AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1268670


Find 362 sgRNAs with CRISPR-Local

Find 1026 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-GE

Chromosome Type Strat End Strand Name
chr8_3 gene 1745077 1759937 1745077 ID=Msa1268670;Name=Msa1268670
chr8_3 mRNA 1745077 1759937 1745077 ID=Msa1268670-mRNA-1;Parent=Msa1268670;Name=Msa1268670-mRNA-1;_AED=0.03;_eAED=0.03;_QI=386|0.93|0.94|1|0.81|0.70|17|752|1523
chr8_3 exon 1745077 1745303 1745077 ID=Msa1268670-mRNA-1:exon:501;Parent=Msa1268670-mRNA-1
chr8_3 exon 1745772 1745888 1745772 ID=Msa1268670-mRNA-1:exon:502;Parent=Msa1268670-mRNA-1
chr8_3 exon 1747389 1747520 1747389 ID=Msa1268670-mRNA-1:exon:503;Parent=Msa1268670-mRNA-1
chr8_3 exon 1747843 1747963 1747843 ID=Msa1268670-mRNA-1:exon:504;Parent=Msa1268670-mRNA-1
chr8_3 exon 1748060 1748184 1748060 ID=Msa1268670-mRNA-1:exon:505;Parent=Msa1268670-mRNA-1
chr8_3 exon 1748615 1748671 1748615 ID=Msa1268670-mRNA-1:exon:506;Parent=Msa1268670-mRNA-1
chr8_3 exon 1748789 1749004 1748789 ID=Msa1268670-mRNA-1:exon:507;Parent=Msa1268670-mRNA-1
chr8_3 exon 1749817 1749972 1749817 ID=Msa1268670-mRNA-1:exon:508;Parent=Msa1268670-mRNA-1
chr8_3 exon 1750074 1750181 1750074 ID=Msa1268670-mRNA-1:exon:509;Parent=Msa1268670-mRNA-1
chr8_3 exon 1750256 1752531 1750256 ID=Msa1268670-mRNA-1:exon:510;Parent=Msa1268670-mRNA-1
chr8_3 exon 1754536 1754708 1754536 ID=Msa1268670-mRNA-1:exon:511;Parent=Msa1268670-mRNA-1
chr8_3 exon 1755203 1755462 1755203 ID=Msa1268670-mRNA-1:exon:512;Parent=Msa1268670-mRNA-1
chr8_3 exon 1755560 1755733 1755560 ID=Msa1268670-mRNA-1:exon:513;Parent=Msa1268670-mRNA-1
chr8_3 exon 1755859 1755996 1755859 ID=Msa1268670-mRNA-1:exon:514;Parent=Msa1268670-mRNA-1
chr8_3 exon 1756929 1757176 1756929 ID=Msa1268670-mRNA-1:exon:515;Parent=Msa1268670-mRNA-1
chr8_3 exon 1757545 1757656 1757545 ID=Msa1268670-mRNA-1:exon:516;Parent=Msa1268670-mRNA-1
chr8_3 exon 1758868 1759937 1758868 ID=Msa1268670-mRNA-1:exon:517;Parent=Msa1268670-mRNA-1
chr8_3 five_prime_UTR 1745077 1745303 1745077 ID=Msa1268670-mRNA-1:five_prime_utr;Parent=Msa1268670-mRNA-1
chr8_3 five_prime_UTR 1745772 1745888 1745772 ID=Msa1268670-mRNA-1:five_prime_utr;Parent=Msa1268670-mRNA-1
chr8_3 five_prime_UTR 1747389 1747430 1747389 ID=Msa1268670-mRNA-1:five_prime_utr;Parent=Msa1268670-mRNA-1
chr8_3 CDS 1747431 1747520 1747431 ID=Msa1268670-mRNA-1:cds;Parent=Msa1268670-mRNA-1
chr8_3 CDS 1747843 1747963 1747843 ID=Msa1268670-mRNA-1:cds;Parent=Msa1268670-mRNA-1
chr8_3 CDS 1748060 1748184 1748060 ID=Msa1268670-mRNA-1:cds;Parent=Msa1268670-mRNA-1
chr8_3 CDS 1748615 1748671 1748615 ID=Msa1268670-mRNA-1:cds;Parent=Msa1268670-mRNA-1
chr8_3 CDS 1748789 1749004 1748789 ID=Msa1268670-mRNA-1:cds;Parent=Msa1268670-mRNA-1
chr8_3 CDS 1749817 1749972 1749817 ID=Msa1268670-mRNA-1:cds;Parent=Msa1268670-mRNA-1
chr8_3 CDS 1750074 1750181 1750074 ID=Msa1268670-mRNA-1:cds;Parent=Msa1268670-mRNA-1
chr8_3 CDS 1750256 1752531 1750256 ID=Msa1268670-mRNA-1:cds;Parent=Msa1268670-mRNA-1
chr8_3 CDS 1754536 1754708 1754536 ID=Msa1268670-mRNA-1:cds;Parent=Msa1268670-mRNA-1
chr8_3 CDS 1755203 1755462 1755203 ID=Msa1268670-mRNA-1:cds;Parent=Msa1268670-mRNA-1
chr8_3 CDS 1755560 1755733 1755560 ID=Msa1268670-mRNA-1:cds;Parent=Msa1268670-mRNA-1
chr8_3 CDS 1755859 1755996 1755859 ID=Msa1268670-mRNA-1:cds;Parent=Msa1268670-mRNA-1
chr8_3 CDS 1756929 1757176 1756929 ID=Msa1268670-mRNA-1:cds;Parent=Msa1268670-mRNA-1
chr8_3 CDS 1757545 1757656 1757545 ID=Msa1268670-mRNA-1:cds;Parent=Msa1268670-mRNA-1
chr8_3 CDS 1758868 1759185 1758868 ID=Msa1268670-mRNA-1:cds;Parent=Msa1268670-mRNA-1
chr8_3 three_prime_UTR 1759186 1759937 1759186 ID=Msa1268670-mRNA-1:three_prime_utr;Parent=Msa1268670-mRNA-1
Gene Sequence

>Msa1268670

ATGGATGATGAAGACCTGGCTACAGTGCACAAAGTGCCATCTGCTCTCATAAAAGCGATAAAGTTTGAGGTTTTAACTGGAGAAGATATAGAGAAGATCTCAGCCTTGGAGATAAATGCACCTGGACAAGTCACTTGTTCTGATCTGGGACTTCCAAATTCTTCTTATGGGTGCACAACATGTGGTTCAAAAGATAGAAAGTCCTGTGAAGGTCATTTTGGAGCTATCAAATTTCCTTTTACCATTTTACATCCATACTTCATGGCAGAGATTGCAGAAATCTTGCAAAAGATTTGCCCTGCATGTAAATCTATTCGACAAGAATTACGTGTTAAGCGTGCTAAATCACTCCTTGGATACAATAATCAGCCCAAAGGTTGCAAATATTGCTGTGGAAATGGTATGGGTCGTTATCCTGCCATGAAATTCAGAGTTTCATCCAATGATTTCTTCAGGAGAACTGCAATCATTGTTGAAGTAAATGATATATCTTTAAATAAGAAAAGAAATTTGGGGCGAGGATTACCTGCCGATTATTGGGACTTTATCCTTGGAGATGTTCAACAAGAAGAAAATCATGTAAATAGAAAGGTTTTATCACCCGTTCAGGTTGAGAATTTATTGAGTGGTGTTGATCCGAACTTCATTGAAAAGTTTATTCCAAGCATGGATTTGGTTGGTCTCAGTTGCTTCTTGGTGGCGCCGAATTGTCATCGTGTGACAGAAGTCCCTCATCGACTTTCAGGGGGATATCCATTGAGTTTCGATAATAGGACCAGGGCTTGCAAGAAATTGGTTGATTTCAGGGGTACAGCAAATGAGTTAAGTTCTCGTGTTTTGGATTGCCTGAGATTTTCCAAGGCAAGTTTCTCTATAAATCCTGACAGAACGCCAGTTAATATTTTTACTGAGTTGCAACAAAGAAAAGTTGGAGAAAATGCTTGCAATTCGTCTGGTTTAAGATGGATGAAAGACGTCGTTCTTGGAAAACGCAACGACAGTACGTTCCGTACTGTGGTTGTTGGTGATCCAGACCTTGAGCTTAGTGAAATTGGTATACCCTGTCAAATTGCAGAAGCTTTGCAGGTTTCTGAGTATGTCAATCGGCAGAATAGGCAAAATTTGCTTTATTGTTGTGAGCTGCGTTTGTTAGAGAAGGGGCAGATAAATGTTCGCAGAAATGGTAATCCAGTAGTTTTGTATAAAAAACAAGATTTGCAGATAGGAGACATATTTTATCGGCCTCTTGTTGATGGGGACAAAGTGTTGATAAATAGGCCTCCTTCCATACACCAACACTCGATGATTGCTCTCACAGTTAGGGTTCTTCCAATATCTTCTGTAGTATCTATTAACCCAATCTGCTGTTCACCTCTGCGTGGGGATTTTGATGGTGACTGCCTTCACGGGTATATTCCACAATCTGTTGGTGCAAGAGTGGAGCTTAATGAGCTGGTTGCTTTGGACAGGCAACTGATTAATGGGCAAAGTGGTGGAAATTTGCTTTCACTTTCCCAGGATAGTTTAACTGCTGCACATTTGCTGTTGGAAGATGGTGTAGGTTTTAATATTTACCAAGTGCAGCAGCTTGAAATGCTCTGTGATAAAGAATTAACATCTCCTGCAATTTTTAAAGCTCCTTCAAGTAATACCCCGTTTTGGAGTGGCAAACAATTGTTCAGCATGCTTTTGCCTTCTAAATTTGACTATGCCTTTCCTTCAAATGATGTTTTTGTTAAAGACGGGGAGCTGATATCTTGTTCCGAGGCTTCTGGGTGGTTACGTGATTCAGAGAACAATGTTTTCCAAAGTCTTGTGGAACATTTTCAAGGGAAGACTTTGGACGTATTGCATGGTGCACAGAAAGCTCTTTGTGAGTGGTTGTCTATGACAGGGTTTAGTGTTTCCCTCTCAGATCTGTACCTTTCTTCTGATTCCTATGCGCGGAAAAACATGATGGAGGAAATCTCCTATGGCTTACGAGTAGCAGAACAGGCTTGTGATTTCAACCAATTATTGGTAGATCATTACTCTGATTTTCTTTCAGCAAGTCCAGAAGAGAATGAAAATTTTGTGACTGTTGATGTGGATCGTCTGAATCATGAAAGGCAAATATCTGCTGCTCTAAGTCAAGCGTCGGTCGATGCTTTTAGACATGTTTTTCGCAATATTCAGAGTTTAGCTGATAAGCATGCGTGCAAGGACAATTCTTTCCTTGCTATGTTTAAGGCTGGAAGCAAGGGTAATTTACTGAAATTAGTGCAACATTCCATGTGCCTTGGACTGCAACATTCTCTGGTTCGCTTGTCATACAGAATTCCCCGTGAACTTTCATGTGCTGGTTGGAACAGTCAAAAGGGGCTTCATTCAGTGGAGATGTCTTCAGATACTCTTGAACCAAACCAGTCTTACATTGCTCATGCTGTGGTTGAGAGCTCTTTTCTTACTGGGTTGAATCCACTTGAATGTTTTGTTCATTCAGTGACAAACCGTGATAGCTCTTTCAGTGACAACGCAGACCTTCCTGGGACATTGACCCGTAGACTTATGTTCTTCATGCGTGATATGTATGATGCATATGATGGAACAGTGAGAAACTTATATGGCAATCAACTTATACAGTTTTCTTATGATGCCGAAGAGGATTCATCTTGTGATAGCTATTTTCGAGAGGATATTATAGGTGGCGAGCCAGTCGGAGCGCTTTCTGCCTGTGCGGTTTCTGAGGCTGCATACAGTGCTTTGAGTCAACCTATTAGTCTACTTGAAGCATCACCGTTGCTGAACTTAAAAAATGTTCTAGAGTGTGGTTCAAGGAAAAAAGGTGGTGATCAGACCGTGTCTTTATTTTTGTCTGAGAAAATTGGTAAACAAAGAAATGGGTTTGAGTATGCAGCACTAGAAGTTAAGAATTATTTGGAAAGATATATGTTCTCAAACATTGTTTCTACTGTCATGATAATATTCACCCCACAGCATTGCAGTCAAGTCAAATACAGTCCTTGGGTTTGCCATTTTCATTTAGACAAGGAAAATGTAACAAGAAGAAAATTAGAAGTGCATTCTATCATTGACTCTCTTTACCAGCAATATGACTCCTTCAGAAGAGAGTCAAAAGTCATTCTTCCCAGTTTGAAAATATCAAGCAAGAAATGGTGTGTAGATTACAAGGCTAATGAAGGTGGAGAAACCTCTGTTTGTAATGAAAAAGATGGTGAAGATTGCATCACTGTTGCAGTTGTCGAAGACTCTAAGAATTCTGTACAACTGGACTCTGTTCGCAAGAGTCTGATACCTTTCCTTCTGCAAACAGCTATAAAAGGATTTTTGGAGATCAAGAAGGTTGACATTCTCTGGAAGGATCTGCCAAAAGTAACGAAATCTTATAATGGTTCTTCTGGTGAACTATACCTGAGGGTTACTATGTCCAGCGGCAATGACAATGGTACATTCTGGGGTAGGCTGATAAATCACTGTCACAGAATAATGCCGTTGATTGACTGGACACGAAGTCATCCTGATAATATTCACCATTTCTGCTCAGCCTTTGGAATCGATGCAGGGTGGCAGCATTATTTCCATAATTTGTCATCTGCAACTTCTGATACTGGCAAGTCAATTCTTCCTAAGCATCTGCGTCTTGTTGCCAACAGTCTTTCAGCTAGTGGAGAGTTTGTGGGATTAAATGCTAAAGGAATGGCGCGGCAAAGAAAACATGCATCCGTTTCATCACCCTTCGTGCAAGCATGCTTTTCTAATCCTGGTAGTTCCTTTTTAAAAGCTGCGAAGTCTGGAGTTGTGGATAATCTCCAGGGCAATCTAGATGCATTGGCTTGGGGAAACTGTCTGCCCATGGGGACAGGTGGACAGTTTGATATCATATACTCAGAGAAGGTAGAGGAGATTGATAAGTCTGTAGATGTGTATGGCCTGCTAGAAACCAGTTTTAACCAGATGGACCAAGAGATTAATACCCTTCAATCTCGCAAATATTCATCTGGAAAATGCAGTTCAGATTTTAGGTCTAAAAATGGGGGTTACACCCCAAAAGAGCCTAAGCAGTGGAAAAGTGTTTTAAGAAATTTCATGACTGCAAATGATATTCAGAGGCTTACTTTTGATGCAAGGGTCATACTGAACAAGTATCAGATTGATCAGACACTAAGTGAGACGGACAAGTTAACAATAATGAAGGTTTTGCATTTTCATCCTCGTAGAGATGAGAAGTTTGGCTCTGGACCACAAGACATAAAGGTTGGATGGCATCCTGAGTTTACAGACAGCCGTTGCTTTTTTATAATACGAAAGGACGGGTCTGTTGAAGATTTTTCATACCGCAAATGCATTCTTGGTGCTCTTGATATTATTGATCCGAAAAAGTCAAAGATCCAAAGGAATAGATGGTCGGGAAATGGTGATATGGAAGCTAAAAAATGGTCGGGAAGTTATGACAAGGAAGCTAAAAAATGGTCGCAAAGTTATGACAAGGAAGCTAAGAAATGGTCAGGAAATGATGACATGGAAGCTAAAAATTGGCCGGGAAATAATGATGTGGAAGTGACTAGCATCTGA

Protein sequence

>Msa1268670

MDDEDLATVHKVPSALIKAIKFEVLTGEDIEKISALEINAPGQVTCSDLGLPNSSYGCTTCGSKDRKSCEGHFGAIKFPFTILHPYFMAEIAEILQKICPACKSIRQELRVKRAKSLLGYNNQPKGCKYCCGNGMGRYPAMKFRVSSNDFFRRTAIIVEVNDISLNKKRNLGRGLPADYWDFILGDVQQEENHVNRKVLSPVQVENLLSGVDPNFIEKFIPSMDLVGLSCFLVAPNCHRVTEVPHRLSGGYPLSFDNRTRACKKLVDFRGTANELSSRVLDCLRFSKASFSINPDRTPVNIFTELQQRKVGENACNSSGLRWMKDVVLGKRNDSTFRTVVVGDPDLELSEIGIPCQIAEALQVSEYVNRQNRQNLLYCCELRLLEKGQINVRRNGNPVVLYKKQDLQIGDIFYRPLVDGDKVLINRPPSIHQHSMIALTVRVLPISSVVSINPICCSPLRGDFDGDCLHGYIPQSVGARVELNELVALDRQLINGQSGGNLLSLSQDSLTAAHLLLEDGVGFNIYQVQQLEMLCDKELTSPAIFKAPSSNTPFWSGKQLFSMLLPSKFDYAFPSNDVFVKDGELISCSEASGWLRDSENNVFQSLVEHFQGKTLDVLHGAQKALCEWLSMTGFSVSLSDLYLSSDSYARKNMMEEISYGLRVAEQACDFNQLLVDHYSDFLSASPEENENFVTVDVDRLNHERQISAALSQASVDAFRHVFRNIQSLADKHACKDNSFLAMFKAGSKGNLLKLVQHSMCLGLQHSLVRLSYRIPRELSCAGWNSQKGLHSVEMSSDTLEPNQSYIAHAVVESSFLTGLNPLECFVHSVTNRDSSFSDNADLPGTLTRRLMFFMRDMYDAYDGTVRNLYGNQLIQFSYDAEEDSSCDSYFREDIIGGEPVGALSACAVSEAAYSALSQPISLLEASPLLNLKNVLECGSRKKGGDQTVSLFLSEKIGKQRNGFEYAALEVKNYLERYMFSNIVSTVMIIFTPQHCSQVKYSPWVCHFHLDKENVTRRKLEVHSIIDSLYQQYDSFRRESKVILPSLKISSKKWCVDYKANEGGETSVCNEKDGEDCITVAVVEDSKNSVQLDSVRKSLIPFLLQTAIKGFLEIKKVDILWKDLPKVTKSYNGSSGELYLRVTMSSGNDNGTFWGRLINHCHRIMPLIDWTRSHPDNIHHFCSAFGIDAGWQHYFHNLSSATSDTGKSILPKHLRLVANSLSASGEFVGLNAKGMARQRKHASVSSPFVQACFSNPGSSFLKAAKSGVVDNLQGNLDALAWGNCLPMGTGGQFDIIYSEKVEEIDKSVDVYGLLETSFNQMDQEINTLQSRKYSSGKCSSDFRSKNGGYTPKEPKQWKSVLRNFMTANDIQRLTFDARVILNKYQIDQTLSETDKLTIMKVLHFHPRRDEKFGSGPQDIKVGWHPEFTDSRCFFIIRKDGSVEDFSYRKCILGALDIIDPKKSKIQRNRWSGNGDMEAKKWSGSYDKEAKKWSQSYDKEAKKWSGNDDMEAKNWPGNNDVEVTSI*