AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0287410


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0287410 MtrunA17_Chr2g0304541 96.007 551 15 1 1 551 1 544 0.0 1075
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0287410 AT2G12550.1 56.228 562 226 8 1 546 1 558 0.0 633

Find 145 sgRNAs with CRISPR-Local

Find 530 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCAAATCATCTTCTTATT+TGG 0.145142 2_3:+30244989 None:intergenic
TGTAAATCAGAATTGGTTTC+TGG 0.155036 2_3:+30245623 None:intergenic
CAGATCCACGGCCTTCTTTA+AGG 0.187611 2_3:+30245933 None:intergenic
CTACTCACCTCAATGACTTT+TGG 0.271684 2_3:+30248664 None:intergenic
AGAAACCAATTCTGATTTAC+AGG 0.272571 2_3:-30245621 Msa0287410:intron
TACTGTCACTTCTCCTCAAC+AGG 0.299237 2_3:-30252115 Msa0287410:CDS
GGGGTGGTGGCATTTCATTC+TGG 0.301341 2_3:-30246775 Msa0287410:CDS
TCATGCTACGGGACATTAGA+TGG 0.315239 2_3:-30247081 Msa0287410:CDS
CATCTTTGTAATTTCCCTTT+CGG 0.340092 2_3:+30249425 None:intergenic
GAATTCTACCAGCACAAATA+AGG 0.341318 2_3:+30252205 None:intergenic
ACCCTAACCCTAACTCAATT+AGG 0.351068 2_3:-30252165 Msa0287410:CDS
CTGAACGAATTGGTCACTAT+TGG 0.357481 2_3:-30245904 Msa0287410:CDS
GATCTTCAACCCCATTCATT+TGG 0.359756 2_3:+30245168 None:intergenic
GTGTTTCTGCTCTTTGATGC+AGG 0.368545 2_3:-30244919 Msa0287410:three_prime_UTR
TGTGAAGAATTTCTTACTCT+TGG 0.369609 2_3:-30244660 Msa0287410:three_prime_UTR
TACCTAATTGAGTTAGGGTT+AGG 0.371212 2_3:+30252163 None:intergenic
AAGAAGTCGATTTAGAGAAT+TGG 0.371754 2_3:-30252293 Msa0287410:CDS
CTTAAAGAAGGCCGTGGATC+TGG 0.374229 2_3:-30245932 Msa0287410:CDS
AGATCCACGGCCTTCTTTAA+GGG 0.381674 2_3:+30245934 None:intergenic
TGTTACCTGTAAATCAGAAT+TGG 0.383655 2_3:+30245616 None:intergenic
ACCATGTCAATTTGCAGTAT+TGG 0.385264 2_3:+30247115 None:intergenic
TGCAAAAGCGAAGTTTGTTC+AGG 0.395049 2_3:-30246719 Msa0287410:intron
CATAACTGAGTACCTGTCTA+TGG 0.395210 2_3:-30245033 Msa0287410:CDS
CTCATAGGCTTGCTCGTATT+AGG 0.406605 2_3:-30252062 Msa0287410:intron
AGGGATCTCATGTAAATATC+TGG 0.413535 2_3:-30244899 Msa0287410:three_prime_UTR
CTTGCCTTGATTTCTCCAAC+TGG 0.414108 2_3:+30246752 None:intergenic
GAATGAACAATCAAGATGTT+GGG 0.423602 2_3:-30246133 Msa0287410:CDS
TTCATTAACCTTATTTGTGC+TGG 0.424720 2_3:-30252213 Msa0287410:CDS
CTGCAACTGCATTGGCTGAA+AGG 0.425202 2_3:-30249719 Msa0287410:CDS
TACATTTGTGCTCATTCCCT+AGG 0.425792 2_3:-30244871 Msa0287410:three_prime_UTR
TTTAATACCTAATTGAGTTA+GGG 0.427412 2_3:+30252158 None:intergenic
TTCCTGCCCTAGCCATTTCA+AGG 0.427968 2_3:+30247038 None:intergenic
CTGTCTATGGTTGAGTCTGC+AGG 0.429526 2_3:-30245020 Msa0287410:CDS
TGCTGGAAAGCGCCTTGAAA+TGG 0.430491 2_3:-30247050 Msa0287410:CDS
GACATTCTAGACCAAATGAA+TGG 0.434790 2_3:-30245179 Msa0287410:CDS
GACATTGAAGTTAATATTGA+AGG 0.441170 2_3:-30245062 Msa0287410:CDS
CCAGGGAGCAAAAGCGGTAT+GGG 0.441248 2_3:-30245963 Msa0287410:intron
CGAATGAACAATCAAGATGT+TGG 0.443559 2_3:-30246134 Msa0287410:CDS
GCAGCAGTTGAATTCATTTG+AGG 0.444304 2_3:+30245254 None:intergenic
TGAACGAATTGGTCACTATT+GGG 0.444732 2_3:-30245903 Msa0287410:intron
TTCTTCACGTAACGAAGAAA+TGG 0.446494 2_3:+30252269 None:intergenic
AGTGACAGTAGCGAGAATCT+TGG 0.449149 2_3:+30252128 None:intergenic
ATTTGGCAGGGCAGTAATGA+TGG 0.451862 2_3:-30249482 Msa0287410:intron
ACCTAATTGAGTTAGGGTTA+GGG 0.453417 2_3:+30252164 None:intergenic
AGAAGAAAGGGATGTGGAGA+TGG 0.456681 2_3:-30245135 Msa0287410:CDS
GGTTGCATATTCTCAGCCTC+AGG 0.456720 2_3:+30245275 None:intergenic
ATCACAATAAAACAGAAGAA+AGG 0.465013 2_3:-30245148 Msa0287410:CDS
CATAGACAGGTACTCAGTTA+TGG 0.465982 2_3:+30245034 None:intergenic
TATCAGTTTATGTAAATAGC+AGG 0.466133 2_3:-30244960 Msa0287410:three_prime_UTR
GGCATTTCATTCTGGCCAGT+TGG 0.467585 2_3:-30246767 Msa0287410:CDS
TTGAGACTAGAGCTGCTTGA+AGG 0.470120 2_3:-30246796 Msa0287410:CDS
ACATTCTAGACCAAATGAAT+GGG 0.470306 2_3:-30245178 Msa0287410:CDS
ACAAGTGATAAGGCCTCATC+TGG 0.470489 2_3:+30246200 None:intergenic
TTGAGGAACAAAGCTCTCAT+AGG 0.473510 2_3:-30252077 Msa0287410:CDS
TCCAGGGAGCAAAAGCGGTA+TGG 0.475210 2_3:-30245964 Msa0287410:intron
AAGATAGCAGGAACATGGTC+AGG 0.478722 2_3:-30252324 Msa0287410:CDS
TGCCATTGATTTCCTTGTTG+AGG 0.482254 2_3:-30246108 Msa0287410:CDS
GAAGTGAGGATTATCGCAAT+TGG 0.482473 2_3:+30252233 None:intergenic
GGACTGATGCTTCATGCAAA+GGG 0.483061 2_3:-30249460 Msa0287410:CDS
TGATTTCCTTGTTGAGGAGA+AGG 0.485527 2_3:-30246102 Msa0287410:CDS
TCACAATAAAACAGAAGAAA+GGG 0.485998 2_3:-30245147 Msa0287410:CDS
TCTGGAGAGACTGAACGAAT+TGG 0.486099 2_3:-30245914 Msa0287410:CDS
CAGGGCAGCTGCAACTGCAT+TGG 0.489381 2_3:-30249727 Msa0287410:CDS
CGCCTTGAAATGGCTAGGGC+AGG 0.494912 2_3:-30247040 Msa0287410:CDS
TGTTTCTGCTCTTTGATGCA+GGG 0.497759 2_3:-30244918 Msa0287410:three_prime_UTR
CTTATCACTTGTTATGAGCA+TGG 0.500815 2_3:-30246189 Msa0287410:CDS
CATGCTCATAACAAGTGATA+AGG 0.501636 2_3:+30246190 None:intergenic
AGAAAGGGATGTGGAGATGG+AGG 0.502336 2_3:-30245132 Msa0287410:CDS
TTCAATGTCATAATCAGTAA+AGG 0.506090 2_3:+30245076 None:intergenic
ATAACTCACAGTGCAACCTC+TGG 0.506415 2_3:+30246956 None:intergenic
GCAGGAATTGAACGTGCTCA+TGG 0.514358 2_3:-30247022 Msa0287410:CDS
CTCTCTGCAGATATAGCTAA+AGG 0.515262 2_3:-30245104 Msa0287410:CDS
CTCCTCAACAAGGAAATCAA+TGG 0.515392 2_3:+30246106 None:intergenic
ATTAGATGGTTATCAGATGC+TGG 0.515816 2_3:-30247067 Msa0287410:CDS
ACATTGAAGTTAATATTGAA+GGG 0.516059 2_3:-30245061 Msa0287410:CDS
TGAGCATGGGCTACACTCAA+AGG 0.519721 2_3:-30246175 Msa0287410:CDS
ATCTCATGTAAATATCTGGA+TGG 0.519920 2_3:-30244895 Msa0287410:three_prime_UTR
CTGGCCAGTTGGAGAAATCA+AGG 0.520361 2_3:-30246756 Msa0287410:CDS
TTATCACTTGTTATGAGCAT+GGG 0.521383 2_3:-30246188 Msa0287410:CDS
GATCCACGGCCTTCTTTAAG+GGG 0.523385 2_3:+30245935 None:intergenic
GCTGAGACTGTTCTCAAAGT+AGG 0.527826 2_3:-30244710 Msa0287410:three_prime_UTR
CTAATTATTATAGAAACCCT+AGG 0.530124 2_3:+30244854 None:intergenic
ACATTTGTGCTCATTCCCTA+GGG 0.532330 2_3:-30244870 Msa0287410:three_prime_UTR
CTTACATCGCAGGTTTGAGA+AGG 0.534464 2_3:-30245714 Msa0287410:intron
TTGTGCTGGTAGAATTCTCA+AGG 0.536220 2_3:-30252199 Msa0287410:CDS
TGAGACTAGAGCTGCTTGAA+GGG 0.538710 2_3:-30246795 Msa0287410:CDS
AAATGATACTCAGAAGGCAT+TGG 0.543068 2_3:-30245660 Msa0287410:CDS
GAGCATGGGCTACACTCAAA+GGG 0.544631 2_3:-30246174 Msa0287410:CDS
TTAAGATCGAGTCAAGGAAA+AGG 0.546564 2_3:-30245527 Msa0287410:CDS
AGAGCTGCTTGAAGGGGTGG+TGG 0.548955 2_3:-30246788 Msa0287410:CDS
ATGGCGAAATTGAAGATAGC+AGG 0.549751 2_3:-30252336 Msa0287410:CDS
GGGTCAGTCTCTTGTTGTTG+AGG 0.549824 2_3:-30252094 Msa0287410:CDS
AGTGGACAGAAAGTACGCTT+AGG 0.551971 2_3:-30249642 Msa0287410:CDS
TACTGCAAATTGACATGGTA+TGG 0.553370 2_3:-30247111 Msa0287410:CDS
TAGCAGGATTATAAAGACAA+TGG 0.563927 2_3:-30244944 Msa0287410:three_prime_UTR
CAGGAATTGAACGTGCTCAT+GGG 0.566377 2_3:-30247021 Msa0287410:CDS
TTGTGATCCAAAAGTCATTG+AGG 0.569044 2_3:-30248671 Msa0287410:intron
TATGGTGCTACTTCATGCTA+CGG 0.569586 2_3:-30247093 Msa0287410:CDS
TGAAGTGCTTACCATGGGAG+AGG 0.572323 2_3:-30249398 Msa0287410:intron
AGAATTTCTTACTCTTGGTG+TGG 0.573371 2_3:-30244655 Msa0287410:three_prime_UTR
TTTGGCAGGGCAGTAATGAT+GGG 0.575905 2_3:-30249481 Msa0287410:intron
TTCATTCCAGGGAGCAAAAG+CGG 0.576218 2_3:-30245969 Msa0287410:intron
TAAAACAGAAGAAAGGGATG+TGG 0.577129 2_3:-30245141 Msa0287410:CDS
CTCCGCCTCAGACTCTTACA+AGG 0.581292 2_3:-30246989 Msa0287410:CDS
TCTATGTTAAAGTCTTCAAG+AGG 0.581402 2_3:+30249678 None:intergenic
CGAGTGGAGTGATCGCAACA+TGG 0.585539 2_3:-30252355 Msa0287410:exon
ATGGTGCTACTTCATGCTAC+GGG 0.586062 2_3:-30247092 Msa0287410:CDS
CTGCAGACTCAACCATAGAC+AGG 0.588061 2_3:+30245021 None:intergenic
ACTAGAGCTGCTTGAAGGGG+TGG 0.592346 2_3:-30246791 Msa0287410:CDS
GAAAGCGCCTTGAAATGGCT+AGG 0.596531 2_3:-30247045 Msa0287410:CDS
AATTGAACGTGCTCATGGGA+AGG 0.600472 2_3:-30247017 Msa0287410:CDS
GGGACTGATGCTTCATGCAA+AGG 0.602701 2_3:-30249461 Msa0287410:CDS
AAAGCGCCTTGAAATGGCTA+GGG 0.603487 2_3:-30247044 Msa0287410:CDS
AAATGAAAATGATACTCAGA+AGG 0.604629 2_3:-30245666 Msa0287410:CDS
CAAATAAGGTTAATGAAGTG+AGG 0.605620 2_3:+30252219 None:intergenic
CATTGAAGTTAATATTGAAG+GGG 0.605658 2_3:-30245060 Msa0287410:CDS
TCTCATGTAAATATCTGGAT+GGG 0.609184 2_3:-30244894 Msa0287410:three_prime_UTR
GAGACTAGAGCTGCTTGAAG+GGG 0.611311 2_3:-30246794 Msa0287410:CDS
TGCACTTGAAGTGCTTACCA+TGG 0.613852 2_3:-30249404 Msa0287410:CDS
TCTTTGCCTTCTCCTCAACA+AGG 0.617660 2_3:+30246096 None:intergenic
GAGACTGTTCTCAAAGTAGG+TGG 0.619164 2_3:-30244707 Msa0287410:three_prime_UTR
ATAGAAGTTGAAGATCAAAG+TGG 0.620042 2_3:-30249660 Msa0287410:CDS
GTTCAGTCTCTCCAGATCCA+CGG 0.623737 2_3:+30245921 None:intergenic
GCACTTGAAGTGCTTACCAT+GGG 0.624029 2_3:-30249403 Msa0287410:CDS
ACAAGAGACTGACCCTGTTG+AGG 0.629157 2_3:+30252102 None:intergenic
GACCACCTTGTAAGAGTCTG+AGG 0.631446 2_3:+30246984 None:intergenic
CATCAATCAACAGAATCGAG+TGG 0.637693 2_3:-30252371 Msa0287410:five_prime_UTR
TAAGGAACTAACCTCTCCCA+TGG 0.639510 2_3:+30249387 None:intergenic
TCCAATACTGCAAATTGACA+TGG 0.640785 2_3:-30247116 Msa0287410:CDS
AATTGAAGATAGCAGGAACA+TGG 0.644813 2_3:-30252329 Msa0287410:CDS
ATCCACGGCCTTCTTTAAGG+GGG 0.652056 2_3:+30245936 None:intergenic
AAGACTGACAGCACAACCTG+AGG 0.658542 2_3:-30245291 Msa0287410:CDS
CAGGGAGCAAAAGCGGTATG+GGG 0.658721 2_3:-30245962 Msa0287410:CDS
AATGAACAATCAAGATGTTG+GGG 0.658796 2_3:-30246132 Msa0287410:CDS
ACAAGGTGGTCGCTATCCAG+AGG 0.659802 2_3:-30246972 Msa0287410:CDS
ACAGCTGCAAGTGCCAGATG+AGG 0.661882 2_3:-30246213 Msa0287410:intron
TAATTATTATAGAAACCCTA+GGG 0.662722 2_3:+30244855 None:intergenic
CGCCTCAGACTCTTACAAGG+TGG 0.663380 2_3:-30246986 Msa0287410:CDS
TAAAGGTTAAGATCGAGTCA+AGG 0.665127 2_3:-30245533 Msa0287410:intron
TTGGCTGAAAGGCATGCAGA+TGG 0.670570 2_3:-30249708 Msa0287410:CDS
CATTCTAGACCAAATGAATG+GGG 0.681680 2_3:-30245177 Msa0287410:CDS
GACTGATGCTTCATGCAAAG+GGG 0.691968 2_3:-30249459 Msa0287410:CDS
CACCTTGTAAGAGTCTGAGG+CGG 0.705300 2_3:+30246987 None:intergenic
TAGGATCAGAGATTGATCAG+AGG 0.717978 2_3:-30249623 Msa0287410:intron
ACTGTCACTTCTCCTCAACA+GGG 0.732804 2_3:-30252114 Msa0287410:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TCAAGATAATTATTTTAATA+AGG + chr2_3:30247696-30247715 None:intergenic 10.0%
!!! TATAATTTTCTAACTTTTTT+AGG + chr2_3:30248811-30248830 None:intergenic 10.0%
!! TAAAAAAGTTAGAAAATTAT+AGG - chr2_3:30248810-30248829 Msa0287410:intron 10.0%
!! ATTAAAAGTAGATTAATTAT+CGG - chr2_3:30250194-30250213 Msa0287410:intron 10.0%
!!! TTCCTTTTTAATTATGTTTA+TGG - chr2_3:30245064-30245083 Msa0287410:CDS 15.0%
!! AAAATAATGTTAGATAGTTA+GGG - chr2_3:30245459-30245478 Msa0287410:CDS 15.0%
!!! GATTAAAGACTTTTTATTTT+AGG + chr2_3:30246169-30246188 None:intergenic 15.0%
!!! TATTTTGAAATAATTATCCT+AGG - chr2_3:30246261-30246280 Msa0287410:intron 15.0%
!!! TTTTATATGCAATTTTGTTT+CGG - chr2_3:30246650-30246669 Msa0287410:intron 15.0%
!! AATTATGTATTTATGCTTAA+AGG + chr2_3:30246901-30246920 None:intergenic 15.0%
!!! TTATCATATCCTATAATTTT+GGG - chr2_3:30247175-30247194 Msa0287410:intron 15.0%
!!! TTTAAGTTAATGCTTTTATT+AGG - chr2_3:30247847-30247866 Msa0287410:intron 15.0%
!!! TTAAGTTAATGCTTTTATTA+GGG - chr2_3:30247848-30247867 Msa0287410:intron 15.0%
!!! AATAAGAGTTTTACAAATTT+TGG - chr2_3:30247929-30247948 Msa0287410:intron 15.0%
!! TTTAATACCTAATTGAGTTA+GGG + chr2_3:30244907-30244926 None:intergenic 20.0%
!!! TTTTAATACCTAATTGAGTT+AGG + chr2_3:30244908-30244927 None:intergenic 20.0%
!! CACCATAAACATAATTAAAA+AGG + chr2_3:30245069-30245088 None:intergenic 20.0%
!!! TATTTTCTCAAATACATGTT+TGG + chr2_3:30245445-30245464 None:intergenic 20.0%
!! GAAAATAATGTTAGATAGTT+AGG - chr2_3:30245458-30245477 Msa0287410:CDS 20.0%
!!! ATTTTAATGTTAGGTAGTTT+GGG - chr2_3:30245489-30245508 Msa0287410:CDS 20.0%
!!! AATTGGTGATTTTTTCAAAT+CGG - chr2_3:30246315-30246334 Msa0287410:intron 20.0%
!!! CAAATACTAATTTTATCCTT+CGG - chr2_3:30246518-30246537 Msa0287410:intron 20.0%
!! CAATTGAATAAACAAAGAAA+TGG + chr2_3:30246576-30246595 None:intergenic 20.0%
!!! CATTTCTTTGTTTATTCAAT+TGG - chr2_3:30246574-30246593 Msa0287410:intron 20.0%
!! TTTCATGTAATTATGCTTAA+AGG + chr2_3:30246840-30246859 None:intergenic 20.0%
!!! TTTTTCTCAATAAAACAACT+AGG + chr2_3:30247033-30247052 None:intergenic 20.0%
!!! AGTTGTTTTATTGAGAAAAA+TGG - chr2_3:30247033-30247052 Msa0287410:CDS 20.0%
!! AGAAAAATGGATATTTGATT+TGG - chr2_3:30247046-30247065 Msa0287410:CDS 20.0%
!!! CTTATCATATCCTATAATTT+TGG - chr2_3:30247174-30247193 Msa0287410:intron 20.0%
!! TAATGATAAATCATGAAGAA+AGG - chr2_3:30247238-30247257 Msa0287410:intron 20.0%
!!! AATTATTTTTTATCAGTGTG+AGG - chr2_3:30247498-30247517 Msa0287410:intron 20.0%
!!! ATTATTTTTTATCAGTGTGA+GGG - chr2_3:30247499-30247518 Msa0287410:intron 20.0%
!! TTATTGTTATAAGGAAAGAT+AGG + chr2_3:30247914-30247933 None:intergenic 20.0%
!! GTAAAACTCTTATTGTTATA+AGG + chr2_3:30247923-30247942 None:intergenic 20.0%
!!! ACATGGAATTTTTCAATTAA+TGG + chr2_3:30248341-30248360 None:intergenic 20.0%
!! AACTAAAATAAATAATTGGC+AGG + chr2_3:30248468-30248487 None:intergenic 20.0%
!!! CAATTTTTATTGCAAAGAAT+TGG - chr2_3:30248541-30248560 Msa0287410:intron 20.0%
!!! TTTTAGGTTAAACGTTTTTT+GGG + chr2_3:30248795-30248814 None:intergenic 20.0%
!!! TTTTTAGGTTAAACGTTTTT+TGG + chr2_3:30248796-30248815 None:intergenic 20.0%
!!! AAGTTAAAATTGTTTCTTCA+GGG + chr2_3:30248846-30248865 None:intergenic 20.0%
!!! TAAGTTAAAATTGTTTCTTC+AGG + chr2_3:30248847-30248866 None:intergenic 20.0%
!! CTAAAAAAGAAAATTCCAAT+GGG - chr2_3:30248883-30248902 Msa0287410:intron 20.0%
!! ACACGAAATATATAGAATAA+AGG - chr2_3:30248974-30248993 Msa0287410:intron 20.0%
!! CACGAAATATATAGAATAAA+GGG - chr2_3:30248975-30248994 Msa0287410:intron 20.0%
!! ACGAAATATATAGAATAAAG+GGG - chr2_3:30248976-30248995 Msa0287410:intron 20.0%
!!! CTTTTAAGATGATTTTCTAT+AGG - chr2_3:30249373-30249392 Msa0287410:intron 20.0%
!! ACCTTTGACAAAAAAATTTA+AGG - chr2_3:30249452-30249471 Msa0287410:CDS 20.0%
!!! TCCTTAAATTTTTTTGTCAA+AGG + chr2_3:30249456-30249475 None:intergenic 20.0%
!! TTCTTATATTTAGATACAGA+GGG + chr2_3:30249502-30249521 None:intergenic 20.0%
!! ATGTATCTAGTAATTTGAAA+AGG + chr2_3:30249561-30249580 None:intergenic 20.0%
!! TCACTCTTAATAAAAAAAGT+TGG + chr2_3:30249730-30249749 None:intergenic 20.0%
!! AATATAAAAGGTAGCAAAAT+TGG + chr2_3:30250549-30250568 None:intergenic 20.0%
!! AAAAAGAACATTGTATAGAA+AGG + chr2_3:30250825-30250844 None:intergenic 20.0%
!! TAAAAAGAAGAGATGAAATT+AGG - chr2_3:30251013-30251032 Msa0287410:intron 20.0%
!!! ACTTTTCATTTTCTTTATCT+CGG - chr2_3:30251059-30251078 Msa0287410:intron 20.0%
!! ACTTACATTTATCAACATAA+AGG - chr2_3:30251512-30251531 Msa0287410:intron 20.0%
!! AATTGAAAAAATTGTGCAAA+TGG - chr2_3:30251587-30251606 Msa0287410:intron 20.0%
!! ATTGAAAAAATTGTGCAAAT+GGG - chr2_3:30251588-30251607 Msa0287410:intron 20.0%
!!! AATTAACATTTTCTGGTAAA+GGG + chr2_3:30251861-30251880 None:intergenic 20.0%
!! ACATTGAAGTTAATATTGAA+GGG - chr2_3:30252001-30252020 Msa0287410:intron 20.0%
!! TAATTATTATAGAAACCCTA+GGG + chr2_3:30252210-30252229 None:intergenic 20.0%
! TAAAAGAGAGATAAATATCG+TGG + chr2_3:30245029-30245048 None:intergenic 25.0%
! GATTAATCATTTATGAAGCA+CGG + chr2_3:30245389-30245408 None:intergenic 25.0%
! GCTTCATAAATGATTAATCT+CGG - chr2_3:30245390-30245409 Msa0287410:intron 25.0%
! TCAAATACATGTTTGGAAAA+GGG + chr2_3:30245438-30245457 None:intergenic 25.0%
!!! GGAATTACCATTTTAATGTT+AGG - chr2_3:30245480-30245499 Msa0287410:CDS 25.0%
! CAAACTACCTAACATTAAAA+TGG + chr2_3:30245490-30245509 None:intergenic 25.0%
!!! CATTTTAATGTTAGGTAGTT+TGG - chr2_3:30245488-30245507 Msa0287410:CDS 25.0%
! TTAACTATGATTATGAAGCA+TGG - chr2_3:30245554-30245573 Msa0287410:intron 25.0%
! CTTCATAGATTGATTAATCT+CGG - chr2_3:30245779-30245798 Msa0287410:intron 25.0%
! AAAAATACATGGATGGAAAA+GGG + chr2_3:30245827-30245846 None:intergenic 25.0%
! AAAAAATACATGGATGGAAA+AGG + chr2_3:30245828-30245847 None:intergenic 25.0%
!! ATGATAGATGTTGATTAATC+TGG - chr2_3:30245914-30245933 Msa0287410:CDS 25.0%
!! TGATAGATGTTGATTAATCT+GGG - chr2_3:30245915-30245934 Msa0287410:CDS 25.0%
! GAAATTGAATATACGTTTAG+TGG - chr2_3:30245944-30245963 Msa0287410:CDS 25.0%
! TGCAATTTCAAAGACTATAA+TGG + chr2_3:30246099-30246118 None:intergenic 25.0%
! AAAAGTCTTTAATCATTACC+TGG - chr2_3:30246175-30246194 Msa0287410:CDS 25.0%
! AACCCTAAGAAAAAATATTC+GGG + chr2_3:30246211-30246230 None:intergenic 25.0%
! CAACCCTAAGAAAAAATATT+CGG + chr2_3:30246212-30246231 None:intergenic 25.0%
!! TTCAAGTTTAAGGACTAAAT+TGG - chr2_3:30246298-30246317 Msa0287410:intron 25.0%
! ATCATTATTGTAGATTCGTA+GGG - chr2_3:30246389-30246408 Msa0287410:intron 25.0%
! CAGAAAATAGTAAAAAGAAG+TGG + chr2_3:30246422-30246441 None:intergenic 25.0%
!!! TGTTTTGTTTTGTTCTAACT+TGG - chr2_3:30246491-30246510 Msa0287410:intron 25.0%
! AGTAAAACATTATTTACCGA+AGG + chr2_3:30246537-30246556 None:intergenic 25.0%
!! GTTTTACTATTTACTCCTTT+TGG - chr2_3:30246549-30246568 Msa0287410:intron 25.0%
! AATGATAGAAATCACATGAA+CGG - chr2_3:30246729-30246748 Msa0287410:CDS 25.0%
!! TTTACATTTAGGGCATAATT+CGG + chr2_3:30246776-30246795 None:intergenic 25.0%
! CCGCTTAAAATTTACATTTA+GGG + chr2_3:30246786-30246805 None:intergenic 25.0%
!! CCCTAAATGTAAATTTTAAG+CGG - chr2_3:30246783-30246802 Msa0287410:CDS 25.0%
!! CCTAAATGTAAATTTTAAGC+GGG - chr2_3:30246784-30246803 Msa0287410:CDS 25.0%
!! CTAAATGTAAATTTTAAGCG+GGG - chr2_3:30246785-30246804 Msa0287410:CDS 25.0%
! TTCTACGAAAGAATTGAATA+TGG - chr2_3:30246813-30246832 Msa0287410:intron 25.0%
! TATGTGTACACAATTGAATA+TGG - chr2_3:30246874-30246893 Msa0287410:intron 25.0%
! TTAAGAGATTTATCATTCCT+GGG + chr2_3:30246990-30247009 None:intergenic 25.0%
! ATTAAGAGATTTATCATTCC+TGG + chr2_3:30246991-30247010 None:intergenic 25.0%
! TTGTTAGATATGATCTGAAA+AGG - chr2_3:30247143-30247162 Msa0287410:intron 25.0%
! GTAATAGTTACCTTAGTTAA+GGG + chr2_3:30247215-30247234 None:intergenic 25.0%
! TGTAATAGTTACCTTAGTTA+AGG + chr2_3:30247216-30247235 None:intergenic 25.0%
! GTGATACTTAAGTTATCATT+TGG - chr2_3:30247563-30247582 Msa0287410:intron 25.0%
!!! TTTTGAAATTGTTGTAGAAG+CGG - chr2_3:30247744-30247763 Msa0287410:intron 25.0%
!!! TACAAATTTTGGTGTTACTT+TGG - chr2_3:30247940-30247959 Msa0287410:intron 25.0%
!!! AAACTCACCTTTTAATTAGA+AGG - chr2_3:30248162-30248181 Msa0287410:intron 25.0%
! AATACAAATAGTCTATAGAC+TGG + chr2_3:30248425-30248444 None:intergenic 25.0%
! TCTATAGACTATTTGTATTG+TGG - chr2_3:30248426-30248445 Msa0287410:intron 25.0%
!! TGTATGTAAATAATGGAACA+GGG + chr2_3:30248675-30248694 None:intergenic 25.0%
! ATCACACTGTATGTAAATAA+TGG + chr2_3:30248682-30248701 None:intergenic 25.0%
! AGGAATAATGTTAGATAATC+TGG + chr2_3:30248725-30248744 None:intergenic 25.0%
! TAGATTTAAGGGAAAACAAA+AGG + chr2_3:30248745-30248764 None:intergenic 25.0%
!!! TTTAGGTTAAACGTTTTTTG+GGG + chr2_3:30248794-30248813 None:intergenic 25.0%
!!! GAATTTTCTTTTTTAGGTGA+GGG + chr2_3:30248879-30248898 None:intergenic 25.0%
!! CCATTGGAATTTTCTTTTTT+AGG + chr2_3:30248885-30248904 None:intergenic 25.0%
! CCTAAAAAAGAAAATTCCAA+TGG - chr2_3:30248882-30248901 Msa0287410:intron 25.0%
! TATATAGAATAAAGGGGAAT+TGG - chr2_3:30248982-30249001 Msa0287410:intron 25.0%
!!! TAGTTGGTTGATTTGTTATA+CGG - chr2_3:30249038-30249057 Msa0287410:intron 25.0%
!!! GAATAATTGACTTTTATGAC+TGG - chr2_3:30249135-30249154 Msa0287410:intron 25.0%
! GAAGTAAGAAGATTACAAAA+AGG + chr2_3:30249268-30249287 None:intergenic 25.0%
! TCATCTTAAAAGAAACCAAT+GGG + chr2_3:30249365-30249384 None:intergenic 25.0%
! ATCATCTTAAAAGAAACCAA+TGG + chr2_3:30249366-30249385 None:intergenic 25.0%
!! AGATGATTTTCTATAGGATT+TGG - chr2_3:30249379-30249398 Msa0287410:intron 25.0%
!! GATGATTTTCTATAGGATTT+GGG - chr2_3:30249380-30249399 Msa0287410:intron 25.0%
! GTTCTTATATTTAGATACAG+AGG + chr2_3:30249503-30249522 None:intergenic 25.0%
! GTATTAATTAGGGGTTTATT+TGG + chr2_3:30249598-30249617 None:intergenic 25.0%
! AGACTTAGTGGTATTAATTA+GGG + chr2_3:30249608-30249627 None:intergenic 25.0%
! TTAAGAGTGAAAAAATCAGA+AGG - chr2_3:30249740-30249759 Msa0287410:intron 25.0%
! AAGACATGTGAAAAAGAATT+TGG + chr2_3:30249867-30249886 None:intergenic 25.0%
!! TTTTTCTTCACTCTTTATGT+TGG - chr2_3:30250221-30250240 Msa0287410:intron 25.0%
! TACTGTGTTAAATTGAGTAA+GGG - chr2_3:30250386-30250405 Msa0287410:intron 25.0%
!!! TCAACATTTACTGATTTTGA+TGG - chr2_3:30250468-30250487 Msa0287410:intron 25.0%
! TATGTTATATGCATACTCTT+TGG + chr2_3:30250641-30250660 None:intergenic 25.0%
! AAAGAAAATGCAAAAAGATG+AGG - chr2_3:30250984-30251003 Msa0287410:intron 25.0%
! TTTCTGAATATTTCATTCCA+GGG - chr2_3:30251082-30251101 Msa0287410:intron 25.0%
!!! GTGTTATTTTGTTGTTGTAT+TGG - chr2_3:30251185-30251204 Msa0287410:intron 25.0%
! CTTATGATTTATTCATGTTG+TGG - chr2_3:30251226-30251245 Msa0287410:intron 25.0%
! AAATGAAAATGATACTCAGA+AGG - chr2_3:30251396-30251415 Msa0287410:intron 25.0%
!! GTTTGAAGTTGCATATAATT+TGG + chr2_3:30251483-30251502 None:intergenic 25.0%
! AACCTAGATATAGAGATATA+AGG - chr2_3:30251675-30251694 Msa0287410:intron 25.0%
! ACCTAGATATAGAGATATAA+GGG - chr2_3:30251676-30251695 Msa0287410:intron 25.0%
!!! GAATTAACATTTTCTGGTAA+AGG + chr2_3:30251862-30251881 None:intergenic 25.0%
!! ATGTCAGAATTAACATTTTC+TGG + chr2_3:30251868-30251887 None:intergenic 25.0%
! ATCACAATAAAACAGAAGAA+AGG - chr2_3:30251914-30251933 Msa0287410:intron 25.0%
! TCACAATAAAACAGAAGAAA+GGG - chr2_3:30251915-30251934 Msa0287410:intron 25.0%
! TTCAATGTCATAATCAGTAA+AGG + chr2_3:30251989-30252008 None:intergenic 25.0%
! GACATTGAAGTTAATATTGA+AGG - chr2_3:30252000-30252019 Msa0287410:intron 25.0%
! CATTGAAGTTAATATTGAAG+GGG - chr2_3:30252002-30252021 Msa0287410:intron 25.0%
! CTTCAAATCATCTTCTTATT+TGG + chr2_3:30252076-30252095 None:intergenic 25.0%
! TATCAGTTTATGTAAATAGC+AGG - chr2_3:30252102-30252121 Msa0287410:CDS 25.0%
! CTAATTATTATAGAAACCCT+AGG + chr2_3:30252211-30252230 None:intergenic 25.0%
! CGAACTAACTAAAAAGTTTA+AGG - chr2_3:30252262-30252281 Msa0287410:CDS 25.0%
! AAGAAGTCGATTTAGAGAAT+TGG - chr2_3:30244769-30244788 Msa0287410:three_prime_UTR 30.0%
CAAATAAGGTTAATGAAGTG+AGG + chr2_3:30244846-30244865 None:intergenic 30.0%
! TTCATTAACCTTATTTGTGC+TGG - chr2_3:30244849-30244868 Msa0287410:three_prime_UTR 30.0%
CCATAGTTAATCATCAACAA+CGG + chr2_3:30245095-30245114 None:intergenic 30.0%
TTAACTATGGAGCTCAAATA+CGG - chr2_3:30245105-30245124 Msa0287410:CDS 30.0%
ATACAAATTATTAGCCGTGT+CGG + chr2_3:30245143-30245162 None:intergenic 30.0%
! GTTTTGCTTATAATAGTGAC+CGG + chr2_3:30245189-30245208 None:intergenic 30.0%
CATTCATTAAATGATGCATG+TGG - chr2_3:30245224-30245243 Msa0287410:CDS 30.0%
TTGCTTATAATAGTGACATG+AGG - chr2_3:30245305-30245324 Msa0287410:CDS 30.0%
TGCTTATAATAGTGACATGA+GGG - chr2_3:30245306-30245325 Msa0287410:CDS 30.0%
CTCAAATACATGTTTGGAAA+AGG + chr2_3:30245439-30245458 None:intergenic 30.0%
GGAATCACCAATTATGTTTA+TGG - chr2_3:30245510-30245529 Msa0287410:CDS 30.0%
ATTAATCAATCTATGAAGCG+CGG + chr2_3:30245777-30245796 None:intergenic 30.0%
CGTCATAAAAAATACATGGA+TGG + chr2_3:30245834-30245853 None:intergenic 30.0%
! TGAATGATAGATGTTGCTTA+AGG - chr2_3:30245859-30245878 Msa0287410:intron 30.0%
GATCAGAATAAAACTTGACT+CGG + chr2_3:30245888-30245907 None:intergenic 30.0%
TGATTGAAGTTCATGAAATG+TGG - chr2_3:30246016-30246035 Msa0287410:intron 30.0%
ATTGACGAAAGTAGTGTAAT+TGG - chr2_3:30246044-30246063 Msa0287410:intron 30.0%
AAAAAATATTCGGGACACAA+TGG + chr2_3:30246202-30246221 None:intergenic 30.0%
!!! TGTCCCGAATATTTTTTCTT+AGG - chr2_3:30246205-30246224 Msa0287410:CDS 30.0%
!!! GTCCCGAATATTTTTTCTTA+GGG - chr2_3:30246206-30246225 Msa0287410:CDS 30.0%
! CATGGGTATTTTCAATTGTT+TGG - chr2_3:30246235-30246254 Msa0287410:intron 30.0%
!! TTTGCAGTCTTTCAAGTTTA+AGG - chr2_3:30246288-30246307 Msa0287410:intron 30.0%
TTCAAATCGGAGACTATTAT+AGG - chr2_3:30246328-30246347 Msa0287410:intron 30.0%
!! AATGATGTGCATTTTGCTAT+GGG + chr2_3:30246375-30246394 None:intergenic 30.0%
! TAATGATGTGCATTTTGCTA+TGG + chr2_3:30246376-30246395 None:intergenic 30.0%
CATCATTATTGTAGATTCGT+AGG - chr2_3:30246388-30246407 Msa0287410:intron 30.0%
AAACAAAGAAATGGTCCAAA+AGG + chr2_3:30246567-30246586 None:intergenic 30.0%
TTCAATTGGAAATACACAAC+CGG - chr2_3:30246588-30246607 Msa0287410:intron 30.0%
!! AATCTATGTTTTTGTCCTCA+AGG + chr2_3:30246695-30246714 None:intergenic 30.0%
CCCGCTTAAAATTTACATTT+AGG + chr2_3:30246787-30246806 None:intergenic 30.0%
CTCAATAAAACAACTAGGAT+AGG + chr2_3:30247028-30247047 None:intergenic 30.0%
AGATCTGATCCCAAAATTAT+AGG + chr2_3:30247187-30247206 None:intergenic 30.0%
AGTACTGTAATCAGATTTGT+TGG + chr2_3:30247267-30247286 None:intergenic 30.0%
TAGTTGAATTTCATGCAAAC+AGG - chr2_3:30247316-30247335 Msa0287410:intron 30.0%
AGTTGAATTTCATGCAAACA+GGG - chr2_3:30247317-30247336 Msa0287410:intron 30.0%
TCTATGTTAAAGTCTTCAAG+AGG + chr2_3:30247387-30247406 None:intergenic 30.0%
ATAGAAGTTGAAGATCAAAG+TGG - chr2_3:30247402-30247421 Msa0287410:intron 30.0%
!!! GTGAGGGTTTTAAATATGAA+AGG - chr2_3:30247515-30247534 Msa0287410:intron 30.0%
TGAAAGGACAATATACCATT+TGG - chr2_3:30247531-30247550 Msa0287410:intron 30.0%
TACTTAAGTTATCATTTGGC+AGG - chr2_3:30247567-30247586 Msa0287410:intron 30.0%
ACTTAAGTTATCATTTGGCA+GGG - chr2_3:30247568-30247587 Msa0287410:intron 30.0%
CATCTTTGTAATTTCCCTTT+CGG + chr2_3:30247640-30247659 None:intergenic 30.0%
TCATATTACATTGAGCACAA+TGG + chr2_3:30247793-30247812 None:intergenic 30.0%
ATTGTGCTCAATGTAATATG+AGG - chr2_3:30247792-30247811 Msa0287410:intron 30.0%
AATTATGTTCGAAAACTCCT+TGG + chr2_3:30247886-30247905 None:intergenic 30.0%
TATTCATTAACCAGCCATAA+AGG - chr2_3:30248024-30248043 Msa0287410:intron 30.0%
TTGTGATAGCTTAACCTTTA+TGG + chr2_3:30248041-30248060 None:intergenic 30.0%
!! TCACCTTTTAATTAGAAGGA+TGG - chr2_3:30248166-30248185 Msa0287410:intron 30.0%
!! CACCTTTTAATTAGAAGGAT+GGG - chr2_3:30248167-30248186 Msa0287410:intron 30.0%
!! ACCTTTTAATTAGAAGGATG+GGG - chr2_3:30248168-30248187 Msa0287410:intron 30.0%
ATTGCCGATGACTATTAAAT+AGG + chr2_3:30248525-30248544 None:intergenic 30.0%
! GTATGTAAATAATGGAACAG+GGG + chr2_3:30248674-30248693 None:intergenic 30.0%
! CTGTATGTAAATAATGGAAC+AGG + chr2_3:30248676-30248695 None:intergenic 30.0%
CTCTCGTCAATTAGATTTAA+GGG + chr2_3:30248756-30248775 None:intergenic 30.0%
TCTCTCGTCAATTAGATTTA+AGG + chr2_3:30248757-30248776 None:intergenic 30.0%
!!! GGAATTTTCTTTTTTAGGTG+AGG + chr2_3:30248880-30248899 None:intergenic 30.0%
!! AGAGCAATTAGTTTGTTAGT+TGG - chr2_3:30249022-30249041 Msa0287410:intron 30.0%
CATCTTAAAAGAAACCAATG+GGG + chr2_3:30249364-30249383 None:intergenic 30.0%
TGAAAAGGAACTTATGTGTA+GGG + chr2_3:30249546-30249565 None:intergenic 30.0%
TTGAAAAGGAACTTATGTGT+AGG + chr2_3:30249547-30249566 None:intergenic 30.0%
GACTTAGTGGTATTAATTAG+GGG + chr2_3:30249607-30249626 None:intergenic 30.0%
GAGACTTAGTGGTATTAATT+AGG + chr2_3:30249609-30249628 None:intergenic 30.0%
ATTAATACCACTAAGTCTCT+TGG - chr2_3:30249610-30249629 Msa0287410:intron 30.0%
TAATATTCCAAGAGACTTAG+TGG + chr2_3:30249620-30249639 None:intergenic 30.0%
! TTTTCCACATACACATACAA+AGG - chr2_3:30249650-30249669 Msa0287410:CDS 30.0%
TTTCCACATACACATACAAA+GGG - chr2_3:30249651-30249670 Msa0287410:CDS 30.0%
!! ACACATACAAAGGGTATTAT+AGG - chr2_3:30249660-30249679 Msa0287410:CDS 30.0%
!!! ATCAGAAGGTGCTTTTATAT+AGG - chr2_3:30249754-30249773 Msa0287410:intron 30.0%
! TTTGAAATTCTCAAGCTACT+GGG - chr2_3:30250166-30250185 Msa0287410:intron 30.0%
!!! TTGGCTGAACTTTTTTACAT+AGG - chr2_3:30250240-30250259 Msa0287410:intron 30.0%
CTTACTCAATTTAACACAGT+AGG + chr2_3:30250387-30250406 None:intergenic 30.0%
CTACTGTGTTAAATTGAGTA+AGG - chr2_3:30250385-30250404 Msa0287410:intron 30.0%
ACTGTGTTAAATTGAGTAAG+GGG - chr2_3:30250387-30250406 Msa0287410:intron 30.0%
AAACAATGATACCGAAAAAC+TGG + chr2_3:30250435-30250454 None:intergenic 30.0%
TTTCGGTATCATTGTTTGAT+CGG - chr2_3:30250438-30250457 Msa0287410:intron 30.0%
! CTTCTTTGAAAGAGAAAATG+AGG + chr2_3:30250595-30250614 None:intergenic 30.0%
CTCTTTCAAAGAAGAAGAAA+AGG - chr2_3:30250601-30250620 Msa0287410:intron 30.0%
!! TTATCACTTGTTATGAGCAT+GGG - chr2_3:30250874-30250893 Msa0287410:intron 30.0%
GAATGAACAATCAAGATGTT+GGG - chr2_3:30250929-30250948 Msa0287410:intron 30.0%
AATGAACAATCAAGATGTTG+GGG - chr2_3:30250930-30250949 Msa0287410:intron 30.0%
AAAGAAGAGATGAAATTAGG+TGG - chr2_3:30251016-30251035 Msa0287410:intron 30.0%
AAGAAGAGATGAAATTAGGT+GGG - chr2_3:30251017-30251036 Msa0287410:intron 30.0%
GTTTCTGAATATTTCATTCC+AGG - chr2_3:30251081-30251100 Msa0287410:intron 30.0%
! TTGTGAAACACTTTTACACT+TGG + chr2_3:30251306-30251325 None:intergenic 30.0%
! TGTAAATCAGAATTGGTTTC+TGG + chr2_3:30251442-30251461 None:intergenic 30.0%
AGAAACCAATTCTGATTTAC+AGG - chr2_3:30251441-30251460 Msa0287410:intron 30.0%
TGTTACCTGTAAATCAGAAT+TGG + chr2_3:30251449-30251468 None:intergenic 30.0%
ACCCTTATATCTCTATATCT+AGG + chr2_3:30251680-30251699 None:intergenic 30.0%
ACATTCTAGACCAAATGAAT+GGG - chr2_3:30251884-30251903 Msa0287410:intron 30.0%
TAGCAGGATTATAAAGACAA+TGG - chr2_3:30252118-30252137 Msa0287410:CDS 30.0%
ATCTCATGTAAATATCTGGA+TGG - chr2_3:30252167-30252186 Msa0287410:CDS 30.0%
TCTCATGTAAATATCTGGAT+GGG - chr2_3:30252168-30252187 Msa0287410:CDS 30.0%
TGTGAAGAATTTCTTACTCT+TGG - chr2_3:30252402-30252421 Msa0287410:five_prime_UTR 30.0%
! TTTCTCTTTTTCTCGAGTAG+TGG + chr2_3:30244667-30244686 None:intergenic 35.0%
AATTGAAGATAGCAGGAACA+TGG - chr2_3:30244733-30244752 Msa0287410:three_prime_UTR 35.0%
TTCTTCACGTAACGAAGAAA+TGG + chr2_3:30244796-30244815 None:intergenic 35.0%
GAATTCTACCAGCACAAATA+AGG + chr2_3:30244860-30244879 None:intergenic 35.0%
ACCTAATTGAGTTAGGGTTA+GGG + chr2_3:30244901-30244920 None:intergenic 35.0%
TACCTAATTGAGTTAGGGTT+AGG + chr2_3:30244902-30244921 None:intergenic 35.0%
!! CCGTTGTTGATGATTAACTA+TGG - chr2_3:30245092-30245111 Msa0287410:CDS 35.0%
ACCAATTATGTTTATGGTGC+TGG - chr2_3:30245516-30245535 Msa0287410:CDS 35.0%
ACCAGCACCATAAACATAAT+TGG + chr2_3:30245520-30245539 None:intergenic 35.0%
TGTCGTGTCAAAATCACATT+CGG - chr2_3:30245671-30245690 Msa0287410:CDS 35.0%
GTCGCGTCATAAAAAATACA+TGG + chr2_3:30245838-30245857 None:intergenic 35.0%
!! TAGTCTTTGAAATTGCACTC+TGG - chr2_3:30246102-30246121 Msa0287410:CDS 35.0%
! TTTTTCTTAGGGTTGTGACA+TGG - chr2_3:30246217-30246236 Msa0287410:intron 35.0%
! TTTTCTTAGGGTTGTGACAT+GGG - chr2_3:30246218-30246237 Msa0287410:intron 35.0%
GAAAGACTGCAAAAATTCCT+AGG + chr2_3:30246281-30246300 None:intergenic 35.0%
ACAAAACAGAGAATGAGTTC+AGG + chr2_3:30246479-30246498 None:intergenic 35.0%
! ACACACACTTTGTTACTTAC+CGG + chr2_3:30246610-30246629 None:intergenic 35.0%
CATGTGATTTCTATCATTCG+AGG + chr2_3:30246727-30246746 None:intergenic 35.0%
!! TTTGATTTGGTATGTCCCTT+CGG - chr2_3:30247059-30247078 Msa0287410:CDS 35.0%
GATCTAACATCCCTTAACTA+AGG - chr2_3:30247202-30247221 Msa0287410:intron 35.0%
ATTCAACTAAGCTTCAGAGA+GGG + chr2_3:30247305-30247324 None:intergenic 35.0%
AATTCAACTAAGCTTCAGAG+AGG + chr2_3:30247306-30247325 None:intergenic 35.0%
AATAATTCCACCAAGATGCA+TGG + chr2_3:30247485-30247504 None:intergenic 35.0%
TATCACTTCAACAGTCCAAA+TGG + chr2_3:30247549-30247568 None:intergenic 35.0%
GGTTAAGCTATCACAATACA+TGG - chr2_3:30248045-30248064 Msa0287410:intron 35.0%
GCCAACACTTTAAACCAAAA+GGG + chr2_3:30248114-30248133 None:intergenic 35.0%
TGCCAACACTTTAAACCAAA+AGG + chr2_3:30248115-30248134 None:intergenic 35.0%
!!! TTTTGGTTTAAAGTGTTGGC+AGG - chr2_3:30248114-30248133 Msa0287410:intron 35.0%
!! TTTGGTTTAAAGTGTTGGCA+GGG - chr2_3:30248115-30248134 Msa0287410:intron 35.0%
AGTTTCAGCAAAAGGTAGAT+GGG + chr2_3:30248147-30248166 None:intergenic 35.0%
AAAAGGTGAGTTTCAGCAAA+AGG + chr2_3:30248155-30248174 None:intergenic 35.0%
!! CCTTTTAATTAGAAGGATGG+GGG - chr2_3:30248169-30248188 Msa0287410:intron 35.0%
! TTAAAGCCTTTTTGACCAAG+TGG + chr2_3:30248212-30248231 None:intergenic 35.0%
TTGTGATCCAAAAGTCATTG+AGG - chr2_3:30248391-30248410 Msa0287410:intron 35.0%
GCTGCCTATTTAATAGTCAT+CGG - chr2_3:30248518-30248537 Msa0287410:intron 35.0%
CTTTATATGCTCATTCCCAT+TGG + chr2_3:30248901-30248920 None:intergenic 35.0%
GGAATGAGCATATAAAGTTG+TGG - chr2_3:30248904-30248923 Msa0287410:intron 35.0%
TGTTCATAGCTTGAACATCA+TGG + chr2_3:30248957-30248976 None:intergenic 35.0%
! TAGTGTGTGTTATTGTTGCT+AGG - chr2_3:30249071-30249090 Msa0287410:intron 35.0%
AGCCTCAATGAATAGAAAAG+AGG - chr2_3:30249103-30249122 Msa0287410:intron 35.0%
GCCTCAATGAATAGAAAAGA+GGG - chr2_3:30249104-30249123 Msa0287410:intron 35.0%
! TCCCTCTTTTCTATTCATTG+AGG + chr2_3:30249108-30249127 None:intergenic 35.0%
ATTTGGGCATTCAAAGTGAA+GGG - chr2_3:30249396-30249415 Msa0287410:intron 35.0%
ATACCCTTTGTATGTGTATG+TGG + chr2_3:30249657-30249676 None:intergenic 35.0%
!!! GAAGGTGCTTTTATATAGGA+CGG - chr2_3:30249758-30249777 Msa0287410:intron 35.0%
! AAGAATTTGGCTCCTCTAAA+GGG + chr2_3:30249854-30249873 None:intergenic 35.0%
! AAAGAATTTGGCTCCTCTAA+AGG + chr2_3:30249855-30249874 None:intergenic 35.0%
TCCAATACTGCAAATTGACA+TGG - chr2_3:30249946-30249965 Msa0287410:intron 35.0%
ACCATGTCAATTTGCAGTAT+TGG + chr2_3:30249950-30249969 None:intergenic 35.0%
TACTGCAAATTGACATGGTA+TGG - chr2_3:30249951-30249970 Msa0287410:intron 35.0%
ATTAGATGGTTATCAGATGC+TGG - chr2_3:30249995-30250014 Msa0287410:intron 35.0%
CAGTAGCTTGAGAATTTCAA+AGG + chr2_3:30250167-30250186 None:intergenic 35.0%
!! CTTTGAAATTCTCAAGCTAC+TGG - chr2_3:30250165-30250184 Msa0287410:intron 35.0%
ATACCGAAAAACTGGAACAT+GGG + chr2_3:30250427-30250446 None:intergenic 35.0%
AAAGAGAAAATGAGGCTGAA+GGG + chr2_3:30250587-30250606 None:intergenic 35.0%
TACTCTCCTATACAATGAAG+TGG - chr2_3:30250673-30250692 Msa0287410:intron 35.0%
AATGCTCCACTTCATTGTAT+AGG + chr2_3:30250682-30250701 None:intergenic 35.0%
TGAATCATGGATTCAGTCTT+TGG - chr2_3:30250749-30250768 Msa0287410:intron 35.0%
CATGCTCATAACAAGTGATA+AGG + chr2_3:30250875-30250894 None:intergenic 35.0%
!! CTTATCACTTGTTATGAGCA+TGG - chr2_3:30250873-30250892 Msa0287410:intron 35.0%
CGAATGAACAATCAAGATGT+TGG - chr2_3:30250928-30250947 Msa0287410:intron 35.0%
TGAACGAATTGGTCACTATT+GGG - chr2_3:30251159-30251178 Msa0287410:intron 35.0%
TGTTGTTGTATTGGATGCAT+TGG - chr2_3:30251194-30251213 Msa0287410:intron 35.0%
! AAATGATACTCAGAAGGCAT+TGG - chr2_3:30251402-30251421 Msa0287410:intron 35.0%
TAAAGGTTAAGATCGAGTCA+AGG - chr2_3:30251529-30251548 Msa0287410:intron 35.0%
TTAAGATCGAGTCAAGGAAA+AGG - chr2_3:30251535-30251554 Msa0287410:intron 35.0%
!!! ATGGGTTTTGAAAGATCAAG+AGG - chr2_3:30251606-30251625 Msa0287410:intron 35.0%
!! TCACTTTTAGCACATTACTG+TGG + chr2_3:30251655-30251674 None:intergenic 35.0%
GATATACTTATTCTCTGCAG+TGG - chr2_3:30251705-30251724 Msa0287410:intron 35.0%
!!! AATTCAACTGCTGCTTTTGA+TGG - chr2_3:30251817-30251836 Msa0287410:intron 35.0%
GACATTCTAGACCAAATGAA+TGG - chr2_3:30251883-30251902 Msa0287410:intron 35.0%
CATTCTAGACCAAATGAATG+GGG - chr2_3:30251885-30251904 Msa0287410:intron 35.0%
TAAAACAGAAGAAAGGGATG+TGG - chr2_3:30251921-30251940 Msa0287410:intron 35.0%
AGGGATCTCATGTAAATATC+TGG - chr2_3:30252163-30252182 Msa0287410:CDS 35.0%
AGAATTTCTTACTCTTGGTG+TGG - chr2_3:30252407-30252426 Msa0287410:five_prime_UTR 35.0%
CATCAATCAACAGAATCGAG+TGG - chr2_3:30244691-30244710 Msa0287410:three_prime_UTR 40.0%
ATGGCGAAATTGAAGATAGC+AGG - chr2_3:30244726-30244745 Msa0287410:three_prime_UTR 40.0%
GAAGTGAGGATTATCGCAAT+TGG + chr2_3:30244832-30244851 None:intergenic 40.0%
! TTGTGCTGGTAGAATTCTCA+AGG - chr2_3:30244863-30244882 Msa0287410:three_prime_UTR 40.0%
ACCCTAACCCTAACTCAATT+AGG - chr2_3:30244897-30244916 Msa0287410:three_prime_UTR 40.0%
TTGAGGAACAAAGCTCTCAT+AGG - chr2_3:30244985-30245004 Msa0287410:exon 40.0%
CAGTGTAATTATACACCCTC+CGG - chr2_3:30245167-30245186 Msa0287410:CDS 40.0%
TGCTTATAATAGTGACCGGA+GGG + chr2_3:30245185-30245204 None:intergenic 40.0%
TTGCTTATAATAGTGACCGG+AGG + chr2_3:30245186-30245205 None:intergenic 40.0%
! CAGTGTTGTAAGTGTTGTGT+CGG - chr2_3:30245338-30245357 Msa0287410:CDS 40.0%
! AGTGTTGTAAGTGTTGTGTC+GGG - chr2_3:30245339-30245358 Msa0287410:CDS 40.0%
CATTCGGTAGTTATATGCGT+CGG - chr2_3:30245687-30245706 Msa0287410:CDS 40.0%
GATTCGCTAACTAGCTAACA+TGG + chr2_3:30246075-30246094 None:intergenic 40.0%
!! CACTTGGTGCATGCTAAAAA+TGG + chr2_3:30246452-30246471 None:intergenic 40.0%
AATGAGTTCAGGTCTACACT+TGG + chr2_3:30246468-30246487 None:intergenic 40.0%
GGCAATTAGACCATATGCAT+CGG + chr2_3:30246755-30246774 None:intergenic 40.0%
!! TCCTGGGCTAAAAAGTGTTT+GGG + chr2_3:30246974-30246993 None:intergenic 40.0%
!! TTCCTGGGCTAAAAAGTGTT+TGG + chr2_3:30246975-30246994 None:intergenic 40.0%
!! TTGATTTGGTATGTCCCTTC+GGG - chr2_3:30247060-30247079 Msa0287410:CDS 40.0%
AATGCATGTACAATCCCGAA+GGG + chr2_3:30247077-30247096 None:intergenic 40.0%
AAATGCATGTACAATCCCGA+AGG + chr2_3:30247078-30247097 None:intergenic 40.0%
TAGGATCAGAGATTGATCAG+AGG - chr2_3:30247439-30247458 Msa0287410:intron 40.0%
TGCAGAATTTCCATGCATCT+TGG - chr2_3:30247472-30247491 Msa0287410:intron 40.0%
AGAATTTCCATGCATCTTGG+TGG - chr2_3:30247475-30247494 Msa0287410:intron 40.0%
GATAGCTTAACCTTTATGGC+TGG + chr2_3:30248037-30248056 None:intergenic 40.0%
!!! GCCCTTTTGGTTTAAAGTGT+TGG - chr2_3:30248110-30248129 Msa0287410:intron 40.0%
GAGTTTCAGCAAAAGGTAGA+TGG + chr2_3:30248148-30248167 None:intergenic 40.0%
CCCCCATCCTTCTAATTAAA+AGG + chr2_3:30248172-30248191 None:intergenic 40.0%
TTTAATTAGAAGGATGGGGG+TGG - chr2_3:30248172-30248191 Msa0287410:intron 40.0%
CCTGCAAAGCAAATTACACA+TGG + chr2_3:30248358-30248377 None:intergenic 40.0%
!! CCATGTGTAATTTGCTTTGC+AGG - chr2_3:30248355-30248374 Msa0287410:intron 40.0%
! CTACTCACCTCAATGACTTT+TGG + chr2_3:30248401-30248420 None:intergenic 40.0%
AAGAATTGGAACAATCGCCT+TGG - chr2_3:30248555-30248574 Msa0287410:intron 40.0%
! TGCAACTCTGCAGAATTTTG+AGG - chr2_3:30248579-30248598 Msa0287410:intron 40.0%
! GCAACTCTGCAGAATTTTGA+GGG - chr2_3:30248580-30248599 Msa0287410:intron 40.0%
! TCTGGTTCGTTAGTTAGAGT+AGG + chr2_3:30248707-30248726 None:intergenic 40.0%
!! TGTGTACTTTTTGCTTTCCC+TGG - chr2_3:30249197-30249216 Msa0287410:intron 40.0%
GAAATGATCCCAACAGAATG+CGG - chr2_3:30249332-30249351 Msa0287410:intron 40.0%
GGAATTAACCGCATTCTGTT+GGG + chr2_3:30249343-30249362 None:intergenic 40.0%
GATTTGGGCATTCAAAGTGA+AGG - chr2_3:30249395-30249414 Msa0287410:intron 40.0%
AGAGGGAGTAATGAATTACG+AGG + chr2_3:30249485-30249504 None:intergenic 40.0%
! GTGCTTTTATATAGGACGGA+GGG - chr2_3:30249762-30249781 Msa0287410:intron 40.0%
! AGAATTTGGCTCCTCTAAAG+GGG + chr2_3:30249853-30249872 None:intergenic 40.0%
!! TATGGTGCTACTTCATGCTA+CGG - chr2_3:30249969-30249988 Msa0287410:intron 40.0%
!! AACAAACTTCGCTTTTGCAG+AGG + chr2_3:30250342-30250361 None:intergenic 40.0%
! TGCAAAAGCGAAGTTTGTTC+AGG - chr2_3:30250343-30250362 Msa0287410:intron 40.0%
! AAAGCGAAGTTTGTTCAGGT+AGG - chr2_3:30250347-30250366 Msa0287410:intron 40.0%
! CTTCCCATGTTCCAGTTTTT+CGG - chr2_3:30250421-30250440 Msa0287410:intron 40.0%
GATACCGAAAAACTGGAACA+TGG + chr2_3:30250428-30250447 None:intergenic 40.0%
AAGAGAAAATGAGGCTGAAG+GGG + chr2_3:30250586-30250605 None:intergenic 40.0%
GAAAGAGAAAATGAGGCTGA+AGG + chr2_3:30250588-30250607 None:intergenic 40.0%
! TGGAGCATTAATGCAACAGT+TGG - chr2_3:30250693-30250712 Msa0287410:intron 40.0%
! GGAGATGTTTTCGTGTGATT+AGG - chr2_3:30250714-30250733 Msa0287410:intron 40.0%
! GATGTTTTCGTGTGATTAGG+AGG - chr2_3:30250717-30250736 Msa0287410:intron 40.0%
GAGGTCATAGGTTTGAATCA+TGG - chr2_3:30250736-30250755 Msa0287410:intron 40.0%
GCCTACAATAGAATCGTGAT+CGG - chr2_3:30250790-30250809 Msa0287410:intron 40.0%
ACCGATCACGATTCTATTGT+AGG + chr2_3:30250794-30250813 None:intergenic 40.0%
!! TGCCATTGATTTCCTTGTTG+AGG - chr2_3:30250954-30250973 Msa0287410:intron 40.0%
CTCCTCAACAAGGAAATCAA+TGG + chr2_3:30250959-30250978 None:intergenic 40.0%
TGATTTCCTTGTTGAGGAGA+AGG - chr2_3:30250960-30250979 Msa0287410:intron 40.0%
CTGAACGAATTGGTCACTAT+TGG - chr2_3:30251158-30251177 Msa0287410:intron 40.0%
CTGCGATGTAAGAAGTTTGA+TGG + chr2_3:30251340-30251359 None:intergenic 40.0%
CATCAAACTTCTTACATCGC+AGG - chr2_3:30251338-30251357 Msa0287410:intron 40.0%
GCAGCAGTTGAATTCATTTG+AGG + chr2_3:30251811-30251830 None:intergenic 40.0%
!!! ACTGCTGCTTTTGATGGTAT+TGG - chr2_3:30251823-30251842 Msa0287410:intron 40.0%
GATCTTCAACCCCATTCATT+TGG + chr2_3:30251897-30251916 None:intergenic 40.0%
CTCTCTGCAGATATAGCTAA+AGG - chr2_3:30251958-30251977 Msa0287410:intron 40.0%
CATAGACAGGTACTCAGTTA+TGG + chr2_3:30252031-30252050 None:intergenic 40.0%
CATAACTGAGTACCTGTCTA+TGG - chr2_3:30252029-30252048 Msa0287410:intron 40.0%
! TGTTTCTGCTCTTTGATGCA+GGG - chr2_3:30252144-30252163 Msa0287410:CDS 40.0%
TACATTTGTGCTCATTCCCT+AGG - chr2_3:30252191-30252210 Msa0287410:CDS 40.0%
ACATTTGTGCTCATTCCCTA+GGG - chr2_3:30252192-30252211 Msa0287410:CDS 40.0%
AAGATAGCAGGAACATGGTC+AGG - chr2_3:30244738-30244757 Msa0287410:three_prime_UTR 45.0%
AGTGACAGTAGCGAGAATCT+TGG + chr2_3:30244937-30244956 None:intergenic 45.0%
! TACTGTCACTTCTCCTCAAC+AGG - chr2_3:30244947-30244966 Msa0287410:three_prime_UTR 45.0%
! ACTGTCACTTCTCCTCAACA+GGG - chr2_3:30244948-30244967 Msa0287410:three_prime_UTR 45.0%
! CTCATAGGCTTGCTCGTATT+AGG - chr2_3:30245000-30245019 Msa0287410:exon 45.0%
GCGTTGTTGTGTCAAACACT+GGG - chr2_3:30245729-30245748 Msa0287410:intron 45.0%
TCTCGGTTGAGAAACCTTAG+CGG - chr2_3:30245796-30245815 Msa0287410:intron 45.0%
AATTGCACTCTGGCGCAATT+TGG - chr2_3:30246112-30246131 Msa0287410:CDS 45.0%
!! TCCCAAACACTTTTTAGCCC+AGG - chr2_3:30246970-30246989 Msa0287410:CDS 45.0%
! AGTGGACAGAAAGTACGCTT+AGG - chr2_3:30247420-30247439 Msa0287410:intron 45.0%
ATTTGGCAGGGCAGTAATGA+TGG - chr2_3:30247580-30247599 Msa0287410:intron 45.0%
TTTGGCAGGGCAGTAATGAT+GGG - chr2_3:30247581-30247600 Msa0287410:intron 45.0%
GGACTGATGCTTCATGCAAA+GGG - chr2_3:30247602-30247621 Msa0287410:intron 45.0%
GACTGATGCTTCATGCAAAG+GGG - chr2_3:30247603-30247622 Msa0287410:intron 45.0%
!!! GGGAAGCGTTTTATCCGAAA+GGG - chr2_3:30247623-30247642 Msa0287410:intron 45.0%
! TGCACTTGAAGTGCTTACCA+TGG - chr2_3:30247658-30247677 Msa0287410:intron 45.0%
! GCACTTGAAGTGCTTACCAT+GGG - chr2_3:30247659-30247678 Msa0287410:intron 45.0%
TAAGGAACTAACCTCTCCCA+TGG + chr2_3:30247678-30247697 None:intergenic 45.0%
CTCAAACATGTCCTCTCATG+AGG - chr2_3:30248086-30248105 Msa0287410:intron 45.0%
ATTCTGCAGAGTTGCAACCA+AGG + chr2_3:30248575-30248594 None:intergenic 45.0%
! ACTGGTTAGTCCAGCATGAA+AGG - chr2_3:30249153-30249172 Msa0287410:intron 45.0%
! AGAGCACTTTCCTTTCATGC+TGG + chr2_3:30249166-30249185 None:intergenic 45.0%
AACTGTACCATGCAAGACCA+GGG + chr2_3:30249217-30249236 None:intergenic 45.0%
AAACTGTACCATGCAAGACC+AGG + chr2_3:30249218-30249237 None:intergenic 45.0%
GGGAATTAACCGCATTCTGT+TGG + chr2_3:30249344-30249363 None:intergenic 45.0%
GAATGCGGTTAATTCCCCAT+TGG - chr2_3:30249347-30249366 Msa0287410:intron 45.0%
GTGAAGGGTTCACTATAGAG+TGG - chr2_3:30249411-30249430 Msa0287410:CDS 45.0%
! GGTGCTTTTATATAGGACGG+AGG - chr2_3:30249761-30249780 Msa0287410:intron 45.0%
! AATTTGGCTCCTCTAAAGGG+GGG + chr2_3:30249851-30249870 None:intergenic 45.0%
! GAATTTGGCTCCTCTAAAGG+GGG + chr2_3:30249852-30249871 None:intergenic 45.0%
!! ATGGTGCTACTTCATGCTAC+GGG - chr2_3:30249970-30249989 Msa0287410:intron 45.0%
TCATGCTACGGGACATTAGA+TGG - chr2_3:30249981-30250000 Msa0287410:intron 45.0%
! AAAGCGCCTTGAAATGGCTA+GGG - chr2_3:30250018-30250037 Msa0287410:intron 45.0%
CAGGAATTGAACGTGCTCAT+GGG - chr2_3:30250041-30250060 Msa0287410:intron 45.0%
AATTGAACGTGCTCATGGGA+AGG - chr2_3:30250045-30250064 Msa0287410:intron 45.0%
ATAACTCACAGTGCAACCTC+TGG + chr2_3:30250109-30250128 None:intergenic 45.0%
TTGAGACTAGAGCTGCTTGA+AGG - chr2_3:30250266-30250285 Msa0287410:intron 45.0%
TGAGACTAGAGCTGCTTGAA+GGG - chr2_3:30250267-30250286 Msa0287410:intron 45.0%
CTTGCCTTGATTTCTCCAAC+TGG + chr2_3:30250313-30250332 None:intergenic 45.0%
CGGTATCATTGTTTGATCGG+AGG - chr2_3:30250441-30250460 Msa0287410:intron 45.0%
TCGTGTGATTAGGAGGTCAT+AGG - chr2_3:30250724-30250743 Msa0287410:intron 45.0%
ACAAGTGATAAGGCCTCATC+TGG + chr2_3:30250865-30250884 None:intergenic 45.0%
TCTTTGCCTTCTCCTCAACA+AGG + chr2_3:30250969-30250988 None:intergenic 45.0%
TTCATTCCAGGGAGCAAAAG+CGG - chr2_3:30251093-30251112 Msa0287410:intron 45.0%
AGATCCACGGCCTTCTTTAA+GGG + chr2_3:30251131-30251150 None:intergenic 45.0%
TCTGGAGAGACTGAACGAAT+TGG - chr2_3:30251148-30251167 Msa0287410:intron 45.0%
CTTACATCGCAGGTTTGAGA+AGG - chr2_3:30251348-30251367 Msa0287410:intron 45.0%
AGAAGAAAGGGATGTGGAGA+TGG - chr2_3:30251927-30251946 Msa0287410:intron 45.0%
! GTGTTTCTGCTCTTTGATGC+AGG - chr2_3:30252143-30252162 Msa0287410:CDS 45.0%
GCTGAGACTGTTCTCAAAGT+AGG - chr2_3:30252352-30252371 Msa0287410:exon 45.0%
GAGACTGTTCTCAAAGTAGG+TGG - chr2_3:30252355-30252374 Msa0287410:exon 45.0%
!! TTATAACTAAAATAAATAAT+TGG + chr2_3:30248472-30248491 None:intergenic 5.0%
!! TATATTGTATATAATATAAA+AGG + chr2_3:30250561-30250580 None:intergenic 5.0%
ACAAGAGACTGACCCTGTTG+AGG + chr2_3:30244963-30244982 None:intergenic 50.0%
!! GGGTCAGTCTCTTGTTGTTG+AGG - chr2_3:30244968-30244987 Msa0287410:three_prime_UTR 50.0%
TGGAGCTCAAATACGGACAC+CGG - chr2_3:30245112-30245131 Msa0287410:CDS 50.0%
TCTCGGTCGAGAAACCTTAG+CGG - chr2_3:30245407-30245426 Msa0287410:intron 50.0%
CGCGTTGTTGTGTCAAACAC+TGG - chr2_3:30245728-30245747 Msa0287410:intron 50.0%
ACTGGGACACACCTTATCTG+AGG - chr2_3:30245746-30245765 Msa0287410:intron 50.0%
CTCGGTTGAGAAACCTTAGC+GGG - chr2_3:30245797-30245816 Msa0287410:intron 50.0%
TCGGTTGAGAAACCTTAGCG+GGG - chr2_3:30245798-30245817 Msa0287410:intron 50.0%
TATTCGGGACACAATGGACC+AGG + chr2_3:30246196-30246215 None:intergenic 50.0%
AGTAGTCAGCTTGGTCCTTG+AGG - chr2_3:30246677-30246696 Msa0287410:intron 50.0%
ACATGAACGGCCGATGCATA+TGG - chr2_3:30246742-30246761 Msa0287410:CDS 50.0%
!! CTGCAACTGCATTGGCTGAA+AGG - chr2_3:30247343-30247362 Msa0287410:intron 50.0%
! TTGGCTGAAAGGCATGCAGA+TGG - chr2_3:30247354-30247373 Msa0287410:intron 50.0%
GGGACTGATGCTTCATGCAA+AGG - chr2_3:30247601-30247620 Msa0287410:intron 50.0%
!!! GGGGAAGCGTTTTATCCGAA+AGG - chr2_3:30247622-30247641 Msa0287410:intron 50.0%
! TGAAGTGCTTACCATGGGAG+AGG - chr2_3:30247664-30247683 Msa0287410:intron 50.0%
AGGGGTCCACTTGGTCAAAA+AGG - chr2_3:30248203-30248222 Msa0287410:intron 50.0%
TATTGCCGCCTTCAGTTGAG+GGG + chr2_3:30248620-30248639 None:intergenic 50.0%
GTATTGCCGCCTTCAGTTGA+GGG + chr2_3:30248621-30248640 None:intergenic 50.0%
AGTATTGCCGCCTTCAGTTG+AGG + chr2_3:30248622-30248641 None:intergenic 50.0%
!!! TTTTTTAGGTGAGGGCTGCG+CGG + chr2_3:30248871-30248890 None:intergenic 50.0%
!! TTGCTTTCCCTGGTCTTGCA+TGG - chr2_3:30249207-30249226 Msa0287410:intron 50.0%
CTAAGTGTTCCCCCCTTTAG+AGG - chr2_3:30249839-30249858 Msa0287410:intron 50.0%
!! TGCTGGAAAGCGCCTTGAAA+TGG - chr2_3:30250012-30250031 Msa0287410:intron 50.0%
!! GAAAGCGCCTTGAAATGGCT+AGG - chr2_3:30250017-30250036 Msa0287410:intron 50.0%
TTCCTGCCCTAGCCATTTCA+AGG + chr2_3:30250027-30250046 None:intergenic 50.0%
GCAGGAATTGAACGTGCTCA+TGG - chr2_3:30250040-30250059 Msa0287410:intron 50.0%
CACCTTGTAAGAGTCTGAGG+CGG + chr2_3:30250078-30250097 None:intergenic 50.0%
GACCACCTTGTAAGAGTCTG+AGG + chr2_3:30250081-30250100 None:intergenic 50.0%
GAGACTAGAGCTGCTTGAAG+GGG - chr2_3:30250268-30250287 Msa0287410:intron 50.0%
GGCATTTCATTCTGGCCAGT+TGG - chr2_3:30250295-30250314 Msa0287410:intron 50.0%
CTGGCCAGTTGGAGAAATCA+AGG - chr2_3:30250306-30250325 Msa0287410:intron 50.0%
! TGAGCATGGGCTACACTCAA+AGG - chr2_3:30250887-30250906 Msa0287410:intron 50.0%
! GAGCATGGGCTACACTCAAA+GGG - chr2_3:30250888-30250907 Msa0287410:intron 50.0%
! ATCCACGGCCTTCTTTAAGG+GGG + chr2_3:30251129-30251148 None:intergenic 50.0%
GATCCACGGCCTTCTTTAAG+GGG + chr2_3:30251130-30251149 None:intergenic 50.0%
CAGATCCACGGCCTTCTTTA+AGG + chr2_3:30251132-30251151 None:intergenic 50.0%
CTTAAAGAAGGCCGTGGATC+TGG - chr2_3:30251130-30251149 Msa0287410:intron 50.0%
GTTCAGTCTCTCCAGATCCA+CGG + chr2_3:30251144-30251163 None:intergenic 50.0%
AAGACTGACAGCACAACCTG+AGG - chr2_3:30251771-30251790 Msa0287410:intron 50.0%
GGTTGCATATTCTCAGCCTC+AGG + chr2_3:30251790-30251809 None:intergenic 50.0%
AGAAAGGGATGTGGAGATGG+AGG - chr2_3:30251930-30251949 Msa0287410:intron 50.0%
CTGCAGACTCAACCATAGAC+AGG + chr2_3:30252044-30252063 None:intergenic 50.0%
CTGTCTATGGTTGAGTCTGC+AGG - chr2_3:30252042-30252061 Msa0287410:intron 50.0%
CGAGTGGAGTGATCGCAACA+TGG - chr2_3:30244707-30244726 Msa0287410:three_prime_UTR 55.0%
ATGAAGCACGGACACTCCTC+AGG + chr2_3:30245377-30245396 None:intergenic 55.0%
CTCGGTCGAGAAACCTTAGC+GGG - chr2_3:30245408-30245427 Msa0287410:intron 55.0%
TCGGTCGAGAAACCTTAGCG+GGG - chr2_3:30245409-30245428 Msa0287410:intron 55.0%
!! CGTCGGTGTCGTGTTAGTGT+CGG - chr2_3:30245704-30245723 Msa0287410:CDS 55.0%
TTCGGCGTGAGTAGTCAGCT+TGG - chr2_3:30246668-30246687 Msa0287410:intron 55.0%
TAGGGTACACGTACACGCCA+AGG - chr2_3:30247866-30247885 Msa0287410:intron 55.0%
CCAAAAGGGCTCCTCATGAG+AGG + chr2_3:30248100-30248119 None:intergenic 55.0%
! CCTCTCATGAGGAGCCCTTT+TGG - chr2_3:30248097-30248116 Msa0287410:intron 55.0%
CCTTCAGTTGAGGGGTTTGG+AGG + chr2_3:30248612-30248631 None:intergenic 55.0%
CCTCCAAACCCCTCAACTGA+AGG - chr2_3:30248609-30248628 Msa0287410:intron 55.0%
CCAAACCCCTCAACTGAAGG+CGG - chr2_3:30248612-30248631 Msa0287410:intron 55.0%
CTCCGCCTCAGACTCTTACA+AGG - chr2_3:30250073-30250092 Msa0287410:intron 55.0%
CGCCTCAGACTCTTACAAGG+TGG - chr2_3:30250076-30250095 Msa0287410:intron 55.0%
ACAAGGTGGTCGCTATCCAG+AGG - chr2_3:30250090-30250109 Msa0287410:intron 55.0%
ACTAGAGCTGCTTGAAGGGG+TGG - chr2_3:30250271-30250290 Msa0287410:intron 55.0%
! GGGGTGGTGGCATTTCATTC+TGG - chr2_3:30250287-30250306 Msa0287410:intron 55.0%
ACAGCTGCAAGTGCCAGATG+AGG - chr2_3:30250849-30250868 Msa0287410:intron 55.0%
TCCAGGGAGCAAAAGCGGTA+TGG - chr2_3:30251098-30251117 Msa0287410:intron 55.0%
CCAGGGAGCAAAAGCGGTAT+GGG - chr2_3:30251099-30251118 Msa0287410:intron 55.0%
CAGGGAGCAAAAGCGGTATG+GGG - chr2_3:30251100-30251119 Msa0287410:intron 55.0%
TGGGGTGACCCCCTTAAAGA+AGG - chr2_3:30251118-30251137 Msa0287410:intron 55.0%
!!! TGCAGTGGTCGCTGCTTTTG+AGG - chr2_3:30251720-30251739 Msa0287410:intron 55.0%
!!! GTGGTCGCTGCTTTTGAGGA+AGG - chr2_3:30251724-30251743 Msa0287410:intron 55.0%
!!! GTCGCTGCTTTTGAGGAAGG+CGG - chr2_3:30251727-30251746 Msa0287410:intron 55.0%
! ATTAGCCGTGTCGGCGTGTC+CGG + chr2_3:30245134-30245153 None:intergenic 60.0%
! AAGTGTTGTGTCGGGCGTCC+TGG - chr2_3:30245347-30245366 Msa0287410:intron 60.0%
! GGACACTCCTCAGGTTGTCC+AGG + chr2_3:30245368-30245387 None:intergenic 60.0%
GGAAAAGGGAGACCCCGCTA+AGG + chr2_3:30245424-30245443 None:intergenic 60.0%
GCGCGGACACTCCTCAGATA+AGG + chr2_3:30245760-30245779 None:intergenic 60.0%
GGAAAAGGGAGACCCCGCTA+AGG + chr2_3:30245424-30245443 None:intergenic 60.0%
CAGGGCAGCTGCAACTGCAT+TGG - chr2_3:30247335-30247354 Msa0287410:intron 60.0%
TAGAAGGATGGGGGTGGCAG+TGG - chr2_3:30248178-30248197 Msa0287410:intron 60.0%
CCGCCTTCAGTTGAGGGGTT+TGG + chr2_3:30248615-30248634 None:intergenic 60.0%
CGCCTTGAAATGGCTAGGGC+AGG - chr2_3:30250022-30250041 Msa0287410:intron 60.0%
AGAGCTGCTTGAAGGGGTGG+TGG - chr2_3:30250274-30250293 Msa0287410:intron 60.0%
!! CCCATACCGCTTTTGCTCCC+TGG + chr2_3:30251102-30251121 None:intergenic 60.0%
GACCCCCTTAAAGAAGGCCG+TGG - chr2_3:30251124-30251143 Msa0287410:intron 60.0%
GATGGGGGTGGCAGTGGCAA+GGG - chr2_3:30248184-30248203 Msa0287410:intron 65.0%
ATGGGGGTGGCAGTGGCAAG+GGG - chr2_3:30248185-30248204 Msa0287410:intron 65.0%
GCAGTGGCAAGGGGTCCACT+TGG - chr2_3:30248194-30248213 Msa0287410:intron 65.0%
GGACACCGGACACGCCGACA+CGG - chr2_3:30245126-30245145 Msa0287410:CDS 70.0%
CGGGCGTCCTGGACAACCTG+AGG - chr2_3:30245358-30245377 Msa0287410:intron 70.0%
GGATGGGGGTGGCAGTGGCA+AGG - chr2_3:30248183-30248202 Msa0287410:intron 70.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 30244640 30252444 30244640 ID=Msa0287410;Name=Msa0287410
chr2_3 mRNA 30244640 30252444 30244640 ID=Msa0287410-mRNA-1;Parent=Msa0287410;Name=Msa0287410-mRNA-1;_AED=0.10;_eAED=0.10;_QI=86|1|1|1|1|1|11|364|551
chr2_3 exon 30244640 30245359 30244640 ID=Msa0287410-mRNA-1:exon:10429;Parent=Msa0287410-mRNA-1
chr2_3 exon 30245457 30245550 30245457 ID=Msa0287410-mRNA-1:exon:10428;Parent=Msa0287410-mRNA-1
chr2_3 exon 30245622 30245724 30245622 ID=Msa0287410-mRNA-1:exon:10427;Parent=Msa0287410-mRNA-1
chr2_3 exon 30245904 30245981 30245904 ID=Msa0287410-mRNA-1:exon:10426;Parent=Msa0287410-mRNA-1
chr2_3 exon 30246050 30246231 30246050 ID=Msa0287410-mRNA-1:exon:10425;Parent=Msa0287410-mRNA-1
chr2_3 exon 30246720 30246822 30246720 ID=Msa0287410-mRNA-1:exon:10424;Parent=Msa0287410-mRNA-1
chr2_3 exon 30246965 30247152 30246965 ID=Msa0287410-mRNA-1:exon:10423;Parent=Msa0287410-mRNA-1
chr2_3 exon 30248672 30248707 30248672 ID=Msa0287410-mRNA-1:exon:10422;Parent=Msa0287410-mRNA-1
chr2_3 exon 30249399 30249495 30249399 ID=Msa0287410-mRNA-1:exon:10421;Parent=Msa0287410-mRNA-1
chr2_3 exon 30249624 30249746 30249624 ID=Msa0287410-mRNA-1:exon:10420;Parent=Msa0287410-mRNA-1
chr2_3 exon 30252063 30252444 30252063 ID=Msa0287410-mRNA-1:exon:10419;Parent=Msa0287410-mRNA-1
chr2_3 five_prime_UTR 30252359 30252444 30252359 ID=Msa0287410-mRNA-1:five_prime_utr;Parent=Msa0287410-mRNA-1
chr2_3 CDS 30252063 30252358 30252063 ID=Msa0287410-mRNA-1:cds;Parent=Msa0287410-mRNA-1
chr2_3 CDS 30249624 30249746 30249624 ID=Msa0287410-mRNA-1:cds;Parent=Msa0287410-mRNA-1
chr2_3 CDS 30249399 30249495 30249399 ID=Msa0287410-mRNA-1:cds;Parent=Msa0287410-mRNA-1
chr2_3 CDS 30248672 30248707 30248672 ID=Msa0287410-mRNA-1:cds;Parent=Msa0287410-mRNA-1
chr2_3 CDS 30246965 30247152 30246965 ID=Msa0287410-mRNA-1:cds;Parent=Msa0287410-mRNA-1
chr2_3 CDS 30246720 30246822 30246720 ID=Msa0287410-mRNA-1:cds;Parent=Msa0287410-mRNA-1
chr2_3 CDS 30246050 30246231 30246050 ID=Msa0287410-mRNA-1:cds;Parent=Msa0287410-mRNA-1
chr2_3 CDS 30245904 30245981 30245904 ID=Msa0287410-mRNA-1:cds;Parent=Msa0287410-mRNA-1
chr2_3 CDS 30245622 30245724 30245622 ID=Msa0287410-mRNA-1:cds;Parent=Msa0287410-mRNA-1
chr2_3 CDS 30245457 30245550 30245457 ID=Msa0287410-mRNA-1:cds;Parent=Msa0287410-mRNA-1
chr2_3 CDS 30245004 30245359 30245004 ID=Msa0287410-mRNA-1:cds;Parent=Msa0287410-mRNA-1
chr2_3 three_prime_UTR 30244640 30245003 30244640 ID=Msa0287410-mRNA-1:three_prime_utr;Parent=Msa0287410-mRNA-1
Gene Sequence

>Msa0287410

ATGGCGAAATTGAAGATAGCAGGAACATGGTCAGGTATACTAGAAGAAGTCGATTTAGAGAATTGGACCATTTCTTCGTTACGTGAAGAAGTTGCGAAGCGATCCAATTGCGATAATCCTCACTTCATTAACCTTATTTGTGCTGGTAGAATTCTCAAGGATGATAATCAAACCCTAACCCTAACTCAATTAGGTATTAAAAATAACTCCAAGATTCTCGCTACTGTCACTTCTCCTCAACAGGGTCAGTCTCTTGTTGTTGAGGAACAAAGCTCTCATAGGCTTGCTCGTATTAGGGCAGCTGCAACTGCATTGGCTGAAAGGCATGCAGATGGTTCATTACCTCTTGAAGACTTTAACATAGAAGTTGAAGATCAAAGTGGACAGAAAGTACGCTTAGGATCAGAGATTGATCAGAGGGCAGTAATGATGGGACTGATGCTTCATGCAAAGGGGAAGCGTTTTATCCGAAAGGGAAATTACAAAGATGCACTTGAAGTGCTTACCATGGGAGAGGAGTCATTCTCTATTTGTGATCCAAAAGTCATTGAGCTTATTGACAATGTTCCAATACTGCAAATTGACATGGTATGGTGCTACTTCATGCTACGGGACATTAGATGGTTATCAGATGCTGGAAAGCGCCTTGAAATGGCTAGGGCAGGAATTGAACGTGCTCATGGGAAGGATTCTCTCCGCCTCAGACTCTTACAAGGTGGTCGCTATCCAGAGGTTGCACTGCATTTGAGACTAGAGCTGCTTGAAGGGGTGGTGGCATTTCATTCTGGCCAGTTGGAGAAATCAAGGCAAGCATTAGCCTCTGCAAAAGCGAAGTTTGTTCAGCTGCAAGTGCCAGATGAGGCCTTATCACTTGTTATGAGCATGGGCTACACTCAAAGGGATGCAAAGAGAGCACTGCGAATGAACAATCAAGATGTTGGGGATGCCATTGATTTCCTTGTTGAGGAGAAGGCAAAGAAAATGCAAAAAGATGAGGAAGATTTAAAAAGAAGAGATGAAATTAGGGAGCAAAAGCGGTATGGGGTGACCCCCTTAAAGAAGGCCGTGGATCTGGAGAGACTGAACGAATTGGTCACTATTGGGTTTGAGAAGGAGCTTGCTGCTGAAGCTCTTAGAAGAAATGAAAATGATACTCAGAAGGCATTGGATGATTTGACGAATCCAGAAACCAATTCTGATTTACAGGTTAAGATCGAGTCAAGGAAAAGGAAAAGACAACAACAAGCAAAAGATTCTGCAATTGAAAAAATTGTGCAAATGGGTTTTGAAAGATCAAGAGTGGTCGCTGCTTTTGAGGAAGGCGGCAATTTAGAAGAAGTATTGCAAAGACTGACAGCACAACCTGAGGCTGAGAATATGCAACCTCAAATGAATTCAACTGCTGCTTTTGATGGTATTGGAAGTTCATCTAACCCTTTACCAGAAAATGTTAATTCTGACATTCTAGACCAAATGAATGGGGTTGAAGATCACAATAAAACAGAAGAAAGGGATGTGGAGATGGAGGATGAGCTCTCTGCAGATATAGCTAAAGGAGATGCCTTTACTGATTATGACATTGAAGTTAATATTGAAGGGGAAGCCATAACTGAGTACCTGTCTATGGTTGAGTCTGCAGGCATTGCTTCCAAATAA

Protein sequence

>Msa0287410

MAKLKIAGTWSGILEEVDLENWTISSLREEVAKRSNCDNPHFINLICAGRILKDDNQTLTLTQLGIKNNSKILATVTSPQQGQSLVVEEQSSHRLARIRAAATALAERHADGSLPLEDFNIEVEDQSGQKVRLGSEIDQRAVMMGLMLHAKGKRFIRKGNYKDALEVLTMGEESFSICDPKVIELIDNVPILQIDMVWCYFMLRDIRWLSDAGKRLEMARAGIERAHGKDSLRLRLLQGGRYPEVALHLRLELLEGVVAFHSGQLEKSRQALASAKAKFVQLQVPDEALSLVMSMGYTQRDAKRALRMNNQDVGDAIDFLVEEKAKKMQKDEEDLKRRDEIREQKRYGVTPLKKAVDLERLNELVTIGFEKELAAEALRRNENDTQKALDDLTNPETNSDLQVKIESRKRKRQQQAKDSAIEKIVQMGFERSRVVAAFEEGGNLEEVLQRLTAQPEAENMQPQMNSTAAFDGIGSSSNPLPENVNSDILDQMNGVEDHNKTEERDVEMEDELSADIAKGDAFTDYDIEVNIEGEAITEYLSMVESAGIASK*