Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0360660 | XP_003600064.1 | 94.960 | 754 | 32 | 1 | 1 | 754 | 1 | 748 | 0.0 | 1477 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0360660 | sp|Q9SAB1|HSP7Q_ARATH | 59.392 | 756 | 292 | 4 | 1 | 755 | 1 | 742 | 0.0 | 902 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0360660 | G7IXL4 | 94.960 | 754 | 32 | 1 | 1 | 754 | 1 | 748 | 0.0 | 1477 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0287410 | Msa0360660 | 0.801512 | 8.695075e-49 | -8.615850e-47 |
Msa0360660 | Msa0360720 | 0.964006 | 8.715414e-123 | -8.615850e-47 |
Msa0360660 | Msa0672690 | 0.802307 | 5.969491e-49 | -8.615850e-47 |
Msa0360660 | Msa0685900 | 0.804359 | 2.243233e-49 | -8.615850e-47 |
Msa0360660 | Msa0753720 | 0.824325 | 8.581211e-54 | -8.615850e-47 |
Msa0360660 | Msa0931520 | 0.803209 | 3.888513e-49 | -8.615850e-47 |
Msa0360660 | Msa1083840 | 0.808579 | 2.890363e-50 | -8.615850e-47 |
Msa0360660 | Msa1321350 | 0.800871 | 1.175846e-48 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0360660 | MtrunA17_Chr3g0098761 | 94.960 | 754 | 32 | 1 | 1 | 754 | 1 | 748 | 0.0 | 1477 |
Msa0360660 | MtrunA17_Chr5g0444001 | 71.062 | 546 | 145 | 3 | 1 | 539 | 1 | 540 | 0.0 | 785 |
Msa0360660 | MtrunA17_Chr2g0331901 | 50.253 | 792 | 346 | 7 | 1 | 750 | 1 | 786 | 0.0 | 769 |
Msa0360660 | MtrunA17_Chr4g0004331 | 49.427 | 785 | 351 | 9 | 1 | 744 | 1 | 780 | 0.0 | 738 |
Msa0360660 | MtrunA17_Chr3g0120101 | 27.525 | 792 | 486 | 21 | 2 | 720 | 25 | 801 | 1.56e-85 | 290 |
Msa0360660 | MtrunA17_Chr7g0223291 | 28.205 | 663 | 412 | 13 | 4 | 662 | 10 | 612 | 9.59e-76 | 258 |
Msa0360660 | MtrunA17_Chr4g0031301 | 28.186 | 667 | 413 | 14 | 4 | 665 | 10 | 615 | 4.81e-75 | 256 |
Msa0360660 | MtrunA17_Chr4g0073741 | 27.903 | 663 | 414 | 14 | 4 | 662 | 9 | 611 | 6.56e-75 | 256 |
Msa0360660 | MtrunA17_Chr7g0223181 | 27.903 | 663 | 414 | 13 | 4 | 662 | 10 | 612 | 1.78e-74 | 254 |
Msa0360660 | MtrunA17_Chr7g0262821 | 33.412 | 425 | 274 | 4 | 4 | 425 | 10 | 428 | 4.58e-74 | 253 |
Msa0360660 | MtrunA17_Chr4g0031321 | 27.736 | 667 | 416 | 14 | 4 | 665 | 10 | 615 | 1.15e-73 | 252 |
Msa0360660 | MtrunA17_Chr8g0388761 | 26.718 | 655 | 383 | 14 | 2 | 636 | 37 | 614 | 7.20e-71 | 245 |
Msa0360660 | MtrunA17_Chr6g0462601 | 32.553 | 427 | 279 | 4 | 4 | 427 | 10 | 430 | 2.73e-70 | 243 |
Msa0360660 | MtrunA17_Chr8g0388671 | 27.259 | 642 | 396 | 14 | 2 | 636 | 37 | 614 | 3.09e-70 | 243 |
Msa0360660 | MtrunA17_Chr6g0462771 | 31.628 | 430 | 280 | 5 | 4 | 425 | 10 | 433 | 4.31e-70 | 243 |
Msa0360660 | MtrunA17_Chr7g0248131 | 34.742 | 426 | 268 | 5 | 4 | 424 | 10 | 430 | 5.91e-70 | 242 |
Msa0360660 | MtrunA17_Chr7g0223701 | 32.944 | 428 | 277 | 5 | 4 | 427 | 10 | 431 | 1.42e-69 | 241 |
Msa0360660 | MtrunA17_Chr8g0350731 | 33.803 | 426 | 270 | 7 | 4 | 424 | 38 | 456 | 2.45e-69 | 241 |
Msa0360660 | MtrunA17_Chr7g0223711 | 32.706 | 425 | 276 | 5 | 4 | 424 | 10 | 428 | 1.19e-68 | 238 |
Msa0360660 | MtrunA17_Chr2g0279901 | 34.236 | 406 | 249 | 5 | 3 | 403 | 56 | 448 | 2.86e-68 | 238 |
Msa0360660 | MtrunA17_Chr7g0223751 | 32.235 | 425 | 278 | 5 | 4 | 424 | 10 | 428 | 2.06e-67 | 234 |
Msa0360660 | MtrunA17_Chr2g0296391 | 32.587 | 402 | 264 | 5 | 4 | 400 | 10 | 409 | 2.78e-67 | 232 |
Msa0360660 | MtrunA17_Chr7g0223031 | 32.471 | 425 | 277 | 5 | 4 | 424 | 10 | 428 | 3.67e-67 | 234 |
Msa0360660 | MtrunA17_Chr5g0427901 | 31.991 | 447 | 267 | 10 | 4 | 427 | 10 | 442 | 7.27e-67 | 233 |
Msa0360660 | MtrunA17_Chr2g0298851 | 32.000 | 425 | 280 | 5 | 4 | 424 | 10 | 429 | 8.56e-67 | 233 |
Msa0360660 | MtrunA17_Chr6g0462681 | 32.090 | 402 | 269 | 3 | 4 | 402 | 10 | 410 | 1.94e-66 | 233 |
Msa0360660 | MtrunA17_Chr6g0462711 | 30.754 | 504 | 317 | 10 | 4 | 489 | 11 | 500 | 3.01e-66 | 233 |
Msa0360660 | MtrunA17_Chr6g0462641 | 31.395 | 430 | 281 | 4 | 4 | 425 | 10 | 433 | 5.62e-66 | 232 |
Msa0360660 | MtrunA17_Chr2g0284681 | 30.858 | 431 | 283 | 5 | 4 | 425 | 9 | 433 | 5.75e-66 | 230 |
Msa0360660 | MtrunA17_Chr7g0223731 | 32.235 | 425 | 278 | 5 | 4 | 424 | 10 | 428 | 1.25e-65 | 229 |
Msa0360660 | MtrunA17_Chr4g0049501 | 33.005 | 406 | 255 | 5 | 3 | 403 | 53 | 446 | 1.37e-65 | 231 |
Msa0360660 | MtrunA17_Chr7g0221661 | 32.864 | 426 | 274 | 8 | 4 | 424 | 10 | 428 | 2.47e-65 | 229 |
Msa0360660 | MtrunA17_Chr2g0293581 | 32.319 | 427 | 275 | 7 | 4 | 424 | 11 | 429 | 3.27e-65 | 228 |
Msa0360660 | MtrunA17_Chr7g0233311 | 33.002 | 403 | 263 | 5 | 4 | 401 | 10 | 410 | 3.77e-65 | 228 |
Msa0360660 | MtrunA17_Chr7g0223781 | 32.944 | 428 | 269 | 6 | 4 | 424 | 10 | 426 | 7.33e-65 | 227 |
Msa0360660 | MtrunA17_Chr7g0225671 | 29.675 | 492 | 332 | 8 | 4 | 489 | 17 | 500 | 7.87e-65 | 228 |
Msa0360660 | MtrunA17_Chr2g0287631 | 31.603 | 443 | 291 | 7 | 4 | 441 | 10 | 445 | 2.49e-64 | 226 |
Msa0360660 | MtrunA17_Chr2g0298861 | 30.454 | 463 | 297 | 8 | 3 | 446 | 9 | 465 | 4.20e-64 | 226 |
Msa0360660 | MtrunA17_Chr4g0040931 | 30.986 | 426 | 282 | 7 | 4 | 424 | 10 | 428 | 3.73e-63 | 223 |
Msa0360660 | MtrunA17_Chr7g0223721 | 30.465 | 430 | 283 | 7 | 2 | 424 | 8 | 428 | 5.08e-63 | 222 |
Msa0360660 | MtrunA17_Chr7g0223851 | 32.000 | 425 | 280 | 5 | 4 | 424 | 19 | 438 | 1.23e-62 | 222 |
Msa0360660 | MtrunA17_Chr7g0223621 | 30.841 | 428 | 284 | 6 | 2 | 424 | 8 | 428 | 1.45e-62 | 221 |
Msa0360660 | MtrunA17_Chr7g0223741 | 30.417 | 503 | 322 | 11 | 4 | 493 | 10 | 497 | 4.52e-62 | 219 |
Msa0360660 | MtrunA17_Chr7g0248151 | 31.850 | 427 | 279 | 6 | 4 | 425 | 10 | 429 | 7.82e-62 | 219 |
Msa0360660 | MtrunA17_Chr2g0293601 | 31.172 | 401 | 271 | 4 | 4 | 400 | 10 | 409 | 5.05e-61 | 213 |
Msa0360660 | MtrunA17_Chr7g0223821 | 31.111 | 405 | 272 | 5 | 4 | 403 | 10 | 412 | 7.25e-61 | 218 |
Msa0360660 | MtrunA17_Chr7g0223801 | 31.860 | 430 | 272 | 9 | 4 | 424 | 10 | 427 | 8.53e-61 | 216 |
Msa0360660 | MtrunA17_Chr7g0223631 | 32.587 | 402 | 252 | 5 | 4 | 401 | 10 | 396 | 8.73e-61 | 216 |
Msa0360660 | MtrunA17_Chr2g0299921 | 32.982 | 379 | 250 | 2 | 4 | 381 | 1030 | 1405 | 1.55e-60 | 223 |
Msa0360660 | MtrunA17_Chr2g0299921 | 31.161 | 353 | 239 | 2 | 4 | 355 | 1414 | 1763 | 5.16e-51 | 194 |
Msa0360660 | MtrunA17_Chr5g0444011 | 56.684 | 187 | 72 | 1 | 566 | 743 | 1 | 187 | 5.06e-60 | 201 |
Msa0360660 | MtrunA17_Chr7g0233301 | 31.830 | 399 | 267 | 4 | 4 | 398 | 10 | 407 | 5.93e-60 | 213 |
Msa0360660 | MtrunA17_Chr7g0217971 | 31.266 | 403 | 248 | 5 | 4 | 402 | 10 | 387 | 1.07e-59 | 213 |
Msa0360660 | MtrunA17_Chr2g0299851 | 32.718 | 379 | 251 | 2 | 4 | 381 | 1039 | 1414 | 3.24e-59 | 218 |
Msa0360660 | MtrunA17_Chr2g0293561 | 30.423 | 378 | 253 | 3 | 4 | 372 | 10 | 386 | 7.20e-58 | 202 |
Msa0360660 | MtrunA17_Chr2g0299791 | 32.454 | 379 | 252 | 2 | 4 | 381 | 1043 | 1418 | 1.70e-57 | 213 |
Msa0360660 | MtrunA17_Chr2g0331381 | 31.148 | 427 | 258 | 7 | 2 | 424 | 5 | 399 | 9.03e-57 | 202 |
Msa0360660 | MtrunA17_Chr2g0299821 | 28.910 | 422 | 290 | 4 | 4 | 416 | 10 | 430 | 7.15e-54 | 194 |
Msa0360660 | MtrunA17_Chr6g0462611 | 32.641 | 337 | 225 | 2 | 68 | 403 | 24 | 359 | 7.82e-54 | 197 |
Msa0360660 | MtrunA17_Chr2g0299881 | 31.818 | 396 | 258 | 4 | 3 | 391 | 1038 | 1428 | 1.30e-52 | 198 |
Msa0360660 | MtrunA17_Chr4g0012541 | 29.647 | 425 | 281 | 6 | 4 | 424 | 10 | 420 | 2.36e-52 | 192 |
Msa0360660 | MtrunA17_Chr7g0215261 | 28.302 | 424 | 261 | 7 | 4 | 424 | 10 | 393 | 1.67e-51 | 189 |
Msa0360660 | MtrunA17_Chr7g0223831 | 28.706 | 425 | 266 | 6 | 4 | 424 | 10 | 401 | 2.31e-51 | 189 |
Msa0360660 | MtrunA17_Chr2g0277021 | 31.527 | 406 | 262 | 6 | 3 | 403 | 71 | 465 | 7.22e-51 | 189 |
Msa0360660 | MtrunA17_Chr7g0223541 | 32.249 | 338 | 226 | 3 | 65 | 400 | 30 | 366 | 3.16e-48 | 180 |
Msa0360660 | MtrunA17_Chr7g0223681 | 33.429 | 347 | 217 | 6 | 83 | 424 | 2 | 339 | 1.39e-47 | 177 |
Msa0360660 | MtrunA17_Chr7g0228281 | 31.803 | 305 | 205 | 2 | 4 | 306 | 71 | 374 | 1.43e-47 | 179 |
Msa0360660 | MtrunA17_Chr1g0151991 | 31.273 | 275 | 186 | 2 | 4 | 276 | 10 | 283 | 1.19e-45 | 165 |
Msa0360660 | MtrunA17_Chr7g0245521 | 31.439 | 264 | 178 | 3 | 4 | 265 | 10 | 272 | 1.32e-41 | 153 |
Msa0360660 | MtrunA17_Chr6g0462861 | 27.295 | 403 | 273 | 7 | 4 | 403 | 10 | 395 | 5.54e-41 | 160 |
Msa0360660 | MtrunA17_Chr8g0390821 | 27.033 | 455 | 261 | 11 | 4 | 403 | 12 | 450 | 9.74e-41 | 159 |
Msa0360660 | MtrunA17_Chr2g0293271 | 27.100 | 369 | 214 | 7 | 15 | 381 | 45 | 360 | 1.17e-36 | 143 |
Msa0360660 | MtrunA17_Chr1g0166551 | 30.488 | 246 | 167 | 4 | 168 | 410 | 100 | 344 | 1.15e-29 | 124 |
Msa0360660 | MtrunA17_Chr6g0462791 | 36.527 | 167 | 104 | 2 | 112 | 278 | 13 | 177 | 4.15e-28 | 111 |
Msa0360660 | MtrunA17_Chr6g0462631 | 28.378 | 296 | 164 | 6 | 112 | 403 | 42 | 293 | 6.77e-28 | 114 |
Msa0360660 | MtrunA17_Chr1g0188601 | 32.642 | 193 | 127 | 2 | 84 | 275 | 1 | 191 | 2.05e-27 | 110 |
Msa0360660 | MtrunA17_Chr5g0394391 | 26.667 | 420 | 279 | 12 | 4 | 404 | 30 | 439 | 3.51e-25 | 110 |
Msa0360660 | MtrunA17_Chr6g0462751 | 25.429 | 350 | 196 | 7 | 68 | 411 | 21 | 311 | 6.04e-23 | 100 |
Msa0360660 | MtrunA17_Chr7g0223671 | 29.570 | 186 | 128 | 2 | 68 | 252 | 10 | 193 | 5.27e-22 | 94.7 |
Msa0360660 | MtrunA17_Chr7g0223861 | 35.593 | 118 | 76 | 0 | 70 | 187 | 4 | 121 | 2.25e-20 | 87.8 |
Msa0360660 | MtrunA17_Chr4g0046881 | 34.783 | 138 | 82 | 3 | 133 | 268 | 20 | 151 | 2.36e-19 | 85.5 |
Msa0360660 | MtrunA17_Chr7g0223761 | 30.539 | 167 | 113 | 2 | 238 | 401 | 7 | 173 | 1.08e-17 | 85.5 |
Msa0360660 | MtrunA17_Chr4g0064621 | 24.115 | 452 | 304 | 14 | 4 | 429 | 141 | 579 | 2.27e-17 | 86.7 |
Msa0360660 | MtrunA17_Chr7g0223771 | 29.730 | 148 | 103 | 1 | 88 | 235 | 4 | 150 | 2.92e-17 | 80.1 |
Msa0360660 | MtrunA17_Chr4g0060241 | 26.471 | 306 | 202 | 8 | 113 | 404 | 125 | 421 | 3.80e-16 | 82.4 |
Msa0360660 | MtrunA17_Chr6g0462701 | 28.947 | 152 | 83 | 2 | 112 | 263 | 42 | 168 | 5.18e-12 | 65.1 |
Msa0360660 | MtrunA17_Chr6g0481391 | 25.620 | 121 | 87 | 1 | 30 | 150 | 13 | 130 | 1.21e-11 | 62.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0360660 | AT1G11660.4 | 59.392 | 756 | 292 | 4 | 1 | 755 | 1 | 742 | 0.0 | 902 |
Msa0360660 | AT1G11660.3 | 59.392 | 756 | 292 | 4 | 1 | 755 | 1 | 742 | 0.0 | 902 |
Msa0360660 | AT1G11660.1 | 59.392 | 756 | 292 | 4 | 1 | 755 | 1 | 742 | 0.0 | 902 |
Msa0360660 | AT1G11660.2 | 57.858 | 719 | 288 | 4 | 38 | 755 | 1 | 705 | 0.0 | 833 |
Msa0360660 | AT1G79930.1 | 49.811 | 793 | 357 | 6 | 1 | 755 | 1 | 790 | 0.0 | 778 |
Msa0360660 | AT1G79930.2 | 50.639 | 782 | 343 | 7 | 1 | 743 | 1 | 778 | 0.0 | 775 |
Msa0360660 | AT1G79920.1 | 52.080 | 649 | 275 | 6 | 1 | 617 | 1 | 645 | 0.0 | 667 |
Msa0360660 | AT1G79920.3 | 52.080 | 649 | 275 | 6 | 1 | 617 | 1 | 645 | 0.0 | 663 |
Msa0360660 | AT1G79920.2 | 52.080 | 649 | 275 | 6 | 1 | 617 | 1 | 645 | 0.0 | 663 |
Msa0360660 | AT1G79920.4 | 52.080 | 649 | 275 | 6 | 1 | 617 | 1 | 645 | 0.0 | 663 |
Msa0360660 | AT4G16660.1 | 28.993 | 814 | 511 | 24 | 2 | 755 | 25 | 831 | 1.18e-88 | 298 |
Msa0360660 | AT4G16660.2 | 28.993 | 814 | 511 | 24 | 2 | 755 | 49 | 855 | 2.00e-88 | 298 |
Msa0360660 | AT5G28540.1 | 28.144 | 668 | 408 | 15 | 2 | 662 | 36 | 638 | 1.06e-77 | 264 |
Msa0360660 | AT5G42020.3 | 27.844 | 668 | 410 | 15 | 2 | 662 | 41 | 643 | 3.33e-77 | 263 |
Msa0360660 | AT5G42020.1 | 27.844 | 668 | 410 | 15 | 2 | 662 | 36 | 638 | 3.53e-77 | 263 |
Msa0360660 | AT1G16030.1 | 27.602 | 663 | 416 | 13 | 4 | 662 | 9 | 611 | 6.07e-76 | 259 |
Msa0360660 | AT5G02500.1 | 27.970 | 665 | 411 | 14 | 4 | 662 | 10 | 612 | 7.18e-76 | 259 |
Msa0360660 | AT3G12580.1 | 27.803 | 669 | 413 | 15 | 4 | 665 | 10 | 615 | 1.13e-74 | 255 |
Msa0360660 | AT3G09440.1 | 28.293 | 668 | 405 | 15 | 4 | 662 | 10 | 612 | 2.72e-74 | 254 |
Msa0360660 | AT3G09440.4 | 28.293 | 668 | 405 | 15 | 4 | 662 | 10 | 612 | 2.72e-74 | 254 |
Msa0360660 | AT3G09440.2 | 28.293 | 668 | 405 | 15 | 4 | 662 | 10 | 612 | 2.72e-74 | 254 |
Msa0360660 | AT3G09440.3 | 28.293 | 668 | 405 | 15 | 4 | 662 | 10 | 612 | 2.72e-74 | 254 |
Msa0360660 | AT1G09080.2 | 28.700 | 669 | 402 | 14 | 2 | 662 | 41 | 642 | 1.09e-73 | 253 |
Msa0360660 | AT1G09080.1 | 28.700 | 669 | 402 | 14 | 2 | 662 | 51 | 652 | 1.60e-73 | 253 |
Msa0360660 | AT5G02500.2 | 34.301 | 379 | 247 | 2 | 4 | 381 | 10 | 387 | 6.02e-72 | 244 |
Msa0360660 | AT5G42020.2 | 32.574 | 439 | 276 | 7 | 2 | 436 | 36 | 458 | 9.04e-72 | 246 |
Msa0360660 | AT1G56410.1 | 32.754 | 403 | 267 | 3 | 4 | 403 | 10 | 411 | 2.17e-70 | 243 |
Msa0360660 | AT5G02490.1 | 28.209 | 670 | 403 | 18 | 4 | 662 | 10 | 612 | 8.06e-70 | 242 |
Msa0360660 | AT5G09590.1 | 33.498 | 406 | 253 | 6 | 3 | 403 | 59 | 452 | 1.95e-66 | 234 |
Msa0360660 | AT4G37910.1 | 33.420 | 383 | 240 | 4 | 3 | 380 | 54 | 426 | 8.61e-61 | 218 |
Msa0360660 | AT4G37910.2 | 33.420 | 383 | 240 | 4 | 3 | 380 | 54 | 426 | 8.61e-61 | 218 |
Msa0360660 | AT5G49910.1 | 32.266 | 406 | 259 | 6 | 3 | 403 | 80 | 474 | 1.20e-51 | 192 |
Msa0360660 | AT4G24280.1 | 31.527 | 406 | 262 | 6 | 3 | 403 | 80 | 474 | 2.05e-49 | 186 |
Msa0360660 | AT2G32120.1 | 24.777 | 448 | 278 | 16 | 4 | 425 | 31 | 445 | 2.23e-21 | 99.4 |
Msa0360660 | AT2G32120.2 | 24.777 | 448 | 278 | 16 | 4 | 425 | 31 | 445 | 2.23e-21 | 99.4 |
Find 174 sgRNAs with CRISPR-Local
Find 637 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATTTATAGGCAGGAGATTTC+TGG | 0.177339 | 3_1:+50129742 | Msa0360660:CDS |
CCCATCTCGGATTGTGTTAT+TGG | 0.218141 | 3_1:+50129941 | Msa0360660:CDS |
GAATCTTGCATCTGGATTAT+TGG | 0.227874 | 3_1:+50130447 | Msa0360660:CDS |
TTGTGGAGAATCACACTTAT+TGG | 0.239483 | 3_1:-50133100 | None:intergenic |
AAGATTGGGTCGACATTCTT+AGG | 0.240585 | 3_1:-50135202 | None:intergenic |
ACAAAATTAATTGGTCTGTT+TGG | 0.247040 | 3_1:+50137942 | Msa0360660:three_prime_UTR |
TGCATTGCAGCGTTTGAGTT+TGG | 0.267137 | 3_1:+50130160 | Msa0360660:CDS |
CAAAATTACAAGCAAATTAA+TGG | 0.282005 | 3_1:-50129492 | None:intergenic |
TCTTTGTCATCTTCGTCTTC+TGG | 0.285234 | 3_1:-50137421 | None:intergenic |
CAAAATTAATTGGTCTGTTT+GGG | 0.289540 | 3_1:+50137943 | Msa0360660:three_prime_UTR |
TTTCTTCAAATGAATCAAAT+AGG | 0.295577 | 3_1:+50137854 | Msa0360660:three_prime_UTR |
TTTCATTTGAAATACTTAGA+TGG | 0.296582 | 3_1:+50129836 | Msa0360660:CDS |
AGCTAGTTGGTTCAGGTTCT+AGG | 0.310491 | 3_1:+50130542 | Msa0360660:CDS |
CTCTGTCCTGTTGAGCTAAC+TGG | 0.311382 | 3_1:-50133570 | None:intergenic |
TCGCAAGTGAAGAGATTTAT+AGG | 0.314040 | 3_1:+50129728 | Msa0360660:CDS |
AGTGATTTGTGGTGAAAATT+AGG | 0.317576 | 3_1:+50129385 | Msa0360660:intron |
CTATCTGAGGTCTCGGACTT+AGG | 0.323825 | 3_1:-50133042 | None:intergenic |
AAATCTCTTCACTTGCGATA+TGG | 0.325541 | 3_1:-50129723 | None:intergenic |
GCATTGCAGCGTTTGAGTTT+GGG | 0.325875 | 3_1:+50130161 | Msa0360660:CDS |
TCTGTGGAGCTAGTTGGTTC+AGG | 0.330516 | 3_1:+50130535 | Msa0360660:CDS |
GATTGAAGTCCATATGAAAA+AGG | 0.332999 | 3_1:-50131182 | None:intergenic |
GCCAACTGATTTGTCCCATT+TGG | 0.343188 | 3_1:+50131292 | Msa0360660:CDS |
ACTCACTTGCATTCAACTTT+CGG | 0.346468 | 3_1:-50130615 | None:intergenic |
AAAACTAGAAGATCTGAAAA+AGG | 0.347739 | 3_1:+50134826 | Msa0360660:CDS |
ACCCCTGCTGTCGTCTGCTT+TGG | 0.352853 | 3_1:+50129638 | Msa0360660:CDS |
CTTGGAATGAGATGGCCTTT+TGG | 0.353900 | 3_1:-50131248 | None:intergenic |
AATCGTTCGCTTTGATTCAA+TGG | 0.375856 | 3_1:-50128736 | None:intergenic |
AGCGCCATTGGCAACAGAAT+TGG | 0.380177 | 3_1:-50133067 | None:intergenic |
ATATGACTTGACCATAAGAT+TGG | 0.380654 | 3_1:-50135217 | None:intergenic |
GAGATTTCTGGATCCTGATA+TGG | 0.383130 | 3_1:+50129754 | Msa0360660:CDS |
GTGAAGTAGATTGTGTGAAT+TGG | 0.384578 | 3_1:+50129463 | Msa0360660:five_prime_UTR |
AGCATAGACATTATTTGAAC+TGG | 0.388293 | 3_1:-50129875 | None:intergenic |
GCGCAATAGAGGAGCTAAAC+AGG | 0.389650 | 3_1:+50135245 | Msa0360660:CDS |
GATGGATGAGAAAGATGTTA+AGG | 0.391889 | 3_1:+50130399 | Msa0360660:CDS |
AGAACTCCAGTTAGCTCAAC+AGG | 0.394053 | 3_1:+50133564 | Msa0360660:CDS |
ACGCAGCCTAATGCAAGCCT+TGG | 0.398015 | 3_1:-50130308 | None:intergenic |
GAATTTGAGAATCTTGCATC+TGG | 0.403441 | 3_1:+50130439 | Msa0360660:CDS |
TCGCCAAAGCAGACGACAGC+AGG | 0.408209 | 3_1:-50129641 | None:intergenic |
AGAATGTCGACCCAATCTTA+TGG | 0.412429 | 3_1:+50135206 | Msa0360660:CDS |
TCAATAAATGCAACATAACT+TGG | 0.417342 | 3_1:-50130112 | None:intergenic |
TCGATATTTAGCGGTGCCTC+TGG | 0.422641 | 3_1:-50130370 | None:intergenic |
TCTTTGTACCGAATCTCAAT+TGG | 0.423825 | 3_1:-50134932 | None:intergenic |
CTTGCGATATGGTTGACTTT+GGG | 0.426132 | 3_1:-50129712 | None:intergenic |
GTTGAATGATGAATCGAAAC+GGG | 0.426655 | 3_1:+50129613 | Msa0360660:CDS |
TTCGTCTTCTGAAGGTGTCC+TGG | 0.427253 | 3_1:-50137383 | None:intergenic |
GACTGAGGATTGGCTTTATG+AGG | 0.428957 | 3_1:+50134769 | Msa0360660:CDS |
CTTGACGCGGCAATAATTGC+TGG | 0.430407 | 3_1:+50130004 | Msa0360660:CDS |
GATAATAATGTACTCACTGC+TGG | 0.437528 | 3_1:-50130568 | None:intergenic |
TCAATGTATTCACGGATGAT+TGG | 0.438435 | 3_1:-50137458 | None:intergenic |
AAATTCTCATTCACTGCAAT+AGG | 0.439271 | 3_1:-50133496 | None:intergenic |
TTCATTTGAAATACTTAGAT+GGG | 0.442131 | 3_1:+50129837 | Msa0360660:CDS |
AGAATCCTTGGAGGAACAAA+TGG | 0.444352 | 3_1:-50137780 | None:intergenic |
TTGCGTAGAAAGCTTCCAAA+TGG | 0.446853 | 3_1:-50131307 | None:intergenic |
TGCAAGTCGGTGAAGTATGA+TGG | 0.449561 | 3_1:-50129968 | None:intergenic |
ACTGCAACTGCTCTTAGTTA+TGG | 0.451796 | 3_1:+50130058 | Msa0360660:CDS |
GCAGTGAATGAGAATTTCTA+TGG | 0.456214 | 3_1:+50133502 | Msa0360660:CDS |
GATGGGAAGACCACAGTACT+TGG | 0.456596 | 3_1:-50131266 | None:intergenic |
ATTTCTTCTGTGGAGCTAGT+TGG | 0.456860 | 3_1:+50130529 | Msa0360660:CDS |
CGTTTGAGTTTGGGCAAATG+AGG | 0.457526 | 3_1:+50130170 | Msa0360660:CDS |
TCATATTAAGAGCGCAATAG+AGG | 0.458464 | 3_1:+50135234 | Msa0360660:CDS |
GACAAATCAGTTGGCTTGGA+TGG | 0.460531 | 3_1:-50131284 | None:intergenic |
ACTTGCGATATGGTTGACTT+TGG | 0.461121 | 3_1:-50129713 | None:intergenic |
GTATTCTCGCACACGGTATG+TGG | 0.463406 | 3_1:-50130680 | None:intergenic |
AGCATTAATTGAAGCAGGCT+TGG | 0.471739 | 3_1:+50130495 | Msa0360660:CDS |
TCAATTAATGCTTCGTTGCA+AGG | 0.472169 | 3_1:-50130484 | None:intergenic |
AACAGCTCTTCAACACATAT+CGG | 0.473623 | 3_1:+50134696 | Msa0360660:intron |
TTGTCATCTTCGTCTTCTGA+AGG | 0.473797 | 3_1:-50137391 | None:intergenic |
AAGAGAGGGATGTCATATCT+AGG | 0.475264 | 3_1:+50134735 | Msa0360660:CDS |
GCGCCTCATCAATGTATTCA+CGG | 0.476825 | 3_1:-50137466 | None:intergenic |
TGTGTGGCTTCAGTTGATCA+AGG | 0.477113 | 3_1:+50132972 | Msa0360660:intron |
AACGAAGCATTAATTGAAGC+AGG | 0.477356 | 3_1:+50130490 | Msa0360660:CDS |
GGTACTATCTTCAGCGCCAT+TGG | 0.480640 | 3_1:-50133079 | None:intergenic |
ATGGATGAGAAAGATGTTAA+GGG | 0.484542 | 3_1:+50130400 | Msa0360660:CDS |
ATGGGACAAATCAGTTGGCT+TGG | 0.486215 | 3_1:-50131288 | None:intergenic |
TTTGGGAAAAGTACACCATC+TGG | 0.486296 | 3_1:-50131230 | None:intergenic |
GCATGGATCTCAAGGTAGTA+AGG | 0.492874 | 3_1:+50132808 | Msa0360660:CDS |
GTAGATTGTGTGAATTGGAT+TGG | 0.496511 | 3_1:+50129468 | Msa0360660:five_prime_UTR |
GCTAAATATCGAGTGTCTGA+TGG | 0.498645 | 3_1:+50130381 | Msa0360660:CDS |
TTTCAGATCGGTCCTATGCA+TGG | 0.498893 | 3_1:+50132791 | Msa0360660:intron |
ATTGGTACTATCTGAGGTCT+CGG | 0.498902 | 3_1:-50133049 | None:intergenic |
TGAAACAAAACGCCACCATC+CGG | 0.499778 | 3_1:-50129818 | None:intergenic |
CTATACTTGTCAGAAGGTAT+CGG | 0.500444 | 3_1:-50137656 | None:intergenic |
TATGTTGCATTTATTGACAT+TGG | 0.501872 | 3_1:+50130118 | Msa0360660:CDS |
TGTTGAATGATGAATCGAAA+CGG | 0.503473 | 3_1:+50129612 | Msa0360660:CDS |
CTAATGCCAAGGCTTGCATT+AGG | 0.505620 | 3_1:+50130302 | Msa0360660:CDS |
TAGATATGACATCCCTCTCT+TGG | 0.505654 | 3_1:-50134733 | None:intergenic |
CTTGCATTCAACTTTCGGCT+CGG | 0.505967 | 3_1:-50130610 | None:intergenic |
TCTGGATCCTGATATGGAAA+AGG | 0.508996 | 3_1:+50129760 | Msa0360660:CDS |
AAGTGAAGAGATTTATAGGC+AGG | 0.509278 | 3_1:+50129732 | Msa0360660:CDS |
ACAGTACTTACATAACTTTG+TGG | 0.511678 | 3_1:-50133117 | None:intergenic |
TATGACTTGACCATAAGATT+GGG | 0.512744 | 3_1:-50135216 | None:intergenic |
AGATTTGGAGGTACCCATCT+CGG | 0.515016 | 3_1:+50129928 | Msa0360660:CDS |
TCTTGAAACTTCTCAAGGGC+CGG | 0.516494 | 3_1:+50129799 | Msa0360660:CDS |
TGGTGGATCCAATTGAGATT+CGG | 0.522302 | 3_1:+50134924 | Msa0360660:CDS |
ACCAATAACACAATCCGAGA+TGG | 0.528131 | 3_1:-50129942 | None:intergenic |
TGCGTAGAAAGCTTCCAAAT+GGG | 0.529319 | 3_1:-50131306 | None:intergenic |
CGAAGATGACAAAGACAAGT+TGG | 0.531629 | 3_1:+50137429 | Msa0360660:CDS |
CTCCCTCTTGAAACTTCTCA+AGG | 0.537397 | 3_1:+50129794 | Msa0360660:CDS |
TGAGTTGAAATGAGTGTGGT+AGG | 0.537638 | 3_1:+50129527 | Msa0360660:exon |
TTGCTGTGGCAAAGCATCGC+GGG | 0.538277 | 3_1:+50129579 | Msa0360660:CDS |
TGTCTATGAGACGAGGAGTA+AGG | 0.539018 | 3_1:+50133636 | Msa0360660:CDS |
TACTTAAATTAGCCTCATGA+GGG | 0.539890 | 3_1:-50137740 | None:intergenic |
TGCACAACATAGTGAAATCC+AGG | 0.540959 | 3_1:+50137365 | Msa0360660:CDS |
GTACTTAAATTAGCCTCATG+AGG | 0.543959 | 3_1:-50137741 | None:intergenic |
TCCAAATGGGACAAATCAGT+TGG | 0.545647 | 3_1:-50131293 | None:intergenic |
GACAACCATTTGTTCCTCCA+AGG | 0.546064 | 3_1:+50137775 | Msa0360660:three_prime_UTR |
TTGACGCGGCAATAATTGCT+GGG | 0.549851 | 3_1:+50130005 | Msa0360660:CDS |
ACAAATCAGTTGGCTTGGAT+GGG | 0.550025 | 3_1:-50131283 | None:intergenic |
AAAATCTCTAGAATCCTTGG+AGG | 0.551580 | 3_1:-50137789 | None:intergenic |
CTTCACCGACTTGCAGAGAC+GGG | 0.553538 | 3_1:+50129976 | Msa0360660:CDS |
TATTCTCGCACACGGTATGT+GGG | 0.555935 | 3_1:-50130679 | None:intergenic |
CGAATTTCTGATAGACCAGA+TGG | 0.560566 | 3_1:+50131215 | Msa0360660:CDS |
TCAAATAGGTTATGCCTAAG+TGG | 0.560702 | 3_1:+50137868 | Msa0360660:three_prime_UTR |
GTTTGCAAGAGACTGAGGAT+TGG | 0.563246 | 3_1:+50134759 | Msa0360660:CDS |
TGCAGAGAAGATTTCTTCTG+TGG | 0.563467 | 3_1:+50130519 | Msa0360660:CDS |
CAGTCGTGTATCAGTCTCAA+AGG | 0.575227 | 3_1:-50130034 | None:intergenic |
CCAATAACACAATCCGAGAT+GGG | 0.575647 | 3_1:-50129941 | None:intergenic |
GCAAGTCGGTGAAGTATGAT+GGG | 0.575797 | 3_1:-50129967 | None:intergenic |
GAAAAGATAAGGCGAACAGA+AGG | 0.576632 | 3_1:+50133470 | Msa0360660:CDS |
CGCCAAAGCAGACGACAGCA+GGG | 0.576685 | 3_1:-50129640 | None:intergenic |
AGATTGTCTAAGAAAAGATA+AGG | 0.579423 | 3_1:+50133459 | Msa0360660:CDS |
ATGTTAAGGGCTTTATAACA+AGG | 0.580637 | 3_1:+50130413 | Msa0360660:CDS |
TTAGCAATGAAGCAGAGCAT+TGG | 0.581229 | 3_1:+50135146 | Msa0360660:CDS |
AGAGCATTGGCTAACAGAGA+AGG | 0.581697 | 3_1:+50135159 | Msa0360660:CDS |
CGCAATCGTCACCATTCACA+AGG | 0.581888 | 3_1:+50128778 | Msa0360660:five_prime_UTR |
TGATTTATGTACGTAGTATG+TGG | 0.584531 | 3_1:+50137901 | Msa0360660:three_prime_UTR |
GGTCCTATGCATGGATCTCA+AGG | 0.585543 | 3_1:+50132800 | Msa0360660:CDS |
TCTGCTTTGGCGAGAAGCAG+CGG | 0.586019 | 3_1:+50129651 | Msa0360660:CDS |
ATCAGACACTCGATATTTAG+CGG | 0.586237 | 3_1:-50130379 | None:intergenic |
ACTTCACCGACTTGCAGAGA+CGG | 0.589672 | 3_1:+50129975 | Msa0360660:CDS |
TGATGTGTATTCTAATGCCA+AGG | 0.591618 | 3_1:+50130291 | Msa0360660:CDS |
AACAGAATTGGTACTATCTG+AGG | 0.592528 | 3_1:-50133055 | None:intergenic |
GAAACTTCTCAAGGGCCGGA+TGG | 0.593136 | 3_1:+50129803 | Msa0360660:CDS |
ACTTCTCAAGGGCCGGATGG+TGG | 0.593340 | 3_1:+50129806 | Msa0360660:CDS |
GAGTTGAAATGAGTGTGGTA+GGG | 0.594039 | 3_1:+50129528 | Msa0360660:exon |
ACTCCTCGTCTCATAGACAT+AGG | 0.598057 | 3_1:-50133632 | None:intergenic |
AGCTCAACAGGACAGAGCTG+TGG | 0.600190 | 3_1:+50133576 | Msa0360660:CDS |
CTCATAGACATAGGACTCCA+AGG | 0.602157 | 3_1:-50133623 | None:intergenic |
GCTTTGCTAGTGACCAAGAG+AGG | 0.604732 | 3_1:+50134720 | Msa0360660:CDS |
AATGAACATGAACTACCACC+TGG | 0.605194 | 3_1:+50131329 | Msa0360660:CDS |
CCACAGTACTTGGAATGAGA+TGG | 0.606806 | 3_1:-50131256 | None:intergenic |
ATACCGTGTGCGAGAATACG+AGG | 0.608025 | 3_1:+50130684 | Msa0360660:CDS |
CAAAGAAAAGAAGAACACCT+TGG | 0.609634 | 3_1:+50133606 | Msa0360660:CDS |
AGTACCAATTCTGTTGCCAA+TGG | 0.610914 | 3_1:+50133063 | Msa0360660:CDS |
AATTGAATATACCTTGTGAA+TGG | 0.611723 | 3_1:-50128789 | None:intergenic |
TTTCTATGGTGGAATGACAA+TGG | 0.611799 | 3_1:+50133516 | Msa0360660:CDS |
TAGGAGTTTGCAAGAGACTG+AGG | 0.618731 | 3_1:+50134754 | Msa0360660:CDS |
TCAGTTGATCAAGGATCGCA+CGG | 0.618974 | 3_1:+50132981 | Msa0360660:intron |
CATTGGTCAATGCGACACTC+AGG | 0.620652 | 3_1:+50130135 | Msa0360660:CDS |
TGTTAAGGGCTTTATAACAA+GGG | 0.620789 | 3_1:+50130414 | Msa0360660:CDS |
GAGGATTGGCTTTATGAGGA+CGG | 0.621172 | 3_1:+50134773 | Msa0360660:CDS |
GGCCCTTGAGAAGTTTCAAG+AGG | 0.625597 | 3_1:-50129797 | None:intergenic |
TCCCTCTTGAAACTTCTCAA+GGG | 0.627702 | 3_1:+50129795 | Msa0360660:CDS |
CTACCTTGAGATCCATGCAT+AGG | 0.630694 | 3_1:-50132803 | None:intergenic |
CTTTGCTAGTGACCAAGAGA+GGG | 0.635803 | 3_1:+50134721 | Msa0360660:CDS |
GCCCTTGAGAAGTTTCAAGA+GGG | 0.636685 | 3_1:-50129796 | None:intergenic |
CGAGTTCAACTAAATCTGCA+TGG | 0.636814 | 3_1:+50132845 | Msa0360660:CDS |
AGTGTGGTAGGGTTTGACAT+TGG | 0.639158 | 3_1:+50129539 | Msa0360660:CDS |
CTTAAATTAGCCTCATGAGG+GGG | 0.650522 | 3_1:-50137738 | None:intergenic |
CTAAACTGAGCATACCGTGA+AGG | 0.651343 | 3_1:-50131372 | None:intergenic |
CATCCGTGAATACATTGATG+AGG | 0.657760 | 3_1:+50137463 | Msa0360660:exon |
TGAGAACTGTGTTATTGCTG+TGG | 0.670838 | 3_1:+50129565 | Msa0360660:CDS |
GTGAATGAGAATTTCTATGG+TGG | 0.675812 | 3_1:+50133505 | Msa0360660:CDS |
ATATGCCCGTCTCTGCAAGT+CGG | 0.684436 | 3_1:-50129981 | None:intergenic |
ACTTAAATTAGCCTCATGAG+GGG | 0.689987 | 3_1:-50137739 | None:intergenic |
GCCAAAGCAGACGACAGCAG+GGG | 0.693366 | 3_1:-50129639 | None:intergenic |
AAAGTGAGTTGAAATGAGTG+TGG | 0.694552 | 3_1:+50129523 | Msa0360660:exon |
CCATCTCATTCCAAGTACTG+TGG | 0.696543 | 3_1:+50131256 | Msa0360660:CDS |
ATTGCTGTGGCAAAGCATCG+CGG | 0.704864 | 3_1:+50129578 | Msa0360660:CDS |
AAACCTCGTATTCTCGCACA+CGG | 0.711002 | 3_1:-50130687 | None:intergenic |
GCAAGTGAGTGTGTAGCTCG+TGG | 0.714591 | 3_1:+50130628 | Msa0360660:CDS |
CTTGTGAATGGTGACGATTG+CGG | 0.715321 | 3_1:-50128777 | None:intergenic |
AGTCCTATGTCTATGAGACG+AGG | 0.719415 | 3_1:+50133629 | Msa0360660:CDS |
GAGACGGGCATATCTTGACG+CGG | 0.727755 | 3_1:+50129991 | Msa0360660:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTATTATTTTTTTGAATTTC+AGG | + | chr3_1:50131780-50131799 | Msa0360660:intron | 10.0% |
!!! | TTTCTAAGAAATATTAAAAA+CGG | + | chr3_1:50132271-50132290 | Msa0360660:intron | 10.0% |
!!! | GATTATCTTATATTTTTTAT+TGG | + | chr3_1:50134104-50134123 | Msa0360660:intron | 10.0% |
!! | TAAAAATTCACAAAATTAAT+TGG | + | chr3_1:50137933-50137952 | Msa0360660:three_prime_UTR | 10.0% |
! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr3_1:50137708-50137727 | None:intergenic | 100.0% |
! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr3_1:50137708-50137727 | None:intergenic | 100.0% |
! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr3_1:50137708-50137727 | None:intergenic | 100.0% |
! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr3_1:50137708-50137727 | None:intergenic | 100.0% |
! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr3_1:50137708-50137727 | None:intergenic | 100.0% |
! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr3_1:50137708-50137727 | None:intergenic | 100.0% |
! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr3_1:50137708-50137727 | None:intergenic | 100.0% |
!!! | AAAAATTGAATTTTTCGAAA+TGG | + | chr3_1:50128950-50128969 | Msa0360660:intron | 15.0% |
!!! | AAAATTGAATTTTTCGAAAT+GGG | + | chr3_1:50128951-50128970 | Msa0360660:intron | 15.0% |
!! | TTTAAAAAGCTTATGAAAAT+TGG | + | chr3_1:50129161-50129180 | Msa0360660:intron | 15.0% |
!! | ACACTAATATAAGAAAATAA+AGG | - | chr3_1:50131592-50131611 | None:intergenic | 15.0% |
!! | AAAACTTATATAGATATAGA+CGG | + | chr3_1:50131845-50131864 | Msa0360660:intron | 15.0% |
!!! | TTCTAAGAAATATTAAAAAC+GGG | + | chr3_1:50132272-50132291 | Msa0360660:intron | 15.0% |
!!! | AAAAAAAAAAGGAAAAGTAT+TGG | - | chr3_1:50132362-50132381 | None:intergenic | 15.0% |
!! | TCATAATTTATACCAAAAAA+TGG | - | chr3_1:50132918-50132937 | None:intergenic | 15.0% |
!! | TAAAAAGTAAAATAGTTGTT+TGG | - | chr3_1:50133920-50133939 | None:intergenic | 15.0% |
!! | ACAAATATAAACTAATCTTA+AGG | - | chr3_1:50135295-50135314 | None:intergenic | 15.0% |
!! | TCTAATTTATTATATCATCA+TGG | - | chr3_1:50135807-50135826 | None:intergenic | 15.0% |
!! | TATCATGTAATTTCTTAAAA+TGG | + | chr3_1:50136498-50136517 | Msa0360660:intron | 15.0% |
!! | ATCATGTAATTTCTTAAAAT+GGG | + | chr3_1:50136499-50136518 | Msa0360660:intron | 15.0% |
!!! | TAATTTTGATATAAAAGCAA+GGG | - | chr3_1:50137314-50137333 | None:intergenic | 15.0% |
!!! | TTAATTTTGATATAAAAGCA+AGG | - | chr3_1:50137315-50137334 | None:intergenic | 15.0% |
!!! | ATTTTGAGGAAAAATTAAGT+GGG | - | chr3_1:50128902-50128921 | None:intergenic | 20.0% |
!!! | AATTTTGAGGAAAAATTAAG+TGG | - | chr3_1:50128903-50128922 | None:intergenic | 20.0% |
!!! | CTTGTTTTATTTACAGTTTA+AGG | + | chr3_1:50129030-50129049 | Msa0360660:intron | 20.0% |
!! | TATTTACAGTTTAAGGATTT+AGG | + | chr3_1:50129037-50129056 | Msa0360660:intron | 20.0% |
!! | ATTTACAGTTTAAGGATTTA+GGG | + | chr3_1:50129038-50129057 | Msa0360660:intron | 20.0% |
!! | CAAAATTACAAGCAAATTAA+TGG | - | chr3_1:50129495-50129514 | None:intergenic | 20.0% |
!!! | TTTCATTTGAAATACTTAGA+TGG | + | chr3_1:50129836-50129855 | Msa0360660:CDS | 20.0% |
!!! | TTCATTTGAAATACTTAGAT+GGG | + | chr3_1:50129837-50129856 | Msa0360660:CDS | 20.0% |
!! | ATACTGAAAATAAACCTTTA+AGG | - | chr3_1:50131011-50131030 | None:intergenic | 20.0% |
!!! | AGAAATTGCATTGATTTAAA+CGG | - | chr3_1:50131134-50131153 | None:intergenic | 20.0% |
!! | TTATAAATAACAGCTCAAAA+GGG | - | chr3_1:50131676-50131695 | None:intergenic | 20.0% |
!! | ATTATAAATAACAGCTCAAA+AGG | - | chr3_1:50131677-50131696 | None:intergenic | 20.0% |
!!! | TGTTTTATGAATTGTTGTTA+AGG | - | chr3_1:50131825-50131844 | None:intergenic | 20.0% |
!! | CATCACAGTTATATATTATA+AGG | - | chr3_1:50132123-50132142 | None:intergenic | 20.0% |
!! | AGAATATATTATGACATAAG+TGG | - | chr3_1:50132195-50132214 | None:intergenic | 20.0% |
!!! | TTTCTTAGAAACTTTGTTTT+AGG | - | chr3_1:50132262-50132281 | None:intergenic | 20.0% |
!!! | TTTTTTTTTTTTGTGTATCC+AGG | + | chr3_1:50132379-50132398 | Msa0360660:intron | 20.0% |
!! | ATGCTTACAAATATAATGTA+TGG | - | chr3_1:50132424-50132443 | None:intergenic | 20.0% |
!! | AACATAAATCAGACAATATT+TGG | - | chr3_1:50132449-50132468 | None:intergenic | 20.0% |
!!! | TTGTCTGATTTATGTTTTAT+TGG | + | chr3_1:50132453-50132472 | Msa0360660:intron | 20.0% |
!!! | AGTTAGAAATTTAACTTGAA+TGG | + | chr3_1:50132481-50132500 | Msa0360660:intron | 20.0% |
!!! | GGTTTTATTTTTCCATTTTT+TGG | + | chr3_1:50132903-50132922 | Msa0360660:intron | 20.0% |
!!! | CTTTCTTTTTCTTTTTCTTT+TGG | + | chr3_1:50133175-50133194 | Msa0360660:intron | 20.0% |
!! | TATTGCCATATTACATTTAT+GGG | - | chr3_1:50133277-50133296 | None:intergenic | 20.0% |
!!! | CTTTTAATATGAGAATCTAA+AGG | - | chr3_1:50134367-50134386 | None:intergenic | 20.0% |
!! | TTGATAAAGTTATAGCATAT+GGG | - | chr3_1:50134419-50134438 | None:intergenic | 20.0% |
!! | TATAACTTTATCAAGTAAAG+TGG | + | chr3_1:50134425-50134444 | Msa0360660:intron | 20.0% |
!! | GGATTAAAATAAAAACTTCA+TGG | + | chr3_1:50134459-50134478 | Msa0360660:intron | 20.0% |
!! | CATGAAATAAGATAAAAGTT+TGG | - | chr3_1:50134618-50134637 | None:intergenic | 20.0% |
!!! | TCTTAAGATAAGCTTTTAAT+TGG | + | chr3_1:50135094-50135113 | Msa0360660:intron | 20.0% |
!!! | CTTAAGATAAGCTTTTAATT+GGG | + | chr3_1:50135095-50135114 | Msa0360660:intron | 20.0% |
!!! | AGTTTATATTTGTCATTTTC+TGG | + | chr3_1:50135302-50135321 | Msa0360660:intron | 20.0% |
!! | ATATATTCTATCATTAGAAC+AGG | + | chr3_1:50135347-50135366 | Msa0360660:intron | 20.0% |
!! | TTCATATTAAAGGAAATTGA+AGG | - | chr3_1:50135714-50135733 | None:intergenic | 20.0% |
!! | TCATGTAATTTCTTAAAATG+GGG | + | chr3_1:50136500-50136519 | Msa0360660:intron | 20.0% |
!! | ATCAATCTAATTAACAAATG+TGG | - | chr3_1:50136806-50136825 | None:intergenic | 20.0% |
!! | ATATAAATCCCTAAAATTTG+AGG | + | chr3_1:50136996-50137015 | Msa0360660:intron | 20.0% |
!!! | TTCTAAATCCTCAAATTTTA+GGG | - | chr3_1:50137007-50137026 | None:intergenic | 20.0% |
!!! | ATTCTAAATCCTCAAATTTT+AGG | - | chr3_1:50137008-50137027 | None:intergenic | 20.0% |
!! | AATTAATTTATGTCTGTTGA+CGG | + | chr3_1:50137329-50137348 | Msa0360660:intron | 20.0% |
!! | TTTCTTCAAATGAATCAAAT+AGG | + | chr3_1:50137854-50137873 | Msa0360660:three_prime_UTR | 20.0% |
! | AATTGAATATACCTTGTGAA+TGG | - | chr3_1:50128792-50128811 | None:intergenic | 25.0% |
!! | CGAAAAATTCAATTTTTCCT+TGG | - | chr3_1:50128947-50128966 | None:intergenic | 25.0% |
!!! | GTTGTTTTTAGAAGCTATAT+TGG | + | chr3_1:50129118-50129137 | Msa0360660:intron | 25.0% |
! | CATCCATTCTTACTAATTAA+GGG | - | chr3_1:50129272-50129291 | None:intergenic | 25.0% |
!! | TTTTCTTTTGTAGTGATTTG+TGG | + | chr3_1:50129374-50129393 | Msa0360660:intron | 25.0% |
!! | AAAACAAATTTTCAGAGTGA+TGG | + | chr3_1:50130088-50130107 | Msa0360660:CDS | 25.0% |
! | TCAATAAATGCAACATAACT+TGG | - | chr3_1:50130115-50130134 | None:intergenic | 25.0% |
! | TATGTTGCATTTATTGACAT+TGG | + | chr3_1:50130118-50130137 | Msa0360660:CDS | 25.0% |
!! | TCATTTTGCTGAAAAATTCA+AGG | + | chr3_1:50130255-50130274 | Msa0360660:CDS | 25.0% |
!!! | ACTTTTTTGCTGATGTAAAA+TGG | + | chr3_1:50131054-50131073 | Msa0360660:intron | 25.0% |
! | GGGTACAATATTACAAATAA+AGG | - | chr3_1:50131113-50131132 | None:intergenic | 25.0% |
!!! | GAAATTGCATTGATTTAAAC+GGG | - | chr3_1:50131133-50131152 | None:intergenic | 25.0% |
!!! | GATATTAGTCCTTTTTCATA+TGG | + | chr3_1:50131173-50131192 | Msa0360660:CDS | 25.0% |
!! | TATGCTCAGTTTAGAATATT+TGG | + | chr3_1:50131381-50131400 | Msa0360660:intron | 25.0% |
!!! | GTGTTTTTGTTTTTAGTACT+AGG | + | chr3_1:50131509-50131528 | Msa0360660:intron | 25.0% |
!!! | AAATTTAACTTGAATGGATC+TGG | + | chr3_1:50132487-50132506 | Msa0360660:intron | 25.0% |
!!! | AATTTAACTTGAATGGATCT+GGG | + | chr3_1:50132488-50132507 | Msa0360660:intron | 25.0% |
! | CTATACCTAATTCAGAAATA+GGG | - | chr3_1:50132533-50132552 | None:intergenic | 25.0% |
! | TCTATACCTAATTCAGAAAT+AGG | - | chr3_1:50132534-50132553 | None:intergenic | 25.0% |
!! | TTGCTAAAAGGAAGTATATA+TGG | + | chr3_1:50132675-50132694 | Msa0360660:intron | 25.0% |
!!! | TCATTCAAATTTTGATGCAA+TGG | + | chr3_1:50133011-50133030 | Msa0360660:CDS | 25.0% |
! | TCTTATCCTATATATTGCAT+AGG | + | chr3_1:50133242-50133261 | Msa0360660:intron | 25.0% |
! | ACAAACCCATAAATGTAATA+TGG | + | chr3_1:50133269-50133288 | Msa0360660:intron | 25.0% |
! | GTATTGCCATATTACATTTA+TGG | - | chr3_1:50133278-50133297 | None:intergenic | 25.0% |
! | AGATTGTCTAAGAAAAGATA+AGG | + | chr3_1:50133459-50133478 | Msa0360660:CDS | 25.0% |
! | AAGTAAAATAGTTGTTTGGT+TGG | - | chr3_1:50133916-50133935 | None:intergenic | 25.0% |
! | AATCTAAAGGATATCATTAG+GGG | - | chr3_1:50134354-50134373 | None:intergenic | 25.0% |
! | GAATCTAAAGGATATCATTA+GGG | - | chr3_1:50134355-50134374 | None:intergenic | 25.0% |
! | AGAATCTAAAGGATATCATT+AGG | - | chr3_1:50134356-50134375 | None:intergenic | 25.0% |
! | CTTGATAAAGTTATAGCATA+TGG | - | chr3_1:50134420-50134439 | None:intergenic | 25.0% |
! | TATGAAATATTATCTGCACA+GGG | + | chr3_1:50134575-50134594 | Msa0360660:intron | 25.0% |
! | AAAACTAGAAGATCTGAAAA+AGG | + | chr3_1:50134826-50134845 | Msa0360660:CDS | 25.0% |
! | AGCATCACAATAATATATAG+TGG | - | chr3_1:50135072-50135091 | None:intergenic | 25.0% |
! | AATCTTAAGGAAAACAGAAA+GGG | - | chr3_1:50135282-50135301 | None:intergenic | 25.0% |
! | TAATCTTAAGGAAAACAGAA+AGG | - | chr3_1:50135283-50135302 | None:intergenic | 25.0% |
!!! | TTTGTCATTTTCTGGTTATA+TGG | + | chr3_1:50135310-50135329 | Msa0360660:intron | 25.0% |
! | TGATATGATAATTCGTGTAA+TGG | - | chr3_1:50135575-50135594 | None:intergenic | 25.0% |
! | AATCTTATGCACCAAAAAAA+GGG | - | chr3_1:50135678-50135697 | None:intergenic | 25.0% |
!! | TATTGGTTGGTTCATATTAA+AGG | - | chr3_1:50135724-50135743 | None:intergenic | 25.0% |
! | GAATGAATAAGGTTAACATT+AGG | - | chr3_1:50135758-50135777 | None:intergenic | 25.0% |
! | ACCTTATTCATTCTACATAA+AGG | + | chr3_1:50135765-50135784 | Msa0360660:intron | 25.0% |
! | CCTTATTCATTCTACATAAA+GGG | + | chr3_1:50135766-50135785 | Msa0360660:intron | 25.0% |
! | TGTTATTATTGAACCAAACT+AGG | + | chr3_1:50135890-50135909 | Msa0360660:intron | 25.0% |
! | TACTCATCTCTTAATTTAGA+AGG | + | chr3_1:50135950-50135969 | Msa0360660:intron | 25.0% |
!! | TCTCTTAATTTAGAAGGTAT+AGG | + | chr3_1:50135956-50135975 | Msa0360660:intron | 25.0% |
!! | CTCTTAATTTAGAAGGTATA+GGG | + | chr3_1:50135957-50135976 | Msa0360660:intron | 25.0% |
!! | TCTTAATTTAGAAGGTATAG+GGG | + | chr3_1:50135958-50135977 | Msa0360660:intron | 25.0% |
!! | TGTCCATAAAATGCTTTAAA+AGG | + | chr3_1:50136007-50136026 | Msa0360660:intron | 25.0% |
!!! | TCTCCTTTTAAAGCATTTTA+TGG | - | chr3_1:50136013-50136032 | None:intergenic | 25.0% |
! | AAGATATATTAGATGTGGTT+GGG | - | chr3_1:50136155-50136174 | None:intergenic | 25.0% |
! | TAAGATATATTAGATGTGGT+TGG | - | chr3_1:50136156-50136175 | None:intergenic | 25.0% |
!! | AGTCTAAGATATATTAGATG+TGG | - | chr3_1:50136160-50136179 | None:intergenic | 25.0% |
! | CTATGTTATTATTGAATGTG+AGG | - | chr3_1:50136387-50136406 | None:intergenic | 25.0% |
! | CATGTAATTTCTTAAAATGG+GGG | + | chr3_1:50136501-50136520 | Msa0360660:intron | 25.0% |
!!! | TTTATTTTGTATCTTGAACC+AGG | - | chr3_1:50136662-50136681 | None:intergenic | 25.0% |
!! | ATCCAAATAATCAGGTTTTT+CGG | + | chr3_1:50137083-50137102 | Msa0360660:intron | 25.0% |
! | ATGATATGAATAGATCTGAT+AGG | + | chr3_1:50137198-50137217 | Msa0360660:intron | 25.0% |
! | TGATATGAATAGATCTGATA+GGG | + | chr3_1:50137199-50137218 | Msa0360660:intron | 25.0% |
!!! | TTTTTTCTATACTTGTCAGA+AGG | - | chr3_1:50137665-50137684 | None:intergenic | 25.0% |
!!! | TTAAAAATCTCTAGAATCCT+TGG | - | chr3_1:50137795-50137814 | None:intergenic | 25.0% |
!! | ACAAAATTAATTGGTCTGTT+TGG | + | chr3_1:50137942-50137961 | Msa0360660:three_prime_UTR | 25.0% |
TCCTCAAAATTTCCAACAAT+TGG | + | chr3_1:50128912-50128931 | Msa0360660:intron | 30.0% | |
! | TCCAATTGTTGGAAATTTTG+AGG | - | chr3_1:50128916-50128935 | None:intergenic | 30.0% |
!! | TGGAATTTTGATCCAATTGT+TGG | - | chr3_1:50128927-50128946 | None:intergenic | 30.0% |
ACAATTGGATCAAAATTCCA+AGG | + | chr3_1:50128927-50128946 | Msa0360660:intron | 30.0% | |
!!! | TAAGTTTTGTGAGAGTGTTT+GGG | - | chr3_1:50129210-50129229 | None:intergenic | 30.0% |
!!! | ATAAGTTTTGTGAGAGTGTT+TGG | - | chr3_1:50129211-50129230 | None:intergenic | 30.0% |
CCATCCATTCTTACTAATTA+AGG | - | chr3_1:50129273-50129292 | None:intergenic | 30.0% | |
CCTTAATTAGTAAGAATGGA+TGG | + | chr3_1:50129270-50129289 | Msa0360660:intron | 30.0% | |
! | AGTGATTTGTGGTGAAAATT+AGG | + | chr3_1:50129385-50129404 | Msa0360660:intron | 30.0% |
!!! | AGGTGAAGTTTTTGAGTTTT+TGG | + | chr3_1:50129432-50129451 | Msa0360660:intron | 30.0% |
!!! | GGTGAAGTTTTTGAGTTTTT+GGG | + | chr3_1:50129433-50129452 | Msa0360660:intron | 30.0% |
!!! | GTGAAGTTTTTGAGTTTTTG+GGG | + | chr3_1:50129434-50129453 | Msa0360660:five_prime_UTR | 30.0% |
!!! | TGAAGTTTTTGAGTTTTTGG+GGG | + | chr3_1:50129435-50129454 | Msa0360660:five_prime_UTR | 30.0% |
TGTTGAATGATGAATCGAAA+CGG | + | chr3_1:50129612-50129631 | Msa0360660:CDS | 30.0% | |
AGCATAGACATTATTTGAAC+TGG | - | chr3_1:50129878-50129897 | None:intergenic | 30.0% | |
GACTATGACAGAAAAAGATT+TGG | + | chr3_1:50129913-50129932 | Msa0360660:CDS | 30.0% | |
TATGACAGAAAAAGATTTGG+AGG | + | chr3_1:50129916-50129935 | Msa0360660:CDS | 30.0% | |
ATGGATGAGAAAGATGTTAA+GGG | + | chr3_1:50130400-50130419 | Msa0360660:CDS | 30.0% | |
! | ATGTTAAGGGCTTTATAACA+AGG | + | chr3_1:50130413-50130432 | Msa0360660:CDS | 30.0% |
! | TGTTAAGGGCTTTATAACAA+GGG | + | chr3_1:50130414-50130433 | Msa0360660:CDS | 30.0% |
! | AAACCTTTAAGGATAAACCT+AGG | - | chr3_1:50131000-50131019 | None:intergenic | 30.0% |
ATGAAAAAGGACTAATATCC+TGG | - | chr3_1:50131172-50131191 | None:intergenic | 30.0% | |
GATTGAAGTCCATATGAAAA+AGG | - | chr3_1:50131185-50131204 | None:intergenic | 30.0% | |
TCCAAAAATTAGTTCCTTCA+CGG | + | chr3_1:50131358-50131377 | Msa0360660:CDS | 30.0% | |
TTACTACATATCCACTATCT+AGG | - | chr3_1:50131724-50131743 | None:intergenic | 30.0% | |
! | GAATTGTTGTTAAGGTATCT+AGG | - | chr3_1:50131817-50131836 | None:intergenic | 30.0% |
CTAAAAAGATAAGTTCTGCT+AGG | + | chr3_1:50131923-50131942 | Msa0360660:intron | 30.0% | |
AGTATCCTTAAACAAAGACT+TGG | + | chr3_1:50132006-50132025 | Msa0360660:intron | 30.0% | |
GAAACATGTTGAGTTACATA+GGG | - | chr3_1:50132219-50132238 | None:intergenic | 30.0% | |
TGAAACATGTTGAGTTACAT+AGG | - | chr3_1:50132220-50132239 | None:intergenic | 30.0% | |
AACATGTTTCAAGAAGTTCT+CGG | + | chr3_1:50132229-50132248 | Msa0360660:intron | 30.0% | |
!!! | TTAAAAACGGGTTACTCTTT+TGG | + | chr3_1:50132284-50132303 | Msa0360660:intron | 30.0% |
!!! | TAAAAACGGGTTACTCTTTT+GGG | + | chr3_1:50132285-50132304 | Msa0360660:intron | 30.0% |
CATGAAATAACCTATGAGTA+TGG | + | chr3_1:50132316-50132335 | Msa0360660:intron | 30.0% | |
!! | ATTTAACTTGAATGGATCTG+GGG | + | chr3_1:50132489-50132508 | Msa0360660:intron | 30.0% |
ACAGTACTTACATAACTTTG+TGG | - | chr3_1:50133120-50133139 | None:intergenic | 30.0% | |
GTCTATCCTATGCAATATAT+AGG | - | chr3_1:50133251-50133270 | None:intergenic | 30.0% | |
! | TTTCTGTCATACCATTTTAC+AGG | + | chr3_1:50133435-50133454 | Msa0360660:intron | 30.0% |
AAATTCTCATTCACTGCAAT+AGG | - | chr3_1:50133499-50133518 | None:intergenic | 30.0% | |
!! | TAACTGGAGTTCTTTTTCAT+GGG | - | chr3_1:50133557-50133576 | None:intergenic | 30.0% |
! | TACTACACTGTTTTATCCTT+TGG | + | chr3_1:50133988-50134007 | Msa0360660:intron | 30.0% |
TGGTATATGCTAGAACATTA+TGG | - | chr3_1:50134043-50134062 | None:intergenic | 30.0% | |
! | AGCATATGGGTTCTTTAAAA+AGG | - | chr3_1:50134406-50134425 | None:intergenic | 30.0% |
AAGGCATGAAAACAATTCTT+CGG | - | chr3_1:50134493-50134512 | None:intergenic | 30.0% | |
! | CGAGTTTTGCATTTACTAAA+GGG | - | chr3_1:50134533-50134552 | None:intergenic | 30.0% |
! | TCGAGTTTTGCATTTACTAA+AGG | - | chr3_1:50134534-50134553 | None:intergenic | 30.0% |
CTATGAAATATTATCTGCAC+AGG | + | chr3_1:50134574-50134593 | Msa0360660:intron | 30.0% | |
!!! | TTTCAGATCTTCTAGTTTTG+AGG | - | chr3_1:50134825-50134844 | None:intergenic | 30.0% |
!!! | TCTTACCTGTTCTTTTTTCT+GGG | - | chr3_1:50135038-50135057 | None:intergenic | 30.0% |
!!! | ATCTTACCTGTTCTTTTTTC+TGG | - | chr3_1:50135039-50135058 | None:intergenic | 30.0% |
TATGACTTGACCATAAGATT+GGG | - | chr3_1:50135219-50135238 | None:intergenic | 30.0% | |
ATATGACTTGACCATAAGAT+TGG | - | chr3_1:50135220-50135239 | None:intergenic | 30.0% | |
TCTGGTTATATGGTTTGATT+TGG | + | chr3_1:50135320-50135339 | Msa0360660:intron | 30.0% | |
! | GAAGTGTTTGTAAATCACTA+TGG | + | chr3_1:50135428-50135447 | Msa0360660:intron | 30.0% |
ACGAATTATCATATCACCAT+GGG | + | chr3_1:50135579-50135598 | Msa0360660:intron | 30.0% | |
GAATCTTATGCACCAAAAAA+AGG | - | chr3_1:50135679-50135698 | None:intergenic | 30.0% | |
ATTAGGATTCACAAGACTAT+TGG | - | chr3_1:50135741-50135760 | None:intergenic | 30.0% | |
CCCTTTATGTAGAATGAATA+AGG | - | chr3_1:50135769-50135788 | None:intergenic | 30.0% | |
CATAAATGAGGCTAACATTA+GGG | - | chr3_1:50135855-50135874 | None:intergenic | 30.0% | |
CTGAACATGTGTTTAAAAGT+GGG | + | chr3_1:50136097-50136116 | Msa0360660:intron | 30.0% | |
TGAACATGTGTTTAAAAGTG+GGG | + | chr3_1:50136098-50136117 | Msa0360660:intron | 30.0% | |
! | CAAAATTGACTCATGAATAG+TGG | - | chr3_1:50136188-50136207 | None:intergenic | 30.0% |
! | CACTATTCATGAGTCAATTT+TGG | + | chr3_1:50136186-50136205 | Msa0360660:intron | 30.0% |
! | ATTCATGAGTCAATTTTGGA+AGG | + | chr3_1:50136190-50136209 | Msa0360660:intron | 30.0% |
GAATAGCTGATGTAGTATAT+TGG | - | chr3_1:50136436-50136455 | None:intergenic | 30.0% | |
GATTCTATTGAACTTATGAG+AGG | + | chr3_1:50136523-50136542 | Msa0360660:intron | 30.0% | |
! | ATTATACTTCAAGAGTTGGT+AGG | - | chr3_1:50136550-50136569 | None:intergenic | 30.0% |
GAAGATTATACTTCAAGAGT+TGG | - | chr3_1:50136554-50136573 | None:intergenic | 30.0% | |
AAAGAATTGTGAAGATCTAC+TGG | - | chr3_1:50136832-50136851 | None:intergenic | 30.0% | |
TATAAATTGATGAGTCTGAG+AGG | + | chr3_1:50137056-50137075 | Msa0360660:intron | 30.0% | |
GGTATACAAACAAAATCGAA+AGG | + | chr3_1:50137113-50137132 | Msa0360660:intron | 30.0% | |
TCAGATCTATTCATATCATG+TGG | - | chr3_1:50137197-50137216 | None:intergenic | 30.0% | |
TTTGATATAAAAGCAAGGGA+TGG | - | chr3_1:50137310-50137329 | None:intergenic | 30.0% | |
! | TACTTAAATTAGCCTCATGA+GGG | - | chr3_1:50137743-50137762 | None:intergenic | 30.0% |
! | ATCAAGCATTTTTACCACTT+AGG | - | chr3_1:50137885-50137904 | None:intergenic | 30.0% |
TGATTTATGTACGTAGTATG+TGG | + | chr3_1:50137901-50137920 | Msa0360660:three_prime_UTR | 30.0% | |
AATCGTTCGCTTTGATTCAA+TGG | - | chr3_1:50128739-50128758 | None:intergenic | 35.0% | |
TGAGGAAAAATTAAGTGGGT+GGG | - | chr3_1:50128898-50128917 | None:intergenic | 35.0% | |
TTGAGGAAAAATTAAGTGGG+TGG | - | chr3_1:50128899-50128918 | None:intergenic | 35.0% | |
TCAAATAAGCCAATCCAAAC+AGG | + | chr3_1:50129246-50129265 | Msa0360660:intron | 35.0% | |
TTACTAATTAAGGGCCTGTT+TGG | - | chr3_1:50129263-50129282 | None:intergenic | 35.0% | |
AGGCCCTTAATTAGTAAGAA+TGG | + | chr3_1:50129266-50129285 | Msa0360660:intron | 35.0% | |
TAGTAAGAATGGATGGAGTT+TGG | + | chr3_1:50129277-50129296 | Msa0360660:intron | 35.0% | |
TGTGGTGAAAATTAGGTTTC+TGG | + | chr3_1:50129392-50129411 | Msa0360660:intron | 35.0% | |
GTGGTGAAAATTAGGTTTCT+GGG | + | chr3_1:50129393-50129412 | Msa0360660:intron | 35.0% | |
!! | TGGGCTGATTTTGAGTAATT+AGG | + | chr3_1:50129412-50129431 | Msa0360660:intron | 35.0% |
GTGAAGTAGATTGTGTGAAT+TGG | + | chr3_1:50129463-50129482 | Msa0360660:five_prime_UTR | 35.0% | |
GTAGATTGTGTGAATTGGAT+TGG | + | chr3_1:50129468-50129487 | Msa0360660:five_prime_UTR | 35.0% | |
! | AAAGTGAGTTGAAATGAGTG+TGG | + | chr3_1:50129523-50129542 | Msa0360660:exon | 35.0% |
GTTGAATGATGAATCGAAAC+GGG | + | chr3_1:50129613-50129632 | Msa0360660:CDS | 35.0% | |
AAATCTCTTCACTTGCGATA+TGG | - | chr3_1:50129726-50129745 | None:intergenic | 35.0% | |
TCGCAAGTGAAGAGATTTAT+AGG | + | chr3_1:50129728-50129747 | Msa0360660:CDS | 35.0% | |
AAGTGAAGAGATTTATAGGC+AGG | + | chr3_1:50129732-50129751 | Msa0360660:CDS | 35.0% | |
ATTTATAGGCAGGAGATTTC+TGG | + | chr3_1:50129742-50129761 | Msa0360660:CDS | 35.0% | |
! | TTCAGATCCTTTTCCATATC+AGG | - | chr3_1:50129770-50129789 | None:intergenic | 35.0% |
! | TACTTTCACATGCTTTTGAC+AGG | + | chr3_1:50130194-50130213 | Msa0360660:CDS | 35.0% |
TGATGTGTATTCTAATGCCA+AGG | + | chr3_1:50130291-50130310 | Msa0360660:CDS | 35.0% | |
ATCAGACACTCGATATTTAG+CGG | - | chr3_1:50130382-50130401 | None:intergenic | 35.0% | |
GATGGATGAGAAAGATGTTA+AGG | + | chr3_1:50130399-50130418 | Msa0360660:CDS | 35.0% | |
GAATTTGAGAATCTTGCATC+TGG | + | chr3_1:50130439-50130458 | Msa0360660:CDS | 35.0% | |
GAATCTTGCATCTGGATTAT+TGG | + | chr3_1:50130447-50130466 | Msa0360660:CDS | 35.0% | |
TCAATTAATGCTTCGTTGCA+AGG | - | chr3_1:50130487-50130506 | None:intergenic | 35.0% | |
! | AACGAAGCATTAATTGAAGC+AGG | + | chr3_1:50130490-50130509 | Msa0360660:CDS | 35.0% |
GATAATAATGTACTCACTGC+TGG | - | chr3_1:50130571-50130590 | None:intergenic | 35.0% | |
ACTCACTTGCATTCAACTTT+CGG | - | chr3_1:50130618-50130637 | None:intergenic | 35.0% | |
TTAGAGCCCATGTTGTTAAA+TGG | + | chr3_1:50130760-50130779 | Msa0360660:intron | 35.0% | |
TCGCTTCCATTTAACAACAT+GGG | - | chr3_1:50130769-50130788 | None:intergenic | 35.0% | |
ATCGCTTCCATTTAACAACA+TGG | - | chr3_1:50130770-50130789 | None:intergenic | 35.0% | |
ATGTTGTTAAATGGAAGCGA+TGG | + | chr3_1:50130769-50130788 | Msa0360660:intron | 35.0% | |
TGTTGTTAAATGGAAGCGAT+GGG | + | chr3_1:50130770-50130789 | Msa0360660:intron | 35.0% | |
TGCCATATGCAATTTGTGAA+GGG | + | chr3_1:50130833-50130852 | Msa0360660:intron | 35.0% | |
ATCCCTTCACAAATTGCATA+TGG | - | chr3_1:50130838-50130857 | None:intergenic | 35.0% | |
CAGCAAAAAAGTAATAGCAG+TGG | - | chr3_1:50131046-50131065 | None:intergenic | 35.0% | |
GCAATTTCTCATGTTTGTTC+AGG | + | chr3_1:50131145-50131164 | Msa0360660:intron | 35.0% | |
!! | CTAATTTTTGGAAACGTTCC+AGG | - | chr3_1:50131350-50131369 | None:intergenic | 35.0% |
! | ACCGTGAAGGAACTAATTTT+TGG | - | chr3_1:50131362-50131381 | None:intergenic | 35.0% |
AGTGGATATGTAGTAAGACA+TGG | + | chr3_1:50131728-50131747 | Msa0360660:intron | 35.0% | |
GTGGATATGTAGTAAGACAT+GGG | + | chr3_1:50131729-50131748 | Msa0360660:intron | 35.0% | |
TATGTAGTAAGACATGGGTA+TGG | + | chr3_1:50131734-50131753 | Msa0360660:intron | 35.0% | |
TAGAAGAACTGAGATGTTTC+AGG | + | chr3_1:50131971-50131990 | Msa0360660:intron | 35.0% | |
TTTGTTTAAGGATACTCCTC+GGG | - | chr3_1:50132002-50132021 | None:intergenic | 35.0% | |
! | CTTTGTTTAAGGATACTCCT+CGG | - | chr3_1:50132003-50132022 | None:intergenic | 35.0% |
! | TCAGACCAAGTCTTTGTTTA+AGG | - | chr3_1:50132014-50132033 | None:intergenic | 35.0% |
ACATGTTTCAAGAAGTTCTC+GGG | + | chr3_1:50132230-50132249 | Msa0360660:intron | 35.0% | |
ATAACCTATGAGTATGGTGT+CGG | + | chr3_1:50132322-50132341 | Msa0360660:intron | 35.0% | |
GTATAGACTTCATTGCTATG+AGG | + | chr3_1:50132547-50132566 | Msa0360660:intron | 35.0% | |
! | CATCTATAGAAAGCTGATTC+TGG | - | chr3_1:50132645-50132664 | None:intergenic | 35.0% |
TGTGCACTTTCTTTGCTAAA+AGG | + | chr3_1:50132663-50132682 | Msa0360660:intron | 35.0% | |
GAATCAATAGCACAAGAATG+TGG | - | chr3_1:50132710-50132729 | None:intergenic | 35.0% | |
! | TTGACCACTTCTTTTCAGAT+CGG | + | chr3_1:50132779-50132798 | Msa0360660:intron | 35.0% |
TTGATTCAGCTACAGTAAGT+AGG | + | chr3_1:50132879-50132898 | Msa0360660:intron | 35.0% | |
AACAGAATTGGTACTATCTG+AGG | - | chr3_1:50133058-50133077 | None:intergenic | 35.0% | |
TTGTGGAGAATCACACTTAT+TGG | - | chr3_1:50133103-50133122 | None:intergenic | 35.0% | |
AGAGTTAAGTCACTTAAGCA+GGG | - | chr3_1:50133152-50133171 | None:intergenic | 35.0% | |
AAGAGTTAAGTCACTTAAGC+AGG | - | chr3_1:50133153-50133172 | None:intergenic | 35.0% | |
TAGACAATCTGCCTGTAAAA+TGG | - | chr3_1:50133449-50133468 | None:intergenic | 35.0% | |
GCAGTGAATGAGAATTTCTA+TGG | + | chr3_1:50133502-50133521 | Msa0360660:CDS | 35.0% | |
GTGAATGAGAATTTCTATGG+TGG | + | chr3_1:50133505-50133524 | Msa0360660:CDS | 35.0% | |
! | TTTCTATGGTGGAATGACAA+TGG | + | chr3_1:50133516-50133535 | Msa0360660:CDS | 35.0% |
!! | CTAACTGGAGTTCTTTTTCA+TGG | - | chr3_1:50133558-50133577 | None:intergenic | 35.0% |
!! | CAAGGTGTTCTTCTTTTCTT+TGG | - | chr3_1:50133608-50133627 | None:intergenic | 35.0% |
CAAAGAAAAGAAGAACACCT+TGG | + | chr3_1:50133606-50133625 | Msa0360660:CDS | 35.0% | |
! | TGTTTCAGATCAAGTGTTGT+CGG | + | chr3_1:50133823-50133842 | Msa0360660:intron | 35.0% |
ATGTTGTTGTGTGAATCCAA+AGG | - | chr3_1:50134007-50134026 | None:intergenic | 35.0% | |
AGATCTAGAGATCAATGAGT+TGG | - | chr3_1:50134075-50134094 | None:intergenic | 35.0% | |
AAATGTTATGTGGGGTAAGA+TGG | - | chr3_1:50134198-50134217 | None:intergenic | 35.0% | |
! | AGGAAGTGCAAATGTTATGT+GGG | - | chr3_1:50134207-50134226 | None:intergenic | 35.0% |
! | AAGGAAGTGCAAATGTTATG+TGG | - | chr3_1:50134208-50134227 | None:intergenic | 35.0% |
ATAACATTTGCACTTCCTTG+TGG | + | chr3_1:50134209-50134228 | Msa0360660:intron | 35.0% | |
!!! | TTCCAACACAAGGTTTTAGA+GGG | - | chr3_1:50134248-50134267 | None:intergenic | 35.0% |
ACTTGAAGGGTGAAAAACAA+CGG | - | chr3_1:50134274-50134293 | None:intergenic | 35.0% | |
AAAGGATATCATTAGGGGTT+AGG | - | chr3_1:50134349-50134368 | None:intergenic | 35.0% | |
!!! | AGTAAAGTGGAAGTTTTGAG+TGG | + | chr3_1:50134438-50134457 | Msa0360660:intron | 35.0% |
AACAGCTCTTCAACACATAT+CGG | + | chr3_1:50134696-50134715 | Msa0360660:intron | 35.0% | |
CAGCTACAGAAATAGTAGAT+TGG | - | chr3_1:50134906-50134925 | None:intergenic | 35.0% | |
!! | CAATCTACTATTTCTGTAGC+TGG | + | chr3_1:50134904-50134923 | Msa0360660:intron | 35.0% |
TCTTTGTACCGAATCTCAAT+TGG | - | chr3_1:50134935-50134954 | None:intergenic | 35.0% | |
!!! | CTTACCTGTTCTTTTTTCTG+GGG | - | chr3_1:50135037-50135056 | None:intergenic | 35.0% |
GAACAGGTAAGATAAATAGC+AGG | + | chr3_1:50135046-50135065 | Msa0360660:intron | 35.0% | |
! | TCATATTAAGAGCGCAATAG+AGG | + | chr3_1:50135234-50135253 | Msa0360660:CDS | 35.0% |
!! | ACATCTAGCATTTTGACAGT+AGG | - | chr3_1:50135541-50135560 | None:intergenic | 35.0% |
CACGAATTATCATATCACCA+TGG | + | chr3_1:50135578-50135597 | Msa0360660:intron | 35.0% | |
AGGAAATTGAAGGAGATGAT+AGG | - | chr3_1:50135704-50135723 | None:intergenic | 35.0% | |
ATTAGGGTTCACAATGCTAA+TGG | - | chr3_1:50135839-50135858 | None:intergenic | 35.0% | |
GCATAAATGAGGCTAACATT+AGG | - | chr3_1:50135856-50135875 | None:intergenic | 35.0% | |
CTCTTGATGTAGCATAAATG+AGG | - | chr3_1:50135867-50135886 | None:intergenic | 35.0% | |
CTCATTTATGCTACATCAAG+AGG | + | chr3_1:50135865-50135884 | Msa0360660:intron | 35.0% | |
GATCCCCTATTATTACTGAA+GGG | - | chr3_1:50135986-50136005 | None:intergenic | 35.0% | |
AGATCCCCTATTATTACTGA+AGG | - | chr3_1:50135987-50136006 | None:intergenic | 35.0% | |
! | AATGAGGGACTCTTTTAACA+TGG | - | chr3_1:50136063-50136082 | None:intergenic | 35.0% |
ATGTTAAAAGAGTCCCTCAT+TGG | + | chr3_1:50136062-50136081 | Msa0360660:intron | 35.0% | |
!! | CCACTTTTAAACACATGTTC+AGG | - | chr3_1:50136099-50136118 | None:intergenic | 35.0% |
CCTGAACATGTGTTTAAAAG+TGG | + | chr3_1:50136096-50136115 | Msa0360660:intron | 35.0% | |
GAACATGTGTTTAAAAGTGG+GGG | + | chr3_1:50136099-50136118 | Msa0360660:intron | 35.0% | |
TTTGGAAGGAGTTACTCAAA+TGG | + | chr3_1:50136204-50136223 | Msa0360660:intron | 35.0% | |
TTGGAAGGAGTTACTCAAAT+GGG | + | chr3_1:50136205-50136224 | Msa0360660:intron | 35.0% | |
TAGTATATTGGCAAGGAATG+AGG | - | chr3_1:50136424-50136443 | None:intergenic | 35.0% | |
TTACATGATAGTCCCTTAAG+AGG | - | chr3_1:50136488-50136507 | None:intergenic | 35.0% | |
!!! | CAAAGTTTTGAAGTGCATAG+GGG | - | chr3_1:50136581-50136600 | None:intergenic | 35.0% |
!!! | CCAAAGTTTTGAAGTGCATA+GGG | - | chr3_1:50136582-50136601 | None:intergenic | 35.0% |
!!! | ACCAAAGTTTTGAAGTGCAT+AGG | - | chr3_1:50136583-50136602 | None:intergenic | 35.0% |
! | TTGGTGAGTACGACTTTTTA+TGG | + | chr3_1:50136598-50136617 | Msa0360660:intron | 35.0% |
AGTTCCACTCATAAAAGACA+TGG | - | chr3_1:50136717-50136736 | None:intergenic | 35.0% | |
! | ACAATTCTTTTCGACGTTCT+AGG | + | chr3_1:50136842-50136861 | Msa0360660:intron | 35.0% |
ATGCATCATCTATGTTTGTG+AGG | + | chr3_1:50136910-50136929 | Msa0360660:intron | 35.0% | |
TGCATCATCTATGTTTGTGA+GGG | + | chr3_1:50136911-50136930 | Msa0360660:intron | 35.0% | |
GAGGATCTATCCAAATAATC+AGG | + | chr3_1:50137075-50137094 | Msa0360660:intron | 35.0% | |
CTCCGAAAAACCTGATTATT+TGG | - | chr3_1:50137088-50137107 | None:intergenic | 35.0% | |
! | AAGCAATGTTTTACAGAAGC+AGG | - | chr3_1:50137258-50137277 | None:intergenic | 35.0% |
TCAATGTATTCACGGATGAT+TGG | - | chr3_1:50137461-50137480 | None:intergenic | 35.0% | |
! | ACTATGTTGTCAGAAGGTAT+CGG | - | chr3_1:50137522-50137541 | None:intergenic | 35.0% |
GATTTCACTATGTTGTCAGA+AGG | - | chr3_1:50137528-50137547 | None:intergenic | 35.0% | |
TCAATGTATTCACGGATGAT+TGG | - | chr3_1:50137461-50137480 | None:intergenic | 35.0% | |
! | CTATACTTGTCAGAAGGTAT+CGG | - | chr3_1:50137659-50137678 | None:intergenic | 35.0% |
! | ACTTAAATTAGCCTCATGAG+GGG | - | chr3_1:50137742-50137761 | None:intergenic | 35.0% |
! | GTACTTAAATTAGCCTCATG+AGG | - | chr3_1:50137744-50137763 | None:intergenic | 35.0% |
!! | AAAATCTCTAGAATCCTTGG+AGG | - | chr3_1:50137792-50137811 | None:intergenic | 35.0% |
TCAAATAGGTTATGCCTAAG+TGG | + | chr3_1:50137868-50137887 | Msa0360660:three_prime_UTR | 35.0% | |
AATTAAGGGCCTGTTTGGAT+TGG | - | chr3_1:50129258-50129277 | None:intergenic | 40.0% | |
! | TGAGTTGAAATGAGTGTGGT+AGG | + | chr3_1:50129527-50129546 | Msa0360660:exon | 40.0% |
GAGTTGAAATGAGTGTGGTA+GGG | + | chr3_1:50129528-50129547 | Msa0360660:exon | 40.0% | |
! | TGAGAACTGTGTTATTGCTG+TGG | + | chr3_1:50129565-50129584 | Msa0360660:CDS | 40.0% |
! | CTTGCGATATGGTTGACTTT+GGG | - | chr3_1:50129715-50129734 | None:intergenic | 40.0% |
! | ACTTGCGATATGGTTGACTT+TGG | - | chr3_1:50129716-50129735 | None:intergenic | 40.0% |
! | GAGATTTCTGGATCCTGATA+TGG | + | chr3_1:50129754-50129773 | Msa0360660:CDS | 40.0% |
TCTGGATCCTGATATGGAAA+AGG | + | chr3_1:50129760-50129779 | Msa0360660:CDS | 40.0% | |
TCCCTCTTGAAACTTCTCAA+GGG | + | chr3_1:50129795-50129814 | Msa0360660:CDS | 40.0% | |
CCAATAACACAATCCGAGAT+GGG | - | chr3_1:50129944-50129963 | None:intergenic | 40.0% | |
ACCAATAACACAATCCGAGA+TGG | - | chr3_1:50129945-50129964 | None:intergenic | 40.0% | |
ACTGCAACTGCTCTTAGTTA+TGG | + | chr3_1:50130058-50130077 | Msa0360660:CDS | 40.0% | |
! | ATGCTTTTGACAGGAGCTTA+GGG | + | chr3_1:50130203-50130222 | Msa0360660:CDS | 40.0% |
!!! | AGTTTTGAGTGCAAATCCAG+AGG | + | chr3_1:50130354-50130373 | Msa0360660:CDS | 40.0% |
GCTAAATATCGAGTGTCTGA+TGG | + | chr3_1:50130381-50130400 | Msa0360660:CDS | 40.0% | |
AGCATTAATTGAAGCAGGCT+TGG | + | chr3_1:50130495-50130514 | Msa0360660:CDS | 40.0% | |
TGCAGAGAAGATTTCTTCTG+TGG | + | chr3_1:50130519-50130538 | Msa0360660:CDS | 40.0% | |
ATTTCTTCTGTGGAGCTAGT+TGG | + | chr3_1:50130529-50130548 | Msa0360660:CDS | 40.0% | |
GTTGTTAAATGGAAGCGATG+GGG | + | chr3_1:50130771-50130790 | Msa0360660:intron | 40.0% | |
TCACAAATTGCATATGGCAG+TGG | - | chr3_1:50130832-50130851 | None:intergenic | 40.0% | |
CTGCCATATGCAATTTGTGA+AGG | + | chr3_1:50130832-50130851 | Msa0360660:intron | 40.0% | |
CATCGACAACACTGATCATT+GGG | + | chr3_1:50130920-50130939 | Msa0360660:intron | 40.0% | |
AAAAAACCAAGTTGCTGCCT+AGG | + | chr3_1:50130980-50130999 | Msa0360660:intron | 40.0% | |
CTGCCTAGGTTTATCCTTAA+AGG | + | chr3_1:50130994-50131013 | Msa0360660:intron | 40.0% | |
CGAATTTCTGATAGACCAGA+TGG | + | chr3_1:50131215-50131234 | Msa0360660:CDS | 40.0% | |
! | TTTGGGAAAAGTACACCATC+TGG | - | chr3_1:50131233-50131252 | None:intergenic | 40.0% |
! | GATGGTGTACTTTTCCCAAA+AGG | + | chr3_1:50131233-50131252 | Msa0360660:CDS | 40.0% |
! | TTGGAATGAGATGGCCTTTT+GGG | - | chr3_1:50131250-50131269 | None:intergenic | 40.0% |
!! | ACAAATCAGTTGGCTTGGAT+GGG | - | chr3_1:50131286-50131305 | None:intergenic | 40.0% |
TCCAAATGGGACAAATCAGT+TGG | - | chr3_1:50131296-50131315 | None:intergenic | 40.0% | |
TGCGTAGAAAGCTTCCAAAT+GGG | - | chr3_1:50131309-50131328 | None:intergenic | 40.0% | |
TTGCGTAGAAAGCTTCCAAA+TGG | - | chr3_1:50131310-50131329 | None:intergenic | 40.0% | |
AATGAACATGAACTACCACC+TGG | + | chr3_1:50131329-50131348 | Msa0360660:CDS | 40.0% | |
!! | ATTTTTGGAAACGTTCCAGG+TGG | - | chr3_1:50131347-50131366 | None:intergenic | 40.0% |
CAATAACTAACAAGGAAGGG+GGG | - | chr3_1:50131470-50131489 | None:intergenic | 40.0% | |
GCAATAACTAACAAGGAAGG+GGG | - | chr3_1:50131471-50131490 | None:intergenic | 40.0% | |
CGCAATAACTAACAAGGAAG+GGG | - | chr3_1:50131472-50131491 | None:intergenic | 40.0% | |
GCGCAATAACTAACAAGGAA+GGG | - | chr3_1:50131473-50131492 | None:intergenic | 40.0% | |
TGCGCAATAACTAACAAGGA+AGG | - | chr3_1:50131474-50131493 | None:intergenic | 40.0% | |
AGCATGCGCAATAACTAACA+AGG | - | chr3_1:50131478-50131497 | None:intergenic | 40.0% | |
AAGCTATGAAGCCTAGATAG+TGG | + | chr3_1:50131710-50131729 | Msa0360660:intron | 40.0% | |
ACGGAGTATGCTTGTAAAGA+GGG | + | chr3_1:50131864-50131883 | Msa0360660:intron | 40.0% | |
CATGTTTCAAGAAGTTCTCG+GGG | + | chr3_1:50132231-50132250 | Msa0360660:intron | 40.0% | |
! | TATGAGTATGGTGTCGGATA+CGG | + | chr3_1:50132328-50132347 | Msa0360660:intron | 40.0% |
AGCTTATAGACTATGAAGCC+TGG | - | chr3_1:50132400-50132419 | None:intergenic | 40.0% | |
CCTAATTCAGAAATAGGGTG+AGG | - | chr3_1:50132528-50132547 | None:intergenic | 40.0% | |
!! | CCTCACCCTATTTCTGAATT+AGG | + | chr3_1:50132525-50132544 | Msa0360660:intron | 40.0% |
TACATTACCTGCATGCATAC+AGG | + | chr3_1:50132734-50132753 | Msa0360660:intron | 40.0% | |
ATAACAACCTGTATGCATGC+AGG | - | chr3_1:50132744-50132763 | None:intergenic | 40.0% | |
CGAGTTCAACTAAATCTGCA+TGG | + | chr3_1:50132845-50132864 | Msa0360660:CDS | 40.0% | |
ATTCAGCTACAGTAAGTAGG+AGG | + | chr3_1:50132882-50132901 | Msa0360660:intron | 40.0% | |
! | GTCATGCACAAACTTTTGTG+TGG | + | chr3_1:50132956-50132975 | Msa0360660:intron | 40.0% |
! | ATTGGTACTATCTGAGGTCT+CGG | - | chr3_1:50133052-50133071 | None:intergenic | 40.0% |
AGTACCAATTCTGTTGCCAA+TGG | + | chr3_1:50133063-50133082 | Msa0360660:CDS | 40.0% | |
GAAAAGATAAGGCGAACAGA+AGG | + | chr3_1:50133470-50133489 | Msa0360660:CDS | 40.0% | |
!!! | AGATCAAGTGTTGTCGGTTT+TGG | + | chr3_1:50133829-50133848 | Msa0360660:intron | 40.0% |
! | CAATGAGTTGGCTAGAGATA+TGG | - | chr3_1:50134063-50134082 | None:intergenic | 40.0% |
! | GGAAGTGCAAATGTTATGTG+GGG | - | chr3_1:50134206-50134225 | None:intergenic | 40.0% |
!!! | GGTTTTAGAGGGAGGTTTTT+GGG | - | chr3_1:50134237-50134256 | None:intergenic | 40.0% |
!!! | AGGTTTTAGAGGGAGGTTTT+TGG | - | chr3_1:50134238-50134257 | None:intergenic | 40.0% |
!! | CTTCCAACACAAGGTTTTAG+AGG | - | chr3_1:50134249-50134268 | None:intergenic | 40.0% |
!! | ATCAAGTGCTGACACTTGAA+GGG | - | chr3_1:50134287-50134306 | None:intergenic | 40.0% |
GAAGAGAAGAATCCACAGTA+GGG | - | chr3_1:50134318-50134337 | None:intergenic | 40.0% | |
TTTACTAAAGGGTCGTGAGT+CGG | - | chr3_1:50134522-50134541 | None:intergenic | 40.0% | |
TAGATATGACATCCCTCTCT+TGG | - | chr3_1:50134736-50134755 | None:intergenic | 40.0% | |
AAGAGAGGGATGTCATATCT+AGG | + | chr3_1:50134735-50134754 | Msa0360660:CDS | 40.0% | |
!! | TCTACTATTTCTGTAGCTGG+TGG | + | chr3_1:50134907-50134926 | Msa0360660:intron | 40.0% |
! | TGGTGGATCCAATTGAGATT+CGG | + | chr3_1:50134924-50134943 | Msa0360660:CDS | 40.0% |
!!! | TTCTTTTTTCTGGGGTGGAA+CGG | - | chr3_1:50135029-50135048 | None:intergenic | 40.0% |
TTAGCAATGAAGCAGAGCAT+TGG | + | chr3_1:50135146-50135165 | Msa0360660:CDS | 40.0% | |
AAGATTGGGTCGACATTCTT+AGG | - | chr3_1:50135205-50135224 | None:intergenic | 40.0% | |
AGAATGTCGACCCAATCTTA+TGG | + | chr3_1:50135206-50135225 | Msa0360660:CDS | 40.0% | |
GAGACAAATCACCTCATAAC+TGG | + | chr3_1:50135491-50135510 | Msa0360660:intron | 40.0% | |
! | CTCACATGACATCTTTTGCT+TGG | + | chr3_1:50135605-50135624 | Msa0360660:intron | 40.0% |
GGATTCACAAGACTATTGGT+TGG | - | chr3_1:50135737-50135756 | None:intergenic | 40.0% | |
GAGTAGAATGACAGAGCAAA+GGG | - | chr3_1:50135935-50135954 | None:intergenic | 40.0% | |
TGAGTAGAATGACAGAGCAA+AGG | - | chr3_1:50135936-50135955 | None:intergenic | 40.0% | |
GGTGCCCTTCAGTAATAATA+GGG | + | chr3_1:50135979-50135998 | Msa0360660:intron | 40.0% | |
GTGCCCTTCAGTAATAATAG+GGG | + | chr3_1:50135980-50135999 | Msa0360660:intron | 40.0% | |
AAGGAGTTACTCAAATGGGT+GGG | + | chr3_1:50136209-50136228 | Msa0360660:intron | 40.0% | |
! | TATCTCAGCCCAAACCTTTT+TGG | + | chr3_1:50136298-50136317 | Msa0360660:intron | 40.0% |
! | ATCTCAGCCCAAACCTTTTT+GGG | + | chr3_1:50136299-50136318 | Msa0360660:intron | 40.0% |
GCCAATTCCCAAAAAGGTTT+GGG | - | chr3_1:50136309-50136328 | None:intergenic | 40.0% | |
TGCCAATTCCCAAAAAGGTT+TGG | - | chr3_1:50136310-50136329 | None:intergenic | 40.0% | |
!! | ACCTTTTTGGGAATTGGCAA+AGG | + | chr3_1:50136311-50136330 | Msa0360660:intron | 40.0% |
ACCTTTGCCAATTCCCAAAA+AGG | - | chr3_1:50136315-50136334 | None:intergenic | 40.0% | |
!! | AGGTGCTGACTATATTTCTC+TGG | + | chr3_1:50136357-50136376 | Msa0360660:intron | 40.0% |
GCTGATGTAGTATATTGGCA+AGG | - | chr3_1:50136431-50136450 | None:intergenic | 40.0% | |
!!! | TTTTGAAGTGCATAGGGGAA+GGG | - | chr3_1:50136576-50136595 | None:intergenic | 40.0% |
CCCTATGCACTTCAAAACTT+TGG | + | chr3_1:50136579-50136598 | Msa0360660:intron | 40.0% | |
GTCTATGAGAGGAGAGTTTA+TGG | - | chr3_1:50136636-50136655 | None:intergenic | 40.0% | |
! | GCAACCATGTCTTTTATGAG+TGG | + | chr3_1:50136710-50136729 | Msa0360660:intron | 40.0% |
!! | TTTGTGAGGGAGTGTTGATA+GGG | + | chr3_1:50136924-50136943 | Msa0360660:intron | 40.0% |
!! | ATCAGGTTTTTCGGAGTTGA+TGG | + | chr3_1:50137092-50137111 | Msa0360660:intron | 40.0% |
TGCACAACATAGTGAAATCC+AGG | + | chr3_1:50137365-50137384 | Msa0360660:CDS | 40.0% | |
TTGTCATCTTCGTCTTCTGA+AGG | - | chr3_1:50137394-50137413 | None:intergenic | 40.0% | |
TCTTTGTCATCTTCGTCTTC+TGG | - | chr3_1:50137397-50137416 | None:intergenic | 40.0% | |
CGAAGATGACAAAGACAAGT+TGG | + | chr3_1:50137429-50137448 | Msa0360660:CDS | 40.0% | |
CATCCGTGAATACATTGATG+AGG | + | chr3_1:50137463-50137482 | Msa0360660:exon | 40.0% | |
CTGACAACATAGTGAAATCC+AGG | + | chr3_1:50137529-50137548 | Msa0360660:intron | 40.0% | |
TTGTCATCTTCGTCTTCTGA+AGG | - | chr3_1:50137394-50137413 | None:intergenic | 40.0% | |
CGAAGATGACAAAGACAAGT+TGG | + | chr3_1:50137429-50137448 | Msa0360660:CDS | 40.0% | |
CATCCGTGAATACATTGATG+AGG | + | chr3_1:50137463-50137482 | Msa0360660:exon | 40.0% | |
! | CTTAAATTAGCCTCATGAGG+GGG | - | chr3_1:50137741-50137760 | None:intergenic | 40.0% |
AGAATCCTTGGAGGAACAAA+TGG | - | chr3_1:50137783-50137802 | None:intergenic | 40.0% | |
! | CTTGTGAATGGTGACGATTG+CGG | - | chr3_1:50128780-50128799 | None:intergenic | 45.0% |
AGTGTGGTAGGGTTTGACAT+TGG | + | chr3_1:50129539-50129558 | Msa0360660:CDS | 45.0% | |
CTCCCTCTTGAAACTTCTCA+AGG | + | chr3_1:50129794-50129813 | Msa0360660:CDS | 45.0% | |
GCCCTTGAGAAGTTTCAAGA+GGG | - | chr3_1:50129799-50129818 | None:intergenic | 45.0% | |
TCTTGAAACTTCTCAAGGGC+CGG | + | chr3_1:50129799-50129818 | Msa0360660:CDS | 45.0% | |
TGAAACAAAACGCCACCATC+CGG | - | chr3_1:50129821-50129840 | None:intergenic | 45.0% | |
!! | AGATTTGGAGGTACCCATCT+CGG | + | chr3_1:50129928-50129947 | Msa0360660:CDS | 45.0% |
CCCATCTCGGATTGTGTTAT+TGG | + | chr3_1:50129941-50129960 | Msa0360660:CDS | 45.0% | |
GCAAGTCGGTGAAGTATGAT+GGG | - | chr3_1:50129970-50129989 | None:intergenic | 45.0% | |
TGCAAGTCGGTGAAGTATGA+TGG | - | chr3_1:50129971-50129990 | None:intergenic | 45.0% | |
TTGACGCGGCAATAATTGCT+GGG | + | chr3_1:50130005-50130024 | Msa0360660:CDS | 45.0% | |
CAGTCGTGTATCAGTCTCAA+AGG | - | chr3_1:50130037-50130056 | None:intergenic | 45.0% | |
! | TGCATTGCAGCGTTTGAGTT+TGG | + | chr3_1:50130160-50130179 | Msa0360660:CDS | 45.0% |
! | GCATTGCAGCGTTTGAGTTT+GGG | + | chr3_1:50130161-50130180 | Msa0360660:CDS | 45.0% |
! | CGTTTGAGTTTGGGCAAATG+AGG | + | chr3_1:50130170-50130189 | Msa0360660:CDS | 45.0% |
! | CATGCTTTTGACAGGAGCTT+AGG | + | chr3_1:50130202-50130221 | Msa0360660:CDS | 45.0% |
! | TGCTTTTGACAGGAGCTTAG+GGG | + | chr3_1:50130204-50130223 | Msa0360660:CDS | 45.0% |
CTAATGCCAAGGCTTGCATT+AGG | + | chr3_1:50130302-50130321 | Msa0360660:CDS | 45.0% | |
! | AGCTAGTTGGTTCAGGTTCT+AGG | + | chr3_1:50130542-50130561 | Msa0360660:CDS | 45.0% |
CTTGCATTCAACTTTCGGCT+CGG | - | chr3_1:50130613-50130632 | None:intergenic | 45.0% | |
TATTCTCGCACACGGTATGT+GGG | - | chr3_1:50130682-50130701 | None:intergenic | 45.0% | |
AAACCTCGTATTCTCGCACA+CGG | - | chr3_1:50130690-50130709 | None:intergenic | 45.0% | |
TTTGTGAAGGGATCTCACCA+TGG | + | chr3_1:50130845-50130864 | Msa0360660:intron | 45.0% | |
AAACATGCCATTGCAGCCTA+TGG | - | chr3_1:50130876-50130895 | None:intergenic | 45.0% | |
GCTGCAATGGCATGTTTATG+TGG | + | chr3_1:50130879-50130898 | Msa0360660:intron | 45.0% | |
ATGATCAGTGTTGTCGATGG+CGG | - | chr3_1:50130919-50130938 | None:intergenic | 45.0% | |
CCAATGATCAGTGTTGTCGA+TGG | - | chr3_1:50130922-50130941 | None:intergenic | 45.0% | |
CCATCGACAACACTGATCAT+TGG | + | chr3_1:50130919-50130938 | Msa0360660:intron | 45.0% | |
GATAAACCTAGGCAGCAACT+TGG | - | chr3_1:50130989-50131008 | None:intergenic | 45.0% | |
TCTCATGTTTGTTCAGGTCC+AGG | + | chr3_1:50131151-50131170 | Msa0360660:intron | 45.0% | |
! | CTTGGAATGAGATGGCCTTT+TGG | - | chr3_1:50131251-50131270 | None:intergenic | 45.0% |
CCACAGTACTTGGAATGAGA+TGG | - | chr3_1:50131259-50131278 | None:intergenic | 45.0% | |
! | CCATCTCATTCCAAGTACTG+TGG | + | chr3_1:50131256-50131275 | Msa0360660:CDS | 45.0% |
!! | GACAAATCAGTTGGCTTGGA+TGG | - | chr3_1:50131287-50131306 | None:intergenic | 45.0% |
ATGGGACAAATCAGTTGGCT+TGG | - | chr3_1:50131291-50131310 | None:intergenic | 45.0% | |
!! | GCCAACTGATTTGTCCCATT+TGG | + | chr3_1:50131292-50131311 | Msa0360660:CDS | 45.0% |
CTAAACTGAGCATACCGTGA+AGG | - | chr3_1:50131375-50131394 | None:intergenic | 45.0% | |
AGCTCAAAAGGGAAAGCTCT+TGG | - | chr3_1:50131665-50131684 | None:intergenic | 45.0% | |
GGTATGGTAAGATGCGTACA+AGG | + | chr3_1:50131750-50131769 | Msa0360660:intron | 45.0% | |
GACGGAGTATGCTTGTAAAG+AGG | + | chr3_1:50131863-50131882 | Msa0360660:intron | 45.0% | |
GTATCCGACACCATACTCAT+AGG | - | chr3_1:50132329-50132348 | None:intergenic | 45.0% | |
AGGACCGATCTGAAAAGAAG+TGG | - | chr3_1:50132786-50132805 | None:intergenic | 45.0% | |
TTTCAGATCGGTCCTATGCA+TGG | + | chr3_1:50132791-50132810 | Msa0360660:intron | 45.0% | |
CTACCTTGAGATCCATGCAT+AGG | - | chr3_1:50132806-50132825 | None:intergenic | 45.0% | |
GCATGGATCTCAAGGTAGTA+AGG | + | chr3_1:50132808-50132827 | Msa0360660:CDS | 45.0% | |
TGTGTGGCTTCAGTTGATCA+AGG | + | chr3_1:50132972-50132991 | Msa0360660:intron | 45.0% | |
TCAGTTGATCAAGGATCGCA+CGG | + | chr3_1:50132981-50133000 | Msa0360660:intron | 45.0% | |
AGAACTCCAGTTAGCTCAAC+AGG | + | chr3_1:50133564-50133583 | Msa0360660:CDS | 45.0% | |
CTCATAGACATAGGACTCCA+AGG | - | chr3_1:50133626-50133645 | None:intergenic | 45.0% | |
AGTCCTATGTCTATGAGACG+AGG | + | chr3_1:50133629-50133648 | Msa0360660:CDS | 45.0% | |
ACTCCTCGTCTCATAGACAT+AGG | - | chr3_1:50133635-50133654 | None:intergenic | 45.0% | |
TGTCTATGAGACGAGGAGTA+AGG | + | chr3_1:50133636-50133655 | Msa0360660:CDS | 45.0% | |
GTTTATGCAGTCAGACACTG+AGG | + | chr3_1:50133747-50133766 | Msa0360660:intron | 45.0% | |
! | GATGGTAGTCAAAGCACTAG+AGG | - | chr3_1:50134140-50134159 | None:intergenic | 45.0% |
GTGCTTTGACTACCATCCAT+AGG | + | chr3_1:50134143-50134162 | Msa0360660:intron | 45.0% | |
ACCATCCATAGGATCTTCTC+CGG | + | chr3_1:50134154-50134173 | Msa0360660:intron | 45.0% | |
AAACACCGGAGAAGATCCTA+TGG | - | chr3_1:50134162-50134181 | None:intergenic | 45.0% | |
GCACATGGGGATTAAAACAC+CGG | - | chr3_1:50134176-50134195 | None:intergenic | 45.0% | |
!!! | CAACACAAGGTTTTAGAGGG+AGG | - | chr3_1:50134245-50134264 | None:intergenic | 45.0% |
!! | CTCCCTCTAAAACCTTGTGT+TGG | + | chr3_1:50134243-50134262 | Msa0360660:intron | 45.0% |
ACAACGGATCTTCCAACACA+AGG | - | chr3_1:50134258-50134277 | None:intergenic | 45.0% | |
!! | GATCAAGTGCTGACACTTGA+AGG | - | chr3_1:50134288-50134307 | None:intergenic | 45.0% |
CGAAGAGAAGAATCCACAGT+AGG | - | chr3_1:50134319-50134338 | None:intergenic | 45.0% | |
GGATATCATTAGGGGTTAGG+AGG | - | chr3_1:50134346-50134365 | None:intergenic | 45.0% | |
TTACTAAAGGGTCGTGAGTC+GGG | - | chr3_1:50134521-50134540 | None:intergenic | 45.0% | |
CTTTGCTAGTGACCAAGAGA+GGG | + | chr3_1:50134721-50134740 | Msa0360660:CDS | 45.0% | |
TAGGAGTTTGCAAGAGACTG+AGG | + | chr3_1:50134754-50134773 | Msa0360660:CDS | 45.0% | |
GTTTGCAAGAGACTGAGGAT+TGG | + | chr3_1:50134759-50134778 | Msa0360660:CDS | 45.0% | |
!! | GACTGAGGATTGGCTTTATG+AGG | + | chr3_1:50134769-50134788 | Msa0360660:CDS | 45.0% |
!! | GAGGATTGGCTTTATGAGGA+CGG | + | chr3_1:50134773-50134792 | Msa0360660:CDS | 45.0% |
TCCACCCCAGAAAAAAGAAC+AGG | + | chr3_1:50135030-50135049 | Msa0360660:CDS | 45.0% | |
!!! | ACCTGTTCTTTTTTCTGGGG+TGG | - | chr3_1:50135034-50135053 | None:intergenic | 45.0% |
!! | AGAGCATTGGCTAACAGAGA+AGG | + | chr3_1:50135159-50135178 | Msa0360660:CDS | 45.0% |
TCTGACTACTTCTCATTGCG+AGG | + | chr3_1:50135469-50135488 | Msa0360660:intron | 45.0% | |
CTGGTTGTCATCCAGTTATG+AGG | - | chr3_1:50135505-50135524 | None:intergenic | 45.0% | |
!! | CATTTTGACAGTAGGTCCTC+TGG | - | chr3_1:50135533-50135552 | None:intergenic | 45.0% |
AAATGCTAGATGTGCCCACA+TGG | + | chr3_1:50135548-50135567 | Msa0360660:intron | 45.0% | |
AATGCTAGATGTGCCCACAT+GGG | + | chr3_1:50135549-50135568 | Msa0360660:intron | 45.0% | |
ATTCGTGTAATGGCCCATGT+GGG | - | chr3_1:50135565-50135584 | None:intergenic | 45.0% | |
AATTCGTGTAATGGCCCATG+TGG | - | chr3_1:50135566-50135585 | None:intergenic | 45.0% | |
GATGTCATGTGAGTTTCCCA+TGG | - | chr3_1:50135598-50135617 | None:intergenic | 45.0% | |
!!! | TCTCTGGTTGGCCCTTTTTT+TGG | + | chr3_1:50135664-50135683 | Msa0360660:intron | 45.0% |
TGCTAGAATGGCACCTAGTT+TGG | - | chr3_1:50135906-50135925 | None:intergenic | 45.0% | |
! | AAAGGGCTGTGTTGCTAGAA+TGG | - | chr3_1:50135918-50135937 | None:intergenic | 45.0% |
GGGTGCCCTTCAGTAATAAT+AGG | + | chr3_1:50135978-50135997 | Msa0360660:intron | 45.0% | |
GAAGGAGTTACTCAAATGGG+TGG | + | chr3_1:50136208-50136227 | Msa0360660:intron | 45.0% | |
CTCAACTGCTGATGAGCATA+TGG | + | chr3_1:50136234-50136253 | Msa0360660:intron | 45.0% | |
CATATGGTTACCTTGCGATC+TGG | + | chr3_1:50136250-50136269 | Msa0360660:intron | 45.0% | |
!! | GCCCAAACCTTTTTGGGAAT+TGG | + | chr3_1:50136305-50136324 | Msa0360660:intron | 45.0% |
AACTCAGAGCGACCTCTTAA+GGG | + | chr3_1:50136473-50136492 | Msa0360660:intron | 45.0% | |
!!! | GTTTTGAAGTGCATAGGGGA+AGG | - | chr3_1:50136577-50136596 | None:intergenic | 45.0% |
! | GAGTACGACTTTTTATGGCC+AGG | + | chr3_1:50136603-50136622 | Msa0360660:intron | 45.0% |
AGAGTTTATGGAAGTGGTCC+TGG | - | chr3_1:50136624-50136643 | None:intergenic | 45.0% | |
GAGAGGAGAGTTTATGGAAG+TGG | - | chr3_1:50136630-50136649 | None:intergenic | 45.0% | |
!! | GTTTGTGAGGGAGTGTTGAT+AGG | + | chr3_1:50136923-50136942 | Msa0360660:intron | 45.0% |
!!! | GTCTGTTGACGGATTTTCAG+AGG | + | chr3_1:50137340-50137359 | Msa0360660:intron | 45.0% |
GCGCCTCATCAATGTATTCA+CGG | - | chr3_1:50137469-50137488 | None:intergenic | 45.0% | |
GCGCCTCATCAATGTATTCA+CGG | - | chr3_1:50137469-50137488 | None:intergenic | 45.0% | |
GACAACCATTTGTTCCTCCA+AGG | + | chr3_1:50137775-50137794 | Msa0360660:three_prime_UTR | 45.0% | |
!! | ACAAAAAAAAAAAAAAAAAA+AGG | - | chr3_1:50132373-50132392 | None:intergenic | 5.0% |
CGCAATCGTCACCATTCACA+AGG | + | chr3_1:50128778-50128797 | Msa0360660:five_prime_UTR | 50.0% | |
!! | ATTGCTGTGGCAAAGCATCG+CGG | + | chr3_1:50129578-50129597 | Msa0360660:CDS | 50.0% |
! | GCGAGAAGCAGCGGTTTTTA+GGG | + | chr3_1:50129660-50129679 | Msa0360660:CDS | 50.0% |
GGCCCTTGAGAAGTTTCAAG+AGG | - | chr3_1:50129800-50129819 | None:intergenic | 50.0% | |
!! | ACTTCACCGACTTGCAGAGA+CGG | + | chr3_1:50129975-50129994 | Msa0360660:CDS | 50.0% |
ATATGCCCGTCTCTGCAAGT+CGG | - | chr3_1:50129984-50130003 | None:intergenic | 50.0% | |
CTTGACGCGGCAATAATTGC+TGG | + | chr3_1:50130004-50130023 | Msa0360660:CDS | 50.0% | |
CATTGGTCAATGCGACACTC+AGG | + | chr3_1:50130135-50130154 | Msa0360660:CDS | 50.0% | |
! | GCTTTTGACAGGAGCTTAGG+GGG | + | chr3_1:50130205-50130224 | Msa0360660:CDS | 50.0% |
! | CTTTTGACAGGAGCTTAGGG+GGG | + | chr3_1:50130206-50130225 | Msa0360660:CDS | 50.0% |
TCGATATTTAGCGGTGCCTC+TGG | - | chr3_1:50130373-50130392 | None:intergenic | 50.0% | |
! | TCTGTGGAGCTAGTTGGTTC+AGG | + | chr3_1:50130535-50130554 | Msa0360660:CDS | 50.0% |
GTATTCTCGCACACGGTATG+TGG | - | chr3_1:50130683-50130702 | None:intergenic | 50.0% | |
ATACCGTGTGCGAGAATACG+AGG | + | chr3_1:50130684-50130703 | Msa0360660:CDS | 50.0% | |
AGTACCACACCACTACACCA+TGG | - | chr3_1:50130800-50130819 | None:intergenic | 50.0% | |
GATGGGAAGACCACAGTACT+TGG | - | chr3_1:50131269-50131288 | None:intergenic | 50.0% | |
TTGCGCATGCTCTTCTGTCT+TGG | + | chr3_1:50131487-50131506 | Msa0360660:intron | 50.0% | |
! | TAGGGTGAGGTGTCTTGCAA+TGG | - | chr3_1:50132515-50132534 | None:intergenic | 50.0% |
GGTCCTATGCATGGATCTCA+AGG | + | chr3_1:50132800-50132819 | Msa0360660:CDS | 50.0% | |
! | CTATCTGAGGTCTCGGACTT+AGG | - | chr3_1:50133045-50133064 | None:intergenic | 50.0% |
AGCGCCATTGGCAACAGAAT+TGG | - | chr3_1:50133070-50133089 | None:intergenic | 50.0% | |
GGTACTATCTTCAGCGCCAT+TGG | - | chr3_1:50133082-50133101 | None:intergenic | 50.0% | |
CTCTGTCCTGTTGAGCTAAC+TGG | - | chr3_1:50133573-50133592 | None:intergenic | 50.0% | |
TGAGACGAGGAGTAAGGTAC+TGG | + | chr3_1:50133642-50133661 | Msa0360660:intron | 50.0% | |
! | AGTCAAAGCACTAGAGGCAG+AGG | - | chr3_1:50134134-50134153 | None:intergenic | 50.0% |
ACCGGAGAAGATCCTATGGA+TGG | - | chr3_1:50134158-50134177 | None:intergenic | 50.0% | |
TGTGGGGTAAGATGGCACAT+GGG | - | chr3_1:50134190-50134209 | None:intergenic | 50.0% | |
ATGTGGGGTAAGATGGCACA+TGG | - | chr3_1:50134191-50134210 | None:intergenic | 50.0% | |
TGATCCACAGAACCCTACTG+TGG | + | chr3_1:50134303-50134322 | Msa0360660:intron | 50.0% | |
GAATCCACAGTAGGGTTCTG+TGG | - | chr3_1:50134310-50134329 | None:intergenic | 50.0% | |
GCTTTGCTAGTGACCAAGAG+AGG | + | chr3_1:50134720-50134739 | Msa0360660:CDS | 50.0% | |
GCGCAATAGAGGAGCTAAAC+AGG | + | chr3_1:50135245-50135264 | Msa0360660:CDS | 50.0% | |
ATGACAACCAGCCTTTCCAG+AGG | + | chr3_1:50135514-50135533 | Msa0360660:intron | 50.0% | |
! | TGACAGTAGGTCCTCTGGAA+AGG | - | chr3_1:50135528-50135547 | None:intergenic | 50.0% |
TTGAGTCTCCTCTCACTCTC+TGG | + | chr3_1:50135648-50135667 | Msa0360660:intron | 50.0% | |
GTCCCTCATTGGATGTGAGA+TGG | + | chr3_1:50136073-50136092 | Msa0360660:intron | 50.0% | |
GGCCATCTCACATCCAATGA+GGG | - | chr3_1:50136078-50136097 | None:intergenic | 50.0% | |
AGGCCATCTCACATCCAATG+AGG | - | chr3_1:50136079-50136098 | None:intergenic | 50.0% | |
ACAAAACTGGCTGTGAGGTG+AGG | - | chr3_1:50136129-50136148 | None:intergenic | 50.0% | |
TGTGGTTGGGCACACAAAAC+TGG | - | chr3_1:50136142-50136161 | None:intergenic | 50.0% | |
AGCACGTTAACCAGATCGCA+AGG | - | chr3_1:50136263-50136282 | None:intergenic | 50.0% | |
AAAGGTTGCAGTAAGCCAGC+TGG | + | chr3_1:50136329-50136348 | Msa0360660:intron | 50.0% | |
CAGTAAGCCAGCTGGAGTTA+AGG | + | chr3_1:50136337-50136356 | Msa0360660:intron | 50.0% | |
! | GAGGTCGCTCTGAGTTCTTT+AGG | - | chr3_1:50136469-50136488 | None:intergenic | 50.0% |
GAACTCAGAGCGACCTCTTA+AGG | + | chr3_1:50136472-50136491 | Msa0360660:intron | 50.0% | |
TCTCCTCTCATAGACTGACC+TGG | + | chr3_1:50136641-50136660 | Msa0360660:intron | 50.0% | |
GAACCAGGTCAGTCTATGAG+AGG | - | chr3_1:50136647-50136666 | None:intergenic | 50.0% | |
!! | TTCGTCTTCTGAAGGTGTCC+TGG | - | chr3_1:50137386-50137405 | None:intergenic | 50.0% |
!! | TTCGTCTTCTGAAGGTGTCC+TGG | - | chr3_1:50137386-50137405 | None:intergenic | 50.0% |
! | AATTAGCCTCATGAGGGGGA+GGG | - | chr3_1:50137737-50137756 | None:intergenic | 50.0% |
! | AAATTAGCCTCATGAGGGGG+AGG | - | chr3_1:50137738-50137757 | None:intergenic | 50.0% |
!! | TTGCTGTGGCAAAGCATCGC+GGG | + | chr3_1:50129579-50129598 | Msa0360660:CDS | 55.0% |
TCTGCTTTGGCGAGAAGCAG+CGG | + | chr3_1:50129651-50129670 | Msa0360660:CDS | 55.0% | |
! | GGCGAGAAGCAGCGGTTTTT+AGG | + | chr3_1:50129659-50129678 | Msa0360660:CDS | 55.0% |
!!! | CAGCGGTTTTTAGGGTCTGC+TGG | + | chr3_1:50129668-50129687 | Msa0360660:CDS | 55.0% |
GAAACTTCTCAAGGGCCGGA+TGG | + | chr3_1:50129803-50129822 | Msa0360660:CDS | 55.0% | |
!! | CTTCACCGACTTGCAGAGAC+GGG | + | chr3_1:50129976-50129995 | Msa0360660:CDS | 55.0% |
GAGACGGGCATATCTTGACG+CGG | + | chr3_1:50129991-50130010 | Msa0360660:CDS | 55.0% | |
ACGCAGCCTAATGCAAGCCT+TGG | - | chr3_1:50130311-50130330 | None:intergenic | 55.0% | |
GCAAGTGAGTGTGTAGCTCG+TGG | + | chr3_1:50130628-50130647 | Msa0360660:CDS | 55.0% | |
GTGAAGGGATCTCACCATGG+TGG | + | chr3_1:50130848-50130867 | Msa0360660:intron | 55.0% | |
!! | TCAGTGTTGTCGATGGCGGA+AGG | - | chr3_1:50130915-50130934 | None:intergenic | 55.0% |
!! | GATGTTTCAGGAAGTGCCCG+AGG | + | chr3_1:50131983-50132002 | Msa0360660:intron | 55.0% |
AGCTCAACAGGACAGAGCTG+TGG | + | chr3_1:50133576-50133595 | Msa0360660:CDS | 55.0% | |
GTGGGGTAAGATGGCACATG+GGG | - | chr3_1:50134189-50134208 | None:intergenic | 55.0% | |
!! | GGAGGTTTTTGGGAGCCACA+AGG | - | chr3_1:50134227-50134246 | None:intergenic | 55.0% |
! | AGTAGGTCCTCTGGAAAGGC+TGG | - | chr3_1:50135524-50135543 | None:intergenic | 55.0% |
GTCTCCTCTCACTCTCTGGT+TGG | + | chr3_1:50135652-50135671 | Msa0360660:intron | 55.0% | |
GGCACACAAAACTGGCTGTG+AGG | - | chr3_1:50136134-50136153 | None:intergenic | 55.0% | |
GTCAGCACCTTAACTCCAGC+TGG | - | chr3_1:50136347-50136366 | None:intergenic | 55.0% | |
! | ATTAGCCTCATGAGGGGGAG+GGG | - | chr3_1:50137736-50137755 | None:intergenic | 55.0% |
ACCCCTGCTGTCGTCTGCTT+TGG | + | chr3_1:50129638-50129657 | Msa0360660:CDS | 60.0% | |
GCCAAAGCAGACGACAGCAG+GGG | - | chr3_1:50129642-50129661 | None:intergenic | 60.0% | |
CGCCAAAGCAGACGACAGCA+GGG | - | chr3_1:50129643-50129662 | None:intergenic | 60.0% | |
TCGCCAAAGCAGACGACAGC+AGG | - | chr3_1:50129644-50129663 | None:intergenic | 60.0% | |
ACTTCTCAAGGGCCGGATGG+TGG | + | chr3_1:50129806-50129825 | Msa0360660:CDS | 60.0% | |
TTGACAGGAGCTTAGGGGGG+AGG | + | chr3_1:50130209-50130228 | Msa0360660:CDS | 60.0% | |
TGACAGGAGCTTAGGGGGGA+GGG | + | chr3_1:50130210-50130229 | Msa0360660:CDS | 60.0% | |
ATGGGGCTGCCATGGTGTAG+TGG | + | chr3_1:50130788-50130807 | Msa0360660:intron | 60.0% | |
GCTGCCATGGTGTAGTGGTG+TGG | + | chr3_1:50130793-50130812 | Msa0360660:intron | 60.0% | |
! | TCTCACCATGGTGGCGCCAT+AGG | + | chr3_1:50130857-50130876 | Msa0360660:intron | 60.0% |
GGTCGTGAGTCGGGACAGAA+AGG | - | chr3_1:50134512-50134531 | None:intergenic | 60.0% | |
AGGGCCAACCAGAGAGTGAG+AGG | - | chr3_1:50135659-50135678 | None:intergenic | 60.0% | |
TTAGCCTCATGAGGGGGAGG+GGG | - | chr3_1:50137735-50137754 | None:intergenic | 60.0% | |
AGGGGGGAGGGACTTTGACG+AGG | + | chr3_1:50130222-50130241 | Msa0360660:CDS | 65.0% | |
TGGAAGCGATGGGGCTGCCA+TGG | + | chr3_1:50130780-50130799 | Msa0360660:intron | 65.0% | |
TGCAGCCTATGGCGCCACCA+TGG | - | chr3_1:50130865-50130884 | None:intergenic | 65.0% | |
GGTGGCGCCATAGGCTGCAA+TGG | + | chr3_1:50130866-50130885 | Msa0360660:intron | 65.0% | |
TAGCCTCATGAGGGGGAGGG+GGG | - | chr3_1:50137734-50137753 | None:intergenic | 65.0% | |
AGCCTCATGAGGGGGAGGGG+GGG | - | chr3_1:50137733-50137752 | None:intergenic | 70.0% | |
TCATGAGGGGGAGGGGGGGG+GGG | - | chr3_1:50137729-50137748 | None:intergenic | 75.0% | |
CTCATGAGGGGGAGGGGGGG+GGG | - | chr3_1:50137730-50137749 | None:intergenic | 75.0% | |
CCTCATGAGGGGGAGGGGGG+GGG | - | chr3_1:50137731-50137750 | None:intergenic | 75.0% | |
GCCTCATGAGGGGGAGGGGG+GGG | - | chr3_1:50137732-50137751 | None:intergenic | 75.0% | |
! | ATGAGGGGGAGGGGGGGGGG+GGG | - | chr3_1:50137727-50137746 | None:intergenic | 80.0% |
! | CATGAGGGGGAGGGGGGGGG+GGG | - | chr3_1:50137728-50137747 | None:intergenic | 80.0% |
! | CCCCCCCCCTCCCCCTCATG+AGG | + | chr3_1:50137728-50137747 | Msa0360660:three_prime_UTR | 80.0% |
! | TGAGGGGGAGGGGGGGGGGG+GGG | - | chr3_1:50137726-50137745 | None:intergenic | 85.0% |
! | AGGGGGAGGGGGGGGGGGGG+GGG | - | chr3_1:50137724-50137743 | None:intergenic | 90.0% |
! | GAGGGGGAGGGGGGGGGGGG+GGG | - | chr3_1:50137725-50137744 | None:intergenic | 90.0% |
! | AGGGGGGGGGGGGGGGGGGG+GGG | - | chr3_1:50137718-50137737 | None:intergenic | 95.0% |
! | GAGGGGGGGGGGGGGGGGGG+GGG | - | chr3_1:50137719-50137738 | None:intergenic | 95.0% |
! | GGAGGGGGGGGGGGGGGGGG+GGG | - | chr3_1:50137720-50137739 | None:intergenic | 95.0% |
! | GGGAGGGGGGGGGGGGGGGG+GGG | - | chr3_1:50137721-50137740 | None:intergenic | 95.0% |
! | GGGGAGGGGGGGGGGGGGGG+GGG | - | chr3_1:50137722-50137741 | None:intergenic | 95.0% |
! | GGGGGAGGGGGGGGGGGGGG+GGG | - | chr3_1:50137723-50137742 | None:intergenic | 95.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_1 | gene | 50128721 | 50137965 | 50128721 | ID=Msa0360660;Name=Msa0360660 |
chr3_1 | mRNA | 50128721 | 50137965 | 50128721 | ID=Msa0360660-mRNA-1;Parent=Msa0360660;Name=Msa0360660-mRNA-1;_AED=0.10;_eAED=0.10;_QI=201|1|1|1|0.72|0.58|12|357|780 |
chr3_1 | exon | 50128721 | 50128799 | 50128721 | ID=Msa0360660-mRNA-1:exon:8843;Parent=Msa0360660-mRNA-1 |
chr3_1 | exon | 50129387 | 50129406 | 50129387 | ID=Msa0360660-mRNA-1:exon:8844;Parent=Msa0360660-mRNA-1 |
chr3_1 | exon | 50129434 | 50130705 | 50129434 | ID=Msa0360660-mRNA-1:exon:8845;Parent=Msa0360660-mRNA-1 |
chr3_1 | exon | 50131167 | 50131379 | 50131167 | ID=Msa0360660-mRNA-1:exon:8846;Parent=Msa0360660-mRNA-1 |
chr3_1 | exon | 50132797 | 50132892 | 50132797 | ID=Msa0360660-mRNA-1:exon:8847;Parent=Msa0360660-mRNA-1 |
chr3_1 | exon | 50132985 | 50133128 | 50132985 | ID=Msa0360660-mRNA-1:exon:8848;Parent=Msa0360660-mRNA-1 |
chr3_1 | exon | 50133457 | 50133657 | 50133457 | ID=Msa0360660-mRNA-1:exon:8849;Parent=Msa0360660-mRNA-1 |
chr3_1 | exon | 50134701 | 50134847 | 50134701 | ID=Msa0360660-mRNA-1:exon:8850;Parent=Msa0360660-mRNA-1 |
chr3_1 | exon | 50134923 | 50135051 | 50134923 | ID=Msa0360660-mRNA-1:exon:8851;Parent=Msa0360660-mRNA-1 |
chr3_1 | exon | 50135136 | 50135266 | 50135136 | ID=Msa0360660-mRNA-1:exon:8852;Parent=Msa0360660-mRNA-1 |
chr3_1 | exon | 50137360 | 50137521 | 50137360 | ID=Msa0360660-mRNA-1:exon:8853;Parent=Msa0360660-mRNA-1 |
chr3_1 | exon | 50137659 | 50137965 | 50137659 | ID=Msa0360660-mRNA-1:exon:8854;Parent=Msa0360660-mRNA-1 |
chr3_1 | five_prime_UTR | 50128721 | 50128799 | 50128721 | ID=Msa0360660-mRNA-1:five_prime_utr;Parent=Msa0360660-mRNA-1 |
chr3_1 | five_prime_UTR | 50129387 | 50129406 | 50129387 | ID=Msa0360660-mRNA-1:five_prime_utr;Parent=Msa0360660-mRNA-1 |
chr3_1 | five_prime_UTR | 50129434 | 50129535 | 50129434 | ID=Msa0360660-mRNA-1:five_prime_utr;Parent=Msa0360660-mRNA-1 |
chr3_1 | CDS | 50129536 | 50130705 | 50129536 | ID=Msa0360660-mRNA-1:cds;Parent=Msa0360660-mRNA-1 |
chr3_1 | CDS | 50131167 | 50131379 | 50131167 | ID=Msa0360660-mRNA-1:cds;Parent=Msa0360660-mRNA-1 |
chr3_1 | CDS | 50132797 | 50132892 | 50132797 | ID=Msa0360660-mRNA-1:cds;Parent=Msa0360660-mRNA-1 |
chr3_1 | CDS | 50132985 | 50133128 | 50132985 | ID=Msa0360660-mRNA-1:cds;Parent=Msa0360660-mRNA-1 |
chr3_1 | CDS | 50133457 | 50133657 | 50133457 | ID=Msa0360660-mRNA-1:cds;Parent=Msa0360660-mRNA-1 |
chr3_1 | CDS | 50134701 | 50134847 | 50134701 | ID=Msa0360660-mRNA-1:cds;Parent=Msa0360660-mRNA-1 |
chr3_1 | CDS | 50134923 | 50135051 | 50134923 | ID=Msa0360660-mRNA-1:cds;Parent=Msa0360660-mRNA-1 |
chr3_1 | CDS | 50135136 | 50135266 | 50135136 | ID=Msa0360660-mRNA-1:cds;Parent=Msa0360660-mRNA-1 |
chr3_1 | CDS | 50137360 | 50137471 | 50137360 | ID=Msa0360660-mRNA-1:cds;Parent=Msa0360660-mRNA-1 |
chr3_1 | three_prime_UTR | 50137472 | 50137521 | 50137472 | ID=Msa0360660-mRNA-1:three_prime_utr;Parent=Msa0360660-mRNA-1 |
chr3_1 | three_prime_UTR | 50137659 | 50137965 | 50137659 | ID=Msa0360660-mRNA-1:three_prime_utr;Parent=Msa0360660-mRNA-1 |
Gene Sequence |
Protein sequence |