Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0352220 | XP_003593799.2 | 92.231 | 605 | 42 | 2 | 1 | 602 | 1 | 603 | 0.0 | 1142 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0352220 | sp|P26413|HSP70_SOYBN | 68.189 | 613 | 170 | 6 | 1 | 596 | 1 | 605 | 0.0 | 853 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0352220 | A0A396J4A8 | 92.231 | 605 | 42 | 2 | 1 | 602 | 1 | 603 | 0.0 | 1142 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0282600 | Msa0352220 | 0.800433 | 1.444763e-48 | -8.615850e-47 |
Msa0352220 | Msa0399210 | 0.941686 | 2.699049e-101 | -8.615850e-47 |
Msa0352220 | Msa0446510 | 0.932664 | 6.061986e-95 | -8.615850e-47 |
Msa0352220 | Msa0487360 | 0.805774 | 1.134605e-49 | -8.615850e-47 |
Msa0352220 | Msa0493850 | 0.924694 | 5.001466e-90 | -8.615850e-47 |
Msa0352220 | Msa0620490 | 0.807464 | 4.990679e-50 | -8.615850e-47 |
Msa0352220 | Msa0885280 | 0.805954 | 1.040196e-49 | -8.615850e-47 |
Msa0352220 | Msa0907320 | 0.805439 | 1.334402e-49 | -8.615850e-47 |
Msa0352220 | Msa1145760 | 0.805625 | 1.219876e-49 | -8.615850e-47 |
Msa0352220 | Msa1177060 | 0.811648 | 6.301956e-51 | -8.615850e-47 |
Msa0352220 | Msa1428610 | 0.825646 | 4.184896e-54 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0352220 | MtrunA17_Chr2g0284681 | 92.231 | 605 | 42 | 2 | 1 | 602 | 1 | 603 | 0.0 | 1142 |
Msa0352220 | MtrunA17_Chr4g0073741 | 68.352 | 613 | 169 | 6 | 1 | 596 | 1 | 605 | 0.0 | 856 |
Msa0352220 | MtrunA17_Chr4g0031301 | 66.997 | 606 | 175 | 6 | 8 | 596 | 9 | 606 | 0.0 | 820 |
Msa0352220 | MtrunA17_Chr4g0031321 | 66.667 | 606 | 177 | 6 | 8 | 596 | 9 | 606 | 0.0 | 815 |
Msa0352220 | MtrunA17_Chr7g0223181 | 66.227 | 607 | 180 | 6 | 8 | 597 | 9 | 607 | 0.0 | 810 |
Msa0352220 | MtrunA17_Chr7g0262821 | 65.842 | 606 | 182 | 6 | 8 | 596 | 9 | 606 | 0.0 | 806 |
Msa0352220 | MtrunA17_Chr7g0223291 | 66.172 | 606 | 180 | 6 | 8 | 596 | 9 | 606 | 0.0 | 805 |
Msa0352220 | MtrunA17_Chr6g0462681 | 55.167 | 600 | 243 | 6 | 8 | 590 | 9 | 599 | 0.0 | 665 |
Msa0352220 | MtrunA17_Chr6g0462601 | 55.833 | 600 | 239 | 6 | 8 | 590 | 9 | 599 | 0.0 | 652 |
Msa0352220 | MtrunA17_Chr8g0388671 | 55.593 | 599 | 235 | 8 | 2 | 581 | 32 | 618 | 0.0 | 652 |
Msa0352220 | MtrunA17_Chr7g0223741 | 58.541 | 562 | 218 | 7 | 5 | 561 | 6 | 557 | 0.0 | 650 |
Msa0352220 | MtrunA17_Chr8g0388761 | 54.849 | 598 | 239 | 8 | 3 | 581 | 33 | 618 | 0.0 | 649 |
Msa0352220 | MtrunA17_Chr5g0427901 | 54.355 | 620 | 243 | 9 | 8 | 597 | 9 | 618 | 0.0 | 643 |
Msa0352220 | MtrunA17_Chr7g0223751 | 56.940 | 562 | 226 | 9 | 8 | 564 | 9 | 559 | 0.0 | 639 |
Msa0352220 | MtrunA17_Chr7g0223711 | 56.762 | 562 | 228 | 7 | 5 | 561 | 6 | 557 | 0.0 | 638 |
Msa0352220 | MtrunA17_Chr7g0221661 | 54.844 | 609 | 246 | 9 | 8 | 597 | 9 | 607 | 0.0 | 638 |
Msa0352220 | MtrunA17_Chr2g0298851 | 54.207 | 618 | 253 | 10 | 5 | 602 | 6 | 613 | 0.0 | 635 |
Msa0352220 | MtrunA17_Chr2g0293581 | 52.932 | 614 | 260 | 9 | 7 | 600 | 9 | 613 | 0.0 | 628 |
Msa0352220 | MtrunA17_Chr7g0233311 | 57.549 | 563 | 225 | 6 | 8 | 565 | 9 | 562 | 0.0 | 627 |
Msa0352220 | MtrunA17_Chr8g0350731 | 57.245 | 559 | 223 | 8 | 8 | 561 | 37 | 584 | 0.0 | 626 |
Msa0352220 | MtrunA17_Chr7g0223731 | 56.406 | 562 | 229 | 8 | 5 | 561 | 6 | 556 | 0.0 | 624 |
Msa0352220 | MtrunA17_Chr6g0462771 | 52.231 | 605 | 262 | 7 | 5 | 589 | 6 | 603 | 0.0 | 619 |
Msa0352220 | MtrunA17_Chr7g0223721 | 53.008 | 615 | 259 | 10 | 8 | 602 | 9 | 613 | 0.0 | 619 |
Msa0352220 | MtrunA17_Chr7g0223801 | 52.381 | 609 | 259 | 10 | 8 | 597 | 9 | 605 | 0.0 | 617 |
Msa0352220 | MtrunA17_Chr7g0223701 | 53.247 | 616 | 253 | 9 | 8 | 597 | 9 | 615 | 0.0 | 616 |
Msa0352220 | MtrunA17_Chr7g0223781 | 55.654 | 566 | 234 | 8 | 8 | 568 | 9 | 562 | 0.0 | 616 |
Msa0352220 | MtrunA17_Chr6g0462711 | 52.815 | 604 | 261 | 7 | 5 | 589 | 7 | 605 | 0.0 | 616 |
Msa0352220 | MtrunA17_Chr6g0462641 | 52.467 | 608 | 265 | 7 | 1 | 589 | 1 | 603 | 0.0 | 614 |
Msa0352220 | MtrunA17_Chr7g0223621 | 55.160 | 562 | 236 | 8 | 8 | 564 | 9 | 559 | 0.0 | 613 |
Msa0352220 | MtrunA17_Chr7g0225671 | 53.376 | 622 | 259 | 11 | 1 | 602 | 9 | 619 | 0.0 | 613 |
Msa0352220 | MtrunA17_Chr7g0223031 | 54.982 | 562 | 237 | 8 | 5 | 561 | 6 | 556 | 0.0 | 612 |
Msa0352220 | MtrunA17_Chr2g0287631 | 52.520 | 615 | 263 | 9 | 8 | 602 | 9 | 614 | 0.0 | 607 |
Msa0352220 | MtrunA17_Chr7g0223851 | 52.666 | 619 | 261 | 11 | 5 | 602 | 15 | 622 | 0.0 | 604 |
Msa0352220 | MtrunA17_Chr7g0248131 | 55.923 | 574 | 227 | 12 | 8 | 573 | 9 | 564 | 0.0 | 604 |
Msa0352220 | MtrunA17_Chr2g0298861 | 51.597 | 626 | 261 | 12 | 9 | 602 | 10 | 625 | 0.0 | 603 |
Msa0352220 | MtrunA17_Chr4g0040931 | 51.870 | 615 | 266 | 10 | 8 | 602 | 9 | 613 | 0.0 | 602 |
Msa0352220 | MtrunA17_Chr7g0248151 | 55.893 | 560 | 226 | 9 | 8 | 559 | 9 | 555 | 0.0 | 589 |
Msa0352220 | MtrunA17_Chr7g0223631 | 54.204 | 559 | 226 | 10 | 8 | 561 | 9 | 542 | 0.0 | 588 |
Msa0352220 | MtrunA17_Chr7g0233301 | 54.626 | 562 | 216 | 6 | 8 | 567 | 9 | 533 | 0.0 | 584 |
Msa0352220 | MtrunA17_Chr2g0296391 | 56.015 | 532 | 220 | 6 | 4 | 530 | 5 | 527 | 0.0 | 583 |
Msa0352220 | MtrunA17_Chr7g0217971 | 51.082 | 601 | 240 | 10 | 8 | 589 | 9 | 574 | 0.0 | 574 |
Msa0352220 | MtrunA17_Chr7g0223821 | 51.125 | 622 | 269 | 10 | 5 | 602 | 6 | 616 | 0.0 | 573 |
Msa0352220 | MtrunA17_Chr7g0215261 | 52.920 | 565 | 215 | 8 | 7 | 565 | 8 | 527 | 0.0 | 557 |
Msa0352220 | MtrunA17_Chr8g0390821 | 47.121 | 660 | 254 | 13 | 8 | 597 | 11 | 645 | 0.0 | 551 |
Msa0352220 | MtrunA17_Chr6g0462611 | 52.277 | 549 | 234 | 7 | 59 | 590 | 10 | 547 | 0.0 | 551 |
Msa0352220 | MtrunA17_Chr4g0012541 | 49.435 | 619 | 272 | 12 | 5 | 602 | 6 | 604 | 0.0 | 551 |
Msa0352220 | MtrunA17_Chr7g0223831 | 52.473 | 566 | 226 | 9 | 5 | 565 | 6 | 533 | 0.0 | 548 |
Msa0352220 | MtrunA17_Chr2g0331381 | 52.407 | 540 | 186 | 8 | 9 | 546 | 7 | 477 | 0.0 | 546 |
Msa0352220 | MtrunA17_Chr7g0223541 | 54.125 | 497 | 215 | 6 | 71 | 564 | 31 | 517 | 0.0 | 523 |
Msa0352220 | MtrunA17_Chr7g0228281 | 47.403 | 616 | 249 | 10 | 7 | 602 | 69 | 629 | 1.33e-179 | 522 |
Msa0352220 | MtrunA17_Chr2g0293601 | 53.295 | 516 | 199 | 7 | 8 | 521 | 9 | 484 | 9.10e-179 | 514 |
Msa0352220 | MtrunA17_Chr7g0223681 | 54.298 | 477 | 204 | 7 | 88 | 561 | 2 | 467 | 2.68e-175 | 508 |
Msa0352220 | MtrunA17_Chr2g0299921 | 66.581 | 389 | 120 | 4 | 8 | 396 | 1029 | 1407 | 2.54e-168 | 523 |
Msa0352220 | MtrunA17_Chr2g0299921 | 65.979 | 388 | 121 | 6 | 8 | 394 | 1413 | 1790 | 4.47e-155 | 488 |
Msa0352220 | MtrunA17_Chr2g0299821 | 60.880 | 409 | 145 | 6 | 9 | 411 | 10 | 409 | 1.04e-166 | 484 |
Msa0352220 | MtrunA17_Chr2g0299821 | 41.429 | 140 | 59 | 3 | 425 | 541 | 343 | 482 | 8.04e-22 | 99.0 |
Msa0352220 | MtrunA17_Chr2g0293561 | 62.567 | 374 | 130 | 4 | 8 | 379 | 9 | 374 | 2.06e-165 | 477 |
Msa0352220 | MtrunA17_Chr2g0299851 | 63.824 | 387 | 130 | 5 | 8 | 394 | 1038 | 1414 | 1.31e-162 | 501 |
Msa0352220 | MtrunA17_Chr2g0279901 | 46.037 | 593 | 275 | 16 | 9 | 583 | 57 | 622 | 2.12e-161 | 477 |
Msa0352220 | MtrunA17_Chr4g0049501 | 44.610 | 603 | 294 | 14 | 6 | 591 | 51 | 630 | 2.15e-157 | 467 |
Msa0352220 | MtrunA17_Chr2g0299791 | 63.824 | 387 | 130 | 5 | 8 | 394 | 1042 | 1418 | 5.32e-157 | 486 |
Msa0352220 | MtrunA17_Chr6g0462861 | 46.235 | 571 | 261 | 14 | 8 | 563 | 9 | 548 | 2.32e-153 | 456 |
Msa0352220 | MtrunA17_Chr1g0166551 | 43.257 | 608 | 208 | 11 | 8 | 597 | 5 | 493 | 1.14e-150 | 443 |
Msa0352220 | MtrunA17_Chr2g0299881 | 60.870 | 391 | 139 | 6 | 8 | 394 | 1038 | 1418 | 1.36e-147 | 462 |
Msa0352220 | MtrunA17_Chr2g0299881 | 62.121 | 66 | 21 | 1 | 184 | 249 | 1414 | 1475 | 3.55e-16 | 82.8 |
Msa0352220 | MtrunA17_Chr2g0277021 | 45.095 | 581 | 285 | 14 | 7 | 575 | 70 | 628 | 2.86e-146 | 439 |
Msa0352220 | MtrunA17_Chr2g0293271 | 47.865 | 445 | 148 | 6 | 20 | 459 | 43 | 408 | 7.14e-131 | 389 |
Msa0352220 | MtrunA17_Chr1g0151991 | 62.069 | 290 | 104 | 3 | 5 | 292 | 6 | 291 | 8.98e-125 | 369 |
Msa0352220 | MtrunA17_Chr7g0245521 | 65.056 | 269 | 88 | 3 | 8 | 274 | 9 | 273 | 4.22e-119 | 354 |
Msa0352220 | MtrunA17_Chr6g0462631 | 48.529 | 340 | 124 | 5 | 83 | 422 | 9 | 297 | 1.49e-96 | 297 |
Msa0352220 | MtrunA17_Chr6g0462751 | 42.936 | 361 | 139 | 5 | 61 | 419 | 9 | 304 | 3.32e-90 | 281 |
Msa0352220 | MtrunA17_Chr7g0223761 | 38.889 | 378 | 170 | 5 | 240 | 602 | 3 | 334 | 2.94e-80 | 256 |
Msa0352220 | MtrunA17_Chr7g0223671 | 59.896 | 192 | 75 | 1 | 71 | 262 | 8 | 197 | 3.31e-78 | 246 |
Msa0352220 | MtrunA17_Chr1g0188601 | 62.176 | 193 | 69 | 2 | 91 | 283 | 3 | 191 | 4.37e-77 | 243 |
Msa0352220 | MtrunA17_Chr4g0004331 | 33.857 | 446 | 271 | 6 | 9 | 441 | 4 | 438 | 4.76e-75 | 256 |
Msa0352220 | MtrunA17_Chr5g0394391 | 31.755 | 507 | 316 | 12 | 8 | 498 | 29 | 521 | 3.31e-74 | 248 |
Msa0352220 | MtrunA17_Chr2g0331901 | 31.866 | 477 | 299 | 8 | 9 | 470 | 4 | 469 | 8.57e-74 | 253 |
Msa0352220 | MtrunA17_Chr7g0245531 | 44.013 | 309 | 150 | 6 | 306 | 597 | 2 | 304 | 8.78e-73 | 236 |
Msa0352220 | MtrunA17_Chr6g0462791 | 60.556 | 180 | 66 | 3 | 105 | 284 | 1 | 175 | 3.17e-68 | 219 |
Msa0352220 | MtrunA17_Chr5g0444001 | 31.111 | 450 | 290 | 7 | 9 | 452 | 4 | 439 | 2.17e-66 | 226 |
Msa0352220 | MtrunA17_Chr3g0098761 | 29.365 | 504 | 334 | 8 | 9 | 502 | 4 | 495 | 5.23e-66 | 230 |
Msa0352220 | MtrunA17_Chr1g0152001 | 40.594 | 303 | 156 | 7 | 317 | 602 | 2 | 297 | 4.80e-65 | 216 |
Msa0352220 | MtrunA17_Chr7g0223771 | 64.935 | 154 | 52 | 1 | 91 | 244 | 2 | 153 | 1.02e-64 | 209 |
Msa0352220 | MtrunA17_Chr4g0060241 | 30.315 | 508 | 316 | 12 | 9 | 500 | 21 | 506 | 1.82e-57 | 202 |
Msa0352220 | MtrunA17_Chr4g0064621 | 31.879 | 527 | 326 | 13 | 8 | 512 | 140 | 655 | 3.26e-57 | 204 |
Msa0352220 | MtrunA17_Chr1g0188611 | 47.347 | 245 | 120 | 5 | 323 | 564 | 1 | 239 | 1.65e-55 | 189 |
Msa0352220 | MtrunA17_Chr7g0223861 | 65.414 | 133 | 44 | 1 | 75 | 207 | 4 | 134 | 2.44e-54 | 181 |
Msa0352220 | MtrunA17_Chr3g0120101 | 26.554 | 531 | 346 | 11 | 6 | 502 | 24 | 544 | 1.58e-51 | 190 |
Msa0352220 | MtrunA17_Chr4g0046881 | 61.074 | 149 | 51 | 3 | 128 | 276 | 10 | 151 | 1.58e-51 | 174 |
Msa0352220 | MtrunA17_Chr6g0462701 | 52.353 | 170 | 53 | 3 | 102 | 271 | 27 | 168 | 2.72e-46 | 160 |
Msa0352220 | MtrunA17_Chr5g0394231 | 40.693 | 231 | 82 | 5 | 71 | 300 | 5 | 181 | 1.87e-45 | 159 |
Msa0352220 | MtrunA17_Chr5g0442171 | 32.845 | 341 | 189 | 11 | 169 | 491 | 1 | 319 | 1.63e-43 | 158 |
Msa0352220 | MtrunA17_Chr6g0462691 | 52.055 | 146 | 63 | 2 | 323 | 465 | 1 | 142 | 2.47e-43 | 152 |
Msa0352220 | MtrunA17_Chr5g0394221 | 35.556 | 270 | 160 | 6 | 299 | 563 | 68 | 328 | 5.82e-42 | 155 |
Msa0352220 | MtrunA17_Chr6g0481391 | 53.226 | 124 | 53 | 2 | 35 | 158 | 13 | 131 | 1.12e-34 | 127 |
Msa0352220 | MtrunA17_Chr2g0284661 | 62.500 | 96 | 33 | 1 | 360 | 452 | 48 | 143 | 4.62e-30 | 115 |
Msa0352220 | MtrunA17_Chr2g0284661 | 83.636 | 55 | 9 | 0 | 224 | 278 | 5 | 59 | 9.63e-24 | 97.4 |
Msa0352220 | MtrunA17_Chr4g0046871 | 54.717 | 106 | 43 | 2 | 336 | 441 | 5 | 105 | 7.54e-30 | 113 |
Msa0352220 | MtrunA17_Chr6g0462621 | 70.423 | 71 | 20 | 1 | 1 | 70 | 1 | 71 | 2.88e-28 | 107 |
Msa0352220 | MtrunA17_Chr7g0245541 | 34.896 | 192 | 107 | 3 | 423 | 597 | 1 | 191 | 1.77e-27 | 110 |
Msa0352220 | MtrunA17_Chr6g0481381 | 63.514 | 74 | 27 | 0 | 175 | 248 | 1 | 74 | 2.34e-25 | 103 |
Msa0352220 | MtrunA17_Chr7g0223691 | 70.769 | 65 | 17 | 1 | 8 | 70 | 9 | 73 | 4.12e-25 | 99.0 |
Msa0352220 | MtrunA17_Chr1g0188591 | 64.706 | 68 | 22 | 1 | 5 | 70 | 6 | 73 | 8.13e-24 | 95.9 |
Msa0352220 | MtrunA17_Chr7g0223791 | 52.439 | 82 | 31 | 2 | 53 | 134 | 18 | 91 | 2.37e-19 | 86.3 |
Msa0352220 | MtrunA17_Chr7g0223791 | 37.975 | 79 | 49 | 0 | 486 | 564 | 90 | 168 | 3.34e-12 | 65.5 |
Msa0352220 | MtrunA17_Chr7g0223881 | 50.667 | 75 | 36 | 1 | 289 | 363 | 9 | 82 | 4.30e-18 | 79.3 |
Msa0352220 | MtrunA17_Chr6g0462801 | 53.030 | 66 | 30 | 1 | 323 | 387 | 1 | 66 | 6.72e-16 | 72.8 |
Msa0352220 | MtrunA17_Chr7g0221651 | 40.698 | 86 | 49 | 1 | 214 | 299 | 1 | 84 | 6.35e-15 | 70.5 |
Msa0352220 | MtrunA17_Chr4g0064651 | 38.462 | 91 | 53 | 1 | 404 | 491 | 30 | 120 | 1.25e-14 | 70.9 |
Msa0352220 | MtrunA17_Chr2g0299891 | 65.909 | 44 | 15 | 0 | 317 | 360 | 2 | 45 | 5.61e-14 | 67.4 |
Msa0352220 | MtrunA17_Chr5g0442161 | 30.065 | 153 | 100 | 4 | 8 | 156 | 28 | 177 | 6.38e-13 | 67.4 |
Msa0352220 | MtrunA17_Chr2g0299941 | 60.000 | 55 | 19 | 1 | 405 | 456 | 23 | 77 | 1.14e-11 | 61.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0352220 | AT1G16030.1 | 67.047 | 613 | 177 | 6 | 1 | 596 | 1 | 605 | 0.0 | 832 |
Msa0352220 | AT3G12580.1 | 67.051 | 607 | 175 | 6 | 8 | 597 | 9 | 607 | 0.0 | 814 |
Msa0352220 | AT5G02500.1 | 66.227 | 607 | 180 | 6 | 8 | 597 | 9 | 607 | 0.0 | 808 |
Msa0352220 | AT3G09440.1 | 66.063 | 607 | 181 | 6 | 8 | 597 | 9 | 607 | 0.0 | 800 |
Msa0352220 | AT3G09440.4 | 66.063 | 607 | 181 | 6 | 8 | 597 | 9 | 607 | 0.0 | 800 |
Msa0352220 | AT3G09440.2 | 66.063 | 607 | 181 | 6 | 8 | 597 | 9 | 607 | 0.0 | 800 |
Msa0352220 | AT3G09440.3 | 66.063 | 607 | 181 | 6 | 8 | 597 | 9 | 607 | 0.0 | 800 |
Msa0352220 | AT5G02490.1 | 65.404 | 607 | 185 | 6 | 8 | 597 | 9 | 607 | 0.0 | 795 |
Msa0352220 | AT1G56410.1 | 65.124 | 605 | 188 | 7 | 8 | 597 | 9 | 605 | 0.0 | 787 |
Msa0352220 | AT5G42020.1 | 55.863 | 614 | 240 | 8 | 2 | 596 | 31 | 632 | 0.0 | 672 |
Msa0352220 | AT5G42020.3 | 55.863 | 614 | 240 | 8 | 2 | 596 | 36 | 637 | 0.0 | 672 |
Msa0352220 | AT5G28540.1 | 55.700 | 614 | 241 | 8 | 2 | 596 | 31 | 632 | 0.0 | 669 |
Msa0352220 | AT1G09080.2 | 55.776 | 606 | 238 | 7 | 9 | 596 | 43 | 636 | 0.0 | 651 |
Msa0352220 | AT1G09080.1 | 55.776 | 606 | 238 | 7 | 9 | 596 | 53 | 646 | 0.0 | 651 |
Msa0352220 | AT5G42020.2 | 52.000 | 600 | 230 | 11 | 2 | 596 | 31 | 577 | 0.0 | 585 |
Msa0352220 | AT5G02500.2 | 70.558 | 394 | 108 | 4 | 8 | 401 | 9 | 394 | 0.0 | 571 |
Msa0352220 | AT5G02500.2 | 45.652 | 92 | 36 | 1 | 520 | 597 | 386 | 477 | 8.66e-16 | 80.9 |
Msa0352220 | AT5G09590.1 | 45.983 | 585 | 277 | 15 | 9 | 577 | 60 | 621 | 1.60e-156 | 465 |
Msa0352220 | AT4G37910.1 | 46.316 | 570 | 268 | 13 | 9 | 563 | 55 | 601 | 2.15e-151 | 452 |
Msa0352220 | AT4G37910.2 | 46.316 | 570 | 268 | 13 | 9 | 563 | 55 | 601 | 2.15e-151 | 452 |
Msa0352220 | AT5G49910.1 | 44.234 | 581 | 290 | 14 | 7 | 575 | 79 | 637 | 1.19e-144 | 436 |
Msa0352220 | AT4G24280.1 | 43.688 | 602 | 297 | 15 | 7 | 599 | 79 | 647 | 2.40e-144 | 435 |
Msa0352220 | AT1G79930.2 | 34.081 | 446 | 270 | 6 | 9 | 441 | 4 | 438 | 1.35e-78 | 265 |
Msa0352220 | AT1G79930.1 | 34.081 | 446 | 270 | 6 | 9 | 441 | 4 | 438 | 2.68e-78 | 265 |
Msa0352220 | AT1G79920.1 | 34.081 | 446 | 270 | 6 | 9 | 441 | 4 | 438 | 7.55e-78 | 261 |
Msa0352220 | AT1G79920.3 | 34.081 | 446 | 270 | 6 | 9 | 441 | 4 | 438 | 1.01e-77 | 261 |
Msa0352220 | AT1G79920.2 | 34.081 | 446 | 270 | 6 | 9 | 441 | 4 | 438 | 1.01e-77 | 261 |
Msa0352220 | AT1G79920.4 | 34.081 | 446 | 270 | 6 | 9 | 441 | 4 | 438 | 1.01e-77 | 261 |
Msa0352220 | AT1G11660.4 | 28.418 | 651 | 391 | 16 | 9 | 602 | 4 | 636 | 4.75e-73 | 249 |
Msa0352220 | AT1G11660.3 | 28.418 | 651 | 391 | 16 | 9 | 602 | 4 | 636 | 4.75e-73 | 249 |
Msa0352220 | AT1G11660.1 | 28.418 | 651 | 391 | 16 | 9 | 602 | 4 | 636 | 4.75e-73 | 249 |
Msa0352220 | AT2G32120.1 | 30.077 | 522 | 322 | 13 | 8 | 512 | 30 | 525 | 2.94e-65 | 224 |
Msa0352220 | AT2G32120.2 | 30.077 | 522 | 322 | 13 | 8 | 512 | 30 | 525 | 2.94e-65 | 224 |
Msa0352220 | AT1G11660.2 | 28.247 | 616 | 367 | 16 | 44 | 602 | 2 | 599 | 4.14e-64 | 224 |
Msa0352220 | AT4G16660.1 | 26.154 | 455 | 303 | 8 | 5 | 436 | 23 | 467 | 4.54e-48 | 181 |
Msa0352220 | AT4G16660.2 | 26.154 | 455 | 303 | 8 | 5 | 436 | 47 | 491 | 4.96e-48 | 181 |
Find 123 sgRNAs with CRISPR-Local
Find 294 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGAAATTGCTGAAACTTATT+TGG | 0.082085 | 3_1:-20601714 | Msa0352220:CDS |
CATGGTGTTGTCTAAATTAA+AGG | 0.157364 | 3_1:-20601735 | Msa0352220:CDS |
TCAAAACAAATATTGATATT+TGG | 0.181030 | 3_1:+20600663 | None:intergenic |
TTGATATTTGGAACCTTTCT+AGG | 0.182799 | 3_1:+20600675 | None:intergenic |
ACTGCAGCTGCTATTGCTTA+TGG | 0.208608 | 3_1:-20601563 | Msa0352220:CDS |
TGGTTTGGAACAACCTTAAA+AGG | 0.212043 | 3_1:+20601830 | None:intergenic |
TGTTGATGTTAATGGAATTT+TGG | 0.222928 | 3_1:-20600640 | Msa0352220:CDS |
GTTTCAACACCAAGACTAAA+AGG | 0.273894 | 3_1:+20600876 | None:intergenic |
CAATCATGGGTTTGTCTTTG+TGG | 0.290878 | 3_1:+20601810 | None:intergenic |
CAGTGAGAATTCCAAAGCTT+TGG | 0.318063 | 3_1:-20601321 | Msa0352220:CDS |
AGAAGCAGGAGTTGGAAAAT+AGG | 0.326412 | 3_1:-20600335 | Msa0352220:CDS |
CCTGATGAAGCTGTGGCTTA+TGG | 0.330474 | 3_1:-20600975 | Msa0352220:CDS |
AATGTTCTTGTCTTTGATCT+TGG | 0.331932 | 3_1:-20601506 | Msa0352220:CDS |
AGTGAGAATTCCAAAGCTTT+GGG | 0.334628 | 3_1:-20601320 | Msa0352220:CDS |
GAAATTGCTGAAACTTATTT+GGG | 0.342870 | 3_1:-20601713 | Msa0352220:CDS |
ACACGGTTCCCTTGGTCGTT+TGG | 0.354947 | 3_1:+20602013 | None:intergenic |
CGAAGGAATGTTCCAGGTTA+AGG | 0.357597 | 3_1:-20601447 | Msa0352220:CDS |
GAGGGATGCCGAGCGGTATA+AGG | 0.359508 | 3_1:-20600520 | Msa0352220:CDS |
TTCAGTAGTTGTTGAATCTT+CGG | 0.360449 | 3_1:+20601050 | None:intergenic |
ACTTTGGGAGATACTCATTT+GGG | 0.360641 | 3_1:-20601422 | Msa0352220:CDS |
TTCCAGGTTAAGGCCACTTT+GGG | 0.364020 | 3_1:-20601437 | Msa0352220:CDS |
ACCGATACTGAAAGATTAAT+AGG | 0.373414 | 3_1:-20601968 | Msa0352220:CDS |
TTATGTCTTGTTGGACTGAT+TGG | 0.374106 | 3_1:+20601861 | None:intergenic |
AGCTGCTATTGCTTATGGTT+TGG | 0.376546 | 3_1:-20601558 | Msa0352220:CDS |
CACTTTGGGAGATACTCATT+TGG | 0.379211 | 3_1:-20601423 | Msa0352220:CDS |
ATGGGTTTGTCTTTGTGGTT+TGG | 0.379293 | 3_1:+20601815 | None:intergenic |
ACTCATCAATTTCTGCCAAT+TGG | 0.383486 | 3_1:+20600367 | None:intergenic |
TCCAACAAGACATAAGGTTT+TGG | 0.384795 | 3_1:-20601853 | Msa0352220:CDS |
AGGCAGAGGATGAGGAGGTT+AGG | 0.400721 | 3_1:-20600500 | Msa0352220:CDS |
TCTTAACCTCCCCAAAGCTT+TGG | 0.400779 | 3_1:+20601310 | None:intergenic |
ACTCAACCTTCCCTCCTTGT+TGG | 0.402188 | 3_1:+20600566 | None:intergenic |
CAATAACAAATTCATGAACT+TGG | 0.402514 | 3_1:+20601093 | None:intergenic |
CTTGTCTTTGATCTTGGTGG+TGG | 0.402810 | 3_1:-20601500 | Msa0352220:CDS |
GCCAAAACCTTATGTCTTGT+TGG | 0.404961 | 3_1:+20601852 | None:intergenic |
GAAGCAGGAGTTGGAAAATA+GGG | 0.411652 | 3_1:-20600334 | Msa0352220:CDS |
TTTGATGCCAAACGTTTGAT+TGG | 0.412646 | 3_1:-20601899 | Msa0352220:CDS |
GTTCTTGTCTTTGATCTTGG+TGG | 0.414303 | 3_1:-20601503 | Msa0352220:CDS |
GTTCATGAATTTGTTATTGT+CGG | 0.430114 | 3_1:-20601089 | Msa0352220:CDS |
TTTGATCAAAACTTTACCTT+GGG | 0.431046 | 3_1:+20600776 | None:intergenic |
AGAATTATGTTTATGAAATG+AGG | 0.432257 | 3_1:-20600449 | Msa0352220:CDS |
GTAGGGATCCTAGTATTCTT+CGG | 0.433514 | 3_1:+20600825 | None:intergenic |
ATGAAATGAGGGAGAGAGTG+AGG | 0.434187 | 3_1:-20600437 | Msa0352220:CDS |
TTTGTAATTGACAACAATCA+TGG | 0.440479 | 3_1:+20601796 | None:intergenic |
CTCCCAAAGTGGCCTTAACC+TGG | 0.442345 | 3_1:+20601435 | None:intergenic |
TGTTGACGAAGGAATGTTCC+AGG | 0.444778 | 3_1:-20601453 | Msa0352220:CDS |
GTTCCAGGTTAAGGCCACTT+TGG | 0.448544 | 3_1:-20601438 | Msa0352220:CDS |
TCGGTGAAGGCAACGTAAGA+AGG | 0.448873 | 3_1:+20601986 | None:intergenic |
GGATGAGGAGGTTAGGAAGA+AGG | 0.449706 | 3_1:-20600493 | Msa0352220:CDS |
GATTGAAGGCTTATTGCTGT+TGG | 0.451601 | 3_1:-20600907 | Msa0352220:CDS |
ATGCTCTTTAGTACCTAGAA+AGG | 0.452071 | 3_1:-20600688 | Msa0352220:CDS |
CCATAAGCCACAGCTTCATC+AGG | 0.453102 | 3_1:+20600975 | None:intergenic |
ATCATTCTTCTCATCTCTTG+AGG | 0.461303 | 3_1:+20600543 | None:intergenic |
AGTCTTGGTGTTGAAACTAA+AGG | 0.463181 | 3_1:-20600870 | Msa0352220:CDS |
TATGAAATAATTCAACAAGA+TGG | 0.465475 | 3_1:+20601369 | None:intergenic |
ACTGCTGAAGATAAGACAAA+AGG | 0.472237 | 3_1:-20600612 | Msa0352220:CDS |
ACCTATTAATCTTTCAGTAT+CGG | 0.473250 | 3_1:+20601967 | None:intergenic |
GCGGTATAAGGCAGAGGATG+AGG | 0.474792 | 3_1:-20600508 | Msa0352220:CDS |
CTTTGATCAAAACTTTACCT+TGG | 0.475667 | 3_1:+20600775 | None:intergenic |
GCGATGACCAATCAAACGTT+TGG | 0.484985 | 3_1:+20601892 | None:intergenic |
AGGAGAACATGCTAAGACTA+AGG | 0.487241 | 3_1:-20600745 | Msa0352220:CDS |
GAGGAAGCTTGAAAAGGTAG+TGG | 0.489230 | 3_1:-20600418 | Msa0352220:CDS |
GAAGGAGACAAGAAGATTGA+AGG | 0.489825 | 3_1:-20600921 | Msa0352220:CDS |
TGAGTTTGAATTCAAGAAGC+AGG | 0.491801 | 3_1:-20600349 | Msa0352220:CDS |
TGAATTCAAGAAGCAGGAGT+TGG | 0.497584 | 3_1:-20600343 | Msa0352220:CDS |
GATCCTCATCACATTAAAAC+CGG | 0.502743 | 3_1:+20601598 | None:intergenic |
GAGAGTGAGGAAGCTTGAAA+AGG | 0.502774 | 3_1:-20600424 | Msa0352220:CDS |
GAATTATGTTTATGAAATGA+GGG | 0.504803 | 3_1:-20600448 | Msa0352220:CDS |
ATGGCTTGACAGAAACCAAT+TGG | 0.505887 | 3_1:-20600382 | Msa0352220:CDS |
CTGCTGAAGATAAGACAAAA+GGG | 0.507869 | 3_1:-20600611 | Msa0352220:CDS |
AATCAGTCCAACAAGACATA+AGG | 0.516258 | 3_1:-20601859 | Msa0352220:CDS |
AAGGGGTGACACGGTTCCCT+TGG | 0.517703 | 3_1:+20602005 | None:intergenic |
TGTACCAAGGTCAATGCCTA+TGG | 0.520221 | 3_1:+20602084 | None:intergenic |
CATGAATTTGTTATTGTCGG+AGG | 0.522698 | 3_1:-20601086 | Msa0352220:CDS |
TGTGAGTTGTTGAAGTAAGC+AGG | 0.526143 | 3_1:+20601653 | None:intergenic |
TTGTAATTGACAACAATCAT+GGG | 0.527199 | 3_1:+20601797 | None:intergenic |
CGGTGAAGGCAACGTAAGAA+GGG | 0.529846 | 3_1:+20601987 | None:intergenic |
AGCTTGATTCACTATGTGAA+GGG | 0.532350 | 3_1:-20601232 | Msa0352220:CDS |
CAAAACTTTACCTTGGGCTG+TGG | 0.533300 | 3_1:+20600782 | None:intergenic |
TAGTGGAGGAAAGTATAGAA+TGG | 0.539580 | 3_1:-20600401 | Msa0352220:CDS |
TCCTTCGTCAACAGTCACTA+AGG | 0.546693 | 3_1:+20601463 | None:intergenic |
TGCCGAGCGGTATAAGGCAG+AGG | 0.550389 | 3_1:-20600514 | Msa0352220:CDS |
ACCTCAAGAGATATCTTCCA+TGG | 0.553297 | 3_1:-20601753 | Msa0352220:CDS |
ATGAATTTGTTATTGTCGGA+GGG | 0.553906 | 3_1:-20601085 | Msa0352220:CDS |
ATTTCATAGAAAGTACAAGA+AGG | 0.557642 | 3_1:-20601354 | Msa0352220:CDS |
ATCCTCTGCCTTATACCGCT+CGG | 0.563812 | 3_1:+20600512 | None:intergenic |
GCAGCAATATTGAATACTGA+AGG | 0.571285 | 3_1:-20600939 | Msa0352220:CDS |
TTGGGAGATACTCATTTGGG+TGG | 0.571754 | 3_1:-20601419 | Msa0352220:CDS |
GAAGATTCAACAACTACTGA+AGG | 0.574421 | 3_1:-20601048 | Msa0352220:CDS |
GACAAGAAAATGTGGAGAGA+AGG | 0.578701 | 3_1:-20601536 | Msa0352220:CDS |
ATGATTGTTGTCAATTACAA+AGG | 0.584826 | 3_1:-20601794 | Msa0352220:CDS |
TAATCTTTCAGTATCGGTGA+AGG | 0.586135 | 3_1:+20601973 | None:intergenic |
AGACAAGCTACAAAAGATGC+AGG | 0.588448 | 3_1:-20601629 | Msa0352220:CDS |
ATCATTATCACCAACAAGGA+GGG | 0.590966 | 3_1:-20600576 | Msa0352220:CDS |
AGAGATGAGAAGAATGATGA+GGG | 0.595789 | 3_1:-20600538 | Msa0352220:CDS |
GAAGCTTGAAAAGGTAGTGG+AGG | 0.595927 | 3_1:-20600415 | Msa0352220:CDS |
AAGGAAATGTTTAGTGTCAA+CGG | 0.596200 | 3_1:-20601029 | Msa0352220:CDS |
TGTGGAGAAGTGTTTGATTG+AGG | 0.604035 | 3_1:-20601132 | Msa0352220:CDS |
TACAGCTGTAGCTTGTACCA+AGG | 0.607846 | 3_1:+20602071 | None:intergenic |
AGAATTCCAAAGCTTTGGGG+AGG | 0.611200 | 3_1:-20601316 | Msa0352220:CDS |
CATTAATCCTGATGAAGCTG+TGG | 0.613030 | 3_1:-20600982 | Msa0352220:CDS |
TAAGCAATAGCAGCTGCAGT+AGG | 0.618882 | 3_1:+20601566 | None:intergenic |
GTGAGAATTCCAAAGCTTTG+GGG | 0.624343 | 3_1:-20601319 | Msa0352220:CDS |
AAGAGATGAGAAGAATGATG+AGG | 0.628540 | 3_1:-20600539 | Msa0352220:CDS |
CAACGTAAGAAGGGGTGACA+CGG | 0.629570 | 3_1:+20601996 | None:intergenic |
AGATCATTCCAAACGACCAA+GGG | 0.630317 | 3_1:-20602021 | Msa0352220:CDS |
GAGATCATTCCAAACGACCA+AGG | 0.630381 | 3_1:-20602022 | Msa0352220:CDS |
ATGGTTTGGACAAGAAAATG+TGG | 0.630603 | 3_1:-20601544 | Msa0352220:CDS |
TTATCACCAACAAGGAGGGA+AGG | 0.634341 | 3_1:-20600572 | Msa0352220:CDS |
GAGCTTGATTCACTATGTGA+AGG | 0.634799 | 3_1:-20601233 | Msa0352220:CDS |
CAAATGAGTATCTCCCAAAG+TGG | 0.637746 | 3_1:+20601424 | None:intergenic |
AAAGCCATAGGCATTGACCT+TGG | 0.638972 | 3_1:-20602088 | Msa0352220:CDS |
TCCTTAGTGACTGTTGACGA+AGG | 0.640013 | 3_1:-20601464 | Msa0352220:CDS |
ACCATGGAAGATATCTCTTG+AGG | 0.641800 | 3_1:+20601752 | None:intergenic |
GTATAAGGCAGAGGATGAGG+AGG | 0.650304 | 3_1:-20600505 | Msa0352220:CDS |
CAGCATGCGAGAAAGCAAAG+AGG | 0.658762 | 3_1:-20601286 | Msa0352220:CDS |
GATCATTATCACCAACAAGG+AGG | 0.670278 | 3_1:-20600577 | Msa0352220:CDS |
GGTGAAGGCAACGTAAGAAG+GGG | 0.671684 | 3_1:+20601988 | None:intergenic |
CTTTAATTTAGACAACACCA+TGG | 0.682894 | 3_1:+20601736 | None:intergenic |
CAGAAAGTGCATGAAGACTG+TGG | 0.701540 | 3_1:-20601150 | Msa0352220:CDS |
CTTGGTGTTGAAACTAAAGG+TGG | 0.707841 | 3_1:-20600867 | Msa0352220:CDS |
GAATGATGAGGGATGCCGAG+CGG | 0.719182 | 3_1:-20600527 | Msa0352220:CDS |
GAAGATCATTATCACCAACA+AGG | 0.723817 | 3_1:-20600580 | Msa0352220:CDS |
GCTACAGCTGTATTGCAGTG+TGG | 0.732257 | 3_1:-20602060 | Msa0352220:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TCAAAACAAATATTGATATT+TGG | + | chr3_1:20601766-20601785 | None:intergenic | 15.0% |
!! | TCAAAACAAATATTGATATT+TGG | + | chr3_1:20601766-20601785 | None:intergenic | 15.0% |
!!! | TGTTGATTTTGATAACAATT+TGG | - | chr3_1:20601030-20601049 | Msa0352220:CDS | 20.0% |
!! | TATGAAATAATTCAACAAGA+TGG | + | chr3_1:20601060-20601079 | None:intergenic | 20.0% |
!!! | TTTTTTTGAGGAAATAAACA+AGG | - | chr3_1:20601246-20601265 | Msa0352220:CDS | 20.0% |
!! | AGAATTATGTTTATGAAATG+AGG | - | chr3_1:20601977-20601996 | Msa0352220:CDS | 20.0% |
!! | GAATTATGTTTATGAAATGA+GGG | - | chr3_1:20601978-20601997 | Msa0352220:CDS | 20.0% |
!!! | TGTTGATTTTGATAACAATT+TGG | - | chr3_1:20601030-20601049 | Msa0352220:CDS | 20.0% |
!! | TATGAAATAATTCAACAAGA+TGG | + | chr3_1:20601060-20601079 | None:intergenic | 20.0% |
!!! | TTTTTTTGAGGAAATAAACA+AGG | - | chr3_1:20601246-20601265 | Msa0352220:CDS | 20.0% |
!! | AGAATTATGTTTATGAAATG+AGG | - | chr3_1:20601977-20601996 | Msa0352220:CDS | 20.0% |
!! | GAATTATGTTTATGAAATGA+GGG | - | chr3_1:20601978-20601997 | Msa0352220:CDS | 20.0% |
! | ACCTATTAATCTTTCAGTAT+CGG | + | chr3_1:20600462-20600481 | None:intergenic | 25.0% |
! | TTGTAATTGACAACAATCAT+GGG | + | chr3_1:20600632-20600651 | None:intergenic | 25.0% |
! | TTTGTAATTGACAACAATCA+TGG | + | chr3_1:20600633-20600652 | None:intergenic | 25.0% |
! | ATGATTGTTGTCAATTACAA+AGG | - | chr3_1:20600632-20600651 | Msa0352220:CDS | 25.0% |
! | GAAATTGCTGAAACTTATTT+GGG | - | chr3_1:20600713-20600732 | Msa0352220:CDS | 25.0% |
!! | ATTTCATAGAAAGTACAAGA+AGG | - | chr3_1:20601072-20601091 | Msa0352220:CDS | 25.0% |
! | CAATAACAAATTCATGAACT+TGG | + | chr3_1:20601336-20601355 | None:intergenic | 25.0% |
!!! | GTTCATGAATTTGTTATTGT+CGG | - | chr3_1:20601337-20601356 | Msa0352220:CDS | 25.0% |
!!! | AAACATTCTCCTTTTTTGTA+GGG | + | chr3_1:20601621-20601640 | None:intergenic | 25.0% |
!!! | AAAACATTCTCCTTTTTTGT+AGG | + | chr3_1:20601622-20601641 | None:intergenic | 25.0% |
! | TTTGATCAAAACTTTACCTT+GGG | + | chr3_1:20601653-20601672 | None:intergenic | 25.0% |
!!! | TGTTTTGATGTTGATGTTAA+TGG | - | chr3_1:20601778-20601797 | Msa0352220:CDS | 25.0% |
!! | TGTTGATGTTAATGGAATTT+TGG | - | chr3_1:20601786-20601805 | Msa0352220:CDS | 25.0% |
! | ACCTATTAATCTTTCAGTAT+CGG | + | chr3_1:20600462-20600481 | None:intergenic | 25.0% |
! | TTGTAATTGACAACAATCAT+GGG | + | chr3_1:20600632-20600651 | None:intergenic | 25.0% |
! | TTTGTAATTGACAACAATCA+TGG | + | chr3_1:20600633-20600652 | None:intergenic | 25.0% |
! | ATGATTGTTGTCAATTACAA+AGG | - | chr3_1:20600632-20600651 | Msa0352220:CDS | 25.0% |
! | GAAATTGCTGAAACTTATTT+GGG | - | chr3_1:20600713-20600732 | Msa0352220:CDS | 25.0% |
!! | ATTTCATAGAAAGTACAAGA+AGG | - | chr3_1:20601072-20601091 | Msa0352220:CDS | 25.0% |
! | CAATAACAAATTCATGAACT+TGG | + | chr3_1:20601336-20601355 | None:intergenic | 25.0% |
!!! | GTTCATGAATTTGTTATTGT+CGG | - | chr3_1:20601337-20601356 | Msa0352220:CDS | 25.0% |
!!! | AAACATTCTCCTTTTTTGTA+GGG | + | chr3_1:20601621-20601640 | None:intergenic | 25.0% |
!!! | AAAACATTCTCCTTTTTTGT+AGG | + | chr3_1:20601622-20601641 | None:intergenic | 25.0% |
! | TTTGATCAAAACTTTACCTT+GGG | + | chr3_1:20601653-20601672 | None:intergenic | 25.0% |
!!! | TGTTTTGATGTTGATGTTAA+TGG | - | chr3_1:20601778-20601797 | Msa0352220:CDS | 25.0% |
!! | TGTTGATGTTAATGGAATTT+TGG | - | chr3_1:20601786-20601805 | Msa0352220:CDS | 25.0% |
ACCGATACTGAAAGATTAAT+AGG | - | chr3_1:20600458-20600477 | Msa0352220:CDS | 30.0% | |
!!! | ATTTTTGGCTGATTGGTTTA+TGG | + | chr3_1:20600492-20600511 | None:intergenic | 30.0% |
! | GAGGTGAAAAATGTTTTTCT+TGG | + | chr3_1:20600658-20600677 | None:intergenic | 30.0% |
! | CTTTAATTTAGACAACACCA+TGG | + | chr3_1:20600693-20600712 | None:intergenic | 30.0% |
!! | CATGGTGTTGTCTAAATTAA+AGG | - | chr3_1:20600691-20600710 | Msa0352220:CDS | 30.0% |
GGAAATTGCTGAAACTTATT+TGG | - | chr3_1:20600712-20600731 | Msa0352220:CDS | 30.0% | |
AATGTTCTTGTCTTTGATCT+TGG | - | chr3_1:20600920-20600939 | Msa0352220:CDS | 30.0% | |
!!! | TGTTACTAGAGCTTTTTTTG+AGG | - | chr3_1:20601234-20601253 | Msa0352220:CDS | 30.0% |
!! | ATGAATTTGTTATTGTCGGA+GGG | - | chr3_1:20601341-20601360 | Msa0352220:CDS | 30.0% |
TTCAGTAGTTGTTGAATCTT+CGG | + | chr3_1:20601379-20601398 | None:intergenic | 30.0% | |
AAGGAAATGTTTAGTGTCAA+CGG | - | chr3_1:20601397-20601416 | Msa0352220:CDS | 30.0% | |
!! | TTTTGATTCCGAAGAATACT+AGG | - | chr3_1:20601593-20601612 | Msa0352220:CDS | 30.0% |
CTTTGATCAAAACTTTACCT+TGG | + | chr3_1:20601654-20601673 | None:intergenic | 30.0% | |
!! | GTTTTGATCAAAGTCTATGA+AGG | - | chr3_1:20601661-20601680 | Msa0352220:CDS | 30.0% |
! | TTGATATTTGGAACCTTTCT+AGG | + | chr3_1:20601754-20601773 | None:intergenic | 30.0% |
! | TGATGTTAATGGAATTTTGG+AGG | - | chr3_1:20601789-20601808 | Msa0352220:CDS | 30.0% |
ACCGATACTGAAAGATTAAT+AGG | - | chr3_1:20600458-20600477 | Msa0352220:CDS | 30.0% | |
!!! | ATTTTTGGCTGATTGGTTTA+TGG | + | chr3_1:20600492-20600511 | None:intergenic | 30.0% |
! | GAGGTGAAAAATGTTTTTCT+TGG | + | chr3_1:20600658-20600677 | None:intergenic | 30.0% |
! | CTTTAATTTAGACAACACCA+TGG | + | chr3_1:20600693-20600712 | None:intergenic | 30.0% |
!! | CATGGTGTTGTCTAAATTAA+AGG | - | chr3_1:20600691-20600710 | Msa0352220:CDS | 30.0% |
GGAAATTGCTGAAACTTATT+TGG | - | chr3_1:20600712-20600731 | Msa0352220:CDS | 30.0% | |
AATGTTCTTGTCTTTGATCT+TGG | - | chr3_1:20600920-20600939 | Msa0352220:CDS | 30.0% | |
!!! | TGTTACTAGAGCTTTTTTTG+AGG | - | chr3_1:20601234-20601253 | Msa0352220:CDS | 30.0% |
!! | ATGAATTTGTTATTGTCGGA+GGG | - | chr3_1:20601341-20601360 | Msa0352220:CDS | 30.0% |
TTCAGTAGTTGTTGAATCTT+CGG | + | chr3_1:20601379-20601398 | None:intergenic | 30.0% | |
AAGGAAATGTTTAGTGTCAA+CGG | - | chr3_1:20601397-20601416 | Msa0352220:CDS | 30.0% | |
!! | TTTTGATTCCGAAGAATACT+AGG | - | chr3_1:20601593-20601612 | Msa0352220:CDS | 30.0% |
CTTTGATCAAAACTTTACCT+TGG | + | chr3_1:20601654-20601673 | None:intergenic | 30.0% | |
!! | GTTTTGATCAAAGTCTATGA+AGG | - | chr3_1:20601661-20601680 | Msa0352220:CDS | 30.0% |
! | TTGATATTTGGAACCTTTCT+AGG | + | chr3_1:20601754-20601773 | None:intergenic | 30.0% |
! | TGATGTTAATGGAATTTTGG+AGG | - | chr3_1:20601789-20601808 | Msa0352220:CDS | 30.0% |
ACAAGAAAAAGCAAAGCCAT+AGG | - | chr3_1:20600326-20600345 | Msa0352220:CDS | 35.0% | |
!! | TAATCTTTCAGTATCGGTGA+AGG | + | chr3_1:20600456-20600475 | None:intergenic | 35.0% |
CAAACGTTTGGCATCAAAAA+CGG | + | chr3_1:20600525-20600544 | None:intergenic | 35.0% | |
TTTGATGCCAAACGTTTGAT+TGG | - | chr3_1:20600527-20600546 | Msa0352220:CDS | 35.0% | |
! | TTATGTCTTGTTGGACTGAT+TGG | + | chr3_1:20600568-20600587 | None:intergenic | 35.0% |
AATCAGTCCAACAAGACATA+AGG | - | chr3_1:20600567-20600586 | Msa0352220:CDS | 35.0% | |
! | TCCAACAAGACATAAGGTTT+TGG | - | chr3_1:20600573-20600592 | Msa0352220:CDS | 35.0% |
!! | CATAAGGTTTTGGCCTTTTA+AGG | - | chr3_1:20600583-20600602 | Msa0352220:CDS | 35.0% |
! | TGGTTTGGAACAACCTTAAA+AGG | + | chr3_1:20600599-20600618 | None:intergenic | 35.0% |
AAAGATGCAGGAAAAATTGC+CGG | - | chr3_1:20600809-20600828 | Msa0352220:CDS | 35.0% | |
GATCCTCATCACATTAAAAC+CGG | + | chr3_1:20600831-20600850 | None:intergenic | 35.0% | |
! | ATGGTTTGGACAAGAAAATG+TGG | - | chr3_1:20600882-20600901 | Msa0352220:CDS | 35.0% |
! | ACTTTGGGAGATACTCATTT+GGG | - | chr3_1:20601004-20601023 | Msa0352220:CDS | 35.0% |
AGTGAGAATTCCAAAGCTTT+GGG | - | chr3_1:20601106-20601125 | Msa0352220:CDS | 35.0% | |
AGCTTGATTCACTATGTGAA+GGG | - | chr3_1:20601194-20601213 | Msa0352220:CDS | 35.0% | |
!! | CATGAATTTGTTATTGTCGG+AGG | - | chr3_1:20601340-20601359 | Msa0352220:CDS | 35.0% |
GAAGATTCAACAACTACTGA+AGG | - | chr3_1:20601378-20601397 | Msa0352220:CDS | 35.0% | |
! | TCAGGATTAATGCTTTTGCA+AGG | + | chr3_1:20601436-20601455 | None:intergenic | 35.0% |
GCAGCAATATTGAATACTGA+AGG | - | chr3_1:20601487-20601506 | Msa0352220:CDS | 35.0% | |
! | GATGTTATGCCTTTTAGTCT+TGG | - | chr3_1:20601541-20601560 | Msa0352220:CDS | 35.0% |
GTTTCAACACCAAGACTAAA+AGG | + | chr3_1:20601553-20601572 | None:intergenic | 35.0% | |
!! | AGTCTTGGTGTTGAAACTAA+AGG | - | chr3_1:20601556-20601575 | Msa0352220:CDS | 35.0% |
TACTAGGATCCCTACAAAAA+AGG | - | chr3_1:20601609-20601628 | Msa0352220:CDS | 35.0% | |
! | ACTAAGGACAACTTTTTGCT+TGG | - | chr3_1:20601697-20601716 | Msa0352220:CDS | 35.0% |
ATGCTCTTTAGTACCTAGAA+AGG | - | chr3_1:20601738-20601757 | Msa0352220:CDS | 35.0% | |
ACTGCTGAAGATAAGACAAA+AGG | - | chr3_1:20601814-20601833 | Msa0352220:CDS | 35.0% | |
CTGCTGAAGATAAGACAAAA+GGG | - | chr3_1:20601815-20601834 | Msa0352220:CDS | 35.0% | |
GAAGATCATTATCACCAACA+AGG | - | chr3_1:20601846-20601865 | Msa0352220:CDS | 35.0% | |
ATCATTATCACCAACAAGGA+GGG | - | chr3_1:20601850-20601869 | Msa0352220:CDS | 35.0% | |
ATCATTCTTCTCATCTCTTG+AGG | + | chr3_1:20601886-20601905 | None:intergenic | 35.0% | |
AAGAGATGAGAAGAATGATG+AGG | - | chr3_1:20601887-20601906 | Msa0352220:CDS | 35.0% | |
AGAGATGAGAAGAATGATGA+GGG | - | chr3_1:20601888-20601907 | Msa0352220:CDS | 35.0% | |
! | TAGTGGAGGAAAGTATAGAA+TGG | - | chr3_1:20602025-20602044 | Msa0352220:CDS | 35.0% |
ACTCATCAATTTCTGCCAAT+TGG | + | chr3_1:20602062-20602081 | None:intergenic | 35.0% | |
TGAGTTTGAATTCAAGAAGC+AGG | - | chr3_1:20602077-20602096 | Msa0352220:CDS | 35.0% | |
ACAAGAAAAAGCAAAGCCAT+AGG | - | chr3_1:20600326-20600345 | Msa0352220:CDS | 35.0% | |
!! | TAATCTTTCAGTATCGGTGA+AGG | + | chr3_1:20600456-20600475 | None:intergenic | 35.0% |
CAAACGTTTGGCATCAAAAA+CGG | + | chr3_1:20600525-20600544 | None:intergenic | 35.0% | |
TTTGATGCCAAACGTTTGAT+TGG | - | chr3_1:20600527-20600546 | Msa0352220:CDS | 35.0% | |
! | TTATGTCTTGTTGGACTGAT+TGG | + | chr3_1:20600568-20600587 | None:intergenic | 35.0% |
AATCAGTCCAACAAGACATA+AGG | - | chr3_1:20600567-20600586 | Msa0352220:CDS | 35.0% | |
! | TCCAACAAGACATAAGGTTT+TGG | - | chr3_1:20600573-20600592 | Msa0352220:CDS | 35.0% |
!! | CATAAGGTTTTGGCCTTTTA+AGG | - | chr3_1:20600583-20600602 | Msa0352220:CDS | 35.0% |
! | TGGTTTGGAACAACCTTAAA+AGG | + | chr3_1:20600599-20600618 | None:intergenic | 35.0% |
AAAGATGCAGGAAAAATTGC+CGG | - | chr3_1:20600809-20600828 | Msa0352220:CDS | 35.0% | |
GATCCTCATCACATTAAAAC+CGG | + | chr3_1:20600831-20600850 | None:intergenic | 35.0% | |
! | ATGGTTTGGACAAGAAAATG+TGG | - | chr3_1:20600882-20600901 | Msa0352220:CDS | 35.0% |
! | ACTTTGGGAGATACTCATTT+GGG | - | chr3_1:20601004-20601023 | Msa0352220:CDS | 35.0% |
AGTGAGAATTCCAAAGCTTT+GGG | - | chr3_1:20601106-20601125 | Msa0352220:CDS | 35.0% | |
AGCTTGATTCACTATGTGAA+GGG | - | chr3_1:20601194-20601213 | Msa0352220:CDS | 35.0% | |
!! | CATGAATTTGTTATTGTCGG+AGG | - | chr3_1:20601340-20601359 | Msa0352220:CDS | 35.0% |
GAAGATTCAACAACTACTGA+AGG | - | chr3_1:20601378-20601397 | Msa0352220:CDS | 35.0% | |
! | TCAGGATTAATGCTTTTGCA+AGG | + | chr3_1:20601436-20601455 | None:intergenic | 35.0% |
GCAGCAATATTGAATACTGA+AGG | - | chr3_1:20601487-20601506 | Msa0352220:CDS | 35.0% | |
! | GATGTTATGCCTTTTAGTCT+TGG | - | chr3_1:20601541-20601560 | Msa0352220:CDS | 35.0% |
GTTTCAACACCAAGACTAAA+AGG | + | chr3_1:20601553-20601572 | None:intergenic | 35.0% | |
!! | AGTCTTGGTGTTGAAACTAA+AGG | - | chr3_1:20601556-20601575 | Msa0352220:CDS | 35.0% |
TACTAGGATCCCTACAAAAA+AGG | - | chr3_1:20601609-20601628 | Msa0352220:CDS | 35.0% | |
! | ACTAAGGACAACTTTTTGCT+TGG | - | chr3_1:20601697-20601716 | Msa0352220:CDS | 35.0% |
ATGCTCTTTAGTACCTAGAA+AGG | - | chr3_1:20601738-20601757 | Msa0352220:CDS | 35.0% | |
ACTGCTGAAGATAAGACAAA+AGG | - | chr3_1:20601814-20601833 | Msa0352220:CDS | 35.0% | |
CTGCTGAAGATAAGACAAAA+GGG | - | chr3_1:20601815-20601834 | Msa0352220:CDS | 35.0% | |
GAAGATCATTATCACCAACA+AGG | - | chr3_1:20601846-20601865 | Msa0352220:CDS | 35.0% | |
ATCATTATCACCAACAAGGA+GGG | - | chr3_1:20601850-20601869 | Msa0352220:CDS | 35.0% | |
ATCATTCTTCTCATCTCTTG+AGG | + | chr3_1:20601886-20601905 | None:intergenic | 35.0% | |
AAGAGATGAGAAGAATGATG+AGG | - | chr3_1:20601887-20601906 | Msa0352220:CDS | 35.0% | |
AGAGATGAGAAGAATGATGA+GGG | - | chr3_1:20601888-20601907 | Msa0352220:CDS | 35.0% | |
! | TAGTGGAGGAAAGTATAGAA+TGG | - | chr3_1:20602025-20602044 | Msa0352220:CDS | 35.0% |
ACTCATCAATTTCTGCCAAT+TGG | + | chr3_1:20602062-20602081 | None:intergenic | 35.0% | |
TGAGTTTGAATTCAAGAAGC+AGG | - | chr3_1:20602077-20602096 | Msa0352220:CDS | 35.0% | |
AGATCATTCCAAACGACCAA+GGG | - | chr3_1:20600405-20600424 | Msa0352220:CDS | 40.0% | |
!!! | TGTGTGGATTTTTGGCTGAT+TGG | + | chr3_1:20600499-20600518 | None:intergenic | 40.0% |
!!! | AACGGTGTTGTGTGGATTTT+TGG | + | chr3_1:20600507-20600526 | None:intergenic | 40.0% |
GCCAAAACCTTATGTCTTGT+TGG | + | chr3_1:20600577-20600596 | None:intergenic | 40.0% | |
ATGGGTTTGTCTTTGTGGTT+TGG | + | chr3_1:20600614-20600633 | None:intergenic | 40.0% | |
CAATCATGGGTTTGTCTTTG+TGG | + | chr3_1:20600619-20600638 | None:intergenic | 40.0% | |
ACCTCAAGAGATATCTTCCA+TGG | - | chr3_1:20600673-20600692 | Msa0352220:CDS | 40.0% | |
ACCATGGAAGATATCTCTTG+AGG | + | chr3_1:20600677-20600696 | None:intergenic | 40.0% | |
TGTGAGTTGTTGAAGTAAGC+AGG | + | chr3_1:20600776-20600795 | None:intergenic | 40.0% | |
AGACAAGCTACAAAAGATGC+AGG | - | chr3_1:20600797-20600816 | Msa0352220:CDS | 40.0% | |
!!! | TTGCCGGTTTTAATGTGATG+AGG | - | chr3_1:20600825-20600844 | Msa0352220:CDS | 40.0% |
AGCTGCTATTGCTTATGGTT+TGG | - | chr3_1:20600868-20600887 | Msa0352220:CDS | 40.0% | |
GACAAGAAAATGTGGAGAGA+AGG | - | chr3_1:20600890-20600909 | Msa0352220:CDS | 40.0% | |
GTTCTTGTCTTTGATCTTGG+TGG | - | chr3_1:20600923-20600942 | Msa0352220:CDS | 40.0% | |
CAAATGAGTATCTCCCAAAG+TGG | + | chr3_1:20601005-20601024 | None:intergenic | 40.0% | |
! | CACTTTGGGAGATACTCATT+TGG | - | chr3_1:20601003-20601022 | Msa0352220:CDS | 40.0% |
CAGTGAGAATTCCAAAGCTT+TGG | - | chr3_1:20601105-20601124 | Msa0352220:CDS | 40.0% | |
GTGAGAATTCCAAAGCTTTG+GGG | - | chr3_1:20601107-20601126 | Msa0352220:CDS | 40.0% | |
GAGCTTGATTCACTATGTGA+AGG | - | chr3_1:20601193-20601212 | Msa0352220:CDS | 40.0% | |
!! | TGTGGAGAAGTGTTTGATTG+AGG | - | chr3_1:20601294-20601313 | Msa0352220:CDS | 40.0% |
CATTAATCCTGATGAAGCTG+TGG | - | chr3_1:20601444-20601463 | Msa0352220:CDS | 40.0% | |
GAAGGAGACAAGAAGATTGA+AGG | - | chr3_1:20601505-20601524 | Msa0352220:CDS | 40.0% | |
GATTGAAGGCTTATTGCTGT+TGG | - | chr3_1:20601519-20601538 | Msa0352220:CDS | 40.0% | |
!! | CTTGGTGTTGAAACTAAAGG+TGG | - | chr3_1:20601559-20601578 | Msa0352220:CDS | 40.0% |
GTAGGGATCCTAGTATTCTT+CGG | + | chr3_1:20601604-20601623 | None:intergenic | 40.0% | |
AGGAGAACATGCTAAGACTA+AGG | - | chr3_1:20601681-20601700 | Msa0352220:CDS | 40.0% | |
GATCATTATCACCAACAAGG+AGG | - | chr3_1:20601849-20601868 | Msa0352220:CDS | 40.0% | |
ATGGCTTGACAGAAACCAAT+TGG | - | chr3_1:20602044-20602063 | Msa0352220:CDS | 40.0% | |
TGAATTCAAGAAGCAGGAGT+TGG | - | chr3_1:20602083-20602102 | Msa0352220:CDS | 40.0% | |
AGAAGCAGGAGTTGGAAAAT+AGG | - | chr3_1:20602091-20602110 | Msa0352220:CDS | 40.0% | |
GAAGCAGGAGTTGGAAAATA+GGG | - | chr3_1:20602092-20602111 | Msa0352220:CDS | 40.0% | |
AGATCATTCCAAACGACCAA+GGG | - | chr3_1:20600405-20600424 | Msa0352220:CDS | 40.0% | |
!!! | TGTGTGGATTTTTGGCTGAT+TGG | + | chr3_1:20600499-20600518 | None:intergenic | 40.0% |
!!! | AACGGTGTTGTGTGGATTTT+TGG | + | chr3_1:20600507-20600526 | None:intergenic | 40.0% |
GCCAAAACCTTATGTCTTGT+TGG | + | chr3_1:20600577-20600596 | None:intergenic | 40.0% | |
ATGGGTTTGTCTTTGTGGTT+TGG | + | chr3_1:20600614-20600633 | None:intergenic | 40.0% | |
CAATCATGGGTTTGTCTTTG+TGG | + | chr3_1:20600619-20600638 | None:intergenic | 40.0% | |
ACCTCAAGAGATATCTTCCA+TGG | - | chr3_1:20600673-20600692 | Msa0352220:CDS | 40.0% | |
ACCATGGAAGATATCTCTTG+AGG | + | chr3_1:20600677-20600696 | None:intergenic | 40.0% | |
TGTGAGTTGTTGAAGTAAGC+AGG | + | chr3_1:20600776-20600795 | None:intergenic | 40.0% | |
AGACAAGCTACAAAAGATGC+AGG | - | chr3_1:20600797-20600816 | Msa0352220:CDS | 40.0% | |
!!! | TTGCCGGTTTTAATGTGATG+AGG | - | chr3_1:20600825-20600844 | Msa0352220:CDS | 40.0% |
AGCTGCTATTGCTTATGGTT+TGG | - | chr3_1:20600868-20600887 | Msa0352220:CDS | 40.0% | |
GACAAGAAAATGTGGAGAGA+AGG | - | chr3_1:20600890-20600909 | Msa0352220:CDS | 40.0% | |
GTTCTTGTCTTTGATCTTGG+TGG | - | chr3_1:20600923-20600942 | Msa0352220:CDS | 40.0% | |
CAAATGAGTATCTCCCAAAG+TGG | + | chr3_1:20601005-20601024 | None:intergenic | 40.0% | |
! | CACTTTGGGAGATACTCATT+TGG | - | chr3_1:20601003-20601022 | Msa0352220:CDS | 40.0% |
CAGTGAGAATTCCAAAGCTT+TGG | - | chr3_1:20601105-20601124 | Msa0352220:CDS | 40.0% | |
GTGAGAATTCCAAAGCTTTG+GGG | - | chr3_1:20601107-20601126 | Msa0352220:CDS | 40.0% | |
GAGCTTGATTCACTATGTGA+AGG | - | chr3_1:20601193-20601212 | Msa0352220:CDS | 40.0% | |
!! | TGTGGAGAAGTGTTTGATTG+AGG | - | chr3_1:20601294-20601313 | Msa0352220:CDS | 40.0% |
CATTAATCCTGATGAAGCTG+TGG | - | chr3_1:20601444-20601463 | Msa0352220:CDS | 40.0% | |
GAAGGAGACAAGAAGATTGA+AGG | - | chr3_1:20601505-20601524 | Msa0352220:CDS | 40.0% | |
GATTGAAGGCTTATTGCTGT+TGG | - | chr3_1:20601519-20601538 | Msa0352220:CDS | 40.0% | |
!! | CTTGGTGTTGAAACTAAAGG+TGG | - | chr3_1:20601559-20601578 | Msa0352220:CDS | 40.0% |
GTAGGGATCCTAGTATTCTT+CGG | + | chr3_1:20601604-20601623 | None:intergenic | 40.0% | |
AGGAGAACATGCTAAGACTA+AGG | - | chr3_1:20601681-20601700 | Msa0352220:CDS | 40.0% | |
GATCATTATCACCAACAAGG+AGG | - | chr3_1:20601849-20601868 | Msa0352220:CDS | 40.0% | |
ATGGCTTGACAGAAACCAAT+TGG | - | chr3_1:20602044-20602063 | Msa0352220:CDS | 40.0% | |
TGAATTCAAGAAGCAGGAGT+TGG | - | chr3_1:20602083-20602102 | Msa0352220:CDS | 40.0% | |
AGAAGCAGGAGTTGGAAAAT+AGG | - | chr3_1:20602091-20602110 | Msa0352220:CDS | 40.0% | |
GAAGCAGGAGTTGGAAAATA+GGG | - | chr3_1:20602092-20602111 | Msa0352220:CDS | 40.0% | |
!! | AAAGCCATAGGCATTGACCT+TGG | - | chr3_1:20600338-20600357 | Msa0352220:CDS | 45.0% |
TGTACCAAGGTCAATGCCTA+TGG | + | chr3_1:20600345-20600364 | None:intergenic | 45.0% | |
! | TACAGCTGTAGCTTGTACCA+AGG | + | chr3_1:20600358-20600377 | None:intergenic | 45.0% |
GAGATCATTCCAAACGACCA+AGG | - | chr3_1:20600404-20600423 | Msa0352220:CDS | 45.0% | |
!! | GCATCAAAAACGGTGTTGTG+TGG | + | chr3_1:20600515-20600534 | None:intergenic | 45.0% |
GCGATGACCAATCAAACGTT+TGG | + | chr3_1:20600537-20600556 | None:intergenic | 45.0% | |
TAAGCAATAGCAGCTGCAGT+AGG | + | chr3_1:20600863-20600882 | None:intergenic | 45.0% | |
ACTGCAGCTGCTATTGCTTA+TGG | - | chr3_1:20600863-20600882 | Msa0352220:CDS | 45.0% | |
CTTGTCTTTGATCTTGGTGG+TGG | - | chr3_1:20600926-20600945 | Msa0352220:CDS | 45.0% | |
TCCTTAGTGACTGTTGACGA+AGG | - | chr3_1:20600962-20600981 | Msa0352220:CDS | 45.0% | |
TCCTTCGTCAACAGTCACTA+AGG | + | chr3_1:20600966-20600985 | None:intergenic | 45.0% | |
TGTTGACGAAGGAATGTTCC+AGG | - | chr3_1:20600973-20600992 | Msa0352220:CDS | 45.0% | |
CGAAGGAATGTTCCAGGTTA+AGG | - | chr3_1:20600979-20600998 | Msa0352220:CDS | 45.0% | |
! | TTCCAGGTTAAGGCCACTTT+GGG | - | chr3_1:20600989-20601008 | Msa0352220:CDS | 45.0% |
TTGGGAGATACTCATTTGGG+TGG | - | chr3_1:20601007-20601026 | Msa0352220:CDS | 45.0% | |
!! | AGAATTCCAAAGCTTTGGGG+AGG | - | chr3_1:20601110-20601129 | Msa0352220:CDS | 45.0% |
TCTTAACCTCCCCAAAGCTT+TGG | + | chr3_1:20601119-20601138 | None:intergenic | 45.0% | |
! | CAGAAAGTGCATGAAGACTG+TGG | - | chr3_1:20601276-20601295 | Msa0352220:CDS | 45.0% |
! | AATGTTTTCTCCACAGCCCA+AGG | - | chr3_1:20601634-20601653 | Msa0352220:CDS | 45.0% |
CAAAACTTTACCTTGGGCTG+TGG | + | chr3_1:20601647-20601666 | None:intergenic | 45.0% | |
TTATCACCAACAAGGAGGGA+AGG | - | chr3_1:20601854-20601873 | Msa0352220:CDS | 45.0% | |
ATGAAATGAGGGAGAGAGTG+AGG | - | chr3_1:20601989-20602008 | Msa0352220:CDS | 45.0% | |
GAGAGTGAGGAAGCTTGAAA+AGG | - | chr3_1:20602002-20602021 | Msa0352220:CDS | 45.0% | |
GAGGAAGCTTGAAAAGGTAG+TGG | - | chr3_1:20602008-20602027 | Msa0352220:CDS | 45.0% | |
! | GAAGCTTGAAAAGGTAGTGG+AGG | - | chr3_1:20602011-20602030 | Msa0352220:CDS | 45.0% |
!! | AAAGCCATAGGCATTGACCT+TGG | - | chr3_1:20600338-20600357 | Msa0352220:CDS | 45.0% |
TGTACCAAGGTCAATGCCTA+TGG | + | chr3_1:20600345-20600364 | None:intergenic | 45.0% | |
! | TACAGCTGTAGCTTGTACCA+AGG | + | chr3_1:20600358-20600377 | None:intergenic | 45.0% |
GAGATCATTCCAAACGACCA+AGG | - | chr3_1:20600404-20600423 | Msa0352220:CDS | 45.0% | |
!! | GCATCAAAAACGGTGTTGTG+TGG | + | chr3_1:20600515-20600534 | None:intergenic | 45.0% |
GCGATGACCAATCAAACGTT+TGG | + | chr3_1:20600537-20600556 | None:intergenic | 45.0% | |
TAAGCAATAGCAGCTGCAGT+AGG | + | chr3_1:20600863-20600882 | None:intergenic | 45.0% | |
ACTGCAGCTGCTATTGCTTA+TGG | - | chr3_1:20600863-20600882 | Msa0352220:CDS | 45.0% | |
CTTGTCTTTGATCTTGGTGG+TGG | - | chr3_1:20600926-20600945 | Msa0352220:CDS | 45.0% | |
TCCTTAGTGACTGTTGACGA+AGG | - | chr3_1:20600962-20600981 | Msa0352220:CDS | 45.0% | |
TCCTTCGTCAACAGTCACTA+AGG | + | chr3_1:20600966-20600985 | None:intergenic | 45.0% | |
TGTTGACGAAGGAATGTTCC+AGG | - | chr3_1:20600973-20600992 | Msa0352220:CDS | 45.0% | |
CGAAGGAATGTTCCAGGTTA+AGG | - | chr3_1:20600979-20600998 | Msa0352220:CDS | 45.0% | |
! | TTCCAGGTTAAGGCCACTTT+GGG | - | chr3_1:20600989-20601008 | Msa0352220:CDS | 45.0% |
TTGGGAGATACTCATTTGGG+TGG | - | chr3_1:20601007-20601026 | Msa0352220:CDS | 45.0% | |
!! | AGAATTCCAAAGCTTTGGGG+AGG | - | chr3_1:20601110-20601129 | Msa0352220:CDS | 45.0% |
TCTTAACCTCCCCAAAGCTT+TGG | + | chr3_1:20601119-20601138 | None:intergenic | 45.0% | |
! | CAGAAAGTGCATGAAGACTG+TGG | - | chr3_1:20601276-20601295 | Msa0352220:CDS | 45.0% |
! | AATGTTTTCTCCACAGCCCA+AGG | - | chr3_1:20601634-20601653 | Msa0352220:CDS | 45.0% |
CAAAACTTTACCTTGGGCTG+TGG | + | chr3_1:20601647-20601666 | None:intergenic | 45.0% | |
TTATCACCAACAAGGAGGGA+AGG | - | chr3_1:20601854-20601873 | Msa0352220:CDS | 45.0% | |
ATGAAATGAGGGAGAGAGTG+AGG | - | chr3_1:20601989-20602008 | Msa0352220:CDS | 45.0% | |
GAGAGTGAGGAAGCTTGAAA+AGG | - | chr3_1:20602002-20602021 | Msa0352220:CDS | 45.0% | |
GAGGAAGCTTGAAAAGGTAG+TGG | - | chr3_1:20602008-20602027 | Msa0352220:CDS | 45.0% | |
! | GAAGCTTGAAAAGGTAGTGG+AGG | - | chr3_1:20602011-20602030 | Msa0352220:CDS | 45.0% |
GCTACAGCTGTATTGCAGTG+TGG | - | chr3_1:20600366-20600385 | Msa0352220:CDS | 50.0% | |
CAACGTAAGAAGGGGTGACA+CGG | + | chr3_1:20600433-20600452 | None:intergenic | 50.0% | |
GGTGAAGGCAACGTAAGAAG+GGG | + | chr3_1:20600441-20600460 | None:intergenic | 50.0% | |
CGGTGAAGGCAACGTAAGAA+GGG | + | chr3_1:20600442-20600461 | None:intergenic | 50.0% | |
TCGGTGAAGGCAACGTAAGA+AGG | + | chr3_1:20600443-20600462 | None:intergenic | 50.0% | |
GTTCCAGGTTAAGGCCACTT+TGG | - | chr3_1:20600988-20601007 | Msa0352220:CDS | 50.0% | |
CAGCATGCGAGAAAGCAAAG+AGG | - | chr3_1:20601140-20601159 | Msa0352220:CDS | 50.0% | |
CCATAAGCCACAGCTTCATC+AGG | + | chr3_1:20601454-20601473 | None:intergenic | 50.0% | |
CCTGATGAAGCTGTGGCTTA+TGG | - | chr3_1:20601451-20601470 | Msa0352220:CDS | 50.0% | |
ACTCAACCTTCCCTCCTTGT+TGG | + | chr3_1:20601863-20601882 | None:intergenic | 50.0% | |
ATCCTCTGCCTTATACCGCT+CGG | + | chr3_1:20601917-20601936 | None:intergenic | 50.0% | |
GTATAAGGCAGAGGATGAGG+AGG | - | chr3_1:20601921-20601940 | Msa0352220:CDS | 50.0% | |
GGATGAGGAGGTTAGGAAGA+AGG | - | chr3_1:20601933-20601952 | Msa0352220:CDS | 50.0% | |
GCTACAGCTGTATTGCAGTG+TGG | - | chr3_1:20600366-20600385 | Msa0352220:CDS | 50.0% | |
CAACGTAAGAAGGGGTGACA+CGG | + | chr3_1:20600433-20600452 | None:intergenic | 50.0% | |
GGTGAAGGCAACGTAAGAAG+GGG | + | chr3_1:20600441-20600460 | None:intergenic | 50.0% | |
CGGTGAAGGCAACGTAAGAA+GGG | + | chr3_1:20600442-20600461 | None:intergenic | 50.0% | |
TCGGTGAAGGCAACGTAAGA+AGG | + | chr3_1:20600443-20600462 | None:intergenic | 50.0% | |
GTTCCAGGTTAAGGCCACTT+TGG | - | chr3_1:20600988-20601007 | Msa0352220:CDS | 50.0% | |
CAGCATGCGAGAAAGCAAAG+AGG | - | chr3_1:20601140-20601159 | Msa0352220:CDS | 50.0% | |
CCATAAGCCACAGCTTCATC+AGG | + | chr3_1:20601454-20601473 | None:intergenic | 50.0% | |
CCTGATGAAGCTGTGGCTTA+TGG | - | chr3_1:20601451-20601470 | Msa0352220:CDS | 50.0% | |
ACTCAACCTTCCCTCCTTGT+TGG | + | chr3_1:20601863-20601882 | None:intergenic | 50.0% | |
ATCCTCTGCCTTATACCGCT+CGG | + | chr3_1:20601917-20601936 | None:intergenic | 50.0% | |
GTATAAGGCAGAGGATGAGG+AGG | - | chr3_1:20601921-20601940 | Msa0352220:CDS | 50.0% | |
GGATGAGGAGGTTAGGAAGA+AGG | - | chr3_1:20601933-20601952 | Msa0352220:CDS | 50.0% | |
ACACGGTTCCCTTGGTCGTT+TGG | + | chr3_1:20600416-20600435 | None:intergenic | 55.0% | |
! | CTCCCAAAGTGGCCTTAACC+TGG | + | chr3_1:20600994-20601013 | None:intergenic | 55.0% |
GAATGATGAGGGATGCCGAG+CGG | - | chr3_1:20601899-20601918 | Msa0352220:CDS | 55.0% | |
GCGGTATAAGGCAGAGGATG+AGG | - | chr3_1:20601918-20601937 | Msa0352220:CDS | 55.0% | |
AGGCAGAGGATGAGGAGGTT+AGG | - | chr3_1:20601926-20601945 | Msa0352220:CDS | 55.0% | |
ACACGGTTCCCTTGGTCGTT+TGG | + | chr3_1:20600416-20600435 | None:intergenic | 55.0% | |
! | CTCCCAAAGTGGCCTTAACC+TGG | + | chr3_1:20600994-20601013 | None:intergenic | 55.0% |
GAATGATGAGGGATGCCGAG+CGG | - | chr3_1:20601899-20601918 | Msa0352220:CDS | 55.0% | |
GCGGTATAAGGCAGAGGATG+AGG | - | chr3_1:20601918-20601937 | Msa0352220:CDS | 55.0% | |
AGGCAGAGGATGAGGAGGTT+AGG | - | chr3_1:20601926-20601945 | Msa0352220:CDS | 55.0% | |
AAGGGGTGACACGGTTCCCT+TGG | + | chr3_1:20600424-20600443 | None:intergenic | 60.0% | |
GAGGGATGCCGAGCGGTATA+AGG | - | chr3_1:20601906-20601925 | Msa0352220:CDS | 60.0% | |
TGCCGAGCGGTATAAGGCAG+AGG | - | chr3_1:20601912-20601931 | Msa0352220:CDS | 60.0% | |
AAGGGGTGACACGGTTCCCT+TGG | + | chr3_1:20600424-20600443 | None:intergenic | 60.0% | |
GAGGGATGCCGAGCGGTATA+AGG | - | chr3_1:20601906-20601925 | Msa0352220:CDS | 60.0% | |
TGCCGAGCGGTATAAGGCAG+AGG | - | chr3_1:20601912-20601931 | Msa0352220:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_1 | gene | 20600320 | 20602128 | 20600320 | ID=Msa0352220;Name=Msa0352220 |
chr3_1 | mRNA | 20600320 | 20602128 | 20600320 | ID=Msa0352220-mRNA-1;Parent=Msa0352220;Name=Msa0352220-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|602 |
chr3_1 | exon | 20600320 | 20602128 | 20600320 | ID=Msa0352220-mRNA-1:exon:4723;Parent=Msa0352220-mRNA-1 |
chr3_1 | CDS | 20600320 | 20602128 | 20600320 | ID=Msa0352220-mRNA-1:cds;Parent=Msa0352220-mRNA-1 |
Gene Sequence |
Protein sequence |