | 35.0% | |
| TTTAGCTATGCGGAATGATT+TGG | - | chr2_4:43833641-43833660 | None:intergenic | 35.0% | |
| TCTTTACCATACACAGATGT+TGG | - | chr2_4:43833670-43833689 | None:intergenic | 35.0% | |
| GTGGTAAGAGATAATGAAGA+TGG | - | chr2_4:43833724-43833743 | None:intergenic | 35.0% | |
| TGATGCAACATGTTCAATAG+AGG | - | chr2_4:43833770-43833789 | None:intergenic | 35.0% | |
| GTCCAATGAACATCAGATAT+TGG | + | chr2_4:43833823-43833842 | Msa0329880:intron | 35.0% | |
| TGCCAATATCTGATGTTCAT+TGG | - | chr2_4:43833828-43833847 | None:intergenic | 35.0% | |
| ! | TCTTTGTGCCTTTTGAACAA+TGG | + | chr2_4:43833912-43833931 | Msa0329880:intron | 35.0% |
| TGTGACTACCATTGTTCAAA+AGG | - | chr2_4:43833923-43833942 | None:intergenic | 35.0% | |
| AATCCCCTCAAAACATTTCT+TGG | + | chr2_4:43833951-43833970 | Msa0329880:intron | 35.0% | |
| !! | TTGCCAAGAAATGTTTTGAG+GGG | - | chr2_4:43833957-43833976 | None:intergenic | 35.0% |
| !! | CTTGCCAAGAAATGTTTTGA+GGG | - | chr2_4:43833958-43833977 | None:intergenic | 35.0% |
| TCTTGTAGTGCAAGACAAAT+TGG | + | chr2_4:43834037-43834056 | Msa0329880:intron | 35.0% | |
| CTTGTAGTGCAAGACAAATT+GGG | + | chr2_4:43834038-43834057 | Msa0329880:intron | 35.0% | |
| TGCTTGTATATACAAGGTGT+TGG | + | chr2_4:43834064-43834083 | Msa0329880:intron | 35.0% | |
| !! | TGGTTTTCAGTTCTAACAAG+AGG | + | chr2_4:43834084-43834103 | Msa0329880:intron | 35.0% |
| TTTGGATAGAAACTAGGATC+GGG | + | chr2_4:43834178-43834197 | Msa0329880:intron | 35.0% | |
| GAAACACTTAGGAAACACTT+TGG | + | chr2_4:43834200-43834219 | Msa0329880:intron | 35.0% | |
| AACACTTAGGAAACACTTTG+GGG | + | chr2_4:43834202-43834221 | Msa0329880:intron | 35.0% | |
| GGATAAATCATTGAGTCTCT+TGG | + | chr2_4:43834223-43834242 | Msa0329880:intron | 35.0% | |
| !! | GAAATTCTTTGGTAGTGAGT+TGG | + | chr2_4:43834343-43834362 | Msa0329880:intron | 35.0% |
| CATACTAATACTTTGATGCG+TGG | - | chr2_4:43834499-43834518 | None:intergenic | 35.0% | |
| AACTAAACTTGTGAGTGATG+TGG | - | chr2_4:43834851-43834870 | None:intergenic | 35.0% | |
| AACTAAACTTGTGAGTGATG+TGG | - | chr2_4:43834851-43834870 | None:intergenic | 35.0% | |
| AGAGCTCACACAATTAAATG+TGG | + | chr2_4:43835012-43835031 | Msa0329880:intron | 35.0% | |
| ! | TATGCATTTTCACCGCATTT+TGG | + | chr2_4:43835193-43835212 | Msa0329880:intron | 35.0% |
| GTTATTGGTCCTTCTGTTAA+CGG | - | chr2_4:43835873-43835892 | None:intergenic | 35.0% | |
| !!! | ATTTTGGGATATTGGGTTCA+AGG | - | chr2_4:43836229-43836248 | None:intergenic | 35.0% |
| ! | TCTCATCTAATTCCCTCTTT+TGG | + | chr2_4:43836288-43836307 | Msa0329880:intron | 35.0% |
| GCACTTACACTATAGAATGA+AGG | - | chr2_4:43836424-43836443 | None:intergenic | 35.0% | |
| ! | TTGGCTTGACAAATATGACT+AGG | + | chr2_4:43836942-43836961 | Msa0329880:intron | 35.0% |
| CATTTGCATTAAGGAACCAT+CGG | + | chr2_4:43831883-43831902 | Msa0329880:intron | 35.0% | |
| ATTTGAGGGATGCTATAGTA+TGG | - | chr2_4:43837211-43837230 | None:intergenic | 35.0% | |
| GTATTTGTTTGTCCATTCGA+CGG | + | chr2_4:43837715-43837734 | Msa0329880:three_prime_UTR | 35.0% | |
| AACAAATAACATCCGTCGAA+TGG | - | chr2_4:43837730-43837749 | None:intergenic | 35.0% | |
| GTGTTGAATAAACGCGTTAC+AGG | - | chr2_4:43831846-43831865 | None:intergenic | 40.0% | |
| CCTTGTGGTGAATATGATAC+TGG | - | chr2_4:43832055-43832074 | None:intergenic | 40.0% | |
| CCAGTATCATATTCACCACA+AGG | + | chr2_4:43832052-43832071 | Msa0329880:CDS | 40.0% | |
| ATCATATTCACCACAAGGTG+AGG | + | chr2_4:43832057-43832076 | Msa0329880:intron | 40.0% | |
| ! | TATCACAACATTTGGGATGG+TGG | + | chr2_4:43832525-43832544 | Msa0329880:intron | 40.0% |
| ! | CTCTTACAAATTCCCCCTTT+TGG | + | chr2_4:43832641-43832660 | Msa0329880:intron | 40.0% |
| AACTAGGGTTTACCAAAAGG+GGG | - | chr2_4:43832656-43832675 | None:intergenic | 40.0% | |
| GCAAACTAGGGTTTACCAAA+AGG | - | chr2_4:43832659-43832678 | None:intergenic | 40.0% | |
| ! | ATGTGCCTTTCGACTTTTAG+TGG | - | chr2_4:43832795-43832814 | None:intergenic | 40.0% |
| TCGCAAAGTCTGAAGATGTT+GGG | - | chr2_4:43832870-43832889 | None:intergenic | 40.0% | |
| ATCGCAAAGTCTGAAGATGT+TGG | - | chr2_4:43832871-43832890 | None:intergenic | 40.0% | |
| CGTACTAAACCAGAATGTTG+AGG | - | chr2_4:43832976-43832995 | None:intergenic | 40.0% | |
| !! | TCTCATGTTCATTGGCTTTC+CGG | + | chr2_4:43833287-43833306 | Msa0329880:intron | 40.0% |
| ! | TTGGAGAAGCTTTAGCTATG+CGG | - | chr2_4:43833651-43833670 | None:intergenic | 40.0% |
| TTCAATAGAGGAGGGTAAGT+GGG | - | chr2_4:43833758-43833777 | None:intergenic | 40.0% | |
| GCAACATGTTCAATAGAGGA+GGG | - | chr2_4:43833766-43833785 | None:intergenic | 40.0% | |
| TGCAACATGTTCAATAGAGG+AGG | - | chr2_4:43833767-43833786 | None:intergenic | 40.0% | |
| ! | CCTTGCCAAGAAATGTTTTG+AGG | - | chr2_4:43833959-43833978 | None:intergenic | 40.0% |
| CCTCAAAACATTTCTTGGCA+AGG | + | chr2_4:43833956-43833975 | Msa0329880:intron | 40.0% | |
| ACAAGACTTACCCAACAAGT+AGG | - | chr2_4:43834001-43834020 | None:intergenic | 40.0% | |
| ! | ACTTGTTGGGTAAGTCTTGT+AGG | + | chr2_4:43834001-43834020 | Msa0329880:intron | 40.0% |
| CACTACAAGAAACAACCTTG+TGG | - | chr2_4:43834027-43834046 | None:intergenic | 40.0% | |
| GGGTGATGCTTGTATATACA+AGG | + | chr2_4:43834058-43834077 | Msa0329880:intron | 40.0% | |
| ! | TCAGTTCTAACAAGAGGTGA+AGG | + | chr2_4:43834090-43834109 | Msa0329880:intron | 40.0% |
| CAAATTTGACCTACCTTTGG+AGG | - | chr2_4:43834381-43834400 | None:intergenic | 40.0% | |
| ! | TTGTGTGAGCTCTAACTCTT+AGG | - | chr2_4:43835005-43835024 | None:intergenic | 40.0% |
| ! | TGAGCTTAACTCAGTTGGTA+GGG | - | chr2_4:43835093-43835112 | None:intergenic | 40.0% |
| TACCAACTGAGTTAAGCTCA+CGG | + | chr2_4:43835093-43835112 | Msa0329880:intron | 40.0% | |
| GCATAGACAATGCCAAAATG+CGG | - | chr2_4:43835208-43835227 | None:intergenic | 40.0% | |
| ! | AAAGCTAATGGTTTGCCATG+TGG | + | chr2_4:43835315-43835334 | Msa0329880:intron | 40.0% |
| CGTGGAATATTCAGTTCACA+TGG | + | chr2_4:43835338-43835357 | Msa0329880:intron | 40.0% | |
| ! | ATAACGGAACTGCACATTCA+GGG | - | chr2_4:43836106-43836125 | None:intergenic | 40.0% |
| TCCGTTATCAGTTTAGTCTC+TGG | + | chr2_4:43836118-43836137 | Msa0329880:intron | 40.0% | |
| GCCAGAGACTAAACTGATAA+CGG | - | chr2_4:43836122-43836141 | None:intergenic | 40.0% | |
| TGGAATTGAGGAGTAAAAGG+TGG | - | chr2_4:43836386-43836405 | None:intergenic | 40.0% | |
| CAGTTCAGTGACCAAAATGA+AGG | + | chr2_4:43836632-43836651 | Msa0329880:intron | 40.0% | |
| GTCATAAAAGTCTCTGACTC+AGG | - | chr2_4:43836783-43836802 | None:intergenic | 40.0% | |
| CGCTTCTCTCAATAGTCAAT+TGG | + | chr2_4:43836876-43836895 | Msa0329880:intron | 40.0% | |
| CGATGGTTCCTTAATGCAAA+TGG | - | chr2_4:43837187-43837206 | None:intergenic | 40.0% | |
| GAAGAATAAGCCTCACCTTG+TGG | - | chr2_4:43832070-43832089 | None:intergenic | 45.0% | |
| CAAGGTGAGGCTTATTCTTC+AGG | + | chr2_4:43832070-43832089 | Msa0329880:intron | 45.0% | |
| AAGGATAACCCATAGGTGGT+GGG | - | chr2_4:43832111-43832130 | None:intergenic | 45.0% | |
| TTGGAAGGATAACCCATAGG+TGG | - | chr2_4:43832115-43832134 | None:intergenic | 45.0% | |
| ! | ACCTATGGGTTATCCTTCCA+AGG | + | chr2_4:43832114-43832133 | Msa0329880:intron | 45.0% |
| TCCTTGGAAGGATAACCCAT+AGG | - | chr2_4:43832118-43832137 | None:intergenic | 45.0% | |
| GTATCCTTCAGAGCTATCCT+TGG | - | chr2_4:43832134-43832153 | None:intergenic | 45.0% | |
| CTGAAGGATACCCTCAACAA+AGG | + | chr2_4:43832143-43832162 | Msa0329880:intron | 45.0% | |
| ! | GGTCTGGAATCCTTTGTTGA+GGG | - | chr2_4:43832156-43832175 | None:intergenic | 45.0% |
| ! | TGGTCTGGAATCCTTTGTTG+AGG | - | chr2_4:43832157-43832176 | None:intergenic | 45.0% |
| !! | AGGGGTGATGGTTTTTGGAA+GGG | + | chr2_4:43832187-43832206 | Msa0329880:intron | 45.0% |
| AAACATGCACGAGGTGCATA+TGG | - | chr2_4:43832818-43832837 | None:intergenic | 45.0% | |
| CAACGACAAAAACATGCACG+AGG | - | chr2_4:43832827-43832846 | None:intergenic | 45.0% | |
| !! | ATGCTGACTCCCAATCAAAG+AGG | + | chr2_4:43833140-43833159 | Msa0329880:intron | 45.0% |
| GCTTCTCCAACATCTGTGTA+TGG | + | chr2_4:43833661-43833680 | Msa0329880:intron | 45.0% | |
| !! | TAAGTGGGGTATTGGTGTTG+TGG | - | chr2_4:43833743-43833762 | None:intergenic | 45.0% |
| TCAATAGAGGAGGGTAAGTG+GGG | - | chr2_4:43833757-43833776 | None:intergenic | 45.0% | |
| GTTCAATAGAGGAGGGTAAG+TGG | - | chr2_4:43833759-43833778 | None:intergenic | 45.0% | |
| ! | CATTGGACACCTCCTTTTAG+TGG | - | chr2_4:43833811-43833830 | None:intergenic | 45.0% |
| !! | TTGTTGGAAGCACTAAGTGG+AGG | - | chr2_4:43833859-43833878 | None:intergenic | 45.0% |
| !! | GTGTTGTTGGAAGCACTAAG+TGG | - | chr2_4:43833862-43833881 | None:intergenic | 45.0% |
| !! | GAATGCTAGTACGGTGTTGT+TGG | - | chr2_4:43833875-43833894 | None:intergenic | 45.0% |
| TCTAACAAGAGGTGAAGGTG+AGG | + | chr2_4:43834095-43834114 | Msa0329880:intron | 45.0% | |
| ACTAGGATCGGGAAACACTT+AGG | + | chr2_4:43834189-43834208 | Msa0329880:intron | 45.0% | |
| GAGAGATCTCTTTCCTCCAA+AGG | + | chr2_4:43834365-43834384 | Msa0329880:intron | 45.0% | |
| GATCTCTTTCCTCCAAAGGT+AGG | + | chr2_4:43834369-43834388 | Msa0329880:intron | 45.0% | |
| CGTAATACATTGCGGGAAGA+AGG | - | chr2_4:43834590-43834609 | None:intergenic | 45.0% | |
| GTGAGCTTAACTCAGTTGGT+AGG | - | chr2_4:43835094-43835113 | None:intergenic | 45.0% | |
| ACCAACTGAGTTAAGCTCAC+GGG | + | chr2_4:43835094-43835113 | Msa0329880:intron | 45.0% | |
| ACTGAATATTCCACGCCACA+TGG | - | chr2_4:43835333-43835352 | None:intergenic | 45.0% | |
| !! | GATAACGGAACTGCACATTC+AGG | - | chr2_4:43836107-43836126 | None:intergenic | 45.0% |
| ! | CTGATGATGTTACGTGCATG+AGG | - | chr2_4:43836688-43836707 | None:intergenic | 45.0% |
| ! | CAGAGACTTTTATGACAGCG+AGG | + | chr2_4:43836787-43836806 | Msa0329880:intron | 45.0% |
| GTGTTGAACAAACGCGTTAC+AGG | - | chr2_4:43837149-43837168 | None:intergenic | 45.0% | |
| !! | TGGTGGTGGATATGATACTG+GGG | - | chr2_4:43837379-43837398 | None:intergenic | 45.0% |
| !! | CTGGTGGTGGATATGATACT+GGG | - | chr2_4:43837380-43837399 | None:intergenic | 45.0% |
| ! | AAGGATAACCCATTGGTGGT+GGG | - | chr2_4:43837437-43837456 | None:intergenic | 45.0% |
| TTGGAAGGATAACCCATTGG+TGG | - | chr2_4:43837441-43837460 | None:intergenic | 45.0% | |
| !! | ACCAATGGGTTATCCTTCCA+AGG | + | chr2_4:43837440-43837459 | Msa0329880:CDS | 45.0% |
| TCCTTGGAAGGATAACCCAT+TGG | - | chr2_4:43832118-43832137 | None:intergenic | 45.0% | |
| CTTCCAAGGATGTCTCTGAA+GGG | + | chr2_4:43837454-43837473 | Msa0329880:CDS | 45.0% | |
| ! | GGTCTGGAATCCTTTGTTGA+GGG | - | chr2_4:43832156-43832175 | None:intergenic | 45.0% |
| ! | TGGTCTGGAATCCTTTGTTG+AGG | - | chr2_4:43832157-43832176 | None:intergenic | 45.0% |
| TTCCAGACCAAACTACTAGC+AGG | + | chr2_4:43837493-43837512 | Msa0329880:CDS | 45.0% | |
| TCCAGACCAAACTACTAGCA+GGG | + | chr2_4:43837494-43837513 | Msa0329880:CDS | 45.0% | |
| !! | AGGGGTGATGGTTTTTGGAA+GGG | + | chr2_4:43832187-43832206 | Msa0329880:intron | 45.0% |
| !!! | TTAAAATATTCTAATTTTTT+GGG | - | chr2_4:43835570-43835589 | None:intergenic | 5.0% |
| !!! | ATTAAAATATTCTAATTTTT+TGG | - | chr2_4:43835571-43835590 | None:intergenic | 5.0% |
| AGGATAACCCATAGGTGGTG+GGG | - | chr2_4:43832110-43832129 | None:intergenic | 50.0% | |
| GAAGGATAACCCATAGGTGG+TGG | - | chr2_4:43832112-43832131 | None:intergenic | 50.0% | |
| CCTTCAGAGCTATCCTTGGA+AGG | - | chr2_4:43832130-43832149 | None:intergenic | 50.0% | |
| !! | CCTTCCAAGGATAGCTCTGA+AGG | + | chr2_4:43832127-43832146 | Msa0329880:intron | 50.0% |
| TTCCAGACCAGACTACATCC+AGG | + | chr2_4:43832167-43832186 | Msa0329880:intron | 50.0% | |
| TCCAGACCAGACTACATCCA+GGG | + | chr2_4:43832168-43832187 | Msa0329880:intron | 50.0% | |
| !! | CATCCAGGGGTGATGGTTTT+TGG | + | chr2_4:43832182-43832201 | Msa0329880:intron | 50.0% |
| CTTCCAAAAACCATCACCCC+TGG | - | chr2_4:43832188-43832207 | None:intergenic | 50.0% | |
| !! | CAGGGGTGATGGTTTTTGGA+AGG | + | chr2_4:43832186-43832205 | Msa0329880:intron | 50.0% |
| ! | GGTAAGTCTTGTAGGCCACA+AGG | + | chr2_4:43834009-43834028 | Msa0329880:intron | 50.0% |
| AGGTGAAGGTGAGGCAAACT+CGG | + | chr2_4:43834104-43834123 | Msa0329880:intron | 50.0% | |
| !! | TGTGGAGAAATGGGAGTGTC+CGG | + | chr2_4:43835030-43835049 | Msa0329880:intron | 50.0% |
| CCAACTGAGTTAAGCTCACG+GGG | + | chr2_4:43835095-43835114 | Msa0329880:intron | 50.0% | |
| ! | TAATGGTTTGCCATGTGGCG+TGG | + | chr2_4:43835320-43835339 | Msa0329880:intron | 50.0% |
| GTCACAGAGGTCCTTGACTT+AGG | + | chr2_4:43836063-43836082 | Msa0329880:intron | 50.0% | |
| TCCCTGTGACAACTGATGCA+CGG | - | chr2_4:43836174-43836193 | None:intergenic | 50.0% | |
| ! | TACGTGCATGAGGTGTCACA+TGG | - | chr2_4:43836678-43836697 | None:intergenic | 50.0% |
| ATGACAGCGAGGTGTAGAGT+CGG | + | chr2_4:43836798-43836817 | Msa0329880:intron | 50.0% | |
| GGATGCTATAGTATGGCCGA+TGG | - | chr2_4:43837204-43837223 | None:intergenic | 50.0% | |
| !! | CCTGGTGGTGGATATGATAC+TGG | - | chr2_4:43837381-43837400 | None:intergenic | 50.0% |
| CCAGTATCATATCCACCACC+AGG | + | chr2_4:43837378-43837397 | Msa0329880:intron | 50.0% | |
| ATCATATCCACCACCAGGTG+AGG | + | chr2_4:43837383-43837402 | Msa0329880:intron | 50.0% | |
| GAAGAATAAGCCTCACCTGG+TGG | - | chr2_4:43837396-43837415 | None:intergenic | 50.0% | |
| CCTGAAGAATAAGCCTCACC+TGG | - | chr2_4:43832073-43832092 | None:intergenic | 50.0% | |
| CCAGGTGAGGCTTATTCTTC+AGG | + | chr2_4:43837396-43837415 | Msa0329880:intron | 50.0% | |
| !! | AGGATAACCCATTGGTGGTG+GGG | - | chr2_4:43837436-43837455 | None:intergenic | 50.0% |
| GAAGGATAACCCATTGGTGG+TGG | - | chr2_4:43837438-43837457 | None:intergenic | 50.0% | |
| CCTTCAGAGACATCCTTGGA+AGG | - | chr2_4:43837456-43837475 | None:intergenic | 50.0% | |
| CCTTCCAAGGATGTCTCTGA+AGG | + | chr2_4:43837453-43837472 | Msa0329880:CDS | 50.0% | |
| GTACCCTTCAGAGACATCCT+TGG | - | chr2_4:43837460-43837479 | None:intergenic | 50.0% | |
| !! | CTGAAGGGTACCCTCAACAA+AGG | + | chr2_4:43837469-43837488 | Msa0329880:CDS | 50.0% |
| CCAGACCAAACTACTAGCAG+GGG | + | chr2_4:43837495-43837514 | Msa0329880:CDS | 50.0% | |
| CATCACCCCTGCTAGTAGTT+TGG | - | chr2_4:43837503-43837522 | None:intergenic | 50.0% | |
| CAAACTACTAGCAGGGGTGA+TGG | + | chr2_4:43837501-43837520 | Msa0329880:CDS | 50.0% | |
| !! | CTAGCAGGGGTGATGGTTTT+TGG | + | chr2_4:43837508-43837527 | Msa0329880:CDS | 50.0% |
| !! | CAGGGGTGATGGTTTTTGGA+AGG | + | chr2_4:43832186-43832205 | Msa0329880:intron | 50.0% |
| !! | GGTGGTGGGGCAGTTACATA+TGG | - | chr2_4:43832097-43832116 | None:intergenic | 55.0% |
| TGTAACTGCCCCACCACCTA+TGG | + | chr2_4:43832099-43832118 | Msa0329880:intron | 55.0% | |
| GTAACTGCCCCACCACCTAT+GGG | + | chr2_4:43832100-43832119 | Msa0329880:intron | 55.0% | |
| CCAGACCAGACTACATCCAG+GGG | + | chr2_4:43832169-43832188 | Msa0329880:intron | 55.0% | |
| CATCACCCCTGGATGTAGTC+TGG | - | chr2_4:43832177-43832196 | None:intergenic | 55.0% | |
| CAGACTACATCCAGGGGTGA+TGG | + | chr2_4:43832175-43832194 | Msa0329880:intron | 55.0% | |
| GAGAGGAGTGGGGCAAACTA+GGG | - | chr2_4:43832671-43832690 | None:intergenic | 55.0% | |
| AGAGAGGAGTGGGGCAAACT+AGG | - | chr2_4:43832672-43832691 | None:intergenic | 55.0% | |
| ! | GTGTCGTTGTTGCTAGCTGC+TGG | - | chr2_4:43833702-43833721 | None:intergenic | 55.0% |
| GAGGAGGGTAAGTGGGGTAT+TGG | - | chr2_4:43833751-43833770 | None:intergenic | 55.0% | |
| GGTGAAGGTGAGGCAAACTC+GGG | + | chr2_4:43834105-43834124 | Msa0329880:intron | 55.0% | |
| !! | GTGGAGAAATGGGAGTGTCC+GGG | + | chr2_4:43835031-43835050 | Msa0329880:intron | 55.0% |
| !! | TGGAGAAATGGGAGTGTCCG+GGG | + | chr2_4:43835032-43835051 | Msa0329880:intron | 55.0% |
| AGAGGTGAGAGTTCGAACCC+CGG | - | chr2_4:43835052-43835071 | None:intergenic | 55.0% | |
| CCCCGTGAGCTTAACTCAGT+TGG | - | chr2_4:43835098-43835117 | None:intergenic | 55.0% | |
| TGCCGTGCATCAGTTGTCAC+AGG | + | chr2_4:43836169-43836188 | Msa0329880:intron | 55.0% | |
| GCCGTGCATCAGTTGTCACA+GGG | + | chr2_4:43836170-43836189 | Msa0329880:intron | 55.0% | |
| TGACAGCGAGGTGTAGAGTC+GGG | + | chr2_4:43836799-43836818 | Msa0329880:intron | 55.0% | |
| GAATAAGCCTCACCTGGTGG+TGG | - | chr2_4:43837393-43837412 | None:intergenic | 55.0% | |
| !! | GGTGGTGGGGCAGTTACATA+TGG | - | chr2_4:43832097-43832116 | None:intergenic | 55.0% |
| TGTAACTGCCCCACCACCAA+TGG | + | chr2_4:43837425-43837444 | Msa0329880:CDS | 55.0% | |
| GTAACTGCCCCACCACCAAT+GGG | + | chr2_4:43837426-43837445 | Msa0329880:CDS | 55.0% | |
| CCCCTGCTAGTAGTTTGGTC+TGG | - | chr2_4:43837498-43837517 | None:intergenic | 55.0% | |
| CCCCTGGATGTAGTCTGGTC+TGG | - | chr2_4:43832172-43832191 | None:intergenic | 60.0% | |
| ! | CAGGGGTGCGTCTCACACAA+GGG | + | chr2_4:43832733-43832752 | Msa0329880:intron | 60.0% |
| GGTGCGTCTCACACAAGGGA+TGG | + | chr2_4:43832737-43832756 | Msa0329880:intron | 60.0% | |
| GGATGGTCCAACTCGCGCAT+GGG | + | chr2_4:43832754-43832773 | Msa0329880:intron | 60.0% | |
| GATGGTCCAACTCGCGCATG+GGG | + | chr2_4:43832755-43832774 | Msa0329880:intron | 60.0% | |
| GGGATTCTGTCTCATGCGCG+AGG | - | chr2_4:43832850-43832869 | None:intergenic | 60.0% | |
| TCTGCACCTCGCTGTCACAG+AGG | + | chr2_4:43836050-43836069 | Msa0329880:intron | 60.0% | |
| CAAGGACCTCTGTGACAGCG+AGG | - | chr2_4:43836059-43836078 | None:intergenic | 60.0% | |
| GACAGCGAGGTGTAGAGTCG+GGG | + | chr2_4:43836800-43836819 | Msa0329880:intron | 60.0% | |
| ! | GCAGGGGTGCGTCTCACACA+AGG | + | chr2_4:43832732-43832751 | Msa0329880:intron | 65.0% |
| GGGATGGTCCAACTCGCGCA+TGG | + | chr2_4:43832753-43832772 | Msa0329880:intron | 65.0% | |
| CTACTGCCCCATGCGCGAGT+TGG | - | chr2_4:43832764-43832783 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 43831732 | 43837816 | 43831732 | ID=Msa0329880;Name=Msa0329880 |
| chr2_4 | mRNA | 43831732 | 43837816 | 43831732 | ID=Msa0329880-mRNA-1;Parent=Msa0329880;Name=Msa0329880-mRNA-1;_AED=0.33;_eAED=0.33;_QI=0|0.5|0.33|0.66|0|0|3|232|122 |
| chr2_4 | exon | 43831732 | 43831737 | 43831732 | ID=Msa0329880-mRNA-1:exon:13356;Parent=Msa0329880-mRNA-1 |
| chr2_4 | exon | 43831896 | 43832073 | 43831896 | ID=Msa0329880-mRNA-1:exon:13357;Parent=Msa0329880-mRNA-1 |
| chr2_4 | exon | 43837400 | 43837816 | 43837400 | ID=Msa0329880-mRNA-1:exon:13358;Parent=Msa0329880-mRNA-1 |
| chr2_4 | CDS | 43831732 | 43831737 | 43831732 | ID=Msa0329880-mRNA-1:cds;Parent=Msa0329880-mRNA-1 |
| chr2_4 | CDS | 43831896 | 43832073 | 43831896 | ID=Msa0329880-mRNA-1:cds;Parent=Msa0329880-mRNA-1 |
| chr2_4 | CDS | 43837400 | 43837584 | 43837400 | ID=Msa0329880-mRNA-1:cds;Parent=Msa0329880-mRNA-1 |
| chr2_4 | three_prime_UTR | 43837585 | 43837816 | 43837585 | ID=Msa0329880-mRNA-1:three_prime_utr;Parent=Msa0329880-mRNA-1 |
| Gene Sequence |
| Protein sequence |
