Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0344810 | XP_024635180.2 | 95.932 | 1180 | 41 | 3 | 1 | 1180 | 1 | 1173 | 0.0 | 2352 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0344810 | sp|A8MS85|SPT61_ARATH | 50.498 | 1004 | 456 | 17 | 197 | 1180 | 258 | 1240 | 0.0 | 937 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0344810 | A0A396IL41 | 96.041 | 1162 | 39 | 3 | 19 | 1180 | 105 | 1259 | 0.0 | 2316 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0008110 | Msa0344810 | 0.816641 | 4.980940e-52 | -8.615850e-47 |
| Msa0090400 | Msa0344810 | 0.805264 | 1.451757e-49 | -8.615850e-47 |
| Msa0137880 | Msa0344810 | 0.801000 | 1.106697e-48 | -8.615850e-47 |
| Msa0225460 | Msa0344810 | 0.816040 | 6.787463e-52 | -8.615850e-47 |
| Msa0267110 | Msa0344810 | 0.812826 | 3.486087e-51 | -8.615850e-47 |
| Msa0272580 | Msa0344810 | 0.802504 | 5.437276e-49 | -8.615850e-47 |
| Msa0288890 | Msa0344810 | 0.807757 | 4.325763e-50 | -8.615850e-47 |
| Msa0314340 | Msa0344810 | 0.812966 | 3.248695e-51 | -8.615850e-47 |
| Msa0344810 | Msa0397150 | 0.918759 | 1.048249e-86 | -8.615850e-47 |
| Msa0344810 | Msa0421450 | 0.848592 | 5.554777e-60 | -8.615850e-47 |
| Msa0344810 | Msa0442830 | 0.802824 | 4.670670e-49 | -8.615850e-47 |
| Msa0344810 | Msa0467440 | 0.818707 | 1.703146e-52 | -8.615850e-47 |
| Msa0344810 | Msa0643370 | 0.807456 | 5.011570e-50 | -8.615850e-47 |
| Msa0344810 | Msa0658240 | 0.806556 | 7.769053e-50 | -8.615850e-47 |
| Msa0344810 | Msa0683740 | 0.812450 | 4.214212e-51 | -8.615850e-47 |
| Msa0344810 | Msa0689520 | 0.805761 | 1.142042e-49 | -8.615850e-47 |
| Msa0344810 | Msa0880680 | 0.823614 | 1.259993e-53 | -8.615850e-47 |
| Msa0344810 | Msa0931740 | 0.800312 | 1.529033e-48 | -8.615850e-47 |
| Msa0344810 | Msa1031040 | 0.801719 | 7.885547e-49 | -8.615850e-47 |
| Msa0344810 | Msa1070130 | 0.803834 | 2.885793e-49 | -8.615850e-47 |
| Msa0344810 | Msa1162260 | 0.817743 | 2.814155e-52 | -8.615850e-47 |
| Msa0344810 | Msa1186520 | 0.853227 | 2.747182e-61 | -8.615850e-47 |
| Msa0344810 | Msa1234710 | 0.806713 | 7.196666e-50 | -8.615850e-47 |
| Msa0344810 | Msa1268670 | 0.812039 | 5.181541e-51 | -8.615850e-47 |
| Msa0344810 | Msa1369550 | 0.874030 | 9.284287e-68 | -8.615850e-47 |
| Msa0344810 | Msa1422420 | 0.806795 | 6.915700e-50 | -8.615850e-47 |
| Msa0344810 | Msa1443600 | 0.878187 | 3.440248e-69 | -8.615850e-47 |
| Msa0344810 | Msa1452750 | 0.822613 | 2.157070e-53 | -8.615850e-47 |
| Msa0344810 | Msa1462710 | 0.803150 | 3.999012e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0344810 | MtrunA17_Chr3g0080991 | 96.041 | 1162 | 39 | 3 | 19 | 1180 | 105 | 1259 | 0.0 | 2316 |
| Msa0344810 | MtrunA17_Chr7g0255431 | 47.567 | 1192 | 516 | 21 | 79 | 1180 | 93 | 1265 | 0.0 | 984 |
| Msa0344810 | MtrunA17_Chr7g0254591 | 49.776 | 446 | 204 | 8 | 747 | 1180 | 1 | 438 | 5.38e-120 | 384 |
| Msa0344810 | MtrunA17_Chr7g0254571 | 37.016 | 516 | 225 | 12 | 111 | 585 | 96 | 552 | 6.37e-83 | 281 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0344810 | AT1G65440.2 | 50.498 | 1004 | 456 | 17 | 197 | 1180 | 258 | 1240 | 0.0 | 937 |
| Msa0344810 | AT1G65440.4 | 50.498 | 1004 | 456 | 17 | 197 | 1180 | 258 | 1240 | 0.0 | 937 |
| Msa0344810 | AT1G65440.1 | 50.498 | 1004 | 456 | 17 | 197 | 1180 | 258 | 1240 | 0.0 | 937 |
| Msa0344810 | AT1G65440.3 | 50.498 | 1004 | 456 | 17 | 197 | 1180 | 229 | 1211 | 0.0 | 936 |
| Msa0344810 | AT1G63210.1 | 47.581 | 992 | 472 | 18 | 203 | 1180 | 67 | 1024 | 0.0 | 847 |
Find 262 sgRNAs with CRISPR-Local
Find 489 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCACCTTTGCAGTTCATTTC+TGG | 0.085759 | 3_1:-3636335 | Msa0344810:CDS |
| TGAAATATGGGATGCAATTT+TGG | 0.100494 | 3_1:-3638436 | Msa0344810:CDS |
| TCTTCACTTGCTAGGAAAAT+TGG | 0.141193 | 3_1:-3639228 | Msa0344810:CDS |
| CCAGCAGTATCAGCAAAATT+TGG | 0.150168 | 3_1:+3636164 | None:intergenic |
| GATATTTCCTTGACAATAAT+AGG | 0.169729 | 3_1:+3635539 | None:intergenic |
| CGACCAAAGGTTATTGTATT+AGG | 0.184237 | 3_1:-3638173 | Msa0344810:CDS |
| ACTTTAGAAGCTGTACTTAA+AGG | 0.203537 | 3_1:-3638992 | Msa0344810:CDS |
| AACTGGTCACTAATGAAATA+TGG | 0.205689 | 3_1:-3638449 | Msa0344810:CDS |
| CCAGACGCTGTGTGCTCTTT+TGG | 0.210612 | 3_1:+3640339 | None:intergenic |
| ATTGGAAATCCCGAGAAATT+TGG | 0.214365 | 3_1:-3639210 | Msa0344810:CDS |
| AGTAGGTATAGACATAAATT+TGG | 0.223898 | 3_1:-3636381 | Msa0344810:CDS |
| CCTTGTGCCAGTTCAGTTTA+GGG | 0.236731 | 3_1:+3639760 | None:intergenic |
| AATGCTTGTTGTAGTATCTT+TGG | 0.237507 | 3_1:+3639478 | None:intergenic |
| TCTTAAGCAGTGGTTATAAA+AGG | 0.260627 | 3_1:-3639296 | Msa0344810:CDS |
| TTGCAGTTCATTTCTGGTCT+TGG | 0.264882 | 3_1:-3636329 | Msa0344810:CDS |
| ATGACCAGCAGCGCAGAAAA+AGG | 0.267484 | 3_1:-3638232 | Msa0344810:CDS |
| AAACCCTTTCTTCAAGAGTT+AGG | 0.268380 | 3_1:-3643331 | Msa0344810:five_prime_UTR |
| GGAGGATATTGTTAGGTTCT+TGG | 0.268695 | 3_1:-3640003 | Msa0344810:CDS |
| TCAAAACTCTCCAGCAGTTT+TGG | 0.268774 | 3_1:+3636005 | None:intergenic |
| GTATGTCCGCAGCATATTTA+TGG | 0.271828 | 3_1:-3638834 | Msa0344810:CDS |
| GACGAAGAGCCTGTTGTCTA+TGG | 0.285490 | 3_1:-3640603 | Msa0344810:CDS |
| TGAACCTTGTTCATCATCTT+CGG | 0.292991 | 3_1:+3643259 | None:intergenic |
| TCAAGGAATTGGATATAAAA+TGG | 0.293751 | 3_1:-3639530 | Msa0344810:CDS |
| AGAGGTACTGTCTTGGAAAT+TGG | 0.295743 | 3_1:-3636480 | Msa0344810:CDS |
| GATTCCTTTCATGAATTTGC+TGG | 0.302137 | 3_1:-3638761 | Msa0344810:CDS |
| TACCATATTGTCTGGGAAAC+TGG | 0.308430 | 3_1:+3636702 | None:intergenic |
| ACAAGAGTCAACAGATAAAA+AGG | 0.308653 | 3_1:-3635502 | Msa0344810:CDS |
| ACCTTGTGCCAGTTCAGTTT+AGG | 0.309865 | 3_1:+3639759 | None:intergenic |
| TAAGCTGCGAGATACCTTTC+AGG | 0.311760 | 3_1:-3638859 | Msa0344810:CDS |
| CGGAGTAGTGGCTTGTTGTT+GGG | 0.313924 | 3_1:-3638357 | Msa0344810:CDS |
| CTCGCCATTGTTGCTCGAAA+TGG | 0.333554 | 3_1:+3643302 | None:intergenic |
| GCTGTATTTCCTTTCAATGT+AGG | 0.337554 | 3_1:+3638788 | None:intergenic |
| ATCAACTAGTCCACAGGATT+TGG | 0.342859 | 3_1:+3640037 | None:intergenic |
| AAACAAAGATCTGGCAAGTT+AGG | 0.346235 | 3_1:-3640366 | Msa0344810:CDS |
| GAACCTTGTTCATCATCTTC+GGG | 0.349638 | 3_1:+3643260 | None:intergenic |
| AAGTTGGACTGAAAACAAAA+AGG | 0.351330 | 3_1:-3636232 | Msa0344810:CDS |
| TGCATTCAATTGCGTATCAT+TGG | 0.357818 | 3_1:+3636049 | None:intergenic |
| GAGCTTGAGTCTGGAATATC+TGG | 0.365887 | 3_1:-3635747 | Msa0344810:CDS |
| GGACTACCAACAGTTGTATT+GGG | 0.368308 | 3_1:-3636773 | Msa0344810:CDS |
| CCATCTTCTCATCACTTGAT+AGG | 0.370241 | 3_1:+3636441 | None:intergenic |
| GCGGAGTAGTGGCTTGTTGT+TGG | 0.370922 | 3_1:-3638358 | Msa0344810:CDS |
| CTGCCAATGCATCCTGTATA+AGG | 0.374125 | 3_1:-3638148 | Msa0344810:CDS |
| TCTTGAGTTGGTTCCTGAAA+AGG | 0.374227 | 3_1:+3635873 | None:intergenic |
| TAACTTGCCAGATCTTTGTT+TGG | 0.375224 | 3_1:+3640368 | None:intergenic |
| ACTCTGGATAATCAAGGAAT+TGG | 0.378198 | 3_1:-3639541 | Msa0344810:CDS |
| GACGAGTTCTATATGGTAAC+TGG | 0.379500 | 3_1:-3635849 | Msa0344810:CDS |
| TTGGATGAGTTTGAGGTTGA+TGG | 0.380379 | 3_1:-3641341 | Msa0344810:CDS |
| CCGCAGCATATTTATGGATA+AGG | 0.381930 | 3_1:-3638828 | Msa0344810:CDS |
| AGCCAGTTTCCCAGACAATA+TGG | 0.385382 | 3_1:-3636704 | Msa0344810:intron |
| GCATTCTGTGAGCTTGAGTC+TGG | 0.387018 | 3_1:-3635756 | Msa0344810:CDS |
| CAATTGATTACCATATTGTC+TGG | 0.390352 | 3_1:+3636694 | None:intergenic |
| ATATTTCCTTGACAATAATA+GGG | 0.393331 | 3_1:+3635540 | None:intergenic |
| GTATCGAAGAAGAAAGTTCT+TGG | 0.395427 | 3_1:-3640106 | Msa0344810:CDS |
| TCAAGATGACGAGTTCTATA+TGG | 0.395741 | 3_1:-3635856 | Msa0344810:CDS |
| CGTGCTTCCTTCTCCATAGA+AGG | 0.399065 | 3_1:+3638497 | None:intergenic |
| CATTCATCTTTGCTTTCAAA+AGG | 0.402584 | 3_1:-3640393 | Msa0344810:CDS |
| GACTAGTTGATACAGTAAAC+AGG | 0.405986 | 3_1:-3640025 | Msa0344810:CDS |
| GTGGCTTGTTGTTGGGGAAA+TGG | 0.409421 | 3_1:-3638350 | Msa0344810:CDS |
| AGAAACAGGTGAATGCAAAA+AGG | 0.410900 | 3_1:-3635952 | Msa0344810:CDS |
| TTGGTTGATGTGATGCATGC+TGG | 0.411825 | 3_1:-3638284 | Msa0344810:CDS |
| TGTTCATCATCTTCGGGTTG+AGG | 0.414594 | 3_1:+3643266 | None:intergenic |
| CTGTATTTCCTTTCAATGTA+GGG | 0.414788 | 3_1:+3638789 | None:intergenic |
| CCTCAGCAAGGAAAGACATT+TGG | 0.415143 | 3_1:+3639442 | None:intergenic |
| TTCAGCCTTCTCGAGCATAA+TGG | 0.415416 | 3_1:+3639383 | None:intergenic |
| AACCCTTTCTTCAAGAGTTA+GGG | 0.415668 | 3_1:-3643330 | Msa0344810:five_prime_UTR |
| AACTCTTGAAGAAAGGGTTT+CGG | 0.417123 | 3_1:+3643334 | None:intergenic |
| CAGCAGTATCAGCAAAATTT+GGG | 0.418627 | 3_1:+3636165 | None:intergenic |
| TGGACTACCAACAGTTGTAT+TGG | 0.420379 | 3_1:-3636774 | Msa0344810:CDS |
| GTAGGTATAGACATAAATTT+GGG | 0.420607 | 3_1:-3636380 | Msa0344810:CDS |
| GTCTTGGAAATTGGACCCTC+TGG | 0.425727 | 3_1:-3636471 | Msa0344810:CDS |
| ATCTCCTCTGGAGATTCCTC+TGG | 0.427023 | 3_1:+3639046 | None:intergenic |
| AACTCCTTTACTGCATCTTC+AGG | 0.427702 | 3_1:+3638632 | None:intergenic |
| CCAAAAGAGCACACAGCGTC+TGG | 0.427909 | 3_1:-3640339 | Msa0344810:CDS |
| TGGTTCCTGAAAAGGGCTCC+TGG | 0.430062 | 3_1:+3635881 | None:intergenic |
| AACTAGAGAACCAAATTTCT+CGG | 0.431207 | 3_1:+3639200 | None:intergenic |
| GGGTTTCGGAGAAATGAAAT+TGG | 0.432377 | 3_1:+3643348 | None:intergenic |
| AGATGGTAAACAGGATGATT+CGG | 0.434782 | 3_1:-3639814 | Msa0344810:CDS |
| TCGATACTCATTCTGTCAAC+CGG | 0.435830 | 3_1:+3640122 | None:intergenic |
| GTCAAGAGAGCTGTGGCTCT+TGG | 0.436286 | 3_1:-3636557 | Msa0344810:CDS |
| AATTTATGTCTATACCTACT+TGG | 0.439873 | 3_1:+3636384 | None:intergenic |
| ACTGGTCACTAATGAAATAT+GGG | 0.442616 | 3_1:-3638448 | Msa0344810:CDS |
| AACCCTAACTCTTGAAGAAA+GGG | 0.445206 | 3_1:+3643328 | None:intergenic |
| CTTGAGTTGGTTCCTGAAAA+GGG | 0.445389 | 3_1:+3635874 | None:intergenic |
| CCTTTGGTCGATGAATTGAT+AGG | 0.445502 | 3_1:+3638186 | None:intergenic |
| CGAAAGGACTTGGCTAAAGT+TGG | 0.446624 | 3_1:-3636248 | Msa0344810:CDS |
| TCTTCTGAGAGATGGTAAAC+AGG | 0.447125 | 3_1:-3639823 | Msa0344810:CDS |
| TAAACAGGGAGGATATTGTT+AGG | 0.453049 | 3_1:-3640010 | Msa0344810:CDS |
| GTGAGTGAGTTTAAGAGTGT+TGG | 0.454625 | 3_1:-3635588 | Msa0344810:CDS |
| TCTGATGAAGACATACTATT+CGG | 0.455890 | 3_1:-3639271 | Msa0344810:CDS |
| TCGTCGTGTACTGGCTCGTC+AGG | 0.458630 | 3_1:-3635778 | Msa0344810:CDS |
| GTCCTCCTTCAACCTTATAC+AGG | 0.461022 | 3_1:+3638136 | None:intergenic |
| TATATTGAAGCCATCTCCTC+TGG | 0.461108 | 3_1:+3639034 | None:intergenic |
| ATTTGGGAAGTAGACATGAT+TGG | 0.464656 | 3_1:-3636364 | Msa0344810:CDS |
| TCTATATGGTAACTGGAGAA+AGG | 0.468639 | 3_1:-3635842 | Msa0344810:CDS |
| AGGGAAACCCTAAACTGAAC+TGG | 0.469379 | 3_1:-3639767 | Msa0344810:CDS |
| TCAAAATGATCCAAAACTGC+TGG | 0.469564 | 3_1:-3636015 | Msa0344810:CDS |
| TGGATGAGTTTGAGGTTGAT+GGG | 0.471340 | 3_1:-3641340 | Msa0344810:CDS |
| CAGAGAGTATTCGAAGGAAA+GGG | 0.471927 | 3_1:-3643121 | Msa0344810:CDS |
| CCTTCTTAATCCACTGGCAA+TGG | 0.474679 | 3_1:-3636528 | Msa0344810:CDS |
| TCTGTTGACTCTTGTAGACT+TGG | 0.474935 | 3_1:+3635510 | None:intergenic |
| GGCAACAGTTCGTCGTGTAC+TGG | 0.475576 | 3_1:-3635787 | Msa0344810:CDS |
| GGTCTTGGACCCACGAAAGC+TGG | 0.479550 | 3_1:-3636314 | Msa0344810:CDS |
| AAACCCTAACTCTTGAAGAA+AGG | 0.480108 | 3_1:+3643327 | None:intergenic |
| GATGGGCTTGAAACAGAAAC+AGG | 0.480576 | 3_1:-3635966 | Msa0344810:CDS |
| AAGGAACGTCTACTCAACTT+TGG | 0.480761 | 3_1:-3638571 | Msa0344810:CDS |
| GATTCAAGCGCTTGTTCTCA+CGG | 0.481931 | 3_1:+3641092 | None:intergenic |
| TTGACTCTTGTAGACTTGGC+AGG | 0.481933 | 3_1:+3635514 | None:intergenic |
| AGGCAAAAGAAGGTTTGAAA+TGG | 0.481958 | 3_1:+3638517 | None:intergenic |
| GCTCCTAATACAATAACCTT+TGG | 0.482145 | 3_1:+3638170 | None:intergenic |
| CTATATGGTAACTGGAGAAA+GGG | 0.484920 | 3_1:-3635841 | Msa0344810:CDS |
| TATTGGGGATATGCCGTTAA+CGG | 0.488452 | 3_1:-3635694 | Msa0344810:CDS |
| TCAACAGAATACCATGTGTC+TGG | 0.489297 | 3_1:+3638967 | None:intergenic |
| AACTGCAGATCAAGCAAAAG+AGG | 0.489335 | 3_1:-3635421 | Msa0344810:CDS |
| TGAAGACTTGGATGAGTTTG+AGG | 0.490670 | 3_1:-3641348 | Msa0344810:CDS |
| AGCATGACCTGCATCCTCTC+AGG | 0.492914 | 3_1:+3640258 | None:intergenic |
| TTAATTTCTACAGATAATTG+AGG | 0.493657 | 3_1:-3640162 | Msa0344810:intron |
| TCTCCCTTCCCATAGACAAC+AGG | 0.494222 | 3_1:+3640594 | None:intergenic |
| AAAGGAGCCAAACAAAGATC+TGG | 0.494932 | 3_1:-3640375 | Msa0344810:CDS |
| GAGAACAAGCGCTTGAATCA+AGG | 0.496708 | 3_1:-3641088 | Msa0344810:CDS |
| TTACGGTACATTGCAACAAA+CGG | 0.498236 | 3_1:+3639861 | None:intergenic |
| AGGTACAACATTTGTGATGT+TGG | 0.498437 | 3_1:-3638321 | Msa0344810:CDS |
| AGAGTGATGGAAAGTTGAAA+AGG | 0.498546 | 3_1:-3640952 | Msa0344810:CDS |
| ATCTGGAGTACTGTTTAAAG+AGG | 0.499398 | 3_1:-3635730 | Msa0344810:CDS |
| GATATAAATGAATATGCAGA+TGG | 0.500695 | 3_1:-3635984 | Msa0344810:CDS |
| ATGGGAAGGGAGATTCTCTC+AGG | 0.506294 | 3_1:-3640584 | Msa0344810:intron |
| TCTCCATAGAAGGCAAAAGA+AGG | 0.506399 | 3_1:+3638507 | None:intergenic |
| TAGTCCATTCATCTCTTGAC+TGG | 0.507009 | 3_1:+3636790 | None:intergenic |
| ATGAATTTGCTGGATTTAAG+TGG | 0.507407 | 3_1:-3638751 | Msa0344810:CDS |
| TATTCGGATTGTAGAAAGGC+AGG | 0.508061 | 3_1:-3639255 | Msa0344810:CDS |
| TGCATCCTGTATAAGGTTGA+AGG | 0.508542 | 3_1:-3638141 | Msa0344810:CDS |
| ACTAGAGAACCAAATTTCTC+GGG | 0.508997 | 3_1:+3639201 | None:intergenic |
| TCCATGGATTTAAAGATCCC+AGG | 0.511114 | 3_1:-3635899 | Msa0344810:CDS |
| CAAGCCTCTCTTGAAGTTCG+AGG | 0.512017 | 3_1:-3638720 | Msa0344810:CDS |
| TCAGAGAGTATTCGAAGGAA+AGG | 0.512319 | 3_1:-3643122 | Msa0344810:intron |
| TGGTTGATGTGATGCATGCT+GGG | 0.512645 | 3_1:-3638283 | Msa0344810:CDS |
| CTTTAGATGTCAGATTAACC+TGG | 0.513602 | 3_1:+3635610 | None:intergenic |
| CAGGATTGTCTTCACTTGCT+AGG | 0.513713 | 3_1:-3639236 | Msa0344810:CDS |
| GAGCAACATACCAGCTTTCG+TGG | 0.515063 | 3_1:+3636304 | None:intergenic |
| TACTGTATCAACTAGTCCAC+AGG | 0.515570 | 3_1:+3640031 | None:intergenic |
| GCAATAAAGAGGTACTGTCT+TGG | 0.517158 | 3_1:-3636487 | Msa0344810:CDS |
| GGTTGAAGGAGAAAGAGTTC+AGG | 0.517479 | 3_1:-3635808 | Msa0344810:CDS |
| ACGTTACCTTCTTAATCCAC+TGG | 0.517592 | 3_1:-3636534 | Msa0344810:CDS |
| CCTATCAAGTGATGAGAAGA+TGG | 0.519786 | 3_1:-3636441 | Msa0344810:CDS |
| AGAGGAATCTCCAGAGGAGA+TGG | 0.520306 | 3_1:-3639044 | Msa0344810:CDS |
| CAACCTTATACAGGATGCAT+TGG | 0.521654 | 3_1:+3638145 | None:intergenic |
| GTATTCGAAGGAAAGGGAAG+AGG | 0.522375 | 3_1:-3643115 | Msa0344810:CDS |
| GTTGCCTGAAGATGCAGTAA+AGG | 0.523381 | 3_1:-3638636 | Msa0344810:CDS |
| TGTGAGAAATCGAAAGGACT+TGG | 0.525259 | 3_1:-3636258 | Msa0344810:CDS |
| TGTTGGGGAAATGGTAAGCC+AGG | 0.525591 | 3_1:-3638341 | Msa0344810:CDS |
| GGTTCCTGAAAAGGGCTCCT+GGG | 0.526504 | 3_1:+3635882 | None:intergenic |
| TCCTGGGATCTTTAAATCCA+TGG | 0.529724 | 3_1:+3635898 | None:intergenic |
| TTACCATCTCTCAGAAGAGT+AGG | 0.533665 | 3_1:+3639828 | None:intergenic |
| ATTGGCATCAGCATAATGTC+TGG | 0.535113 | 3_1:+3636067 | None:intergenic |
| GCTGAACAGTGGATTTATGT+TGG | 0.535270 | 3_1:+3640064 | None:intergenic |
| AATTGATAAGAGTAGATGCC+AGG | 0.535752 | 3_1:-3635628 | Msa0344810:CDS |
| ACGTGCATTGTTAAATGCTA+AGG | 0.537262 | 3_1:-3638477 | Msa0344810:CDS |
| GCAGTTATATTCTGAAAATG+AGG | 0.538967 | 3_1:+3635438 | None:intergenic |
| GCAGCGTAAATTAATCCTGC+AGG | 0.539185 | 3_1:-3638543 | Msa0344810:CDS |
| GGTTTGAAATGGTATCCTGC+AGG | 0.539898 | 3_1:+3638528 | None:intergenic |
| GGAGTAGTGGCTTGTTGTTG+GGG | 0.543584 | 3_1:-3638356 | Msa0344810:CDS |
| TCAGCTAGCCCTACATTGAA+AGG | 0.543710 | 3_1:-3638797 | Msa0344810:CDS |
| CGGCGTAGATGCTGAGCCGA+TGG | 0.543912 | 3_1:-3640918 | Msa0344810:CDS |
| GAAAATACATCAATGGATGA+TGG | 0.543923 | 3_1:-3639792 | Msa0344810:CDS |
| GAGTAGGGCACTGTTCCTTA+CGG | 0.544223 | 3_1:+3639844 | None:intergenic |
| GATGAATTCTTGTACGGTCA+AGG | 0.545881 | 3_1:+3636135 | None:intergenic |
| CATTCAGAAGGCTGAAGAAG+AGG | 0.546756 | 3_1:-3638681 | Msa0344810:CDS |
| GTAGATACTCTGGATAATCA+AGG | 0.548046 | 3_1:-3639547 | Msa0344810:intron |
| TGCTGGATTTAAGTGGCTGA+AGG | 0.549082 | 3_1:-3638744 | Msa0344810:CDS |
| CCAAATGTCTTTCCTTGCTG+AGG | 0.551604 | 3_1:-3639442 | Msa0344810:CDS |
| TAGAACTCGTCATCTTGAGT+TGG | 0.553793 | 3_1:+3635861 | None:intergenic |
| ATACTATTCGGATTGTAGAA+AGG | 0.554308 | 3_1:-3639259 | Msa0344810:CDS |
| TTGCTCAGAGAATTACTTGG+AGG | 0.554698 | 3_1:-3636287 | Msa0344810:CDS |
| TACATCAATGGATGATGGTG+AGG | 0.557648 | 3_1:-3639787 | Msa0344810:CDS |
| TGATTCGGAAAATACATCAA+TGG | 0.559394 | 3_1:-3639799 | Msa0344810:CDS |
| AATTGATTACCATATTGTCT+GGG | 0.560866 | 3_1:+3636695 | None:intergenic |
| TATCTCGCAGCTTAACATCA+TGG | 0.562209 | 3_1:+3638868 | None:intergenic |
| TCAGCAAGACTATATGACTC+TGG | 0.562721 | 3_1:+3636113 | None:intergenic |
| TCAGTGGCTTCTCATTCAGA+AGG | 0.563445 | 3_1:-3638693 | Msa0344810:CDS |
| TGCCCTACTCTTCTGAGAGA+TGG | 0.563690 | 3_1:-3639831 | Msa0344810:CDS |
| ACGAAGAGCCTGTTGTCTAT+GGG | 0.564563 | 3_1:-3640602 | Msa0344810:CDS |
| TCAGATTATTTCCGTGATGT+CGG | 0.566770 | 3_1:-3636831 | Msa0344810:intron |
| GTTTGTTGCAATGTACCGTA+AGG | 0.569990 | 3_1:-3639859 | Msa0344810:CDS |
| CTGCTTAAGAATTCATCAGC+TGG | 0.572755 | 3_1:+3639309 | None:intergenic |
| TGCAAAAGAGCGCGGAGTAG+TGG | 0.573583 | 3_1:-3638369 | Msa0344810:CDS |
| AGAGCCTGTTGTCTATGGGA+AGG | 0.574627 | 3_1:-3640598 | Msa0344810:CDS |
| ACTCTGGATGAATTCTTGTA+CGG | 0.577408 | 3_1:+3636129 | None:intergenic |
| ATGTTGCTCAGAGAATTACT+TGG | 0.577760 | 3_1:-3636290 | Msa0344810:CDS |
| AAATATGCACGTAGCTGGAG+AGG | 0.580413 | 3_1:-3640307 | Msa0344810:CDS |
| GACGCCAGTCAAGAGATGAA+TGG | 0.583068 | 3_1:-3636794 | Msa0344810:CDS |
| AATATGCACGTAGCTGGAGA+GGG | 0.584432 | 3_1:-3640306 | Msa0344810:CDS |
| ATGGATCCCTATTATTGTCA+AGG | 0.584845 | 3_1:-3635546 | Msa0344810:CDS |
| GAGCCTGTTGTCTATGGGAA+GGG | 0.585027 | 3_1:-3640597 | Msa0344810:CDS |
| AGGTGTTGTGCTTAAATGCA+AGG | 0.588731 | 3_1:-3635658 | Msa0344810:CDS |
| GCTGATGAATTCTTAAGCAG+TGG | 0.590090 | 3_1:-3639306 | Msa0344810:CDS |
| AGACTTACCTGAGAGGATGC+AGG | 0.592486 | 3_1:-3640265 | Msa0344810:intron |
| TTCAGCGAGGCCAAATCCTG+TGG | 0.592664 | 3_1:-3640047 | Msa0344810:CDS |
| AGAAGATGGAGATGATCGAA+TGG | 0.594168 | 3_1:-3636427 | Msa0344810:CDS |
| AATGTTGAAGATGAAGAAGA+TGG | 0.594248 | 3_1:-3641305 | Msa0344810:CDS |
| AAATCCAGCAAATTCATGAA+AGG | 0.594716 | 3_1:+3638757 | None:intergenic |
| TATATGGTAACTGGAGAAAG+GGG | 0.596000 | 3_1:-3635840 | Msa0344810:CDS |
| GATTTGGCCTCGCTGAACAG+TGG | 0.598299 | 3_1:+3640053 | None:intergenic |
| GACTACCAACAGTTGTATTG+GGG | 0.598863 | 3_1:-3636772 | Msa0344810:CDS |
| CTGCGGACATACTTCCTGAA+AGG | 0.601305 | 3_1:+3638845 | None:intergenic |
| AAAATTGTCCTCCGACATCA+CGG | 0.601650 | 3_1:+3636820 | None:intergenic |
| CTTAAGAATTCATCAGCTGG+TGG | 0.603890 | 3_1:+3639312 | None:intergenic |
| CAGATAATTGAGGACACTGT+AGG | 0.604229 | 3_1:-3640152 | Msa0344810:CDS |
| TATAGATGTGAGAAATCGAA+AGG | 0.604838 | 3_1:-3636264 | Msa0344810:CDS |
| TACCATCTCTCAGAAGAGTA+GGG | 0.606774 | 3_1:+3639829 | None:intergenic |
| CCCTAAACTGAACTGGCACA+AGG | 0.608563 | 3_1:-3639760 | Msa0344810:intron |
| CCTATCAATTCATCGACCAA+AGG | 0.611680 | 3_1:-3638186 | Msa0344810:CDS |
| AACATCACAAATGTTGTACC+TGG | 0.613162 | 3_1:+3638323 | None:intergenic |
| AATGGCTACATCTTCAGAAG+CGG | 0.615564 | 3_1:-3639512 | Msa0344810:CDS |
| GATTATTTCCGTGATGTCGG+AGG | 0.615682 | 3_1:-3636828 | Msa0344810:CDS |
| AGACCAGAAATGAACTGCAA+AGG | 0.616958 | 3_1:+3636332 | None:intergenic |
| ATATAAATGAATATGCAGAT+GGG | 0.617588 | 3_1:-3635983 | Msa0344810:CDS |
| ACATCAATGGATGATGGTGA+GGG | 0.617779 | 3_1:-3639786 | Msa0344810:CDS |
| ATAAGGATGGAACTACTCCA+TGG | 0.618468 | 3_1:-3635915 | Msa0344810:CDS |
| TTTGTGATGTTGGATTCGAA+AGG | 0.618630 | 3_1:-3638311 | Msa0344810:CDS |
| ACTCTGTGGAGGCAATAAAG+AGG | 0.618711 | 3_1:-3636498 | Msa0344810:CDS |
| ACTTAAAGGCGCCAGACACA+TGG | 0.620174 | 3_1:-3638978 | Msa0344810:intron |
| TCTAGTTACTCTTAACGAAG+CGG | 0.622164 | 3_1:-3639184 | Msa0344810:intron |
| TGGTGAAGCAGATGAAGACT+TGG | 0.622179 | 3_1:-3641360 | Msa0344810:intron |
| CATCCTTATGTCCAAAAGAG+TGG | 0.622279 | 3_1:+3635929 | None:intergenic |
| GAATAGTATGTCTTCATCAG+AGG | 0.622934 | 3_1:+3639273 | None:intergenic |
| AGTGTTGCAACCATTGCCAG+TGG | 0.623310 | 3_1:+3636518 | None:intergenic |
| TCGTCAGAAGAATGTTCCAT+CGG | 0.623346 | 3_1:+3640902 | None:intergenic |
| GATGAATTGATAGGAACTTG+AGG | 0.623837 | 3_1:+3638195 | None:intergenic |
| GTTGGATTCGAAAGGCGAGT+TGG | 0.623913 | 3_1:-3638303 | Msa0344810:CDS |
| GCTTCTACTGTTGATGACGA+TGG | 0.625449 | 3_1:-3643086 | Msa0344810:intron |
| ATATGGTAACTGGAGAAAGG+GGG | 0.625641 | 3_1:-3635839 | Msa0344810:CDS |
| ATAGATATTACAAACCAAGT+AGG | 0.626669 | 3_1:-3636398 | Msa0344810:CDS |
| GCAATGGTTGCAACACTCTG+TGG | 0.629482 | 3_1:-3636512 | Msa0344810:CDS |
| GGTTAGTGAAGAAGATCCAG+AGG | 0.641902 | 3_1:-3639062 | Msa0344810:CDS |
| TATGGTAACTGGAGAAAGGG+GGG | 0.644601 | 3_1:-3635838 | Msa0344810:CDS |
| CAACCCGAAGATGATGAACA+AGG | 0.648716 | 3_1:-3643263 | Msa0344810:intron |
| GATCACCATTATGCTCGAGA+AGG | 0.651392 | 3_1:-3639388 | Msa0344810:CDS |
| CCATTGCCAGTGGATTAAGA+AGG | 0.651578 | 3_1:+3636528 | None:intergenic |
| AGCAACATACCAGCTTTCGT+GGG | 0.652324 | 3_1:+3636305 | None:intergenic |
| TTGATAGGAATCTCTCCAGA+GGG | 0.654111 | 3_1:+3636456 | None:intergenic |
| GGAAACTGGATTCCTCAGCA+AGG | 0.658523 | 3_1:+3639430 | None:intergenic |
| ATGGTTGCAACACTCTGTGG+AGG | 0.660416 | 3_1:-3636509 | Msa0344810:CDS |
| GAATCCTCGAACTTCAAGAG+AGG | 0.660550 | 3_1:+3638716 | None:intergenic |
| GCTTATCTAAAAGACAGTGA+AGG | 0.660660 | 3_1:-3638590 | Msa0344810:CDS |
| ATGGAACATTCTTCTGACGA+AGG | 0.664929 | 3_1:-3640899 | Msa0344810:intron |
| CTTGATAGGAATCTCTCCAG+AGG | 0.667170 | 3_1:+3636455 | None:intergenic |
| AGGCATTGTCAAGAGAGCTG+TGG | 0.669464 | 3_1:-3636564 | Msa0344810:CDS |
| CCTTATCCATAAATATGCTG+CGG | 0.676321 | 3_1:+3638828 | None:intergenic |
| AATGCTGCTGCAAAAGAGCG+CGG | 0.677546 | 3_1:-3638377 | Msa0344810:CDS |
| AGAGTCATATAGTCTTGCTG+AGG | 0.678551 | 3_1:-3636111 | Msa0344810:CDS |
| ACTAGTTGATACAGTAAACA+GGG | 0.681152 | 3_1:-3640024 | Msa0344810:CDS |
| AGATCCAGAGGAATCTCCAG+AGG | 0.681421 | 3_1:-3639050 | Msa0344810:CDS |
| ATCCTGTATAAGGTTGAAGG+AGG | 0.682625 | 3_1:-3638138 | Msa0344810:CDS |
| CATCGGCTCAGCATCTACGC+CGG | 0.687476 | 3_1:+3640919 | None:intergenic |
| GTTGAAGGAGGACATCAATG+AGG | 0.687652 | 3_1:-3638126 | Msa0344810:intron |
| AAGTAGACATGATTGGCTGT+TGG | 0.690356 | 3_1:-3636357 | Msa0344810:CDS |
| TGAAGTTCGAGGATTCTCAG+TGG | 0.695575 | 3_1:-3638709 | Msa0344810:CDS |
| GTTGAAGATGAAGAAGATGG+CGG | 0.703036 | 3_1:-3641302 | Msa0344810:CDS |
| ACTACCAACAGTTGTATTGG+GGG | 0.708035 | 3_1:-3636771 | Msa0344810:CDS |
| CTGATACAGACTTACCTGAG+AGG | 0.716038 | 3_1:-3640272 | Msa0344810:CDS |
| CATAAATCCACTGTTCAGCG+AGG | 0.719797 | 3_1:-3640060 | Msa0344810:CDS |
| TCTGACTCTTCATAGAGACG+AGG | 0.737041 | 3_1:+3636737 | None:intergenic |
| AGTTGATACAGTAAACAGGG+AGG | 0.783722 | 3_1:-3640021 | Msa0344810:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAAATCATTACATTTTTTT+AGG | + | chr3_1:3635965-3635984 | None:intergenic | 10.0% |
| !!! | TAAATATGATAAACAATTTT+CGG | - | chr3_1:3636982-3637001 | Msa0344810:intron | 10.0% |
| !! | AATAATACAGATAATTAATT+TGG | + | chr3_1:3637231-3637250 | None:intergenic | 10.0% |
| !!! | ACATTATTAAATTACTTTTT+TGG | - | chr3_1:3638809-3638828 | Msa0344810:CDS | 10.0% |
| !! | TTTATCAATTAAAAAACAAA+TGG | + | chr3_1:3639641-3639660 | None:intergenic | 10.0% |
| !!! | TTTTTTAATTGATAAATAAC+TGG | - | chr3_1:3639645-3639664 | Msa0344810:intron | 10.0% |
| !! | AATCAATAATACAAATAAAT+AGG | + | chr3_1:3640683-3640702 | None:intergenic | 10.0% |
| !! | CAAATTGTTAAAAAAAAATA+AGG | + | chr3_1:3641464-3641483 | None:intergenic | 10.0% |
| !!! | TTCTGTTTTTTAAAATATTT+AGG | - | chr3_1:3642170-3642189 | Msa0344810:intron | 10.0% |
| !!! | AAATATGATCAAACAATTTT+TGG | - | chr3_1:3635994-3636013 | Msa0344810:CDS | 15.0% |
| !! | ACTTCAATAATCATAAAAAA+GGG | + | chr3_1:3637924-3637943 | None:intergenic | 15.0% |
| !! | TACTTCAATAATCATAAAAA+AGG | + | chr3_1:3637925-3637944 | None:intergenic | 15.0% |
| !!! | AAATTGATTTAAATAATCCA+TGG | - | chr3_1:3638062-3638081 | Msa0344810:intron | 15.0% |
| !!! | AAATTTTATGTTTTTATGGT+TGG | - | chr3_1:3639024-3639043 | Msa0344810:CDS | 15.0% |
| !! | ATGGAATTATGAAAATATTA+AGG | + | chr3_1:3639622-3639641 | None:intergenic | 15.0% |
| !! | TAATTTGATAAACTTATGAA+GGG | + | chr3_1:3639826-3639845 | None:intergenic | 15.0% |
| !!! | TTAATTTGATAAACTTATGA+AGG | + | chr3_1:3639827-3639846 | None:intergenic | 15.0% |
| !!! | TATACTATTCATATTTTCTT+CGG | - | chr3_1:3640895-3640914 | Msa0344810:intron | 15.0% |
| !! | GAAATTATAGTATAAATTAC+AGG | + | chr3_1:3641622-3641641 | None:intergenic | 15.0% |
| !! | TGAAATTAGCTCAAAAAAAA+TGG | + | chr3_1:3635577-3635596 | None:intergenic | 20.0% |
| !!! | GTTTGATTTGTGTTTTTTTT+TGG | - | chr3_1:3635605-3635624 | Msa0344810:CDS | 20.0% |
| !!! | TGATTTATTTTTTGTTGACT+TGG | - | chr3_1:3637374-3637393 | Msa0344810:intron | 20.0% |
| !! | ATTTATCATGTTTCTTCATT+CGG | - | chr3_1:3637772-3637791 | Msa0344810:intron | 20.0% |
| !! | AAAAAAGGGAAACAAAATAA+AGG | + | chr3_1:3637910-3637929 | None:intergenic | 20.0% |
| !!! | ATGATAATCATCAATTTGTT+TGG | - | chr3_1:3637978-3637997 | Msa0344810:intron | 20.0% |
| !!! | CATACTGATATTTTTTATAC+TGG | - | chr3_1:3638237-3638256 | Msa0344810:CDS | 20.0% |
| !! | GAACAAAATCCAATATTAAA+AGG | + | chr3_1:3638305-3638324 | None:intergenic | 20.0% |
| !! | TTAATTTCTACAGATAATTG+AGG | - | chr3_1:3638592-3638611 | Msa0344810:CDS | 20.0% |
| !! | AAGAAACATTAGAAAACTAA+AGG | + | chr3_1:3638857-3638876 | None:intergenic | 20.0% |
| !! | ATACATAATTCCTTCAAAAA+GGG | + | chr3_1:3639083-3639102 | None:intergenic | 20.0% |
| !! | AATACATAATTCCTTCAAAA+AGG | + | chr3_1:3639084-3639103 | None:intergenic | 20.0% |
| !!! | ATTCTGTTGATTTTATCAAT+TGG | - | chr3_1:3639800-3639819 | Msa0344810:CDS | 20.0% |
| !!! | ATACTATTCATATTTTCTTC+GGG | - | chr3_1:3640896-3640915 | Msa0344810:intron | 20.0% |
| !! | ATCACATTATACAAATAATG+AGG | + | chr3_1:3640968-3640987 | None:intergenic | 20.0% |
| !! | TGTAAAATCTCAATACAATA+TGG | + | chr3_1:3641540-3641559 | None:intergenic | 20.0% |
| !! | TTTACATTAGTATGAAAATG+TGG | - | chr3_1:3641554-3641573 | Msa0344810:intron | 20.0% |
| !!! | TCCTTTATAATATCATTTTC+AGG | - | chr3_1:3641681-3641700 | Msa0344810:intron | 20.0% |
| !! | TCCTGAAAATGATATTATAA+AGG | + | chr3_1:3641685-3641704 | None:intergenic | 20.0% |
| !!! | TCTCTTTTTGGATAATTATA+TGG | - | chr3_1:3642144-3642163 | Msa0344810:intron | 20.0% |
| !! | ATATAAATGAATATGCAGAT+GGG | - | chr3_1:3642771-3642790 | Msa0344810:intron | 20.0% |
| !! | ATATTTCCTTGACAATAATA+GGG | + | chr3_1:3643217-3643236 | None:intergenic | 20.0% |
| ! | TTGAGCTAATTTCATTTCTA+CGG | - | chr3_1:3635583-3635602 | Msa0344810:CDS | 25.0% |
| ! | TCGAATATGATAACAAACTT+TGG | - | chr3_1:3637075-3637094 | Msa0344810:intron | 25.0% |
| ! | TATCTGTATTATTAGAGTGA+TGG | - | chr3_1:3637238-3637257 | Msa0344810:intron | 25.0% |
| ! | ATCTGTATTATTAGAGTGAT+GGG | - | chr3_1:3637239-3637258 | Msa0344810:intron | 25.0% |
| ! | ATGAAAACTGAAGATAAGTT+AGG | + | chr3_1:3638014-3638033 | None:intergenic | 25.0% |
| !! | TTAAATAATCCATGGTTTTC+AGG | - | chr3_1:3638070-3638089 | Msa0344810:intron | 25.0% |
| !! | AGTCAGTATCCTTTTAATAT+TGG | - | chr3_1:3638293-3638312 | Msa0344810:CDS | 25.0% |
| ! | AAGTGAATGAAAGAACTTAT+AGG | - | chr3_1:3639141-3639160 | Msa0344810:intron | 25.0% |
| ! | AAAATACGAACATGATGAAA+TGG | - | chr3_1:3639171-3639190 | Msa0344810:intron | 25.0% |
| ! | AAATACGAACATGATGAAAT+GGG | - | chr3_1:3639172-3639191 | Msa0344810:intron | 25.0% |
| ! | TCAAGGAATTGGATATAAAA+TGG | - | chr3_1:3639224-3639243 | Msa0344810:CDS | 25.0% |
| !!! | ACACTGTAGTTTTATTTTTC+AGG | - | chr3_1:3639860-3639879 | Msa0344810:CDS | 25.0% |
| ! | TAAACCTTTGTGAAATTTAG+TGG | - | chr3_1:3640996-3641015 | Msa0344810:intron | 25.0% |
| ! | TGCTGTATCTTAATTATCTT+TGG | - | chr3_1:3641735-3641754 | Msa0344810:intron | 25.0% |
| ! | TGCTGTATCTTAATTATCTT+TGG | - | chr3_1:3641735-3641754 | Msa0344810:intron | 25.0% |
| !!! | CTTTATTTTGTTAGTTGACA+CGG | - | chr3_1:3641868-3641887 | Msa0344810:intron | 25.0% |
| ! | AATTGATTACCATATTGTCT+GGG | + | chr3_1:3642062-3642081 | None:intergenic | 25.0% |
| ! | AAAAGAGACTCTTAAATGTT+AGG | + | chr3_1:3642132-3642151 | None:intergenic | 25.0% |
| !! | AACATTTAAGAGTCTCTTTT+TGG | - | chr3_1:3642132-3642151 | Msa0344810:intron | 25.0% |
| !! | CTTTTTGGATAATTATATGG+TGG | - | chr3_1:3642147-3642166 | Msa0344810:intron | 25.0% |
| ! | ATAGATATTACAAACCAAGT+AGG | - | chr3_1:3642356-3642375 | Msa0344810:intron | 25.0% |
| ! | AATTTATGTCTATACCTACT+TGG | + | chr3_1:3642373-3642392 | None:intergenic | 25.0% |
| ! | AGTAGGTATAGACATAAATT+TGG | - | chr3_1:3642373-3642392 | Msa0344810:intron | 25.0% |
| ! | GTAGGTATAGACATAAATTT+GGG | - | chr3_1:3642374-3642393 | Msa0344810:intron | 25.0% |
| ! | GATATAAATGAATATGCAGA+TGG | - | chr3_1:3642770-3642789 | Msa0344810:intron | 25.0% |
| !!! | AGGATTTTTCAGATGATATT+GGG | - | chr3_1:3643044-3643063 | Msa0344810:intron | 25.0% |
| ! | GATATTTCCTTGACAATAAT+AGG | + | chr3_1:3643218-3643237 | None:intergenic | 25.0% |
| !! | ATTCAATCAGCTTTATTCAC+TGG | - | chr3_1:3636595-3636614 | Msa0344810:intron | 30.0% |
| GCTGATCGAATATAATTTCA+TGG | + | chr3_1:3636805-3636824 | None:intergenic | 30.0% | |
| ! | GAGTAGTATGTGTGATTTTT+AGG | - | chr3_1:3637305-3637324 | Msa0344810:intron | 30.0% |
| !! | TAGTATGTGTGATTTTTAGG+TGG | - | chr3_1:3637308-3637327 | Msa0344810:intron | 30.0% |
| AATGTTGAAGATGAAGAAGA+TGG | - | chr3_1:3637449-3637468 | Msa0344810:intron | 30.0% | |
| ! | TTCTTCTTTTGTGCTTTCAT+AGG | + | chr3_1:3637491-3637510 | None:intergenic | 30.0% |
| TGTCAACTTGATGCATTAAA+GGG | + | chr3_1:3637540-3637559 | None:intergenic | 30.0% | |
| ATGTCAACTTGATGCATTAA+AGG | + | chr3_1:3637541-3637560 | None:intergenic | 30.0% | |
| !! | TGTTTTTATCACCCATTTTC+AGG | - | chr3_1:3637592-3637611 | Msa0344810:intron | 30.0% |
| ! | AGCTTTTGCTTCTTTATAAC+TGG | - | chr3_1:3637699-3637718 | Msa0344810:intron | 30.0% |
| CTTCTTTATAACTGGTACTT+CGG | - | chr3_1:3637707-3637726 | Msa0344810:intron | 30.0% | |
| ATAACAAAAAGCAATCACTC+TGG | + | chr3_1:3637751-3637770 | None:intergenic | 30.0% | |
| TTGAAAAGGCTTAAAAAGTC+CGG | - | chr3_1:3637816-3637835 | Msa0344810:intron | 30.0% | |
| CAATTTACAAACAATAGCAC+AGG | + | chr3_1:3638048-3638067 | None:intergenic | 30.0% | |
| ! | TGATATGTCAGATTTTATCG+TGG | - | chr3_1:3638129-3638148 | Msa0344810:CDS | 30.0% |
| TCTAATGTCATAACTTTGAC+TGG | - | chr3_1:3638268-3638287 | Msa0344810:CDS | 30.0% | |
| CATTCATCTTTGCTTTCAAA+AGG | - | chr3_1:3638361-3638380 | Msa0344810:CDS | 30.0% | |
| ! | ACTAGTTGATACAGTAAACA+GGG | - | chr3_1:3638730-3638749 | Msa0344810:CDS | 30.0% |
| ! | TGATTCGGAAAATACATCAA+TGG | - | chr3_1:3638955-3638974 | Msa0344810:intron | 30.0% |
| GAAAATACATCAATGGATGA+TGG | - | chr3_1:3638962-3638981 | Msa0344810:intron | 30.0% | |
| ! | GTTTTTATGGTTGGATGTTA+TGG | - | chr3_1:3639033-3639052 | Msa0344810:CDS | 30.0% |
| !! | AATGCTTGTTGTAGTATCTT+TGG | + | chr3_1:3639279-3639298 | None:intergenic | 30.0% |
| ! | ATACTACAACAAGCATTTTG+AGG | - | chr3_1:3639282-3639301 | Msa0344810:CDS | 30.0% |
| AAAAATCTGCTTATGGAAAC+TGG | + | chr3_1:3639341-3639360 | None:intergenic | 30.0% | |
| TCTTAAGCAGTGGTTATAAA+AGG | - | chr3_1:3639458-3639477 | Msa0344810:CDS | 30.0% | |
| TCTGATGAAGACATACTATT+CGG | - | chr3_1:3639483-3639502 | Msa0344810:CDS | 30.0% | |
| ATACTATTCGGATTGTAGAA+AGG | - | chr3_1:3639495-3639514 | Msa0344810:CDS | 30.0% | |
| AACTAGAGAACCAAATTTCT+CGG | + | chr3_1:3639557-3639576 | None:intergenic | 30.0% | |
| TAAATAACTGGAGAGTTTCT+TGG | - | chr3_1:3639657-3639676 | Msa0344810:intron | 30.0% | |
| ! | ACTTTAGAAGCTGTACTTAA+AGG | - | chr3_1:3639762-3639781 | Msa0344810:CDS | 30.0% |
| CTGTATTTCCTTTCAATGTA+GGG | + | chr3_1:3639968-3639987 | None:intergenic | 30.0% | |
| AAATCCAGCAAATTCATGAA+AGG | + | chr3_1:3640000-3640019 | None:intergenic | 30.0% | |
| !! | ATGAATTTGCTGGATTTAAG+TGG | - | chr3_1:3640003-3640022 | Msa0344810:CDS | 30.0% |
| TAAATGCTAAGGCTAAAAAC+TGG | - | chr3_1:3640288-3640307 | Msa0344810:CDS | 30.0% | |
| AACTGGTCACTAATGAAATA+TGG | - | chr3_1:3640305-3640324 | Msa0344810:CDS | 30.0% | |
| ACTGGTCACTAATGAAATAT+GGG | - | chr3_1:3640306-3640325 | Msa0344810:CDS | 30.0% | |
| ! | TGAAATATGGGATGCAATTT+TGG | - | chr3_1:3640318-3640337 | Msa0344810:CDS | 30.0% |
| CATAAAATGTCATCACTTAC+TGG | + | chr3_1:3640720-3640739 | None:intergenic | 30.0% | |
| ! | CAGTAAGTGATGACATTTTA+TGG | - | chr3_1:3640718-3640737 | Msa0344810:intron | 30.0% |
| TAACCAAAGACAGATAGAAA+GGG | + | chr3_1:3640867-3640886 | None:intergenic | 30.0% | |
| AGTACCACTAAATTTCACAA+AGG | + | chr3_1:3641003-3641022 | None:intergenic | 30.0% | |
| TTGTGAAATTTAGTGGTACT+AGG | - | chr3_1:3641003-3641022 | Msa0344810:intron | 30.0% | |
| TGTGAAATTTAGTGGTACTA+GGG | - | chr3_1:3641004-3641023 | Msa0344810:intron | 30.0% | |
| GGTTATACATAGTAGTTTAG+TGG | - | chr3_1:3641025-3641044 | Msa0344810:intron | 30.0% | |
| ACATAGTAGTTTAGTGGTAT+TGG | - | chr3_1:3641031-3641050 | Msa0344810:intron | 30.0% | |
| ! | GTTTAGTGGTATTGGATTAT+AGG | - | chr3_1:3641039-3641058 | Msa0344810:intron | 30.0% |
| ACTACTTTAAACCCTAACAA+CGG | + | chr3_1:3641239-3641258 | None:intergenic | 30.0% | |
| ! | TAGGGTTTAAAGTAGTAGTT+TGG | - | chr3_1:3641243-3641262 | Msa0344810:intron | 30.0% |
| CCATATATTCCGATTTCTTT+GGG | - | chr3_1:3641329-3641348 | Msa0344810:CDS | 30.0% | |
| ATTAGTATGAAAATGTGGCT+TGG | - | chr3_1:3641559-3641578 | Msa0344810:intron | 30.0% | |
| AGAACATTAATAACCTCTGA+AGG | + | chr3_1:3641662-3641681 | None:intergenic | 30.0% | |
| CGTGTCAACTAACAAAATAA+AGG | + | chr3_1:3641870-3641889 | None:intergenic | 30.0% | |
| CAATTGATTACCATATTGTC+TGG | + | chr3_1:3642063-3642082 | None:intergenic | 30.0% | |
| GACTCTTAAATGTTAGGAAA+AGG | + | chr3_1:3642126-3642145 | None:intergenic | 30.0% | |
| TATAGATGTGAGAAATCGAA+AGG | - | chr3_1:3642490-3642509 | Msa0344810:intron | 30.0% | |
| AAGTTGGACTGAAAACAAAA+AGG | - | chr3_1:3642522-3642541 | Msa0344810:intron | 30.0% | |
| AGTTGGACTGAAAACAAAAA+GGG | - | chr3_1:3642523-3642542 | Msa0344810:intron | 30.0% | |
| !! | GAGGATTTTTCAGATGATAT+TGG | - | chr3_1:3643043-3643062 | Msa0344810:intron | 30.0% |
| !! | GGATTTTTCAGATGATATTG+GGG | - | chr3_1:3643045-3643064 | Msa0344810:intron | 30.0% |
| ACAAGAGTCAACAGATAAAA+AGG | - | chr3_1:3643252-3643271 | Msa0344810:intron | 30.0% | |
| ! | TGAGGATGAGAAATTTTTCT+AGG | + | chr3_1:3643301-3643320 | None:intergenic | 30.0% |
| ! | GCAGTTATATTCTGAAAATG+AGG | + | chr3_1:3643319-3643338 | None:intergenic | 30.0% |
| AACTCTTGAAGAAAGGGTTT+CGG | + | chr3_1:3635423-3635442 | None:intergenic | 35.0% | |
| AAACCCTTTCTTCAAGAGTT+AGG | - | chr3_1:3635423-3635442 | Msa0344810:CDS | 35.0% | |
| AACCCTTTCTTCAAGAGTTA+GGG | - | chr3_1:3635424-3635443 | Msa0344810:CDS | 35.0% | |
| AACCCTAACTCTTGAAGAAA+GGG | + | chr3_1:3635429-3635448 | None:intergenic | 35.0% | |
| AAACCCTAACTCTTGAAGAA+AGG | + | chr3_1:3635430-3635449 | None:intergenic | 35.0% | |
| ! | TTTTCCATTTCGAGCAACAA+TGG | - | chr3_1:3635448-3635467 | Msa0344810:CDS | 35.0% |
| TGAACCTTGTTCATCATCTT+CGG | + | chr3_1:3635498-3635517 | None:intergenic | 35.0% | |
| GCTTGACAACAACTAACAAA+AGG | + | chr3_1:3637182-3637201 | None:intergenic | 35.0% | |
| ! | TGTAGTATTGAGGATGTTAC+TGG | - | chr3_1:3637339-3637358 | Msa0344810:intron | 35.0% |
| TTTGACGATCTCCTGAAAAT+GGG | + | chr3_1:3637606-3637625 | None:intergenic | 35.0% | |
| ! | TTTTGACGATCTCCTGAAAA+TGG | + | chr3_1:3637607-3637626 | None:intergenic | 35.0% |
| ! | ATTCGGTTTTTGTAGAGTGA+TGG | - | chr3_1:3637789-3637808 | Msa0344810:intron | 35.0% |
| ! | AGAGTGATGGAAAGTTGAAA+AGG | - | chr3_1:3637802-3637821 | Msa0344810:intron | 35.0% |
| ATCATATGATACCTGCTTGT+TGG | - | chr3_1:3637944-3637963 | Msa0344810:intron | 35.0% | |
| CAATAGCACAGGAAAATAAC+TGG | + | chr3_1:3638037-3638056 | None:intergenic | 35.0% | |
| AAAAGAGATCCTGAAAACCA+TGG | + | chr3_1:3638082-3638101 | None:intergenic | 35.0% | |
| AGTAACAACATGAATGCTTG+TGG | - | chr3_1:3638210-3638229 | Msa0344810:CDS | 35.0% | |
| ! | TAACTTGCCAGATCTTTGTT+TGG | + | chr3_1:3638389-3638408 | None:intergenic | 35.0% |
| AAACAAAGATCTGGCAAGTT+AGG | - | chr3_1:3638388-3638407 | Msa0344810:CDS | 35.0% | |
| GTATCGAAGAAGAAAGTTCT+TGG | - | chr3_1:3638648-3638667 | Msa0344810:CDS | 35.0% | |
| ! | GACTAGTTGATACAGTAAAC+AGG | - | chr3_1:3638729-3638748 | Msa0344810:CDS | 35.0% |
| TAAACAGGGAGGATATTGTT+AGG | - | chr3_1:3638744-3638763 | Msa0344810:CDS | 35.0% | |
| TTACGGTACATTGCAACAAA+CGG | + | chr3_1:3638896-3638915 | None:intergenic | 35.0% | |
| AGATGGTAAACAGGATGATT+CGG | - | chr3_1:3638940-3638959 | Msa0344810:intron | 35.0% | |
| ! | AGTCAACATTCCCTTTTTGA+AGG | - | chr3_1:3639070-3639089 | Msa0344810:CDS | 35.0% |
| !! | ATGATGAAATGGGTTCGTTT+TGG | - | chr3_1:3639182-3639201 | Msa0344810:intron | 35.0% |
| !! | TGATGAAATGGGTTCGTTTT+GGG | - | chr3_1:3639183-3639202 | Msa0344810:intron | 35.0% |
| GTAGATACTCTGGATAATCA+AGG | - | chr3_1:3639207-3639226 | Msa0344810:CDS | 35.0% | |
| ACTCTGGATAATCAAGGAAT+TGG | - | chr3_1:3639213-3639232 | Msa0344810:CDS | 35.0% | |
| TCGAGTCAAAAATCTGCTTA+TGG | + | chr3_1:3639348-3639367 | None:intergenic | 35.0% | |
| GAATAGTATGTCTTCATCAG+AGG | + | chr3_1:3639484-3639503 | None:intergenic | 35.0% | |
| ! | TCTTCACTTGCTAGGAAAAT+TGG | - | chr3_1:3639526-3639545 | Msa0344810:CDS | 35.0% |
| ATTGGAAATCCCGAGAAATT+TGG | - | chr3_1:3639544-3639563 | Msa0344810:CDS | 35.0% | |
| ACTAGAGAACCAAATTTCTC+GGG | + | chr3_1:3639556-3639575 | None:intergenic | 35.0% | |
| TCTAGTTACTCTTAACGAAG+CGG | - | chr3_1:3639570-3639589 | Msa0344810:intron | 35.0% | |
| ! | CTTAACGAAGCGGTAAATTT+TGG | - | chr3_1:3639580-3639599 | Msa0344810:intron | 35.0% |
| CCTTATCCATAAATATGCTG+CGG | + | chr3_1:3639929-3639948 | None:intergenic | 35.0% | |
| GCTGTATTTCCTTTCAATGT+AGG | + | chr3_1:3639969-3639988 | None:intergenic | 35.0% | |
| GATTCCTTTCATGAATTTGC+TGG | - | chr3_1:3639993-3640012 | Msa0344810:CDS | 35.0% | |
| GCTTATCTAAAAGACAGTGA+AGG | - | chr3_1:3640164-3640183 | Msa0344810:intron | 35.0% | |
| AGGCAAAAGAAGGTTTGAAA+TGG | + | chr3_1:3640240-3640259 | None:intergenic | 35.0% | |
| ! | AAACCTTCTTTTGCCTTCTA+TGG | - | chr3_1:3640244-3640263 | Msa0344810:intron | 35.0% |
| ACGTGCATTGTTAAATGCTA+AGG | - | chr3_1:3640277-3640296 | Msa0344810:CDS | 35.0% | |
| !!! | ATTTTGGAATAGAGTCTCTG+TGG | - | chr3_1:3640334-3640353 | Msa0344810:CDS | 35.0% |
| !!! | GCATTGTCGTTGTTTTGATA+CGG | + | chr3_1:3640362-3640381 | None:intergenic | 35.0% |
| AACATCACAAATGTTGTACC+TGG | + | chr3_1:3640434-3640453 | None:intergenic | 35.0% | |
| AGGTACAACATTTGTGATGT+TGG | - | chr3_1:3640433-3640452 | Msa0344810:intron | 35.0% | |
| TTTGTGATGTTGGATTCGAA+AGG | - | chr3_1:3640443-3640462 | Msa0344810:intron | 35.0% | |
| GATGAATTGATAGGAACTTG+AGG | + | chr3_1:3640562-3640581 | None:intergenic | 35.0% | |
| CGACCAAAGGTTATTGTATT+AGG | - | chr3_1:3640581-3640600 | Msa0344810:intron | 35.0% | |
| GCTCCTAATACAATAACCTT+TGG | + | chr3_1:3640587-3640606 | None:intergenic | 35.0% | |
| GAACCTAAATGTACTCTTGT+AGG | - | chr3_1:3640781-3640800 | Msa0344810:intron | 35.0% | |
| CGCATTGTAATGTCTCATTT+GGG | + | chr3_1:3640808-3640827 | None:intergenic | 35.0% | |
| ACGCATTGTAATGTCTCATT+TGG | + | chr3_1:3640809-3640828 | None:intergenic | 35.0% | |
| TTTCCCTTTCTATCTGTCTT+TGG | - | chr3_1:3640861-3640880 | Msa0344810:intron | 35.0% | |
| CTAACCAAAGACAGATAGAA+AGG | + | chr3_1:3640868-3640887 | None:intergenic | 35.0% | |
| CTTTCTATCTGTCTTTGGTT+AGG | - | chr3_1:3640866-3640885 | Msa0344810:intron | 35.0% | |
| CTAAATTAGCCCACCAAAAT+TGG | - | chr3_1:3641106-3641125 | Msa0344810:CDS | 35.0% | |
| TTATAAGTAGAGCCGTTGTT+AGG | - | chr3_1:3641224-3641243 | Msa0344810:intron | 35.0% | |
| TATAAGTAGAGCCGTTGTTA+GGG | - | chr3_1:3641225-3641244 | Msa0344810:intron | 35.0% | |
| ! | GGTTTAAAGTAGTAGTTTGG+TGG | - | chr3_1:3641246-3641265 | Msa0344810:intron | 35.0% |
| GTGGGATAGAAGTAGTAATT+TGG | - | chr3_1:3641272-3641291 | Msa0344810:CDS | 35.0% | |
| GGATAGAAGTAGTAATTTGG+TGG | - | chr3_1:3641275-3641294 | Msa0344810:CDS | 35.0% | |
| ! | AATTTGGTGGTATCAGAGTT+AGG | - | chr3_1:3641288-3641307 | Msa0344810:CDS | 35.0% |
| GCCATATATTCCGATTTCTT+TGG | - | chr3_1:3641328-3641347 | Msa0344810:CDS | 35.0% | |
| CCCAAAGAAATCGGAATATA+TGG | + | chr3_1:3641332-3641351 | None:intergenic | 35.0% | |
| ! | TACTGGTTATTGATCTAGTG+TGG | - | chr3_1:3641397-3641416 | Msa0344810:intron | 35.0% |
| ACTGGTTATTGATCTAGTGT+GGG | - | chr3_1:3641398-3641417 | Msa0344810:intron | 35.0% | |
| ACAGGAACTGCAATTCATTA+AGG | + | chr3_1:3641604-3641623 | None:intergenic | 35.0% | |
| GTTGTATTATGCACACGAAT+TGG | - | chr3_1:3641842-3641861 | Msa0344810:intron | 35.0% | |
| TCAGATTATTTCCGTGATGT+CGG | - | chr3_1:3641923-3641942 | Msa0344810:intron | 35.0% | |
| AGGATGATAGAAAGTGGAAA+TGG | + | chr3_1:3642106-3642125 | None:intergenic | 35.0% | |
| AGGAAAAGGATGATAGAAAG+TGG | + | chr3_1:3642112-3642131 | None:intergenic | 35.0% | |
| ATTTGGGAAGTAGACATGAT+TGG | - | chr3_1:3642390-3642409 | Msa0344810:intron | 35.0% | |
| ATGTTGCTCAGAGAATTACT+TGG | - | chr3_1:3642464-3642483 | Msa0344810:intron | 35.0% | |
| CAGCAGTATCAGCAAAATTT+GGG | + | chr3_1:3642592-3642611 | None:intergenic | 35.0% | |
| ACTCTGGATGAATTCTTGTA+CGG | + | chr3_1:3642628-3642647 | None:intergenic | 35.0% | |
| TGCATTCAATTGCGTATCAT+TGG | + | chr3_1:3642708-3642727 | None:intergenic | 35.0% | |
| TCAAAATGATCCAAAACTGC+TGG | - | chr3_1:3642739-3642758 | Msa0344810:intron | 35.0% | |
| AGAAACAGGTGAATGCAAAA+AGG | - | chr3_1:3642802-3642821 | Msa0344810:intron | 35.0% | |
| TCAAGATGACGAGTTCTATA+TGG | - | chr3_1:3642898-3642917 | Msa0344810:intron | 35.0% | |
| TCTATATGGTAACTGGAGAA+AGG | - | chr3_1:3642912-3642931 | Msa0344810:intron | 35.0% | |
| CTATATGGTAACTGGAGAAA+GGG | - | chr3_1:3642913-3642932 | Msa0344810:intron | 35.0% | |
| TATATGGTAACTGGAGAAAG+GGG | - | chr3_1:3642914-3642933 | Msa0344810:intron | 35.0% | |
| !! | ATCTGGAGTACTGTTTAAAG+AGG | - | chr3_1:3643024-3643043 | Msa0344810:intron | 35.0% |
| AATTGATAAGAGTAGATGCC+AGG | - | chr3_1:3643126-3643145 | Msa0344810:intron | 35.0% | |
| CTTTAGATGTCAGATTAACC+TGG | + | chr3_1:3643147-3643166 | None:intergenic | 35.0% | |
| ATGGATCCCTATTATTGTCA+AGG | - | chr3_1:3643208-3643227 | Msa0344810:intron | 35.0% | |
| GGGTTTCGGAGAAATGAAAT+TGG | + | chr3_1:3635409-3635428 | None:intergenic | 40.0% | |
| GAACCTTGTTCATCATCTTC+GGG | + | chr3_1:3635497-3635516 | None:intergenic | 40.0% | |
| !!! | GCTTTTCAGAGAGTATTCGA+AGG | - | chr3_1:3635627-3635646 | Msa0344810:CDS | 40.0% |
| !! | TCAGAGAGTATTCGAAGGAA+AGG | - | chr3_1:3635632-3635651 | Msa0344810:CDS | 40.0% |
| !! | CAGAGAGTATTCGAAGGAAA+GGG | - | chr3_1:3635633-3635652 | Msa0344810:CDS | 40.0% |
| GCTAATCGAGTCAAAGTTCA+TGG | + | chr3_1:3635699-3635718 | None:intergenic | 40.0% | |
| GCTAATCGAGTCTAAGTTCA+TGG | + | chr3_1:3636371-3636390 | None:intergenic | 40.0% | |
| AGCTGATTGAATCTAAGCTC+TGG | + | chr3_1:3636587-3636606 | None:intergenic | 40.0% | |
| GGTGTAAGACTGTAGTATTG+AGG | - | chr3_1:3637329-3637348 | Msa0344810:intron | 40.0% | |
| TGAAGACTTGGATGAGTTTG+AGG | - | chr3_1:3637406-3637425 | Msa0344810:intron | 40.0% | |
| ! | TTGGATGAGTTTGAGGTTGA+TGG | - | chr3_1:3637413-3637432 | Msa0344810:intron | 40.0% |
| ! | TGGATGAGTTTGAGGTTGAT+GGG | - | chr3_1:3637414-3637433 | Msa0344810:intron | 40.0% |
| GTTGAAGATGAAGAAGATGG+CGG | - | chr3_1:3637452-3637471 | Msa0344810:intron | 40.0% | |
| AACTTGATGCATTAAAGGGC+AGG | + | chr3_1:3637536-3637555 | None:intergenic | 40.0% | |
| GCGCTTGAATCAAGGAAAAA+TGG | - | chr3_1:3637674-3637693 | Msa0344810:intron | 40.0% | |
| TCGTCAGAAGAATGTTCCAT+CGG | + | chr3_1:3637855-3637874 | None:intergenic | 40.0% | |
| ATGGAACATTCTTCTGACGA+AGG | - | chr3_1:3637855-3637874 | Msa0344810:intron | 40.0% | |
| AAAGGAGCCAAACAAAGATC+TGG | - | chr3_1:3638379-3638398 | Msa0344810:CDS | 40.0% | |
| ! | CCAGCTACGTGCATATTTTT+AGG | + | chr3_1:3638445-3638464 | None:intergenic | 40.0% |
| CCTAAAAATATGCACGTAGC+TGG | - | chr3_1:3638442-3638461 | Msa0344810:CDS | 40.0% | |
| CAGATAATTGAGGACACTGT+AGG | - | chr3_1:3638602-3638621 | Msa0344810:CDS | 40.0% | |
| TCGATACTCATTCTGTCAAC+CGG | + | chr3_1:3638635-3638654 | None:intergenic | 40.0% | |
| ! | GCTGAACAGTGGATTTATGT+TGG | + | chr3_1:3638693-3638712 | None:intergenic | 40.0% |
| ATCAACTAGTCCACAGGATT+TGG | + | chr3_1:3638720-3638739 | None:intergenic | 40.0% | |
| TACTGTATCAACTAGTCCAC+AGG | + | chr3_1:3638726-3638745 | None:intergenic | 40.0% | |
| ! | AGTTGATACAGTAAACAGGG+AGG | - | chr3_1:3638733-3638752 | Msa0344810:CDS | 40.0% |
| GGAGGATATTGTTAGGTTCT+TGG | - | chr3_1:3638751-3638770 | Msa0344810:CDS | 40.0% | |
| ! | GTTTGTTGCAATGTACCGTA+AGG | - | chr3_1:3638895-3638914 | Msa0344810:intron | 40.0% |
| TACCATCTCTCAGAAGAGTA+GGG | + | chr3_1:3638928-3638947 | None:intergenic | 40.0% | |
| TTACCATCTCTCAGAAGAGT+AGG | + | chr3_1:3638929-3638948 | None:intergenic | 40.0% | |
| ! | TCTTCTGAGAGATGGTAAAC+AGG | - | chr3_1:3638931-3638950 | Msa0344810:intron | 40.0% |
| ! | TACATCAATGGATGATGGTG+AGG | - | chr3_1:3638967-3638986 | Msa0344810:intron | 40.0% |
| ! | ACATCAATGGATGATGGTGA+GGG | - | chr3_1:3638968-3638987 | Msa0344810:intron | 40.0% |
| AATGGCTACATCTTCAGAAG+CGG | - | chr3_1:3639242-3639261 | Msa0344810:CDS | 40.0% | |
| CTTAAGAATTCATCAGCTGG+TGG | + | chr3_1:3639445-3639464 | None:intergenic | 40.0% | |
| CTGCTTAAGAATTCATCAGC+TGG | + | chr3_1:3639448-3639467 | None:intergenic | 40.0% | |
| GCTGATGAATTCTTAAGCAG+TGG | - | chr3_1:3639448-3639467 | Msa0344810:CDS | 40.0% | |
| TATTCGGATTGTAGAAAGGC+AGG | - | chr3_1:3639499-3639518 | Msa0344810:CDS | 40.0% | |
| TATATTGAAGCCATCTCCTC+TGG | + | chr3_1:3639723-3639742 | None:intergenic | 40.0% | |
| TCAACAGAATACCATGTGTC+TGG | + | chr3_1:3639790-3639809 | None:intergenic | 40.0% | |
| TATCTCGCAGCTTAACATCA+TGG | + | chr3_1:3639889-3639908 | None:intergenic | 40.0% | |
| GTATGTCCGCAGCATATTTA+TGG | - | chr3_1:3639920-3639939 | Msa0344810:intron | 40.0% | |
| CCGCAGCATATTTATGGATA+AGG | - | chr3_1:3639926-3639945 | Msa0344810:intron | 40.0% | |
| AACTCCTTTACTGCATCTTC+AGG | + | chr3_1:3640125-3640144 | None:intergenic | 40.0% | |
| AAGGAACGTCTACTCAACTT+TGG | - | chr3_1:3640183-3640202 | Msa0344810:intron | 40.0% | |
| TCTCCATAGAAGGCAAAAGA+AGG | + | chr3_1:3640250-3640269 | None:intergenic | 40.0% | |
| ! | TCTTTTGCCTTCTATGGAGA+AGG | - | chr3_1:3640250-3640269 | Msa0344810:intron | 40.0% |
| CCTTTGGTCGATGAATTGAT+AGG | + | chr3_1:3640571-3640590 | None:intergenic | 40.0% | |
| CCTATCAATTCATCGACCAA+AGG | - | chr3_1:3640568-3640587 | Msa0344810:intron | 40.0% | |
| CAACCTTATACAGGATGCAT+TGG | + | chr3_1:3640612-3640631 | None:intergenic | 40.0% | |
| TGCATCCTGTATAAGGTTGA+AGG | - | chr3_1:3640613-3640632 | Msa0344810:CDS | 40.0% | |
| ATCCTGTATAAGGTTGAAGG+AGG | - | chr3_1:3640616-3640635 | Msa0344810:CDS | 40.0% | |
| AATGTCATCACTTACTGGAG+AGG | + | chr3_1:3640715-3640734 | None:intergenic | 40.0% | |
| CTGTATCCTGAACTGATATG+CGG | - | chr3_1:3640758-3640777 | Msa0344810:intron | 40.0% | |
| TGTATCCTGAACTGATATGC+GGG | - | chr3_1:3640759-3640778 | Msa0344810:intron | 40.0% | |
| ! | GGACCTACAAGAGTACATTT+AGG | + | chr3_1:3640787-3640806 | None:intergenic | 40.0% |
| ACAGAGAAAGAAACAGCAAC+AGG | + | chr3_1:3640839-3640858 | None:intergenic | 40.0% | |
| CTATCTGTCTTTGGTTAGGA+TGG | - | chr3_1:3640870-3640889 | Msa0344810:intron | 40.0% | |
| TTTCATGCAGAAGGAAGCAA+GGG | - | chr3_1:3640919-3640938 | Msa0344810:CDS | 40.0% | |
| !! | TTTAGCCTTAGCATTCAGCA+AGG | + | chr3_1:3640945-3640964 | None:intergenic | 40.0% |
| !! | TCCCTAGTTCCAATTTTGGT+GGG | + | chr3_1:3641118-3641137 | None:intergenic | 40.0% |
| ! | GTTCTCCCTAGTTCCAATTT+TGG | + | chr3_1:3641122-3641141 | None:intergenic | 40.0% |
| CCATGCAAACCCAAAGAAAT+CGG | + | chr3_1:3641341-3641360 | None:intergenic | 40.0% | |
| ! | CGATTTCTTTGGGTTTGCAT+GGG | - | chr3_1:3641339-3641358 | Msa0344810:CDS | 40.0% |
| ! | GATTTCTTTGGGTTTGCATG+GGG | - | chr3_1:3641340-3641359 | Msa0344810:CDS | 40.0% |
| ! | TTTTGCAATCATGCCTTCAG+AGG | - | chr3_1:3641646-3641665 | Msa0344810:intron | 40.0% |
| AAAATTGTCCTCCGACATCA+CGG | + | chr3_1:3641937-3641956 | None:intergenic | 40.0% | |
| TAGTCCATTCATCTCTTGAC+TGG | + | chr3_1:3641967-3641986 | None:intergenic | 40.0% | |
| TGGACTACCAACAGTTGTAT+TGG | - | chr3_1:3641980-3641999 | Msa0344810:intron | 40.0% | |
| GGACTACCAACAGTTGTATT+GGG | - | chr3_1:3641981-3642000 | Msa0344810:intron | 40.0% | |
| GACTACCAACAGTTGTATTG+GGG | - | chr3_1:3641982-3642001 | Msa0344810:intron | 40.0% | |
| ACTACCAACAGTTGTATTGG+GGG | - | chr3_1:3641983-3642002 | Msa0344810:intron | 40.0% | |
| TACCATATTGTCTGGGAAAC+TGG | + | chr3_1:3642055-3642074 | None:intergenic | 40.0% | |
| ACGTTACCTTCTTAATCCAC+TGG | - | chr3_1:3642220-3642239 | Msa0344810:intron | 40.0% | |
| !! | GCAATAAAGAGGTACTGTCT+TGG | - | chr3_1:3642267-3642286 | Msa0344810:intron | 40.0% |
| !! | AGAGGTACTGTCTTGGAAAT+TGG | - | chr3_1:3642274-3642293 | Msa0344810:intron | 40.0% |
| TTGATAGGAATCTCTCCAGA+GGG | + | chr3_1:3642301-3642320 | None:intergenic | 40.0% | |
| CCATCTTCTCATCACTTGAT+AGG | + | chr3_1:3642316-3642335 | None:intergenic | 40.0% | |
| CCTATCAAGTGATGAGAAGA+TGG | - | chr3_1:3642313-3642332 | Msa0344810:intron | 40.0% | |
| AGAAGATGGAGATGATCGAA+TGG | - | chr3_1:3642327-3642346 | Msa0344810:intron | 40.0% | |
| ! | AAGTAGACATGATTGGCTGT+TGG | - | chr3_1:3642397-3642416 | Msa0344810:intron | 40.0% |
| AGACCAGAAATGAACTGCAA+AGG | + | chr3_1:3642425-3642444 | None:intergenic | 40.0% | |
| !! | TTGCAGTTCATTTCTGGTCT+TGG | - | chr3_1:3642425-3642444 | Msa0344810:intron | 40.0% |
| TTGCTCAGAGAATTACTTGG+AGG | - | chr3_1:3642467-3642486 | Msa0344810:intron | 40.0% | |
| TGTGAGAAATCGAAAGGACT+TGG | - | chr3_1:3642496-3642515 | Msa0344810:intron | 40.0% | |
| !!! | CAACGCTGTTGGTTTTTTAC+AGG | - | chr3_1:3642553-3642572 | Msa0344810:intron | 40.0% |
| CCAGCAGTATCAGCAAAATT+TGG | + | chr3_1:3642593-3642612 | None:intergenic | 40.0% | |
| ! | CCAAATTTTGCTGATACTGC+TGG | - | chr3_1:3642590-3642609 | Msa0344810:intron | 40.0% |
| GATGAATTCTTGTACGGTCA+AGG | + | chr3_1:3642622-3642641 | None:intergenic | 40.0% | |
| TCAGCAAGACTATATGACTC+TGG | + | chr3_1:3642644-3642663 | None:intergenic | 40.0% | |
| ! | AGAGTCATATAGTCTTGCTG+AGG | - | chr3_1:3642643-3642662 | Msa0344810:intron | 40.0% |
| ATTGGCATCAGCATAATGTC+TGG | + | chr3_1:3642690-3642709 | None:intergenic | 40.0% | |
| ! | TCAAAACTCTCCAGCAGTTT+TGG | + | chr3_1:3642752-3642771 | None:intergenic | 40.0% |
| ! | ATGCAAAAAGGCCACTCTTT+TGG | - | chr3_1:3642814-3642833 | Msa0344810:intron | 40.0% |
| CATCCTTATGTCCAAAAGAG+TGG | + | chr3_1:3642828-3642847 | None:intergenic | 40.0% | |
| ! | CACTCTTTTGGACATAAGGA+TGG | - | chr3_1:3642826-3642845 | Msa0344810:intron | 40.0% |
| ATAAGGATGGAACTACTCCA+TGG | - | chr3_1:3642839-3642858 | Msa0344810:intron | 40.0% | |
| TCCATGGATTTAAAGATCCC+AGG | - | chr3_1:3642855-3642874 | Msa0344810:intron | 40.0% | |
| TCCTGGGATCTTTAAATCCA+TGG | + | chr3_1:3642859-3642878 | None:intergenic | 40.0% | |
| !! | CTTGAGTTGGTTCCTGAAAA+GGG | + | chr3_1:3642883-3642902 | None:intergenic | 40.0% |
| !! | TCTTGAGTTGGTTCCTGAAA+AGG | + | chr3_1:3642884-3642903 | None:intergenic | 40.0% |
| TAGAACTCGTCATCTTGAGT+TGG | + | chr3_1:3642896-3642915 | None:intergenic | 40.0% | |
| GACGAGTTCTATATGGTAAC+TGG | - | chr3_1:3642905-3642924 | Msa0344810:intron | 40.0% | |
| ATATGGTAACTGGAGAAAGG+GGG | - | chr3_1:3642915-3642934 | Msa0344810:intron | 40.0% | |
| TATTGGGGATATGCCGTTAA+CGG | - | chr3_1:3643060-3643079 | Msa0344810:intron | 40.0% | |
| ! | TCGCGCAATTTTTCCGTTAA+CGG | + | chr3_1:3643076-3643095 | None:intergenic | 40.0% |
| TTAACGGAAAAATTGCGCGA+AGG | - | chr3_1:3643076-3643095 | Msa0344810:intron | 40.0% | |
| ! | AGGTGTTGTGCTTAAATGCA+AGG | - | chr3_1:3643096-3643115 | Msa0344810:CDS | 40.0% |
| ! | GTGAGTGAGTTTAAGAGTGT+TGG | - | chr3_1:3643166-3643185 | Msa0344810:intron | 40.0% |
| ! | CGATCAAAGTTTTCGTGACA+TGG | - | chr3_1:3643189-3643208 | Msa0344810:intron | 40.0% |
| !! | TCTGTTGACTCTTGTAGACT+TGG | + | chr3_1:3643247-3643266 | None:intergenic | 40.0% |
| AACTGCAGATCAAGCAAAAG+AGG | - | chr3_1:3643333-3643352 | Msa0344810:five_prime_UTR | 40.0% | |
| !! | TGTTCATCATCTTCGGGTTG+AGG | + | chr3_1:3635491-3635510 | None:intergenic | 45.0% |
| CAACCCGAAGATGATGAACA+AGG | - | chr3_1:3635491-3635510 | Msa0344810:CDS | 45.0% | |
| GTATTCGAAGGAAAGGGAAG+AGG | - | chr3_1:3635639-3635658 | Msa0344810:CDS | 45.0% | |
| !! | GCTTCTACTGTTGATGACGA+TGG | - | chr3_1:3635668-3635687 | Msa0344810:CDS | 45.0% |
| CAGTGAAGAGTTCAGTCTGT+AGG | - | chr3_1:3636855-3636874 | Msa0344810:intron | 45.0% | |
| GTTGTTGTCAAGCACATGCA+TGG | - | chr3_1:3637189-3637208 | Msa0344810:intron | 45.0% | |
| TGGTGAAGCAGATGAAGACT+TGG | - | chr3_1:3637394-3637413 | Msa0344810:intron | 45.0% | |
| GATTCAAGCGCTTGTTCTCA+CGG | + | chr3_1:3637665-3637684 | None:intergenic | 45.0% | |
| GAGAACAAGCGCTTGAATCA+AGG | - | chr3_1:3637666-3637685 | Msa0344810:intron | 45.0% | |
| AGGTGACTAGTATCAGCTTG+TGG | - | chr3_1:3637875-3637894 | Msa0344810:intron | 45.0% | |
| GTCAAACTTGTCCAACAAGC+AGG | + | chr3_1:3637958-3637977 | None:intergenic | 45.0% | |
| ACGAAGAGCCTGTTGTCTAT+GGG | - | chr3_1:3638152-3638171 | Msa0344810:CDS | 45.0% | |
| AAATATGCACGTAGCTGGAG+AGG | - | chr3_1:3638447-3638466 | Msa0344810:CDS | 45.0% | |
| AATATGCACGTAGCTGGAGA+GGG | - | chr3_1:3638448-3638467 | Msa0344810:CDS | 45.0% | |
| CTGATACAGACTTACCTGAG+AGG | - | chr3_1:3638482-3638501 | Msa0344810:CDS | 45.0% | |
| ! | GGACACTGTAGGATCTTTTC+CGG | - | chr3_1:3638613-3638632 | Msa0344810:CDS | 45.0% |
| CATAAATCCACTGTTCAGCG+AGG | - | chr3_1:3638694-3638713 | Msa0344810:CDS | 45.0% | |
| AGGGAAACCCTAAACTGAAC+TGG | - | chr3_1:3638987-3639006 | Msa0344810:CDS | 45.0% | |
| CCTTGTGCCAGTTCAGTTTA+GGG | + | chr3_1:3638997-3639016 | None:intergenic | 45.0% | |
| ACCTTGTGCCAGTTCAGTTT+AGG | + | chr3_1:3638998-3639017 | None:intergenic | 45.0% | |
| !! | CGTTTTGGGTGTAGATACTC+TGG | - | chr3_1:3639197-3639216 | Msa0344810:CDS | 45.0% |
| CCTCAGCAAGGAAAGACATT+TGG | + | chr3_1:3639315-3639334 | None:intergenic | 45.0% | |
| CCAAATGTCTTTCCTTGCTG+AGG | - | chr3_1:3639312-3639331 | Msa0344810:CDS | 45.0% | |
| GATCACCATTATGCTCGAGA+AGG | - | chr3_1:3639366-3639385 | Msa0344810:CDS | 45.0% | |
| TTCAGCCTTCTCGAGCATAA+TGG | + | chr3_1:3639374-3639393 | None:intergenic | 45.0% | |
| CAGGATTGTCTTCACTTGCT+AGG | - | chr3_1:3639518-3639537 | Msa0344810:CDS | 45.0% | |
| TGGAGAGTTTCTTGGACACT+AGG | - | chr3_1:3639665-3639684 | Msa0344810:intron | 45.0% | |
| GGAGAGTTTCTTGGACACTA+GGG | - | chr3_1:3639666-3639685 | Msa0344810:intron | 45.0% | |
| GTTTCTTGGACACTAGGGAA+TGG | - | chr3_1:3639671-3639690 | Msa0344810:intron | 45.0% | |
| GGTTAGTGAAGAAGATCCAG+AGG | - | chr3_1:3639692-3639711 | Msa0344810:intron | 45.0% | |
| TAAGCTGCGAGATACCTTTC+AGG | - | chr3_1:3639895-3639914 | Msa0344810:intron | 45.0% | |
| TCAGCTAGCCCTACATTGAA+AGG | - | chr3_1:3639957-3639976 | Msa0344810:intron | 45.0% | |
| TGCTGGATTTAAGTGGCTGA+AGG | - | chr3_1:3640010-3640029 | Msa0344810:CDS | 45.0% | |
| GAATCCTCGAACTTCAAGAG+AGG | + | chr3_1:3640041-3640060 | None:intergenic | 45.0% | |
| TGAAGTTCGAGGATTCTCAG+TGG | - | chr3_1:3640045-3640064 | Msa0344810:CDS | 45.0% | |
| TCAGTGGCTTCTCATTCAGA+AGG | - | chr3_1:3640061-3640080 | Msa0344810:CDS | 45.0% | |
| CATTCAGAAGGCTGAAGAAG+AGG | - | chr3_1:3640073-3640092 | Msa0344810:CDS | 45.0% | |
| GTTGCCTGAAGATGCAGTAA+AGG | - | chr3_1:3640118-3640137 | Msa0344810:CDS | 45.0% | |
| GCAGCGTAAATTAATCCTGC+AGG | - | chr3_1:3640211-3640230 | Msa0344810:intron | 45.0% | |
| ! | GGTTTGAAATGGTATCCTGC+AGG | + | chr3_1:3640229-3640248 | None:intergenic | 45.0% |
| ! | TTGGTTGATGTGATGCATGC+TGG | - | chr3_1:3640470-3640489 | Msa0344810:intron | 45.0% |
| ! | TGGTTGATGTGATGCATGCT+GGG | - | chr3_1:3640471-3640490 | Msa0344810:intron | 45.0% |
| CTGCCAATGCATCCTGTATA+AGG | - | chr3_1:3640606-3640625 | Msa0344810:CDS | 45.0% | |
| GTCCTCCTTCAACCTTATAC+AGG | + | chr3_1:3640621-3640640 | None:intergenic | 45.0% | |
| GTTGAAGGAGGACATCAATG+AGG | - | chr3_1:3640628-3640647 | Msa0344810:CDS | 45.0% | |
| AAGTTGCTCTTGCGTCTTAC+TGG | - | chr3_1:3640652-3640671 | Msa0344810:CDS | 45.0% | |
| ! | TTCTTCGGGTTTCATGCAGA+AGG | - | chr3_1:3640910-3640929 | Msa0344810:CDS | 45.0% |
| GTTTCATGCAGAAGGAAGCA+AGG | - | chr3_1:3640918-3640937 | Msa0344810:CDS | 45.0% | |
| AGCCCACCAAAATTGGAACT+AGG | - | chr3_1:3641113-3641132 | Msa0344810:CDS | 45.0% | |
| GCCCACCAAAATTGGAACTA+GGG | - | chr3_1:3641114-3641133 | Msa0344810:CDS | 45.0% | |
| ! | CTCCCTAGTTCCAATTTTGG+TGG | + | chr3_1:3641119-3641138 | None:intergenic | 45.0% |
| CCAACTCTAATAACCCGCTT+GGG | + | chr3_1:3641201-3641220 | None:intergenic | 45.0% | |
| TCCAACTCTAATAACCCGCT+TGG | + | chr3_1:3641202-3641221 | None:intergenic | 45.0% | |
| ! | AGTAGTAGTTTGGTGGCATG+TGG | - | chr3_1:3641253-3641272 | Msa0344810:intron | 45.0% |
| ! | GTAGTAGTTTGGTGGCATGT+GGG | - | chr3_1:3641254-3641273 | Msa0344810:intron | 45.0% |
| !! | TATCAGAGTTAGGAGTGTCC+CGG | - | chr3_1:3641298-3641317 | Msa0344810:CDS | 45.0% |
| ! | CCGATTTCTTTGGGTTTGCA+TGG | - | chr3_1:3641338-3641357 | Msa0344810:CDS | 45.0% |
| !! | GTATTAGCCTTAGCATCAGC+AGG | + | chr3_1:3641380-3641399 | None:intergenic | 45.0% |
| GCTGATGCTAAGGCTAATAC+TGG | - | chr3_1:3641380-3641399 | Msa0344810:intron | 45.0% | |
| ATCTAGTGTGGGATGCATTG+TGG | - | chr3_1:3641409-3641428 | Msa0344810:intron | 45.0% | |
| !! | AAGGGTATCTCACAGAGCAA+CGG | + | chr3_1:3641445-3641464 | None:intergenic | 45.0% |
| GATTATTTCCGTGATGTCGG+AGG | - | chr3_1:3641926-3641945 | Msa0344810:intron | 45.0% | |
| TCATCCCCCAATACAACTGT+TGG | + | chr3_1:3641990-3642009 | None:intergenic | 45.0% | |
| ACAGTTGTATTGGGGGATGA+AGG | - | chr3_1:3641990-3642009 | Msa0344810:intron | 45.0% | |
| TCTGACTCTTCATAGAGACG+AGG | + | chr3_1:3642020-3642039 | None:intergenic | 45.0% | |
| AGCCAGTTTCCCAGACAATA+TGG | - | chr3_1:3642050-3642069 | Msa0344810:intron | 45.0% | |
| !! | CCATTGCCAGTGGATTAAGA+AGG | + | chr3_1:3642229-3642248 | None:intergenic | 45.0% |
| CCTTCTTAATCCACTGGCAA+TGG | - | chr3_1:3642226-3642245 | Msa0344810:intron | 45.0% | |
| ACTCTGTGGAGGCAATAAAG+AGG | - | chr3_1:3642256-3642275 | Msa0344810:intron | 45.0% | |
| CTTGATAGGAATCTCTCCAG+AGG | + | chr3_1:3642302-3642321 | None:intergenic | 45.0% | |
| GCACCTTTGCAGTTCATTTC+TGG | - | chr3_1:3642419-3642438 | Msa0344810:intron | 45.0% | |
| AGCAACATACCAGCTTTCGT+GGG | + | chr3_1:3642452-3642471 | None:intergenic | 45.0% | |
| CGAAAGGACTTGGCTAAAGT+TGG | - | chr3_1:3642506-3642525 | Msa0344810:intron | 45.0% | |
| ! | GATGGGCTTGAAACAGAAAC+AGG | - | chr3_1:3642788-3642807 | Msa0344810:intron | 45.0% |
| ! | AGGCCACTCTTTTGGACATA+AGG | - | chr3_1:3642822-3642841 | Msa0344810:intron | 45.0% |
| TATGGTAACTGGAGAAAGGG+GGG | - | chr3_1:3642916-3642935 | Msa0344810:intron | 45.0% | |
| GGTTGAAGGAGAAAGAGTTC+AGG | - | chr3_1:3642946-3642965 | Msa0344810:intron | 45.0% | |
| ! | GAGCTTGAGTCTGGAATATC+TGG | - | chr3_1:3643007-3643026 | Msa0344810:intron | 45.0% |
| TTGACTCTTGTAGACTTGGC+AGG | + | chr3_1:3643243-3643262 | None:intergenic | 45.0% | |
| !!! | TTTTAAATTTTATGTTTTTA+TGG | - | chr3_1:3639020-3639039 | Msa0344810:CDS | 5.0% |
| !! | AAATTGTTAAAAAAAAATAA+GGG | + | chr3_1:3641463-3641482 | None:intergenic | 5.0% |
| CTCGCCATTGTTGCTCGAAA+TGG | + | chr3_1:3635455-3635474 | None:intergenic | 50.0% | |
| GACGAAGAGCCTGTTGTCTA+TGG | - | chr3_1:3638151-3638170 | Msa0344810:CDS | 50.0% | |
| AGAGCCTGTTGTCTATGGGA+AGG | - | chr3_1:3638156-3638175 | Msa0344810:CDS | 50.0% | |
| GAGCCTGTTGTCTATGGGAA+GGG | - | chr3_1:3638157-3638176 | Msa0344810:CDS | 50.0% | |
| TCTCCCTTCCCATAGACAAC+AGG | + | chr3_1:3638163-3638182 | None:intergenic | 50.0% | |
| ATGGGAAGGGAGATTCTCTC+AGG | - | chr3_1:3638170-3638189 | Msa0344810:CDS | 50.0% | |
| AGACTTACCTGAGAGGATGC+AGG | - | chr3_1:3638489-3638508 | Msa0344810:CDS | 50.0% | |
| !! | GAGTAGGGCACTGTTCCTTA+CGG | + | chr3_1:3638913-3638932 | None:intergenic | 50.0% |
| ! | TGCCCTACTCTTCTGAGAGA+TGG | - | chr3_1:3638923-3638942 | Msa0344810:intron | 50.0% |
| CCCTAAACTGAACTGGCACA+AGG | - | chr3_1:3638994-3639013 | Msa0344810:CDS | 50.0% | |
| GGAAACTGGATTCCTCAGCA+AGG | + | chr3_1:3639327-3639346 | None:intergenic | 50.0% | |
| AGATCCAGAGGAATCTCCAG+AGG | - | chr3_1:3639704-3639723 | Msa0344810:intron | 50.0% | |
| ! | ATCTCCTCTGGAGATTCCTC+TGG | + | chr3_1:3639711-3639730 | None:intergenic | 50.0% |
| AGAGGAATCTCCAGAGGAGA+TGG | - | chr3_1:3639710-3639729 | Msa0344810:intron | 50.0% | |
| !! | ACTTAAAGGCGCCAGACACA+TGG | - | chr3_1:3639776-3639795 | Msa0344810:CDS | 50.0% |
| CTGCGGACATACTTCCTGAA+AGG | + | chr3_1:3639912-3639931 | None:intergenic | 50.0% | |
| CAAGCCTCTCTTGAAGTTCG+AGG | - | chr3_1:3640034-3640053 | Msa0344810:CDS | 50.0% | |
| CGTGCTTCCTTCTCCATAGA+AGG | + | chr3_1:3640260-3640279 | None:intergenic | 50.0% | |
| !! | CGGAGTAGTGGCTTGTTGTT+GGG | - | chr3_1:3640397-3640416 | Msa0344810:CDS | 50.0% |
| !! | GGAGTAGTGGCTTGTTGTTG+GGG | - | chr3_1:3640398-3640417 | Msa0344810:CDS | 50.0% |
| !! | GTGGCTTGTTGTTGGGGAAA+TGG | - | chr3_1:3640404-3640423 | Msa0344810:CDS | 50.0% |
| TGTTGGGGAAATGGTAAGCC+AGG | - | chr3_1:3640413-3640432 | Msa0344810:CDS | 50.0% | |
| GTTGGATTCGAAAGGCGAGT+TGG | - | chr3_1:3640451-3640470 | Msa0344810:intron | 50.0% | |
| ATGACCAGCAGCGCAGAAAA+AGG | - | chr3_1:3640522-3640541 | Msa0344810:intron | 50.0% | |
| TGACCAGCAGCGCAGAAAAA+GGG | - | chr3_1:3640523-3640542 | Msa0344810:intron | 50.0% | |
| TGCTCTTGCGTCTTACTGGA+TGG | - | chr3_1:3640656-3640675 | Msa0344810:CDS | 50.0% | |
| GCTCTTGCGTCTTACTGGAT+GGG | - | chr3_1:3640657-3640676 | Msa0344810:CDS | 50.0% | |
| TCATCACTTACTGGAGAGGC+GGG | + | chr3_1:3640711-3640730 | None:intergenic | 50.0% | |
| GTCATCACTTACTGGAGAGG+CGG | + | chr3_1:3640712-3640731 | None:intergenic | 50.0% | |
| AGGTTCCCGCATATCAGTTC+AGG | + | chr3_1:3640767-3640786 | None:intergenic | 50.0% | |
| AAGGGCCTTGCTGAATGCTA+AGG | - | chr3_1:3640937-3640956 | Msa0344810:CDS | 50.0% | |
| AGGGAGAACTTGAGACCTTG+AGG | - | chr3_1:3641133-3641152 | Msa0344810:CDS | 50.0% | |
| TTGGAGTGTGCTTCTCCTCA+AGG | + | chr3_1:3641151-3641170 | None:intergenic | 50.0% | |
| CTCTAATAACCCGCTTGGGT+TGG | + | chr3_1:3641197-3641216 | None:intergenic | 50.0% | |
| !! | CCCAAGCGGGTTATTAGAGT+TGG | - | chr3_1:3641198-3641217 | Msa0344810:intron | 50.0% |
| !! | ATCAGAGTTAGGAGTGTCCC+GGG | - | chr3_1:3641299-3641318 | Msa0344810:CDS | 50.0% |
| GAATATATGGCATGCCACCC+GGG | + | chr3_1:3641319-3641338 | None:intergenic | 50.0% | |
| GGAATATATGGCATGCCACC+CGG | + | chr3_1:3641320-3641339 | None:intergenic | 50.0% | |
| CAAGAGTCCTGCTGATGCTA+AGG | - | chr3_1:3641370-3641389 | Msa0344810:intron | 50.0% | |
| ! | AGGGTATCTCACAGAGCAAC+GGG | + | chr3_1:3641444-3641463 | None:intergenic | 50.0% |
| GACGCCAGTCAAGAGATGAA+TGG | - | chr3_1:3641960-3641979 | Msa0344810:intron | 50.0% | |
| ! | AGGCATTGTCAAGAGAGCTG+TGG | - | chr3_1:3642190-3642209 | Msa0344810:intron | 50.0% |
| AGTGTTGCAACCATTGCCAG+TGG | + | chr3_1:3642239-3642258 | None:intergenic | 50.0% | |
| GCAATGGTTGCAACACTCTG+TGG | - | chr3_1:3642242-3642261 | Msa0344810:intron | 50.0% | |
| ATGGTTGCAACACTCTGTGG+AGG | - | chr3_1:3642245-3642264 | Msa0344810:intron | 50.0% | |
| GTCTTGGAAATTGGACCCTC+TGG | - | chr3_1:3642283-3642302 | Msa0344810:intron | 50.0% | |
| GAGCAACATACCAGCTTTCG+TGG | + | chr3_1:3642453-3642472 | None:intergenic | 50.0% | |
| ! | AGGGTTTTCTGCAACGCTGT+TGG | - | chr3_1:3642542-3642561 | Msa0344810:intron | 50.0% |
| GCATTCTGTGAGCTTGAGTC+TGG | - | chr3_1:3642998-3643017 | Msa0344810:intron | 50.0% | |
| ! | CCAGACGCTGTGTGCTCTTT+TGG | + | chr3_1:3638418-3638437 | None:intergenic | 55.0% |
| ! | CCAAAAGAGCACACAGCGTC+TGG | - | chr3_1:3638415-3638434 | Msa0344810:CDS | 55.0% |
| AGCATGACCTGCATCCTCTC+AGG | + | chr3_1:3638499-3638518 | None:intergenic | 55.0% | |
| GATTTGGCCTCGCTGAACAG+TGG | + | chr3_1:3638704-3638723 | None:intergenic | 55.0% | |
| TTCAGCGAGGCCAAATCCTG+TGG | - | chr3_1:3638707-3638726 | Msa0344810:CDS | 55.0% | |
| !! | GCGGAGTAGTGGCTTGTTGT+TGG | - | chr3_1:3640396-3640415 | Msa0344810:CDS | 55.0% |
| ! | GATCCCTTTTTCTGCGCTGC+TGG | + | chr3_1:3640529-3640548 | None:intergenic | 55.0% |
| GGGTATCTCACAGAGCAACG+GGG | + | chr3_1:3641443-3641462 | None:intergenic | 55.0% | |
| GTCAAGAGAGCTGTGGCTCT+TGG | - | chr3_1:3642197-3642216 | Msa0344810:intron | 55.0% | |
| ! | AGATCCCAGGAGCCCTTTTC+AGG | - | chr3_1:3642868-3642887 | Msa0344810:intron | 55.0% |
| GGTTCCTGAAAAGGGCTCCT+GGG | + | chr3_1:3642875-3642894 | None:intergenic | 55.0% | |
| TGGTTCCTGAAAAGGGCTCC+TGG | + | chr3_1:3642876-3642895 | None:intergenic | 55.0% | |
| GGCAACAGTTCGTCGTGTAC+TGG | - | chr3_1:3642967-3642986 | Msa0344810:intron | 55.0% | |
| !! | CATCGGCTCAGCATCTACGC+CGG | + | chr3_1:3637838-3637857 | None:intergenic | 60.0% |
| !! | ATAACCCGCTTGGGTTGGCC+TGG | + | chr3_1:3641192-3641211 | None:intergenic | 60.0% |
| !! | AGAGTTAGGAGTGTCCCGGG+TGG | - | chr3_1:3641302-3641321 | Msa0344810:CDS | 60.0% |
| GGTCTTGGACCCACGAAAGC+TGG | - | chr3_1:3642440-3642459 | Msa0344810:intron | 60.0% | |
| TGGAGAAAGGGGGGTTGCAC+TGG | - | chr3_1:3642925-3642944 | Msa0344810:intron | 60.0% | |
| !! | AGGGGGGTTGCACTGGTTGA+AGG | - | chr3_1:3642932-3642951 | Msa0344810:intron | 60.0% |
| !! | TCGTCGTGTACTGGCTCGTC+AGG | - | chr3_1:3642976-3642995 | Msa0344810:intron | 60.0% |
| CGGCGTAGATGCTGAGCCGA+TGG | - | chr3_1:3637836-3637855 | Msa0344810:intron | 65.0% | |
| !! | GCGGTGTTGGCTTGGGAGCT+TGG | + | chr3_1:3641170-3641189 | None:intergenic | 65.0% |
| !! | TGGCCTGGCGGTGTTGGCTT+GGG | + | chr3_1:3641177-3641196 | None:intergenic | 65.0% |
| !! | TTGGCCTGGCGGTGTTGGCT+TGG | + | chr3_1:3641178-3641197 | None:intergenic | 65.0% |
| !! | TTGGGTTGGCCTGGCGGTGT+TGG | + | chr3_1:3641183-3641202 | None:intergenic | 65.0% |
| GCTCCCAAGCCAACACCGCC+AGG | - | chr3_1:3641171-3641190 | Msa0344810:intron | 70.0% | |
| CACCGCCAGGCCAACCCAAG+CGG | - | chr3_1:3641184-3641203 | Msa0344810:intron | 70.0% | |
| ACCGCCAGGCCAACCCAAGC+GGG | - | chr3_1:3641185-3641204 | Msa0344810:intron | 70.0% | |
| !! | ACCCGCTTGGGTTGGCCTGG+CGG | + | chr3_1:3641189-3641208 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 3635386 | 3643390 | 3635386 | ID=Msa0344810;Name=Msa0344810 |
| chr3_1 | mRNA | 3635386 | 3643390 | 3635386 | ID=Msa0344810-mRNA-1;Parent=Msa0344810;Name=Msa0344810-mRNA-1;_AED=0.21;_eAED=0.27;_QI=81|1|0.92|1|0.92|1|14|0|1189 |
| chr3_1 | exon | 3635386 | 3636584 | 3635386 | ID=Msa0344810-mRNA-1:exon:1147;Parent=Msa0344810-mRNA-1 |
| chr3_1 | exon | 3636705 | 3636849 | 3636705 | ID=Msa0344810-mRNA-1:exon:1146;Parent=Msa0344810-mRNA-1 |
| chr3_1 | exon | 3638127 | 3638894 | 3638127 | ID=Msa0344810-mRNA-1:exon:1145;Parent=Msa0344810-mRNA-1 |
| chr3_1 | exon | 3638979 | 3639089 | 3638979 | ID=Msa0344810-mRNA-1:exon:1144;Parent=Msa0344810-mRNA-1 |
| chr3_1 | exon | 3639185 | 3639565 | 3639185 | ID=Msa0344810-mRNA-1:exon:1143;Parent=Msa0344810-mRNA-1 |
| chr3_1 | exon | 3639761 | 3639886 | 3639761 | ID=Msa0344810-mRNA-1:exon:1142;Parent=Msa0344810-mRNA-1 |
| chr3_1 | exon | 3639977 | 3640171 | 3639977 | ID=Msa0344810-mRNA-1:exon:1141;Parent=Msa0344810-mRNA-1 |
| chr3_1 | exon | 3640266 | 3640440 | 3640266 | ID=Msa0344810-mRNA-1:exon:1140;Parent=Msa0344810-mRNA-1 |
| chr3_1 | exon | 3640585 | 3640684 | 3640585 | ID=Msa0344810-mRNA-1:exon:1139;Parent=Msa0344810-mRNA-1 |
| chr3_1 | exon | 3640900 | 3640972 | 3640900 | ID=Msa0344810-mRNA-1:exon:1138;Parent=Msa0344810-mRNA-1 |
| chr3_1 | exon | 3641081 | 3641162 | 3641081 | ID=Msa0344810-mRNA-1:exon:1137;Parent=Msa0344810-mRNA-1 |
| chr3_1 | exon | 3641257 | 3641371 | 3641257 | ID=Msa0344810-mRNA-1:exon:1136;Parent=Msa0344810-mRNA-1 |
| chr3_1 | exon | 3643087 | 3643140 | 3643087 | ID=Msa0344810-mRNA-1:exon:1135;Parent=Msa0344810-mRNA-1 |
| chr3_1 | exon | 3643264 | 3643390 | 3643264 | ID=Msa0344810-mRNA-1:exon:1134;Parent=Msa0344810-mRNA-1 |
| chr3_1 | five_prime_UTR | 3643310 | 3643390 | 3643310 | ID=Msa0344810-mRNA-1:five_prime_utr;Parent=Msa0344810-mRNA-1 |
| chr3_1 | CDS | 3643264 | 3643309 | 3643264 | ID=Msa0344810-mRNA-1:cds;Parent=Msa0344810-mRNA-1 |
| chr3_1 | CDS | 3643087 | 3643140 | 3643087 | ID=Msa0344810-mRNA-1:cds;Parent=Msa0344810-mRNA-1 |
| chr3_1 | CDS | 3641257 | 3641371 | 3641257 | ID=Msa0344810-mRNA-1:cds;Parent=Msa0344810-mRNA-1 |
| chr3_1 | CDS | 3641081 | 3641162 | 3641081 | ID=Msa0344810-mRNA-1:cds;Parent=Msa0344810-mRNA-1 |
| chr3_1 | CDS | 3640900 | 3640972 | 3640900 | ID=Msa0344810-mRNA-1:cds;Parent=Msa0344810-mRNA-1 |
| chr3_1 | CDS | 3640585 | 3640684 | 3640585 | ID=Msa0344810-mRNA-1:cds;Parent=Msa0344810-mRNA-1 |
| chr3_1 | CDS | 3640266 | 3640440 | 3640266 | ID=Msa0344810-mRNA-1:cds;Parent=Msa0344810-mRNA-1 |
| chr3_1 | CDS | 3639977 | 3640171 | 3639977 | ID=Msa0344810-mRNA-1:cds;Parent=Msa0344810-mRNA-1 |
| chr3_1 | CDS | 3639761 | 3639886 | 3639761 | ID=Msa0344810-mRNA-1:cds;Parent=Msa0344810-mRNA-1 |
| chr3_1 | CDS | 3639185 | 3639565 | 3639185 | ID=Msa0344810-mRNA-1:cds;Parent=Msa0344810-mRNA-1 |
| chr3_1 | CDS | 3638979 | 3639089 | 3638979 | ID=Msa0344810-mRNA-1:cds;Parent=Msa0344810-mRNA-1 |
| chr3_1 | CDS | 3638127 | 3638894 | 3638127 | ID=Msa0344810-mRNA-1:cds;Parent=Msa0344810-mRNA-1 |
| chr3_1 | CDS | 3636705 | 3636849 | 3636705 | ID=Msa0344810-mRNA-1:cds;Parent=Msa0344810-mRNA-1 |
| chr3_1 | CDS | 3635386 | 3636584 | 3635386 | ID=Msa0344810-mRNA-1:cds;Parent=Msa0344810-mRNA-1 |
| Gene Sequence |
| Protein sequence |
