Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0364700 | XP_013460115.1 | 97.934 | 484 | 7 | 1 | 1 | 484 | 1 | 481 | 0.0 | 979 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0364700 | sp|F4KGE8|GIL1_ARATH | 62.677 | 493 | 166 | 8 | 1 | 484 | 76 | 559 | 0.0 | 556 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0364700 | A0A072UXH5 | 97.934 | 484 | 7 | 1 | 1 | 484 | 1 | 481 | 0.0 | 979 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0364700 | Msa0386850 | 0.808439 | 3.095953e-50 | -8.615850e-47 |
| Msa0364700 | Msa0412150 | 0.847532 | 1.089812e-59 | -8.615850e-47 |
| Msa0364700 | Msa0738040 | 0.804045 | 2.608135e-49 | -8.615850e-47 |
| Msa0364700 | Msa0945110 | 0.802550 | 5.319859e-49 | -8.615850e-47 |
| Msa0364700 | Msa1045140 | 0.815111 | 1.093108e-51 | -8.615850e-47 |
| Msa0364700 | Msa1113340 | 0.840307 | 9.408732e-58 | -8.615850e-47 |
| Msa0364700 | Msa1418090 | 0.822337 | 2.500369e-53 | -8.615850e-47 |
| Msa0259380 | Msa0364700 | 0.812811 | 3.514096e-51 | -8.615850e-47 |
| Msa0292400 | Msa0364700 | 0.805974 | 1.030073e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0364700 | MtrunA17_Chr3g0103691 | 97.934 | 484 | 7 | 1 | 1 | 484 | 1 | 481 | 0.0 | 979 |
| Msa0364700 | MtrunA17_Chr4g0011611 | 34.146 | 410 | 218 | 10 | 91 | 480 | 35 | 412 | 1.45e-72 | 235 |
| Msa0364700 | MtrunA17_Chr8g0379551 | 29.234 | 431 | 269 | 9 | 64 | 480 | 63 | 471 | 2.05e-52 | 184 |
| Msa0364700 | MtrunA17_Chr2g0315531 | 31.358 | 405 | 244 | 11 | 92 | 483 | 70 | 453 | 3.49e-50 | 178 |
| Msa0364700 | MtrunA17_Chr8g0359791 | 30.730 | 397 | 244 | 10 | 92 | 480 | 35 | 408 | 1.49e-49 | 175 |
| Msa0364700 | MtrunA17_Chr7g0230481 | 30.521 | 403 | 239 | 8 | 94 | 480 | 145 | 522 | 1.38e-45 | 166 |
| Msa0364700 | MtrunA17_Chr5g0432511 | 30.446 | 381 | 219 | 8 | 105 | 480 | 33 | 372 | 6.85e-43 | 156 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0364700 | AT5G58960.2 | 62.677 | 493 | 166 | 8 | 1 | 484 | 1 | 484 | 0.0 | 558 |
| Msa0364700 | AT5G58960.3 | 62.677 | 493 | 166 | 8 | 1 | 484 | 1 | 484 | 0.0 | 558 |
| Msa0364700 | AT5G58960.1 | 62.677 | 493 | 166 | 8 | 1 | 484 | 76 | 559 | 0.0 | 556 |
| Msa0364700 | AT2G45260.1 | 33.824 | 408 | 227 | 8 | 91 | 480 | 36 | 418 | 1.24e-73 | 239 |
| Msa0364700 | AT3G14870.4 | 30.839 | 441 | 256 | 11 | 54 | 480 | 56 | 461 | 8.12e-54 | 188 |
| Msa0364700 | AT3G14870.5 | 30.839 | 441 | 256 | 11 | 54 | 480 | 56 | 461 | 8.12e-54 | 188 |
| Msa0364700 | AT3G14870.2 | 30.839 | 441 | 256 | 11 | 54 | 480 | 56 | 461 | 8.12e-54 | 188 |
| Msa0364700 | AT3G14870.3 | 30.839 | 441 | 256 | 11 | 54 | 480 | 57 | 462 | 9.10e-54 | 187 |
| Msa0364700 | AT3G14870.1 | 30.839 | 441 | 256 | 11 | 54 | 480 | 60 | 465 | 9.90e-54 | 187 |
| Msa0364700 | AT1G29300.1 | 33.416 | 404 | 218 | 12 | 91 | 480 | 85 | 451 | 1.87e-51 | 181 |
| Msa0364700 | AT3G60680.1 | 29.787 | 423 | 247 | 9 | 76 | 480 | 103 | 493 | 1.13e-50 | 180 |
| Msa0364700 | AT1G53380.2 | 29.676 | 401 | 254 | 7 | 91 | 480 | 67 | 450 | 2.63e-50 | 178 |
| Msa0364700 | AT1G53380.4 | 29.676 | 401 | 254 | 7 | 91 | 480 | 67 | 450 | 2.63e-50 | 178 |
| Msa0364700 | AT1G53380.1 | 29.676 | 401 | 254 | 7 | 91 | 480 | 67 | 450 | 2.63e-50 | 178 |
| Msa0364700 | AT1G53380.3 | 29.676 | 401 | 254 | 7 | 91 | 480 | 67 | 450 | 2.63e-50 | 178 |
| Msa0364700 | AT1G53380.5 | 29.676 | 401 | 254 | 7 | 91 | 480 | 67 | 450 | 2.63e-50 | 178 |
| Msa0364700 | AT2G30380.1 | 32.741 | 394 | 198 | 12 | 95 | 480 | 76 | 410 | 3.38e-44 | 160 |
| Msa0364700 | AT4G34080.1 | 27.211 | 294 | 173 | 6 | 91 | 367 | 12 | 281 | 6.13e-33 | 127 |
| Msa0364700 | AT4G33320.1 | 27.000 | 300 | 177 | 7 | 91 | 372 | 12 | 287 | 5.87e-29 | 116 |
| Msa0364700 | AT5G12900.1 | 24.149 | 323 | 200 | 11 | 153 | 466 | 257 | 543 | 2.61e-11 | 66.2 |
| Msa0364700 | AT4G36100.1 | 44.068 | 59 | 33 | 0 | 91 | 149 | 12 | 70 | 6.83e-11 | 62.8 |
Find 124 sgRNAs with CRISPR-Local
Find 320 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGGATCCTGCTGAGCTTCT+TGG | 0.231526 | 3_1:-58137291 | Msa0364700:CDS |
| GTGCCAGCTGGTCAGGTTGT+AGG | 0.282373 | 3_1:-58136973 | Msa0364700:CDS |
| AACAACGACTCTTCCATCTT+TGG | 0.284369 | 3_1:+58137207 | None:intergenic |
| AGCTTAAATCCAGGACTAAC+TGG | 0.284394 | 3_1:+58136946 | None:intergenic |
| TCCTGGGGTGGTTTCCTGCT+TGG | 0.285355 | 3_1:+58137157 | None:intergenic |
| GAAGCAAATGGAAGCATTAA+TGG | 0.287144 | 3_1:-58138620 | Msa0364700:CDS |
| CGATCATGAAACTTTCTATA+TGG | 0.321609 | 3_1:-58137391 | Msa0364700:CDS |
| CTGTGTTGAGAGAGAGGTTT+CGG | 0.322230 | 3_1:-58138468 | Msa0364700:CDS |
| TTTGAAACCTTTCTCGTCAT+TGG | 0.325126 | 3_1:+58138886 | None:intergenic |
| TGGATCCTGCTGAGCTTCTT+GGG | 0.330421 | 3_1:-58137290 | Msa0364700:CDS |
| TGGGCGGGTGCCAGCTGGTC+AGG | 0.333732 | 3_1:-58136980 | Msa0364700:CDS |
| ATGAAGCAACCATACAGTTT+TGG | 0.367698 | 3_1:+58137104 | None:intergenic |
| GGTAGTGGTGAAAAGAAATC+AGG | 0.376216 | 3_1:-58138265 | Msa0364700:CDS |
| TCCGGTGGGCGGGTGCCAGC+TGG | 0.383399 | 3_1:-58136985 | Msa0364700:CDS |
| GGTGGTCGGAGAAGAGGTTT+TGG | 0.384786 | 3_1:-58138424 | Msa0364700:CDS |
| TGAGTTCCATCCACAGTATA+TGG | 0.389849 | 3_1:-58137025 | Msa0364700:CDS |
| GAAGAATGAAGTGAAGGTTA+AGG | 0.391718 | 3_1:-58138347 | Msa0364700:CDS |
| TGCTGACGTGGCGGTTGTTA+CGG | 0.393694 | 3_1:-58138506 | Msa0364700:CDS |
| AGTTGGCTGTGTTGAGAGAG+AGG | 0.405023 | 3_1:-58138474 | Msa0364700:CDS |
| GACATGAAGCGGTGACCCTT+TGG | 0.409014 | 3_1:+58138848 | None:intergenic |
| TTAGTCCTGGATTTAAGCTT+GGG | 0.409214 | 3_1:-58136942 | Msa0364700:CDS |
| TTCATTGTAAAACTCACTCC+TGG | 0.421633 | 3_1:+58137140 | None:intergenic |
| ATAGTTGTTTCAAATAGTTC+TGG | 0.422574 | 3_1:+58137630 | None:intergenic |
| AGAACTATTTGAAACAACTA+TGG | 0.426963 | 3_1:-58137628 | Msa0364700:CDS |
| TGCCAGCTGGTCAGGTTGTA+GGG | 0.430750 | 3_1:-58136972 | Msa0364700:CDS |
| AGAGAGAGGTTTCGGAGGAA+TGG | 0.437415 | 3_1:-58138460 | Msa0364700:CDS |
| CGATGAAAACGGTGACCCTT+TGG | 0.439539 | 3_1:-58138698 | Msa0364700:CDS |
| AAGATGGAAGAGTCGTTGTT+TGG | 0.442659 | 3_1:-58137204 | Msa0364700:CDS |
| ATGGATCTGTTGTAAAATCC+AGG | 0.445843 | 3_1:-58136918 | Msa0364700:CDS |
| GTTGTTGCTCTTTCTAGTAA+TGG | 0.451944 | 3_1:-58138286 | Msa0364700:CDS |
| GTAGGGTTTCCAGTTAGTCC+TGG | 0.454644 | 3_1:-58136955 | Msa0364700:CDS |
| TCTAATGCACAATGCACATT+GGG | 0.456485 | 3_1:-58137559 | Msa0364700:CDS |
| CAATCACGGCGAAACTGATC+AGG | 0.457004 | 3_1:+58137342 | None:intergenic |
| TAGGGTTGGCCAAAACTGTA+TGG | 0.457586 | 3_1:-58137113 | Msa0364700:CDS |
| AAGAGGAAACTAGGAATTCA+AGG | 0.457961 | 3_1:-58138229 | Msa0364700:intron |
| GTTAGTCCTGGATTTAAGCT+TGG | 0.463063 | 3_1:-58136943 | Msa0364700:CDS |
| GCCTCAAATTGACTTGGTGG+AGG | 0.466137 | 3_1:+58137060 | None:intergenic |
| CCTCAAATTGACTTGGTGGA+GGG | 0.471972 | 3_1:+58137061 | None:intergenic |
| TGCCATTGTTCATCCAAAGA+TGG | 0.479244 | 3_1:-58137220 | Msa0364700:CDS |
| GGTTAAGGATTTAGAAGTGA+AGG | 0.480570 | 3_1:-58138332 | Msa0364700:CDS |
| ATATCGAGGAAAATCTTTCA+AGG | 0.484464 | 3_1:-58137417 | Msa0364700:CDS |
| CGACTTGCCTCAAATTGACT+TGG | 0.486173 | 3_1:+58137054 | None:intergenic |
| AACCCTACAACCTGACCAGC+TGG | 0.487016 | 3_1:+58136970 | None:intergenic |
| AGGAATGGTGGTGGTAGGAA+AGG | 0.489638 | 3_1:-58138445 | Msa0364700:CDS |
| GATTTGAAAGAGAAGCTTGA+AGG | 0.493676 | 3_1:-58138310 | Msa0364700:CDS |
| CCTGGATTTAAGCTTGGGAA+TGG | 0.494040 | 3_1:-58136937 | Msa0364700:CDS |
| CCCTCCACCAAGTCAATTTG+AGG | 0.496125 | 3_1:-58137061 | Msa0364700:CDS |
| TCTCAATCTAAGAGGAAACT+AGG | 0.498356 | 3_1:-58138238 | Msa0364700:CDS |
| TCCAAGCAGGAAACCACCCC+AGG | 0.499560 | 3_1:-58137158 | Msa0364700:CDS |
| ACCAGCTGGCACCCGCCCAC+CGG | 0.500037 | 3_1:+58136984 | None:intergenic |
| CACTATCCATATACTGTGGA+TGG | 0.500777 | 3_1:+58137019 | None:intergenic |
| GAGAGGTTTCGGAGGAATGG+TGG | 0.511830 | 3_1:-58138457 | Msa0364700:CDS |
| AGGAAAGGTGGTCGGAGAAG+AGG | 0.512189 | 3_1:-58138430 | Msa0364700:CDS |
| ATTTAACGAAGACAAAATGA+TGG | 0.514191 | 3_1:-58138662 | Msa0364700:CDS |
| TCTTCAATTATCTTCCTCAC+TGG | 0.514432 | 3_1:+58138808 | None:intergenic |
| AAAATCCCAAGAAGCTCAGC+AGG | 0.514756 | 3_1:+58137285 | None:intergenic |
| ATCTTCCTCACTGGAACAAG+TGG | 0.515781 | 3_1:+58138817 | None:intergenic |
| CTCTAATGCACAATGCACAT+TGG | 0.523721 | 3_1:-58137560 | Msa0364700:CDS |
| GACGAAGATGACGATGAAAA+CGG | 0.527107 | 3_1:-58138709 | Msa0364700:CDS |
| GCCGTATGAAGCAGTGGTGG+AGG | 0.527747 | 3_1:-58138374 | Msa0364700:CDS |
| AATGGTGGTGGTAGGAAAGG+TGG | 0.530582 | 3_1:-58138442 | Msa0364700:CDS |
| AAGAAGCTCAGCAGGATCCA+TGG | 0.530759 | 3_1:+58137293 | None:intergenic |
| GTTTCAAATAGTTCTGGTGT+AGG | 0.534867 | 3_1:+58137636 | None:intergenic |
| CAGGGAGGTCTCAATCTAAG+AGG | 0.536390 | 3_1:-58138246 | Msa0364700:CDS |
| CTTGCCTCAAATTGACTTGG+TGG | 0.539358 | 3_1:+58137057 | None:intergenic |
| TCACTGGAACAAGTGGGTTG+AGG | 0.540794 | 3_1:+58138824 | None:intergenic |
| GGCGTCGGTGAGGGAGGTTG+TGG | 0.540946 | 3_1:-58138398 | Msa0364700:CDS |
| AATGGAAGAAATCTTCGAAA+CGG | 0.543142 | 3_1:-58138602 | Msa0364700:CDS |
| AACTCAACCAATGACGAGAA+AGG | 0.543640 | 3_1:-58138893 | None:intergenic |
| CATGAAACTTTCTATATGGA+TGG | 0.544853 | 3_1:-58137387 | Msa0364700:CDS |
| TGTTACGGAGCTGAGGAAGT+TGG | 0.547810 | 3_1:-58138491 | Msa0364700:CDS |
| TCATTGTAAAACTCACTCCT+GGG | 0.554453 | 3_1:+58137141 | None:intergenic |
| GAAGATGAGGGTTGCTGACG+TGG | 0.554854 | 3_1:-58138518 | Msa0364700:CDS |
| ATACAAGGATATGAAGTCCA+TGG | 0.554965 | 3_1:-58137310 | Msa0364700:CDS |
| GCTCTTTCTAGTAATGGTAG+TGG | 0.557484 | 3_1:-58138280 | Msa0364700:CDS |
| GGAGTTGAAGAATGAAGTGA+AGG | 0.558888 | 3_1:-58138353 | Msa0364700:CDS |
| TGGTGTGGCGTCGGTGAGGG+AGG | 0.559820 | 3_1:-58138404 | Msa0364700:CDS |
| CTCATCTTCTCTGCATCCCA+CGG | 0.564141 | 3_1:+58138532 | None:intergenic |
| CAGGATTGAGGAGGGATGAG+AGG | 0.565482 | 3_1:+58137361 | None:intergenic |
| CCATTCCCAAGCTTAAATCC+AGG | 0.570658 | 3_1:+58136937 | None:intergenic |
| TCCTCCACCACTGCTTCATA+CGG | 0.572088 | 3_1:+58138373 | None:intergenic |
| AGATAAAAGCATAGATGTGA+AGG | 0.572469 | 3_1:+58137581 | None:intergenic |
| TGAAAACGGTGACCCTTTGG+AGG | 0.572559 | 3_1:-58138695 | Msa0364700:CDS |
| TATCGAGGAAAATCTTTCAA+GGG | 0.572592 | 3_1:-58137416 | Msa0364700:CDS |
| ATTTCTCCGATCTGATCCAA+AGG | 0.573461 | 3_1:-58138864 | Msa0364700:CDS |
| TTCGGAGGAATGGTGGTGGT+AGG | 0.576057 | 3_1:-58138450 | Msa0364700:CDS |
| CGTGGGATGCAGAGAAGATG+AGG | 0.576720 | 3_1:-58138531 | Msa0364700:CDS |
| AGGTTTCGGAGGAATGGTGG+TGG | 0.578118 | 3_1:-58138454 | Msa0364700:CDS |
| TGTATTGAGTGAAGCAATCA+CGG | 0.580907 | 3_1:+58137328 | None:intergenic |
| GGCGAAACTGATCAGGATTG+AGG | 0.583759 | 3_1:+58137349 | None:intergenic |
| TTCCATCTTTGGATGAACAA+TGG | 0.584376 | 3_1:+58137218 | None:intergenic |
| AATCAAGTGCATACTTAGCA+TGG | 0.590253 | 3_1:+58137445 | None:intergenic |
| CAGCACGGTCAAGTCCAAGC+AGG | 0.591086 | 3_1:-58137171 | Msa0364700:CDS |
| TTTCTCCGATCTGATCCAAA+GGG | 0.592192 | 3_1:-58138863 | Msa0364700:CDS |
| TTTAACGAAGACAAAATGAT+GGG | 0.592457 | 3_1:-58138661 | Msa0364700:CDS |
| GTAGTGGTGAAAAGAAATCA+GGG | 0.598414 | 3_1:-58138264 | Msa0364700:CDS |
| AGTCAATTTGAGGCAAGTCG+TGG | 0.609506 | 3_1:-58137051 | Msa0364700:CDS |
| TCTGGCTATCAAATATACCC+TGG | 0.612671 | 3_1:+58136900 | None:intergenic |
| TGTAAAACTCACTCCTGGGG+TGG | 0.613108 | 3_1:+58137145 | None:intergenic |
| TGATTGCTTCACTCAATACA+AGG | 0.613182 | 3_1:-58137325 | Msa0364700:CDS |
| GTGGTGGTAGGAAAGGTGGT+CGG | 0.614967 | 3_1:-58138438 | Msa0364700:CDS |
| CACTTGATTCCTATATATCG+AGG | 0.615079 | 3_1:-58137431 | Msa0364700:CDS |
| TGGATCTGTTGTAAAATCCA+GGG | 0.622939 | 3_1:-58136917 | Msa0364700:CDS |
| TCCACAGTATATGGATAGTG+TGG | 0.626365 | 3_1:-58137016 | Msa0364700:CDS |
| AAACTGATCAGGATTGAGGA+GGG | 0.627461 | 3_1:+58137353 | None:intergenic |
| GAAACTGATCAGGATTGAGG+AGG | 0.628809 | 3_1:+58137352 | None:intergenic |
| TGGCGGTTGTTACGGAGCTG+AGG | 0.633993 | 3_1:-58138498 | Msa0364700:CDS |
| TTTGGTAACTTAGAGCAGCA+CGG | 0.643785 | 3_1:-58137186 | Msa0364700:CDS |
| TGTGGCGCCGTATGAAGCAG+TGG | 0.652115 | 3_1:-58138380 | Msa0364700:CDS |
| GGTGACCCTTTGGATCAGAT+CGG | 0.655253 | 3_1:+58138858 | None:intergenic |
| TCTTCCTCACTGGAACAAGT+GGG | 0.657805 | 3_1:+58138818 | None:intergenic |
| GGCGCCGTATGAAGCAGTGG+TGG | 0.660336 | 3_1:-58138377 | Msa0364700:CDS |
| ACAAGAAGCGCATTCACCGT+GGG | 0.661788 | 3_1:-58138548 | Msa0364700:CDS |
| TACAAGAAGCGCATTCACCG+TGG | 0.661802 | 3_1:-58138549 | Msa0364700:CDS |
| TGTTGAGAGAGAGGTTTCGG+AGG | 0.661905 | 3_1:-58138465 | Msa0364700:CDS |
| TCTTTGGATGAACAATGGCA+AGG | 0.673047 | 3_1:+58137223 | None:intergenic |
| GTGGGATGCAGAGAAGATGA+GGG | 0.673755 | 3_1:-58138530 | Msa0364700:CDS |
| ACCACACTATCCATATACTG+TGG | 0.681895 | 3_1:+58137015 | None:intergenic |
| CATTGTAAAACTCACTCCTG+GGG | 0.682589 | 3_1:+58137142 | None:intergenic |
| TGGGTTGAGGAGACATGAAG+CGG | 0.686959 | 3_1:+58138837 | None:intergenic |
| TCAACCCACTTGTTCCAGTG+AGG | 0.695744 | 3_1:-58138822 | Msa0364700:CDS |
| GATGAGGGTTGCTGACGTGG+CGG | 0.712629 | 3_1:-58138515 | Msa0364700:CDS |
| AGCATGGTGAGATGAGACAA+TGG | 0.732639 | 3_1:+58137461 | None:intergenic |
| GTGGTGAAAAGAAATCAGGG+AGG | 0.827644 | 3_1:-58138261 | Msa0364700:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACATTAAAAAACAAAAACAA+AGG | + | chr3_1:58137589-58137608 | None:intergenic | 15.0% |
| !!! | TTTTGGAATATAATTCTAAA+GGG | - | chr3_1:58137801-58137820 | Msa0364700:intron | 15.0% |
| !!! | TTTTGGAATATAACTTAAAA+GGG | - | chr3_1:58137987-58138006 | Msa0364700:intron | 15.0% |
| !!! | AGTTTTACAATGAATTTTTA+GGG | - | chr3_1:58138646-58138665 | Msa0364700:CDS | 15.0% |
| !! | ACATTAAAAAACAAAAACAA+AGG | + | chr3_1:58137589-58137608 | None:intergenic | 15.0% |
| !!! | TTTTGGAATATAATTCTAAA+GGG | - | chr3_1:58137801-58137820 | Msa0364700:intron | 15.0% |
| !!! | TTTTGGAATATAACTTAAAA+GGG | - | chr3_1:58137987-58138006 | Msa0364700:intron | 15.0% |
| !!! | AGTTTTACAATGAATTTTTA+GGG | - | chr3_1:58138646-58138665 | Msa0364700:CDS | 15.0% |
| !!! | CTTTTGGAATATAATTCTAA+AGG | - | chr3_1:58137800-58137819 | Msa0364700:intron | 20.0% |
| !! | TAATCCAAAAGTTACTTATT+TGG | - | chr3_1:58137844-58137863 | Msa0364700:intron | 20.0% |
| !!! | AATTCCAAATAAGTAACTTT+TGG | + | chr3_1:58137851-58137870 | None:intergenic | 20.0% |
| !!! | AAAGTTACTTATTTGGAATT+TGG | - | chr3_1:58137851-58137870 | Msa0364700:intron | 20.0% |
| !!! | CTTTTGGAATATAACTTAAA+AGG | - | chr3_1:58137986-58138005 | Msa0364700:intron | 20.0% |
| !!! | TTTGGAATATAACTTAAAAG+GGG | - | chr3_1:58137988-58138007 | Msa0364700:intron | 20.0% |
| !!! | GAGTTTTACAATGAATTTTT+AGG | - | chr3_1:58138645-58138664 | Msa0364700:CDS | 20.0% |
| !!! | CTTTTGGAATATAATTCTAA+AGG | - | chr3_1:58137800-58137819 | Msa0364700:intron | 20.0% |
| !! | TAATCCAAAAGTTACTTATT+TGG | - | chr3_1:58137844-58137863 | Msa0364700:intron | 20.0% |
| !!! | AATTCCAAATAAGTAACTTT+TGG | + | chr3_1:58137851-58137870 | None:intergenic | 20.0% |
| !!! | AAAGTTACTTATTTGGAATT+TGG | - | chr3_1:58137851-58137870 | Msa0364700:intron | 20.0% |
| !!! | CTTTTGGAATATAACTTAAA+AGG | - | chr3_1:58137986-58138005 | Msa0364700:intron | 20.0% |
| !!! | TTTGGAATATAACTTAAAAG+GGG | - | chr3_1:58137988-58138007 | Msa0364700:intron | 20.0% |
| !!! | GAGTTTTACAATGAATTTTT+AGG | - | chr3_1:58138645-58138664 | Msa0364700:CDS | 20.0% |
| ! | ATTTAACGAAGACAAAATGA+TGG | - | chr3_1:58137115-58137134 | Msa0364700:CDS | 25.0% |
| ! | TTTAACGAAGACAAAATGAT+GGG | - | chr3_1:58137116-58137135 | Msa0364700:CDS | 25.0% |
| !! | TGTGTTTCATGTTTAGAATT+TGG | - | chr3_1:58137629-58137648 | Msa0364700:CDS | 25.0% |
| !!! | TGCTTATTTGATTTTGCTTT+TGG | - | chr3_1:58137784-58137803 | Msa0364700:intron | 25.0% |
| !! | TCACAAAGTTTCTTTTTGTT+TGG | - | chr3_1:58137695-58137714 | Msa0364700:intron | 25.0% |
| ! | CTTCAAGAAACTATTAACTT+TGG | + | chr3_1:58138039-58138058 | None:intergenic | 25.0% |
| !! | ATAGTTGTTTCAAATAGTTC+TGG | + | chr3_1:58138150-58138169 | None:intergenic | 25.0% |
| !! | AGAACTATTTGAAACAACTA+TGG | - | chr3_1:58138149-58138168 | Msa0364700:intron | 25.0% |
| !! | AAAGATTTTCCTCGATATAT+AGG | + | chr3_1:58138358-58138377 | None:intergenic | 25.0% |
| !!! | TTACAATGAATTTTTAGGGT+TGG | - | chr3_1:58138650-58138669 | Msa0364700:CDS | 25.0% |
| ! | ATTTAACGAAGACAAAATGA+TGG | - | chr3_1:58137115-58137134 | Msa0364700:CDS | 25.0% |
| ! | TTTAACGAAGACAAAATGAT+GGG | - | chr3_1:58137116-58137135 | Msa0364700:CDS | 25.0% |
| !! | TGTGTTTCATGTTTAGAATT+TGG | - | chr3_1:58137629-58137648 | Msa0364700:CDS | 25.0% |
| !!! | TGCTTATTTGATTTTGCTTT+TGG | - | chr3_1:58137784-58137803 | Msa0364700:intron | 25.0% |
| !! | TCACAAAGTTTCTTTTTGTT+TGG | - | chr3_1:58137695-58137714 | Msa0364700:intron | 25.0% |
| ! | CTTCAAGAAACTATTAACTT+TGG | + | chr3_1:58138039-58138058 | None:intergenic | 25.0% |
| !! | ATAGTTGTTTCAAATAGTTC+TGG | + | chr3_1:58138150-58138169 | None:intergenic | 25.0% |
| !! | AGAACTATTTGAAACAACTA+TGG | - | chr3_1:58138149-58138168 | Msa0364700:intron | 25.0% |
| !! | AAAGATTTTCCTCGATATAT+AGG | + | chr3_1:58138358-58138377 | None:intergenic | 25.0% |
| !!! | TTACAATGAATTTTTAGGGT+TGG | - | chr3_1:58138650-58138669 | Msa0364700:CDS | 25.0% |
| AATGGAAGAAATCTTCGAAA+CGG | - | chr3_1:58137175-58137194 | Msa0364700:CDS | 30.0% | |
| !!! | TTCAGAGTGATTTTAGCTTT+TGG | - | chr3_1:58137970-58137989 | Msa0364700:intron | 30.0% |
| CTTGAAGATGAAATGAATTG+AGG | - | chr3_1:58138052-58138071 | Msa0364700:intron | 30.0% | |
| ! | AGATAAAAGCATAGATGTGA+AGG | + | chr3_1:58138199-58138218 | None:intergenic | 30.0% |
| ATATCGAGGAAAATCTTTCA+AGG | - | chr3_1:58138360-58138379 | Msa0364700:CDS | 30.0% | |
| TATCGAGGAAAATCTTTCAA+GGG | - | chr3_1:58138361-58138380 | Msa0364700:CDS | 30.0% | |
| CGATCATGAAACTTTCTATA+TGG | - | chr3_1:58138386-58138405 | Msa0364700:CDS | 30.0% | |
| CATGAAACTTTCTATATGGA+TGG | - | chr3_1:58138390-58138409 | Msa0364700:CDS | 30.0% | |
| !! | ATTTTACCAACATGTCACTT+TGG | - | chr3_1:58138510-58138529 | Msa0364700:CDS | 30.0% |
| ! | AATTTTCCAAAGTGACATGT+TGG | + | chr3_1:58138519-58138538 | None:intergenic | 30.0% |
| AATGGAAGAAATCTTCGAAA+CGG | - | chr3_1:58137175-58137194 | Msa0364700:CDS | 30.0% | |
| !!! | TTCAGAGTGATTTTAGCTTT+TGG | - | chr3_1:58137970-58137989 | Msa0364700:intron | 30.0% |
| CTTGAAGATGAAATGAATTG+AGG | - | chr3_1:58138052-58138071 | Msa0364700:intron | 30.0% | |
| ! | AGATAAAAGCATAGATGTGA+AGG | + | chr3_1:58138199-58138218 | None:intergenic | 30.0% |
| ATATCGAGGAAAATCTTTCA+AGG | - | chr3_1:58138360-58138379 | Msa0364700:CDS | 30.0% | |
| TATCGAGGAAAATCTTTCAA+GGG | - | chr3_1:58138361-58138380 | Msa0364700:CDS | 30.0% | |
| CGATCATGAAACTTTCTATA+TGG | - | chr3_1:58138386-58138405 | Msa0364700:CDS | 30.0% | |
| CATGAAACTTTCTATATGGA+TGG | - | chr3_1:58138390-58138409 | Msa0364700:CDS | 30.0% | |
| !! | ATTTTACCAACATGTCACTT+TGG | - | chr3_1:58138510-58138529 | Msa0364700:CDS | 30.0% |
| ! | AATTTTCCAAAGTGACATGT+TGG | + | chr3_1:58138519-58138538 | None:intergenic | 30.0% |
| TCTTCAATTATCTTCCTCAC+TGG | + | chr3_1:58136972-58136991 | None:intergenic | 35.0% | |
| !! | CTGTTTTCTTCTGATTCGTA+GGG | + | chr3_1:58137002-58137021 | None:intergenic | 35.0% |
| !! | TCTGTTTTCTTCTGATTCGT+AGG | + | chr3_1:58137003-58137022 | None:intergenic | 35.0% |
| !! | ATTCGTCATTTTCCTCCAAA+GGG | + | chr3_1:58137097-58137116 | None:intergenic | 35.0% |
| !! | AATTCGTCATTTTCCTCCAA+AGG | + | chr3_1:58137098-58137117 | None:intergenic | 35.0% |
| ! | GATGGGTATGAAGATTTTGA+AGG | - | chr3_1:58137133-58137152 | Msa0364700:CDS | 35.0% |
| !! | GATTTTGAAGGTGAAGCAAA+TGG | - | chr3_1:58137145-58137164 | Msa0364700:CDS | 35.0% |
| !! | GAAGCAAATGGAAGCATTAA+TGG | - | chr3_1:58137157-58137176 | Msa0364700:CDS | 35.0% |
| GAAGAATGAAGTGAAGGTTA+AGG | - | chr3_1:58137430-58137449 | Msa0364700:CDS | 35.0% | |
| GGTTAAGGATTTAGAAGTGA+AGG | - | chr3_1:58137445-58137464 | Msa0364700:CDS | 35.0% | |
| GATTTGAAAGAGAAGCTTGA+AGG | - | chr3_1:58137467-58137486 | Msa0364700:CDS | 35.0% | |
| ! | GTTGTTGCTCTTTCTAGTAA+TGG | - | chr3_1:58137491-58137510 | Msa0364700:CDS | 35.0% |
| GTAGTGGTGAAAAGAAATCA+GGG | - | chr3_1:58137513-58137532 | Msa0364700:CDS | 35.0% | |
| TCTCAATCTAAGAGGAAACT+AGG | - | chr3_1:58137539-58137558 | Msa0364700:CDS | 35.0% | |
| AAGAGGAAACTAGGAATTCA+AGG | - | chr3_1:58137548-58137567 | Msa0364700:CDS | 35.0% | |
| TAACTTAAAAGGGGTTTCAG+AGG | - | chr3_1:58137997-58138016 | Msa0364700:intron | 35.0% | |
| !! | GTTTCAAATAGTTCTGGTGT+AGG | + | chr3_1:58138144-58138163 | None:intergenic | 35.0% |
| TCTAATGCACAATGCACATT+GGG | - | chr3_1:58138218-58138237 | Msa0364700:intron | 35.0% | |
| AATCAAGTGCATACTTAGCA+TGG | + | chr3_1:58138335-58138354 | None:intergenic | 35.0% | |
| CACTTGATTCCTATATATCG+AGG | - | chr3_1:58138346-58138365 | Msa0364700:CDS | 35.0% | |
| TGTATTGAGTGAAGCAATCA+CGG | + | chr3_1:58138452-58138471 | None:intergenic | 35.0% | |
| TGATTGCTTCACTCAATACA+AGG | - | chr3_1:58138452-58138471 | Msa0364700:CDS | 35.0% | |
| ATACAAGGATATGAAGTCCA+TGG | - | chr3_1:58138467-58138486 | Msa0364700:CDS | 35.0% | |
| TTCCATCTTTGGATGAACAA+TGG | + | chr3_1:58138562-58138581 | None:intergenic | 35.0% | |
| TCATTGTAAAACTCACTCCT+GGG | + | chr3_1:58138639-58138658 | None:intergenic | 35.0% | |
| TTCATTGTAAAACTCACTCC+TGG | + | chr3_1:58138640-58138659 | None:intergenic | 35.0% | |
| ! | ATGAAGCAACCATACAGTTT+TGG | + | chr3_1:58138676-58138695 | None:intergenic | 35.0% |
| ! | GATAGTGTGGTGAAATTTTC+CGG | - | chr3_1:58138774-58138793 | Msa0364700:CDS | 35.0% |
| TTAGTCCTGGATTTAAGCTT+GGG | - | chr3_1:58138835-58138854 | Msa0364700:CDS | 35.0% | |
| ATGGATCTGTTGTAAAATCC+AGG | - | chr3_1:58138859-58138878 | Msa0364700:CDS | 35.0% | |
| TGGATCTGTTGTAAAATCCA+GGG | - | chr3_1:58138860-58138879 | Msa0364700:CDS | 35.0% | |
| TCTTCAATTATCTTCCTCAC+TGG | + | chr3_1:58136972-58136991 | None:intergenic | 35.0% | |
| !! | CTGTTTTCTTCTGATTCGTA+GGG | + | chr3_1:58137002-58137021 | None:intergenic | 35.0% |
| !! | TCTGTTTTCTTCTGATTCGT+AGG | + | chr3_1:58137003-58137022 | None:intergenic | 35.0% |
| !! | ATTCGTCATTTTCCTCCAAA+GGG | + | chr3_1:58137097-58137116 | None:intergenic | 35.0% |
| !! | AATTCGTCATTTTCCTCCAA+AGG | + | chr3_1:58137098-58137117 | None:intergenic | 35.0% |
| ! | GATGGGTATGAAGATTTTGA+AGG | - | chr3_1:58137133-58137152 | Msa0364700:CDS | 35.0% |
| !! | GATTTTGAAGGTGAAGCAAA+TGG | - | chr3_1:58137145-58137164 | Msa0364700:CDS | 35.0% |
| !! | GAAGCAAATGGAAGCATTAA+TGG | - | chr3_1:58137157-58137176 | Msa0364700:CDS | 35.0% |
| GAAGAATGAAGTGAAGGTTA+AGG | - | chr3_1:58137430-58137449 | Msa0364700:CDS | 35.0% | |
| GGTTAAGGATTTAGAAGTGA+AGG | - | chr3_1:58137445-58137464 | Msa0364700:CDS | 35.0% | |
| GATTTGAAAGAGAAGCTTGA+AGG | - | chr3_1:58137467-58137486 | Msa0364700:CDS | 35.0% | |
| ! | GTTGTTGCTCTTTCTAGTAA+TGG | - | chr3_1:58137491-58137510 | Msa0364700:CDS | 35.0% |
| GTAGTGGTGAAAAGAAATCA+GGG | - | chr3_1:58137513-58137532 | Msa0364700:CDS | 35.0% | |
| TCTCAATCTAAGAGGAAACT+AGG | - | chr3_1:58137539-58137558 | Msa0364700:CDS | 35.0% | |
| AAGAGGAAACTAGGAATTCA+AGG | - | chr3_1:58137548-58137567 | Msa0364700:CDS | 35.0% | |
| TAACTTAAAAGGGGTTTCAG+AGG | - | chr3_1:58137997-58138016 | Msa0364700:intron | 35.0% | |
| !! | GTTTCAAATAGTTCTGGTGT+AGG | + | chr3_1:58138144-58138163 | None:intergenic | 35.0% |
| TCTAATGCACAATGCACATT+GGG | - | chr3_1:58138218-58138237 | Msa0364700:intron | 35.0% | |
| AATCAAGTGCATACTTAGCA+TGG | + | chr3_1:58138335-58138354 | None:intergenic | 35.0% | |
| CACTTGATTCCTATATATCG+AGG | - | chr3_1:58138346-58138365 | Msa0364700:CDS | 35.0% | |
| TGTATTGAGTGAAGCAATCA+CGG | + | chr3_1:58138452-58138471 | None:intergenic | 35.0% | |
| TGATTGCTTCACTCAATACA+AGG | - | chr3_1:58138452-58138471 | Msa0364700:CDS | 35.0% | |
| ATACAAGGATATGAAGTCCA+TGG | - | chr3_1:58138467-58138486 | Msa0364700:CDS | 35.0% | |
| TTCCATCTTTGGATGAACAA+TGG | + | chr3_1:58138562-58138581 | None:intergenic | 35.0% | |
| TCATTGTAAAACTCACTCCT+GGG | + | chr3_1:58138639-58138658 | None:intergenic | 35.0% | |
| TTCATTGTAAAACTCACTCC+TGG | + | chr3_1:58138640-58138659 | None:intergenic | 35.0% | |
| ! | ATGAAGCAACCATACAGTTT+TGG | + | chr3_1:58138676-58138695 | None:intergenic | 35.0% |
| ! | GATAGTGTGGTGAAATTTTC+CGG | - | chr3_1:58138774-58138793 | Msa0364700:CDS | 35.0% |
| TTAGTCCTGGATTTAAGCTT+GGG | - | chr3_1:58138835-58138854 | Msa0364700:CDS | 35.0% | |
| ATGGATCTGTTGTAAAATCC+AGG | - | chr3_1:58138859-58138878 | Msa0364700:CDS | 35.0% | |
| TGGATCTGTTGTAAAATCCA+GGG | - | chr3_1:58138860-58138879 | Msa0364700:CDS | 35.0% | |
| ATTTCTCCGATCTGATCCAA+AGG | - | chr3_1:58136913-58136932 | Msa0364700:CDS | 40.0% | |
| TTTCTCCGATCTGATCCAAA+GGG | - | chr3_1:58136914-58136933 | Msa0364700:CDS | 40.0% | |
| GACGAAGATGACGATGAAAA+CGG | - | chr3_1:58137068-58137087 | Msa0364700:CDS | 40.0% | |
| GGAGTTGAAGAATGAAGTGA+AGG | - | chr3_1:58137424-58137443 | Msa0364700:CDS | 40.0% | |
| ! | GCTCTTTCTAGTAATGGTAG+TGG | - | chr3_1:58137497-58137516 | Msa0364700:CDS | 40.0% |
| ! | GGTAGTGGTGAAAAGAAATC+AGG | - | chr3_1:58137512-58137531 | Msa0364700:CDS | 40.0% |
| GGGTTTCAGATTCTACTTGA+AGG | - | chr3_1:58137821-58137840 | Msa0364700:intron | 40.0% | |
| CTCTAATGCACAATGCACAT+TGG | - | chr3_1:58138217-58138236 | Msa0364700:intron | 40.0% | |
| AAACTGATCAGGATTGAGGA+GGG | + | chr3_1:58138427-58138446 | None:intergenic | 40.0% | |
| TCTTTGGATGAACAATGGCA+AGG | + | chr3_1:58138557-58138576 | None:intergenic | 40.0% | |
| TGCCATTGTTCATCCAAAGA+TGG | - | chr3_1:58138557-58138576 | Msa0364700:CDS | 40.0% | |
| AACAACGACTCTTCCATCTT+TGG | + | chr3_1:58138573-58138592 | None:intergenic | 40.0% | |
| AAGATGGAAGAGTCGTTGTT+TGG | - | chr3_1:58138573-58138592 | Msa0364700:CDS | 40.0% | |
| ! | TTTGGTAACTTAGAGCAGCA+CGG | - | chr3_1:58138591-58138610 | Msa0364700:CDS | 40.0% |
| CATTGTAAAACTCACTCCTG+GGG | + | chr3_1:58138638-58138657 | None:intergenic | 40.0% | |
| TGAGTTCCATCCACAGTATA+TGG | - | chr3_1:58138752-58138771 | Msa0364700:CDS | 40.0% | |
| CACTATCCATATACTGTGGA+TGG | + | chr3_1:58138761-58138780 | None:intergenic | 40.0% | |
| TCCACAGTATATGGATAGTG+TGG | - | chr3_1:58138761-58138780 | Msa0364700:CDS | 40.0% | |
| ACCACACTATCCATATACTG+TGG | + | chr3_1:58138765-58138784 | None:intergenic | 40.0% | |
| AGCTTAAATCCAGGACTAAC+TGG | + | chr3_1:58138834-58138853 | None:intergenic | 40.0% | |
| GTTAGTCCTGGATTTAAGCT+TGG | - | chr3_1:58138834-58138853 | Msa0364700:CDS | 40.0% | |
| TCTGGCTATCAAATATACCC+TGG | + | chr3_1:58138880-58138899 | None:intergenic | 40.0% | |
| ATTTCTCCGATCTGATCCAA+AGG | - | chr3_1:58136913-58136932 | Msa0364700:CDS | 40.0% | |
| TTTCTCCGATCTGATCCAAA+GGG | - | chr3_1:58136914-58136933 | Msa0364700:CDS | 40.0% | |
| GACGAAGATGACGATGAAAA+CGG | - | chr3_1:58137068-58137087 | Msa0364700:CDS | 40.0% | |
| GGAGTTGAAGAATGAAGTGA+AGG | - | chr3_1:58137424-58137443 | Msa0364700:CDS | 40.0% | |
| ! | GCTCTTTCTAGTAATGGTAG+TGG | - | chr3_1:58137497-58137516 | Msa0364700:CDS | 40.0% |
| ! | GGTAGTGGTGAAAAGAAATC+AGG | - | chr3_1:58137512-58137531 | Msa0364700:CDS | 40.0% |
| GGGTTTCAGATTCTACTTGA+AGG | - | chr3_1:58137821-58137840 | Msa0364700:intron | 40.0% | |
| CTCTAATGCACAATGCACAT+TGG | - | chr3_1:58138217-58138236 | Msa0364700:intron | 40.0% | |
| AAACTGATCAGGATTGAGGA+GGG | + | chr3_1:58138427-58138446 | None:intergenic | 40.0% | |
| TCTTTGGATGAACAATGGCA+AGG | + | chr3_1:58138557-58138576 | None:intergenic | 40.0% | |
| TGCCATTGTTCATCCAAAGA+TGG | - | chr3_1:58138557-58138576 | Msa0364700:CDS | 40.0% | |
| AACAACGACTCTTCCATCTT+TGG | + | chr3_1:58138573-58138592 | None:intergenic | 40.0% | |
| AAGATGGAAGAGTCGTTGTT+TGG | - | chr3_1:58138573-58138592 | Msa0364700:CDS | 40.0% | |
| ! | TTTGGTAACTTAGAGCAGCA+CGG | - | chr3_1:58138591-58138610 | Msa0364700:CDS | 40.0% |
| CATTGTAAAACTCACTCCTG+GGG | + | chr3_1:58138638-58138657 | None:intergenic | 40.0% | |
| TGAGTTCCATCCACAGTATA+TGG | - | chr3_1:58138752-58138771 | Msa0364700:CDS | 40.0% | |
| CACTATCCATATACTGTGGA+TGG | + | chr3_1:58138761-58138780 | None:intergenic | 40.0% | |
| TCCACAGTATATGGATAGTG+TGG | - | chr3_1:58138761-58138780 | Msa0364700:CDS | 40.0% | |
| ACCACACTATCCATATACTG+TGG | + | chr3_1:58138765-58138784 | None:intergenic | 40.0% | |
| AGCTTAAATCCAGGACTAAC+TGG | + | chr3_1:58138834-58138853 | None:intergenic | 40.0% | |
| GTTAGTCCTGGATTTAAGCT+TGG | - | chr3_1:58138834-58138853 | Msa0364700:CDS | 40.0% | |
| TCTGGCTATCAAATATACCC+TGG | + | chr3_1:58138880-58138899 | None:intergenic | 40.0% | |
| TCTTCCTCACTGGAACAAGT+GGG | + | chr3_1:58136962-58136981 | None:intergenic | 45.0% | |
| ATCTTCCTCACTGGAACAAG+TGG | + | chr3_1:58136963-58136982 | None:intergenic | 45.0% | |
| CTGTGTTGAGAGAGAGGTTT+CGG | - | chr3_1:58137309-58137328 | Msa0364700:CDS | 45.0% | |
| GTGGTGAAAAGAAATCAGGG+AGG | - | chr3_1:58137516-58137535 | Msa0364700:CDS | 45.0% | |
| AGCATGGTGAGATGAGACAA+TGG | + | chr3_1:58138319-58138338 | None:intergenic | 45.0% | |
| GAAACTGATCAGGATTGAGG+AGG | + | chr3_1:58138428-58138447 | None:intergenic | 45.0% | |
| AAAATCCCAAGAAGCTCAGC+AGG | + | chr3_1:58138495-58138514 | None:intergenic | 45.0% | |
| !! | TAGGGTTGGCCAAAACTGTA+TGG | - | chr3_1:58138664-58138683 | Msa0364700:CDS | 45.0% |
| !! | CCTCAAATTGACTTGGTGGA+GGG | + | chr3_1:58138719-58138738 | None:intergenic | 45.0% |
| !! | CTTGCCTCAAATTGACTTGG+TGG | + | chr3_1:58138723-58138742 | None:intergenic | 45.0% |
| CGACTTGCCTCAAATTGACT+TGG | + | chr3_1:58138726-58138745 | None:intergenic | 45.0% | |
| ! | AGTCAATTTGAGGCAAGTCG+TGG | - | chr3_1:58138726-58138745 | Msa0364700:CDS | 45.0% |
| ! | AGTGTGGTGAAATTTTCCGG+TGG | - | chr3_1:58138777-58138796 | Msa0364700:CDS | 45.0% |
| ! | GTGTGGTGAAATTTTCCGGT+GGG | - | chr3_1:58138778-58138797 | Msa0364700:CDS | 45.0% |
| CCATTCCCAAGCTTAAATCC+AGG | + | chr3_1:58138843-58138862 | None:intergenic | 45.0% | |
| CCTGGATTTAAGCTTGGGAA+TGG | - | chr3_1:58138840-58138859 | Msa0364700:CDS | 45.0% | |
| TCTTCCTCACTGGAACAAGT+GGG | + | chr3_1:58136962-58136981 | None:intergenic | 45.0% | |
| ATCTTCCTCACTGGAACAAG+TGG | + | chr3_1:58136963-58136982 | None:intergenic | 45.0% | |
| CTGTGTTGAGAGAGAGGTTT+CGG | - | chr3_1:58137309-58137328 | Msa0364700:CDS | 45.0% | |
| GTGGTGAAAAGAAATCAGGG+AGG | - | chr3_1:58137516-58137535 | Msa0364700:CDS | 45.0% | |
| AGCATGGTGAGATGAGACAA+TGG | + | chr3_1:58138319-58138338 | None:intergenic | 45.0% | |
| GAAACTGATCAGGATTGAGG+AGG | + | chr3_1:58138428-58138447 | None:intergenic | 45.0% | |
| AAAATCCCAAGAAGCTCAGC+AGG | + | chr3_1:58138495-58138514 | None:intergenic | 45.0% | |
| !! | TAGGGTTGGCCAAAACTGTA+TGG | - | chr3_1:58138664-58138683 | Msa0364700:CDS | 45.0% |
| !! | CCTCAAATTGACTTGGTGGA+GGG | + | chr3_1:58138719-58138738 | None:intergenic | 45.0% |
| !! | CTTGCCTCAAATTGACTTGG+TGG | + | chr3_1:58138723-58138742 | None:intergenic | 45.0% |
| CGACTTGCCTCAAATTGACT+TGG | + | chr3_1:58138726-58138745 | None:intergenic | 45.0% | |
| ! | AGTCAATTTGAGGCAAGTCG+TGG | - | chr3_1:58138726-58138745 | Msa0364700:CDS | 45.0% |
| ! | AGTGTGGTGAAATTTTCCGG+TGG | - | chr3_1:58138777-58138796 | Msa0364700:CDS | 45.0% |
| ! | GTGTGGTGAAATTTTCCGGT+GGG | - | chr3_1:58138778-58138797 | Msa0364700:CDS | 45.0% |
| CCATTCCCAAGCTTAAATCC+AGG | + | chr3_1:58138843-58138862 | None:intergenic | 45.0% | |
| CCTGGATTTAAGCTTGGGAA+TGG | - | chr3_1:58138840-58138859 | Msa0364700:CDS | 45.0% | |
| GGTGACCCTTTGGATCAGAT+CGG | + | chr3_1:58136922-58136941 | None:intergenic | 50.0% | |
| ! | TGGGTTGAGGAGACATGAAG+CGG | + | chr3_1:58136943-58136962 | None:intergenic | 50.0% |
| !! | TCACTGGAACAAGTGGGTTG+AGG | + | chr3_1:58136956-58136975 | None:intergenic | 50.0% |
| TCAACCCACTTGTTCCAGTG+AGG | - | chr3_1:58136955-58136974 | Msa0364700:CDS | 50.0% | |
| CGATGAAAACGGTGACCCTT+TGG | - | chr3_1:58137079-58137098 | Msa0364700:CDS | 50.0% | |
| TGAAAACGGTGACCCTTTGG+AGG | - | chr3_1:58137082-58137101 | Msa0364700:CDS | 50.0% | |
| ! | TACAAGAAGCGCATTCACCG+TGG | - | chr3_1:58137228-58137247 | Msa0364700:CDS | 50.0% |
| ! | ACAAGAAGCGCATTCACCGT+GGG | - | chr3_1:58137229-58137248 | Msa0364700:CDS | 50.0% |
| CTCATCTTCTCTGCATCCCA+CGG | + | chr3_1:58137248-58137267 | None:intergenic | 50.0% | |
| GTGGGATGCAGAGAAGATGA+GGG | - | chr3_1:58137247-58137266 | Msa0364700:CDS | 50.0% | |
| TGTTACGGAGCTGAGGAAGT+TGG | - | chr3_1:58137286-58137305 | Msa0364700:CDS | 50.0% | |
| AGTTGGCTGTGTTGAGAGAG+AGG | - | chr3_1:58137303-58137322 | Msa0364700:CDS | 50.0% | |
| TGTTGAGAGAGAGGTTTCGG+AGG | - | chr3_1:58137312-58137331 | Msa0364700:CDS | 50.0% | |
| AGAGAGAGGTTTCGGAGGAA+TGG | - | chr3_1:58137317-58137336 | Msa0364700:CDS | 50.0% | |
| !! | AGGAATGGTGGTGGTAGGAA+AGG | - | chr3_1:58137332-58137351 | Msa0364700:CDS | 50.0% |
| !! | AATGGTGGTGGTAGGAAAGG+TGG | - | chr3_1:58137335-58137354 | Msa0364700:CDS | 50.0% |
| !! | TCGGAGAAGAGGTTTTGGTG+TGG | - | chr3_1:58137358-58137377 | Msa0364700:CDS | 50.0% |
| !! | AAGAGGTTTTGGTGTGGCGT+CGG | - | chr3_1:58137364-58137383 | Msa0364700:CDS | 50.0% |
| TCCTCCACCACTGCTTCATA+CGG | + | chr3_1:58137407-58137426 | None:intergenic | 50.0% | |
| CAGGGAGGTCTCAATCTAAG+AGG | - | chr3_1:58137531-58137550 | Msa0364700:CDS | 50.0% | |
| GGCGAAACTGATCAGGATTG+AGG | + | chr3_1:58138431-58138450 | None:intergenic | 50.0% | |
| CAATCACGGCGAAACTGATC+AGG | + | chr3_1:58138438-58138457 | None:intergenic | 50.0% | |
| AAGAAGCTCAGCAGGATCCA+TGG | + | chr3_1:58138487-58138506 | None:intergenic | 50.0% | |
| ATGGATCCTGCTGAGCTTCT+TGG | - | chr3_1:58138486-58138505 | Msa0364700:CDS | 50.0% | |
| TGGATCCTGCTGAGCTTCTT+GGG | - | chr3_1:58138487-58138506 | Msa0364700:CDS | 50.0% | |
| TGTAAAACTCACTCCTGGGG+TGG | + | chr3_1:58138635-58138654 | None:intergenic | 50.0% | |
| CCCTCCACCAAGTCAATTTG+AGG | - | chr3_1:58138716-58138735 | Msa0364700:CDS | 50.0% | |
| !! | GCCTCAAATTGACTTGGTGG+AGG | + | chr3_1:58138720-58138739 | None:intergenic | 50.0% |
| ! | TGGTGAAATTTTCCGGTGGG+CGG | - | chr3_1:58138781-58138800 | Msa0364700:CDS | 50.0% |
| GTAGGGTTTCCAGTTAGTCC+TGG | - | chr3_1:58138822-58138841 | Msa0364700:CDS | 50.0% | |
| GGTGACCCTTTGGATCAGAT+CGG | + | chr3_1:58136922-58136941 | None:intergenic | 50.0% | |
| ! | TGGGTTGAGGAGACATGAAG+CGG | + | chr3_1:58136943-58136962 | None:intergenic | 50.0% |
| !! | TCACTGGAACAAGTGGGTTG+AGG | + | chr3_1:58136956-58136975 | None:intergenic | 50.0% |
| TCAACCCACTTGTTCCAGTG+AGG | - | chr3_1:58136955-58136974 | Msa0364700:CDS | 50.0% | |
| CGATGAAAACGGTGACCCTT+TGG | - | chr3_1:58137079-58137098 | Msa0364700:CDS | 50.0% | |
| TGAAAACGGTGACCCTTTGG+AGG | - | chr3_1:58137082-58137101 | Msa0364700:CDS | 50.0% | |
| ! | TACAAGAAGCGCATTCACCG+TGG | - | chr3_1:58137228-58137247 | Msa0364700:CDS | 50.0% |
| ! | ACAAGAAGCGCATTCACCGT+GGG | - | chr3_1:58137229-58137248 | Msa0364700:CDS | 50.0% |
| CTCATCTTCTCTGCATCCCA+CGG | + | chr3_1:58137248-58137267 | None:intergenic | 50.0% | |
| GTGGGATGCAGAGAAGATGA+GGG | - | chr3_1:58137247-58137266 | Msa0364700:CDS | 50.0% | |
| TGTTACGGAGCTGAGGAAGT+TGG | - | chr3_1:58137286-58137305 | Msa0364700:CDS | 50.0% | |
| AGTTGGCTGTGTTGAGAGAG+AGG | - | chr3_1:58137303-58137322 | Msa0364700:CDS | 50.0% | |
| TGTTGAGAGAGAGGTTTCGG+AGG | - | chr3_1:58137312-58137331 | Msa0364700:CDS | 50.0% | |
| AGAGAGAGGTTTCGGAGGAA+TGG | - | chr3_1:58137317-58137336 | Msa0364700:CDS | 50.0% | |
| !! | AGGAATGGTGGTGGTAGGAA+AGG | - | chr3_1:58137332-58137351 | Msa0364700:CDS | 50.0% |
| !! | AATGGTGGTGGTAGGAAAGG+TGG | - | chr3_1:58137335-58137354 | Msa0364700:CDS | 50.0% |
| !! | TCGGAGAAGAGGTTTTGGTG+TGG | - | chr3_1:58137358-58137377 | Msa0364700:CDS | 50.0% |
| !! | AAGAGGTTTTGGTGTGGCGT+CGG | - | chr3_1:58137364-58137383 | Msa0364700:CDS | 50.0% |
| TCCTCCACCACTGCTTCATA+CGG | + | chr3_1:58137407-58137426 | None:intergenic | 50.0% | |
| CAGGGAGGTCTCAATCTAAG+AGG | - | chr3_1:58137531-58137550 | Msa0364700:CDS | 50.0% | |
| GGCGAAACTGATCAGGATTG+AGG | + | chr3_1:58138431-58138450 | None:intergenic | 50.0% | |
| CAATCACGGCGAAACTGATC+AGG | + | chr3_1:58138438-58138457 | None:intergenic | 50.0% | |
| AAGAAGCTCAGCAGGATCCA+TGG | + | chr3_1:58138487-58138506 | None:intergenic | 50.0% | |
| ATGGATCCTGCTGAGCTTCT+TGG | - | chr3_1:58138486-58138505 | Msa0364700:CDS | 50.0% | |
| TGGATCCTGCTGAGCTTCTT+GGG | - | chr3_1:58138487-58138506 | Msa0364700:CDS | 50.0% | |
| TGTAAAACTCACTCCTGGGG+TGG | + | chr3_1:58138635-58138654 | None:intergenic | 50.0% | |
| CCCTCCACCAAGTCAATTTG+AGG | - | chr3_1:58138716-58138735 | Msa0364700:CDS | 50.0% | |
| !! | GCCTCAAATTGACTTGGTGG+AGG | + | chr3_1:58138720-58138739 | None:intergenic | 50.0% |
| ! | TGGTGAAATTTTCCGGTGGG+CGG | - | chr3_1:58138781-58138800 | Msa0364700:CDS | 50.0% |
| GTAGGGTTTCCAGTTAGTCC+TGG | - | chr3_1:58138822-58138841 | Msa0364700:CDS | 50.0% | |
| GACATGAAGCGGTGACCCTT+TGG | + | chr3_1:58136932-58136951 | None:intergenic | 55.0% | |
| CGTGGGATGCAGAGAAGATG+AGG | - | chr3_1:58137246-58137265 | Msa0364700:CDS | 55.0% | |
| GAAGATGAGGGTTGCTGACG+TGG | - | chr3_1:58137259-58137278 | Msa0364700:CDS | 55.0% | |
| TGCTGACGTGGCGGTTGTTA+CGG | - | chr3_1:58137271-58137290 | Msa0364700:CDS | 55.0% | |
| GAGAGGTTTCGGAGGAATGG+TGG | - | chr3_1:58137320-58137339 | Msa0364700:CDS | 55.0% | |
| AGGTTTCGGAGGAATGGTGG+TGG | - | chr3_1:58137323-58137342 | Msa0364700:CDS | 55.0% | |
| !! | TTCGGAGGAATGGTGGTGGT+AGG | - | chr3_1:58137327-58137346 | Msa0364700:CDS | 55.0% |
| GTGGTGGTAGGAAAGGTGGT+CGG | - | chr3_1:58137339-58137358 | Msa0364700:CDS | 55.0% | |
| AGGAAAGGTGGTCGGAGAAG+AGG | - | chr3_1:58137347-58137366 | Msa0364700:CDS | 55.0% | |
| ! | GGTGGTCGGAGAAGAGGTTT+TGG | - | chr3_1:58137353-58137372 | Msa0364700:CDS | 55.0% |
| !!! | TTTTGGTGTGGCGTCGGTGA+GGG | - | chr3_1:58137370-58137389 | Msa0364700:CDS | 55.0% |
| CAGGATTGAGGAGGGATGAG+AGG | + | chr3_1:58138419-58138438 | None:intergenic | 55.0% | |
| ! | GGTGAAATTTTCCGGTGGGC+GGG | - | chr3_1:58138782-58138801 | Msa0364700:CDS | 55.0% |
| ! | TGCCAGCTGGTCAGGTTGTA+GGG | - | chr3_1:58138805-58138824 | Msa0364700:CDS | 55.0% |
| AACCCTACAACCTGACCAGC+TGG | + | chr3_1:58138810-58138829 | None:intergenic | 55.0% | |
| GACATGAAGCGGTGACCCTT+TGG | + | chr3_1:58136932-58136951 | None:intergenic | 55.0% | |
| CGTGGGATGCAGAGAAGATG+AGG | - | chr3_1:58137246-58137265 | Msa0364700:CDS | 55.0% | |
| GAAGATGAGGGTTGCTGACG+TGG | - | chr3_1:58137259-58137278 | Msa0364700:CDS | 55.0% | |
| TGCTGACGTGGCGGTTGTTA+CGG | - | chr3_1:58137271-58137290 | Msa0364700:CDS | 55.0% | |
| GAGAGGTTTCGGAGGAATGG+TGG | - | chr3_1:58137320-58137339 | Msa0364700:CDS | 55.0% | |
| AGGTTTCGGAGGAATGGTGG+TGG | - | chr3_1:58137323-58137342 | Msa0364700:CDS | 55.0% | |
| !! | TTCGGAGGAATGGTGGTGGT+AGG | - | chr3_1:58137327-58137346 | Msa0364700:CDS | 55.0% |
| GTGGTGGTAGGAAAGGTGGT+CGG | - | chr3_1:58137339-58137358 | Msa0364700:CDS | 55.0% | |
| AGGAAAGGTGGTCGGAGAAG+AGG | - | chr3_1:58137347-58137366 | Msa0364700:CDS | 55.0% | |
| ! | GGTGGTCGGAGAAGAGGTTT+TGG | - | chr3_1:58137353-58137372 | Msa0364700:CDS | 55.0% |
| !!! | TTTTGGTGTGGCGTCGGTGA+GGG | - | chr3_1:58137370-58137389 | Msa0364700:CDS | 55.0% |
| CAGGATTGAGGAGGGATGAG+AGG | + | chr3_1:58138419-58138438 | None:intergenic | 55.0% | |
| ! | GGTGAAATTTTCCGGTGGGC+GGG | - | chr3_1:58138782-58138801 | Msa0364700:CDS | 55.0% |
| ! | TGCCAGCTGGTCAGGTTGTA+GGG | - | chr3_1:58138805-58138824 | Msa0364700:CDS | 55.0% |
| AACCCTACAACCTGACCAGC+TGG | + | chr3_1:58138810-58138829 | None:intergenic | 55.0% | |
| GATGAGGGTTGCTGACGTGG+CGG | - | chr3_1:58137262-58137281 | Msa0364700:CDS | 60.0% | |
| TGGCGGTTGTTACGGAGCTG+AGG | - | chr3_1:58137279-58137298 | Msa0364700:CDS | 60.0% | |
| !!! | GTTTTGGTGTGGCGTCGGTG+AGG | - | chr3_1:58137369-58137388 | Msa0364700:CDS | 60.0% |
| TGTGGCGCCGTATGAAGCAG+TGG | - | chr3_1:58137397-58137416 | Msa0364700:CDS | 60.0% | |
| GCCGTATGAAGCAGTGGTGG+AGG | - | chr3_1:58137403-58137422 | Msa0364700:CDS | 60.0% | |
| CAGCACGGTCAAGTCCAAGC+AGG | - | chr3_1:58138606-58138625 | Msa0364700:CDS | 60.0% | |
| TCCAAGCAGGAAACCACCCC+AGG | - | chr3_1:58138619-58138638 | Msa0364700:CDS | 60.0% | |
| TCCTGGGGTGGTTTCCTGCT+TGG | + | chr3_1:58138623-58138642 | None:intergenic | 60.0% | |
| ! | GTGCCAGCTGGTCAGGTTGT+AGG | - | chr3_1:58138804-58138823 | Msa0364700:CDS | 60.0% |
| GATGAGGGTTGCTGACGTGG+CGG | - | chr3_1:58137262-58137281 | Msa0364700:CDS | 60.0% | |
| TGGCGGTTGTTACGGAGCTG+AGG | - | chr3_1:58137279-58137298 | Msa0364700:CDS | 60.0% | |
| !!! | GTTTTGGTGTGGCGTCGGTG+AGG | - | chr3_1:58137369-58137388 | Msa0364700:CDS | 60.0% |
| TGTGGCGCCGTATGAAGCAG+TGG | - | chr3_1:58137397-58137416 | Msa0364700:CDS | 60.0% | |
| GCCGTATGAAGCAGTGGTGG+AGG | - | chr3_1:58137403-58137422 | Msa0364700:CDS | 60.0% | |
| CAGCACGGTCAAGTCCAAGC+AGG | - | chr3_1:58138606-58138625 | Msa0364700:CDS | 60.0% | |
| TCCAAGCAGGAAACCACCCC+AGG | - | chr3_1:58138619-58138638 | Msa0364700:CDS | 60.0% | |
| TCCTGGGGTGGTTTCCTGCT+TGG | + | chr3_1:58138623-58138642 | None:intergenic | 60.0% | |
| ! | GTGCCAGCTGGTCAGGTTGT+AGG | - | chr3_1:58138804-58138823 | Msa0364700:CDS | 60.0% |
| GGCGCCGTATGAAGCAGTGG+TGG | - | chr3_1:58137400-58137419 | Msa0364700:CDS | 65.0% | |
| GGCGCCGTATGAAGCAGTGG+TGG | - | chr3_1:58137400-58137419 | Msa0364700:CDS | 65.0% | |
| !! | TGGTGTGGCGTCGGTGAGGG+AGG | - | chr3_1:58137373-58137392 | Msa0364700:CDS | 70.0% |
| !! | GGCGTCGGTGAGGGAGGTTG+TGG | - | chr3_1:58137379-58137398 | Msa0364700:CDS | 70.0% |
| !! | TGGTGTGGCGTCGGTGAGGG+AGG | - | chr3_1:58137373-58137392 | Msa0364700:CDS | 70.0% |
| !! | GGCGTCGGTGAGGGAGGTTG+TGG | - | chr3_1:58137379-58137398 | Msa0364700:CDS | 70.0% |
| ACCAGCTGGCACCCGCCCAC+CGG | + | chr3_1:58138796-58138815 | None:intergenic | 75.0% | |
| TGGGCGGGTGCCAGCTGGTC+AGG | - | chr3_1:58138797-58138816 | Msa0364700:CDS | 75.0% | |
| ACCAGCTGGCACCCGCCCAC+CGG | + | chr3_1:58138796-58138815 | None:intergenic | 75.0% | |
| TGGGCGGGTGCCAGCTGGTC+AGG | - | chr3_1:58138797-58138816 | Msa0364700:CDS | 75.0% | |
| ! | TCCGGTGGGCGGGTGCCAGC+TGG | - | chr3_1:58138792-58138811 | Msa0364700:CDS | 80.0% |
| ! | TCCGGTGGGCGGGTGCCAGC+TGG | - | chr3_1:58138792-58138811 | Msa0364700:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 58136894 | 58138905 | 58136894 | ID=Msa0364700;Name=Msa0364700 |
| chr3_1 | mRNA | 58136894 | 58138905 | 58136894 | ID=Msa0364700-mRNA-1;Parent=Msa0364700;Name=Msa0364700-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|0|0|1|1|1|2|0|484 |
| chr3_1 | exon | 58138230 | 58138905 | 58138230 | ID=Msa0364700-mRNA-1:exon:10947;Parent=Msa0364700-mRNA-1 |
| chr3_1 | exon | 58136894 | 58137672 | 58136894 | ID=Msa0364700-mRNA-1:exon:10946;Parent=Msa0364700-mRNA-1 |
| chr3_1 | CDS | 58138230 | 58138905 | 58138230 | ID=Msa0364700-mRNA-1:cds;Parent=Msa0364700-mRNA-1 |
| chr3_1 | CDS | 58136894 | 58137672 | 58136894 | ID=Msa0364700-mRNA-1:cds;Parent=Msa0364700-mRNA-1 |
| Gene Sequence |
| Protein sequence |
