AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0367950

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0367950 MtrunA17_Chr3g0110161 99.053 739 7 0 1 739 1 739 0.0 1515
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0367950 AT5G37510.1 78.792 745 152 1 1 739 1 745 0.0 1216
Msa0367950 AT5G37510.2 78.792 745 152 1 1 739 1 745 0.0 1216

Find 293 sgRNAs with CRISPR-Local

Find 626 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACTCCTTCTCGTGCTTTCT+TGG 0.148903 3_1:-63992117 None:intergenic
ATCAATTGATTGAATCAAAA+TGG 0.174304 3_1:+63990308 Msa0367950:exon
TGCAAAGTTTGTATATTTAA+TGG 0.190393 3_1:+63996560 Msa0367950:CDS
TTTGAAATAGTCTTGGAAAA+TGG 0.193927 3_1:-63996330 None:intergenic
TCTCCACCCTGATCACAAAT+TGG 0.219635 3_1:-63992176 None:intergenic
GTACGATATGATTTGAAATT+AGG 0.222863 3_1:+63997175 Msa0367950:three_prime_UTR
GAAGAAATTGTTGGAATATC+TGG 0.232864 3_1:+63995649 Msa0367950:CDS
TTGGGGTTGTGCGGCGGGCT+CGG 0.244343 3_1:-63990424 None:intergenic
TGCGCCATGCCCGCTCTTCC+TGG 0.245156 3_1:+63990708 Msa0367950:CDS
TGCTGACAAATTTGAGCTTT+TGG 0.249369 3_1:-63997803 None:intergenic
TATTCTTCAACTCCCAATTC+CGG 0.285395 3_1:-63993051 None:intergenic
AATGAAACTGCAACCCCATC+TGG 0.297886 3_1:+63997673 Msa0367950:three_prime_UTR
ATGGGGTTGCAGTTTCATTC+AGG 0.298110 3_1:-63997669 None:intergenic
TTGCATTTAAAGCCCGGAAT+TGG 0.299665 3_1:+63993038 Msa0367950:CDS
GACGAGAGGTTGTTCGGGTT+GGG 0.300888 3_1:-63990442 None:intergenic
GGGCTCGGGTTTGCGAAGTT+CGG 0.301515 3_1:-63990409 None:intergenic
CATAGCAGACTTTCCATTGC+TGG 0.307168 3_1:+63990630 Msa0367950:CDS
TCTGCTATCAATTCGAATAT+TGG 0.314496 3_1:-63993107 None:intergenic
GGCTCGGGTTTGCGAAGTTC+GGG 0.319677 3_1:-63990408 None:intergenic
CTCCTTCCAGTGTGGTGGTA+TGG 0.325511 3_1:-63997879 None:intergenic
GCAAAGTTTGTATATTTAAT+GGG 0.327097 3_1:+63996561 Msa0367950:CDS
TCTCGTGCTTTCTTGGCTAT+AGG 0.335594 3_1:-63992110 None:intergenic
GATATTCCAACAATTTCTTC+TGG 0.338173 3_1:-63995646 None:intergenic
TTATTTGAATGATGTAGTTT+TGG 0.339391 3_1:-63997337 None:intergenic
GGGTGGAGAGTGTGATCTTC+AGG 0.340342 3_1:+63992190 Msa0367950:CDS
GGTGGTTGGTCGGAGGGTCT+TGG 0.342530 3_1:-63990349 None:intergenic
TTGAAATAGTCTTGGAAAAT+GGG 0.343715 3_1:-63996329 None:intergenic
ATACAAACTTTGCAGATTCA+AGG 0.344116 3_1:-63996551 None:intergenic
CGTCATCGGGATTGGGGAAA+TGG 0.344502 3_1:-63990503 None:intergenic
CGTTTACCCTATGATACAAT+TGG 0.350227 3_1:+63996828 Msa0367950:CDS
AATTGATCCGATTTCAGATT+CGG 0.356657 3_1:-63990153 None:intergenic
CCATCAGGACCACGAATCAT+AGG 0.356983 3_1:-63995556 None:intergenic
TGGGGTTGTGCGGCGGGCTC+GGG 0.357938 3_1:-63990423 None:intergenic
GAGATCGACGAGAGGTTGTT+CGG 0.364463 3_1:-63990448 None:intergenic
TCGGGTTGGGGTTGTGCGGC+GGG 0.366680 3_1:-63990429 None:intergenic
GAGAGTGAGGTGGGAGGTGA+AGG 0.366898 3_1:-63990222 None:intergenic
GTTCAGGATCTTGGCATGTT+AGG 0.371949 3_1:+63992905 Msa0367950:CDS
TCAATTGATTGAATCAAAAT+GGG 0.375149 3_1:+63990309 Msa0367950:exon
CTGGCGTGAAGCCCTTTCTT+TGG 0.376057 3_1:+63995597 Msa0367950:CDS
ATTCTTCAACTCCCAATTCC+GGG 0.378095 3_1:-63993050 None:intergenic
TCAATAGCGTCATCGGGATT+GGG 0.378164 3_1:-63990510 None:intergenic
CACTAAAAGATTTCTTAAAC+AGG 0.378664 3_1:+63995701 Msa0367950:CDS
CCAGCACCAACAATGATAAC+AGG 0.379076 3_1:-63996363 None:intergenic
GTTGCAGGGGTTCAGGATCT+TGG 0.379251 3_1:+63992896 Msa0367950:CDS
TCCGCAAGCAAGGTCTTGCT+TGG 0.384804 3_1:-63997132 None:intergenic
TCACAAATTGGGCAATCTAA+TGG 0.385374 3_1:-63992164 None:intergenic
GGAACAATGCGCATGACTTC+AGG 0.385946 3_1:-63993133 None:intergenic
CTCAATAGCGTCATCGGGAT+TGG 0.387407 3_1:-63990511 None:intergenic
GGCGGGTGGTGGTTGGTCGG+AGG 0.388927 3_1:-63990356 None:intergenic
CAGGCTGCTGCACTTGACCT+TGG 0.391023 3_1:+63996504 Msa0367950:CDS
GAGGAGGAGGAGGCGGGTGG+TGG 0.391075 3_1:-63990367 None:intergenic
TTTATTACAACTTACACGTT+TGG 0.391207 3_1:-63997766 None:intergenic
AGATTGCCCAATTTGTGATC+AGG 0.398118 3_1:+63992169 Msa0367950:CDS
CAGGATCAGTCAATGGCATT+TGG 0.398437 3_1:+63992209 Msa0367950:CDS
TCCTTCCAGTGTGGTGGTAT+GGG 0.398894 3_1:-63997878 None:intergenic
ATTATGAATACTAGCATTGC+TGG 0.399661 3_1:+63995793 Msa0367950:CDS
CTTCAAGCGTGTGAGGTTGC+TGG 0.401893 3_1:+63990582 Msa0367950:CDS
CATGGAGAAGTAATACATTA+AGG 0.402841 3_1:-63996476 None:intergenic
ATTGATCCGATTTCAGATTC+GGG 0.403002 3_1:-63990152 None:intergenic
TACCAGGGCATCAAAGATAA+TGG 0.403072 3_1:+63997013 Msa0367950:CDS
ATCAGAGGTTGCAGGGGTTC+AGG 0.403687 3_1:+63992889 Msa0367950:CDS
CTGCTATGATAACAAAATCT+AGG 0.407506 3_1:-63990615 None:intergenic
AAAAGATTTCTTAAACAGGC+TGG 0.409928 3_1:+63995705 Msa0367950:CDS
TCGTCCATTTGCGCAAGGTT+TGG 0.410243 3_1:-63996882 None:intergenic
TGCATTTAAAGCCCGGAATT+GGG 0.411080 3_1:+63993039 Msa0367950:CDS
CTTGCTTGCGGAAAGCTTCT+CGG 0.413187 3_1:+63997143 Msa0367950:three_prime_UTR
GTTTACCCTATGATACAATT+GGG 0.415159 3_1:+63996829 Msa0367950:CDS
AACTATGATAACGAACATCT+TGG 0.415474 3_1:+63996264 Msa0367950:CDS
GTTAAACCAGAAGAAATTGT+TGG 0.417305 3_1:+63995640 Msa0367950:CDS
AATGTATGGGGCGAAGGAAT+TGG 0.421514 3_1:+63995736 Msa0367950:CDS
AGCGCCAAACCTTGCGCAAA+TGG 0.424180 3_1:+63996878 Msa0367950:CDS
GAAGGGTGTTGGATCGAAGA+TGG 0.427414 3_1:-63990268 None:intergenic
AGGTGGATCCATCACCATTC+GGG 0.428089 3_1:+63996955 Msa0367950:CDS
GGCTGGGGTCAAATAATGTA+TGG 0.432511 3_1:+63995722 Msa0367950:CDS
AGCGCCAGCGACGGGTGTAC+GGG 0.434794 3_1:-63990475 None:intergenic
GCGCAAGAAGCAACAGGCTT+AGG 0.435847 3_1:-63990690 None:intergenic
GGGTTTGCGAAGTTCGGGTT+TGG 0.436163 3_1:-63990403 None:intergenic
AGGTGGGAGGTGAAGGAAGA+AGG 0.436509 3_1:-63990215 None:intergenic
AATTATCTTCCAATCATCTC+TGG 0.439607 3_1:-63996778 None:intergenic
GTTGCAAGTAATAATGAGAC+AGG 0.440167 3_1:-63997490 None:intergenic
AAAAGATGGGAGAGTGAGGT+GGG 0.441182 3_1:-63990231 None:intergenic
AAACAACAAAAGCATCCTTC+GGG 0.441280 3_1:-63996611 None:intergenic
AGCCATTATCTTTGATGCCC+TGG 0.443739 3_1:-63997015 None:intergenic
AAAGATTTCTTAAACAGGCT+GGG 0.445416 3_1:+63995706 Msa0367950:CDS
ACGAGAGGTTGTTCGGGTTG+GGG 0.445721 3_1:-63990441 None:intergenic
TTCTCACTGAATGCAGCTGC+TGG 0.446093 3_1:-63996684 None:intergenic
GCGGGTGGTGGTTGGTCGGA+GGG 0.447812 3_1:-63990355 None:intergenic
CGACGAGAGGTTGTTCGGGT+TGG 0.448097 3_1:-63990443 None:intergenic
TGATTGAATCAAAATGGGGC+TGG 0.448787 3_1:+63990314 Msa0367950:exon
ACTAATGCTGATTTCAGATC+AGG 0.449684 3_1:+63995766 Msa0367950:CDS
GAAGTGACTCATTTAACATC+AGG 0.450043 3_1:-63997539 None:intergenic
CAAGGTCAAGTGCAGCAGCC+TGG 0.450413 3_1:-63996503 None:intergenic
CTCTCTCGTCCATTTGCGCA+AGG 0.451054 3_1:-63996887 None:intergenic
TGAGATGGGGCGGTAGAAAT+CGG 0.453420 3_1:+63998355 Msa0367950:three_prime_UTR
TTTGGCATTTGAAATAGTCT+TGG 0.453444 3_1:-63996337 None:intergenic
TGAAGAACAGAGAATCCTTT+CGG 0.453943 3_1:-63990564 None:intergenic
AGGAGGAGGCGGGTGGTGGT+TGG 0.454255 3_1:-63990363 None:intergenic
TATGTCCCTCAACACATTTG+TGG 0.455044 3_1:-63997441 None:intergenic
TCATTCAGGTGTGTTGACTC+TGG 0.457303 3_1:-63997655 None:intergenic
TTGAACGGAGGAGGAGGAGG+CGG 0.458930 3_1:-63990374 None:intergenic
TAAACAACAAAAGCATCCTT+CGG 0.459831 3_1:-63996612 None:intergenic
TTCCGGGCTTTAAATGCAAA+AGG 0.460040 3_1:-63993034 None:intergenic
GCAATTTCAAGAAGTGTTTG+AGG 0.460236 3_1:-63996294 None:intergenic
TCTCCAACTGTTGGAACTGC+AGG 0.461407 3_1:-63996753 None:intergenic
TTACACCAGCAAAATACAAA+TGG 0.461758 3_1:-63997209 None:intergenic
AGCAAACCCGAATCTGAAAT+CGG 0.462303 3_1:+63990146 None:intergenic
CTCCACCCTGATCACAAATT+GGG 0.462587 3_1:-63992175 None:intergenic
TTCGGGTTGGGGTTGTGCGG+CGG 0.462904 3_1:-63990430 None:intergenic
GGCATGGCGCAAGAAGCAAC+AGG 0.463187 3_1:-63990696 None:intergenic
TAGCGCCAGCGACGGGTGTA+CGG 0.465790 3_1:-63990476 None:intergenic
CAAGCCAAGGTCGGTTACAT+TGG 0.466458 3_1:+63996225 Msa0367950:CDS
CCTGTTATCATTGTTGGTGC+TGG 0.468259 3_1:+63996363 Msa0367950:CDS
CGAGCTCTGTCCGAGATAGC+AGG 0.468342 3_1:+63996801 Msa0367950:CDS
CTGTTATCATTGTTGGTGCT+GGG 0.468439 3_1:+63996364 Msa0367950:CDS
ACAGGCTTAAAGCGGCCATC+AGG 0.470321 3_1:-63995571 None:intergenic
AGATCGACGAGAGGTTGTTC+GGG 0.472706 3_1:-63990447 None:intergenic
GTTGTTTATCAAGGTCATCA+TGG 0.473741 3_1:+63996627 Msa0367950:CDS
CAATCCCGATGACGCTATTG+AGG 0.476323 3_1:+63990512 Msa0367950:CDS
TGGTTGTGATTGAACGGAGG+AGG 0.478120 3_1:-63990383 None:intergenic
CAACCTCTGCTACCAAAGAA+AGG 0.479683 3_1:-63995609 None:intergenic
AAGGTGGATCCATCACCATT+CGG 0.479718 3_1:+63996954 Msa0367950:CDS
GATGTTGAATTGAGAAAAGA+TGG 0.480518 3_1:-63990245 None:intergenic
CTCTGTTCTTCAAGCGTGTG+AGG 0.480791 3_1:+63990575 Msa0367950:CDS
TAAACGCACCCCTGCTATCT+CGG 0.480951 3_1:-63996811 None:intergenic
GCTGCCATTGTAAGAGTGTA+AGG 0.481558 3_1:-63997915 None:intergenic
CGGGTTTGGTTGTGATTGAA+CGG 0.482014 3_1:-63990389 None:intergenic
CATTGTTCCTCGTTTAAATG+AGG 0.482600 3_1:+63993147 Msa0367950:CDS
AATTGTTTAGAATCGTGAAA+TGG 0.482890 3_1:-63997965 None:intergenic
AAGGTCAAGTGCAGCAGCCT+GGG 0.483480 3_1:-63996502 None:intergenic
GCCGCTTTAAGCCTGTGAAC+TGG 0.484016 3_1:+63995578 Msa0367950:CDS
AAGCCAAGGTCGGTTACATT+GGG 0.484241 3_1:+63996226 Msa0367950:CDS
TGAACGGAGGAGGAGGAGGC+GGG 0.484386 3_1:-63990373 None:intergenic
TCCACCTTCTTAGTGAAGGT+TGG 0.484390 3_1:-63996939 None:intergenic
GATTGAATCAAAATGGGGCT+GGG 0.485528 3_1:+63990315 Msa0367950:exon
CAATGTAACCGACCTTGGCT+TGG 0.485781 3_1:-63996224 None:intergenic
ATACCTGGGTGCCAACCAAC+AGG 0.486083 3_1:-63995837 None:intergenic
TTGGAGACTCCAGAGATGAT+TGG 0.491323 3_1:+63996769 Msa0367950:CDS
TTTGAAGTGAGTGCTCCTAC+AGG 0.494027 3_1:-63993010 None:intergenic
GATTGCCCAATTTGTGATCA+GGG 0.494519 3_1:+63992170 Msa0367950:CDS
ATGATGGTTTGAAGAGGCAG+AGG 0.496611 3_1:+63995524 Msa0367950:CDS
TTTCCTGTTGGTTGGCACCC+AGG 0.498602 3_1:+63995834 Msa0367950:CDS
AAGGGTGTTGGATCGAAGAT+GGG 0.499863 3_1:-63990267 None:intergenic
TCAAATAATGTATGGGGCGA+AGG 0.502062 3_1:+63995730 Msa0367950:CDS
CAAACCATCATAACAAAAGC+GGG 0.502070 3_1:-63995512 None:intergenic
TTGTGATTGAACGGAGGAGG+AGG 0.502135 3_1:-63990380 None:intergenic
CACACATTCTGTAAAATATG+TGG 0.502947 3_1:-63997727 None:intergenic
TGAGAAAAGATGGGAGAGTG+AGG 0.503407 3_1:-63990235 None:intergenic
AGTGAAGATGGCAATGCAGC+TGG 0.503709 3_1:-63996912 None:intergenic
AGAATCTAACCAGGAAGAGC+GGG 0.505711 3_1:-63990717 None:intergenic
CGTGGTAGTGGAGAAGAGAT+TGG 0.506494 3_1:+63992929 Msa0367950:CDS
TTGGATTGCACATGCTTCCA+AGG 0.506814 3_1:-63997318 None:intergenic
GAAAAGATGGGAGAGTGAGG+TGG 0.506851 3_1:-63990232 None:intergenic
GAAAGCACGAGAAGGAGTGA+TGG 0.508097 3_1:+63992121 Msa0367950:CDS
TTTATGAGAAAGAAGGGTGT+TGG 0.508152 3_1:-63990279 None:intergenic
GAAAACCTCAATAGCGTCAT+CGG 0.508967 3_1:-63990517 None:intergenic
GCTGAAAGAGTGGTGCATAC+AGG 0.509427 3_1:-63997940 None:intergenic
ACGGAGGAGGAGGAGGCGGG+TGG 0.509605 3_1:-63990370 None:intergenic
GCAGATGCTTTCCTGTTGGT+TGG 0.510700 3_1:+63995826 Msa0367950:CDS
GGAATATCGTCAGATCTGAT+TGG 0.510941 3_1:+63996448 Msa0367950:CDS
AGGGCTTCACGCCAGTTCAC+AGG 0.513098 3_1:-63995589 None:intergenic
AGCCCTTTCTTTGGTAGCAG+AGG 0.515340 3_1:+63995606 Msa0367950:CDS
TGATTGAACGGAGGAGGAGG+AGG 0.515847 3_1:-63990377 None:intergenic
GGTGCTGCTTCATATACTCT+AGG 0.516465 3_1:-63997420 None:intergenic
GCGGAAAGCTTCTCGGACGT+TGG 0.516627 3_1:+63997150 Msa0367950:three_prime_UTR
TCCAAATTTGCAGCCACGGG+TGG 0.516967 3_1:+63996155 Msa0367950:intron
ACCGCAATCCCGAATGGTGA+TGG 0.517659 3_1:-63996963 None:intergenic
GTAATAGATATCTGCCCTGT+AGG 0.517990 3_1:+63992995 Msa0367950:CDS
AAGATTTCTTAAACAGGCTG+GGG 0.519660 3_1:+63995707 Msa0367950:CDS
GCCACGGGTGGAAGCTGCTA+TGG 0.519839 3_1:+63996167 Msa0367950:intron
AAAAGCTCAAATTTGTCAGC+AGG 0.523277 3_1:+63997805 Msa0367950:three_prime_UTR
CACGGTGCATTCAATGTACA+AGG 0.523747 3_1:+63992312 Msa0367950:CDS
AAGGTTGGTCTCAGTGAAGA+TGG 0.527216 3_1:-63996924 None:intergenic
GTGCAGCAGCCTGGGCAGCA+TGG 0.527867 3_1:-63996494 None:intergenic
TCCATCACCATTCGGGATTG+CGG 0.530979 3_1:+63996962 Msa0367950:CDS
GATTCGCATCAGAGGTTGCA+GGG 0.532762 3_1:+63992882 Msa0367950:CDS
TCAAACCATCATAACAAAAG+CGG 0.533289 3_1:-63995513 None:intergenic
TGGACTCTAGCGCCAGCGAC+GGG 0.533397 3_1:-63990483 None:intergenic
ACTCCCCGTACACCCGTCGC+TGG 0.533775 3_1:+63990471 Msa0367950:CDS
TCTCTGGAGTCTCCAACTGT+TGG 0.533784 3_1:-63996762 None:intergenic
CAGATTGGGGCACAAGTCCA+AGG 0.534798 3_1:-63996521 None:intergenic
TGTCTCATAAAATGAAACCT+TGG 0.535900 3_1:+63997301 Msa0367950:three_prime_UTR
GGCATGTTAGGTCGTGGTAG+TGG 0.535963 3_1:+63992917 Msa0367950:CDS
ATCCACGCTCAAACCCAGAT+GGG 0.537345 3_1:-63997687 None:intergenic
AAGCAAGGTCTTGCTTGGCC+AGG 0.537505 3_1:-63997127 None:intergenic
ATATGACTGATGCAATTACC+AGG 0.537594 3_1:+63996997 Msa0367950:CDS
CAGCACCACAAATGTGTTGA+GGG 0.538891 3_1:+63997436 Msa0367950:three_prime_UTR
AAAACCTCAATAGCGTCATC+GGG 0.538929 3_1:-63990516 None:intergenic
AACCTCTGCTACCAAAGAAA+GGG 0.540408 3_1:-63995608 None:intergenic
TTGTCGTATGTGTCTTGTTG+AGG 0.541076 3_1:+63990656 Msa0367950:CDS
GATAACGAACATCTTGGTAC+TGG 0.541143 3_1:+63996270 Msa0367950:CDS
CCGCCCCATCTCATTCCATC+CGG 0.541441 3_1:-63998345 None:intergenic
AGGCCCAATGTAACCGACCT+TGG 0.541841 3_1:-63996229 None:intergenic
TGGCCTGCAGTTCCAACAGT+TGG 0.541849 3_1:+63996750 Msa0367950:CDS
TTGGCGCTACAGTCCTCAGT+CGG 0.542821 3_1:-63996863 None:intergenic
CCAGCAAAATACAAATGGAA+TGG 0.543143 3_1:-63997204 None:intergenic
AGCAGCTGCATTCAGTGAGA+AGG 0.545961 3_1:+63996686 Msa0367950:CDS
CCTATGATTCGTGGTCCTGA+TGG 0.547239 3_1:+63995556 Msa0367950:CDS
AAACATATCTTCATGTTCAA+AGG 0.547900 3_1:-63997566 None:intergenic
AAGAATCTAACCAGGAAGAG+CGG 0.548163 3_1:-63990718 None:intergenic
TTGTGAGTTTATGAGAAAGA+AGG 0.551355 3_1:-63990286 None:intergenic
ATTACTTCTCCATGCTGCCC+AGG 0.551990 3_1:+63996485 Msa0367950:CDS
TGGCGCTACAGTCCTCAGTC+GGG 0.554048 3_1:-63996862 None:intergenic
CTCACCGGATGGAATGAGAT+GGG 0.554149 3_1:+63998341 Msa0367950:intron
GCTGGGGTCAAATAATGTAT+GGG 0.555168 3_1:+63995723 Msa0367950:CDS
AACACTTCTTGAAATTGCTG+AGG 0.556487 3_1:+63996299 Msa0367950:CDS
CAATAGCGTCATCGGGATTG+GGG 0.556586 3_1:-63990509 None:intergenic
CTAACCAGGAAGAGCGGGCA+TGG 0.557243 3_1:-63990712 None:intergenic
ATGGACTCTAGCGCCAGCGA+CGG 0.557366 3_1:-63990484 None:intergenic
TCATAGTTAAAATCAGTAGC+AGG 0.558013 3_1:-63996249 None:intergenic
AGATTCGCATCAGAGGTTGC+AGG 0.558678 3_1:+63992881 Msa0367950:CDS
GGAGGCGGGTGGTGGTTGGT+CGG 0.559783 3_1:-63990359 None:intergenic
GGGAGCTGATGATACAAACT+TGG 0.560243 3_1:+63996581 Msa0367950:CDS
GGGGAGTTCGCGCCCGACTG+AGG 0.561987 3_1:+63996850 Msa0367950:CDS
GTTGAAACCATCGCAAAACA+AGG 0.564233 3_1:+63996426 Msa0367950:CDS
TCCACCTTACACTCTTACAA+TGG 0.566175 3_1:+63997911 Msa0367950:three_prime_UTR
GAGCTCTGTCCGAGATAGCA+GGG 0.566857 3_1:+63996802 Msa0367950:CDS
ATTGATGTTACTGATGCTGT+TGG 0.567155 3_1:+63993082 Msa0367950:CDS
ATGAAACTGCAACCCCATCT+GGG 0.567537 3_1:+63997674 Msa0367950:three_prime_UTR
TGATCTTCAGGATCAGTCAA+TGG 0.567607 3_1:+63992202 Msa0367950:CDS
GGACTAACCCGAATTGTACA+TGG 0.571193 3_1:-63997256 None:intergenic
CATCAGGACCACGAATCATA+GGG 0.571545 3_1:-63995555 None:intergenic
GGCTGCTCCTTCCAGTGTGG+TGG 0.572723 3_1:-63997884 None:intergenic
AAGGATGCACACAGCAAACA+TGG 0.573067 3_1:+63996730 Msa0367950:CDS
CTCATGACAAGTGAACTCTC+TGG 0.573975 3_1:+63992968 Msa0367950:CDS
CGAGAAGCTTTCCGCAAGCA+AGG 0.575896 3_1:-63997142 None:intergenic
TTAAATGACCCTATGATTCG+TGG 0.576146 3_1:+63995547 Msa0367950:CDS
CATACGACAATTTCCAGCAA+TGG 0.579258 3_1:-63990643 None:intergenic
TGTGAGTTTATGAGAAAGAA+GGG 0.580420 3_1:-63990285 None:intergenic
TATCCACGCTCAAACCCAGA+TGG 0.580657 3_1:-63997688 None:intergenic
GATCTTGGCATGTTAGGTCG+TGG 0.583375 3_1:+63992911 Msa0367950:CDS
ACCCCATCTGGGTTTGAGCG+TGG 0.585189 3_1:+63997685 Msa0367950:three_prime_UTR
AACAGCATCAGTAACATCAA+TGG 0.585328 3_1:-63993080 None:intergenic
ACACTTCTTGAAATTGCTGA+GGG 0.586259 3_1:+63996300 Msa0367950:CDS
TTGTTCGGGTTGGGGTTGTG+CGG 0.586318 3_1:-63990433 None:intergenic
AGATGGGAGAGTGAGGTGGG+AGG 0.588224 3_1:-63990228 None:intergenic
TTCTCAACCGCAATCCCGAA+TGG 0.588558 3_1:-63996969 None:intergenic
ACTCACCGGATGGAATGAGA+TGG 0.590930 3_1:+63998340 Msa0367950:intron
ATTATCAGAACTATTAGATG+AGG 0.591864 3_1:+63998384 Msa0367950:three_prime_UTR
TGCAGGACATAAACGAAGAG+TGG 0.593125 3_1:+63995476 Msa0367950:intron
TCCCATACCACCACACTGGA+AGG 0.593387 3_1:+63997877 Msa0367950:three_prime_UTR
GAGACCAACCTTCACTAAGA+AGG 0.595141 3_1:+63996935 Msa0367950:CDS
TTTACCCTATGATACAATTG+GGG 0.596584 3_1:+63996830 Msa0367950:CDS
TGGATCCACCTTCTTAGTGA+AGG 0.596835 3_1:-63996943 None:intergenic
TTGAAGTGAGTGCTCCTACA+GGG 0.600626 3_1:-63993009 None:intergenic
ATCGTCAGATCTGATTGGAA+TGG 0.601210 3_1:+63996453 Msa0367950:CDS
ATGGCATTTGGCTCTGATCG+TGG 0.602789 3_1:+63992221 Msa0367950:CDS
AACAGTAATTGACAGGAGCT+AGG 0.603433 3_1:-63997999 None:intergenic
AATATTCGAATTGATAGCAG+AGG 0.605002 3_1:+63993109 Msa0367950:CDS
ACCATAGCAGCTTCCACCCG+TGG 0.605776 3_1:-63996168 None:intergenic
TAAGAGTGTAAGGTGGAAAG+TGG 0.606116 3_1:-63997905 None:intergenic
GCAGCACCACAAATGTGTTG+AGG 0.607116 3_1:+63997435 Msa0367950:three_prime_UTR
GTGTGTTAGATTCGCATCAG+AGG 0.608633 3_1:+63992874 Msa0367950:CDS
GAAAGCAGATGCTTTCCTGT+TGG 0.608999 3_1:+63995822 Msa0367950:CDS
AAGTGACTCATTTAACATCA+GGG 0.610361 3_1:-63997538 None:intergenic
TACCCCGTTAAAATTCCGAA+AGG 0.610431 3_1:+63990549 Msa0367950:CDS
GTCATCACAGTCTTTACCAA+AGG 0.611871 3_1:-63992290 None:intergenic
GCCAGTTCACAGGCTTAAAG+CGG 0.612009 3_1:-63995579 None:intergenic
ACCAACCTTCACTAAGAAGG+TGG 0.614871 3_1:+63996938 Msa0367950:CDS
GCCAAGCAAGACCTTGCTTG+CGG 0.618572 3_1:+63997131 Msa0367950:three_prime_UTR
GCGCCAGCGACGGGTGTACG+GGG 0.624880 3_1:-63990474 None:intergenic
GGTACATATGAAAATACTGA+AGG 0.625208 3_1:+63996711 Msa0367950:CDS
TTTGTTATGATGGTTTGAAG+AGG 0.631528 3_1:+63995518 Msa0367950:CDS
GAAAGAGTGGTGCATACAGG+AGG 0.638412 3_1:-63997937 None:intergenic
CCGGATGGAATGAGATGGGG+CGG 0.641578 3_1:+63998345 Msa0367950:intron
GTTTGGTTGTGATTGAACGG+AGG 0.642743 3_1:-63990386 None:intergenic
ATAGCCAAGAAAGCACGAGA+AGG 0.643724 3_1:+63992113 Msa0367950:CDS
AGTGGCTGCTCCTTCCAGTG+TGG 0.643923 3_1:-63997887 None:intergenic
CAGCACCAACAATGATAACA+GGG 0.645958 3_1:-63996362 None:intergenic
GCTGCATTCAGTGAGAAGGA+AGG 0.652544 3_1:+63996690 Msa0367950:CDS
CTGGGGTCAAATAATGTATG+GGG 0.653742 3_1:+63995724 Msa0367950:CDS
TAGAATACGCAAGACTGTCA+CGG 0.655290 3_1:+63996197 Msa0367950:CDS
TCCACGCTCAAACCCAGATG+GGG 0.655649 3_1:-63997686 None:intergenic
CAATTGATTGAATCAAAATG+GGG 0.656665 3_1:+63990310 Msa0367950:exon
GAACTATTAGATGAGGTCTG+AGG 0.660767 3_1:+63998391 Msa0367950:three_prime_UTR
ATTCGCATCAGAGGTTGCAG+GGG 0.664579 3_1:+63992883 Msa0367950:CDS
TGATATGAAGAGATCTGTGG+TGG 0.665318 3_1:+63992253 Msa0367950:CDS
TTGAAACCATCGCAAAACAA+GGG 0.668125 3_1:+63996427 Msa0367950:CDS
GCCATTGTAAGAGTGTAAGG+TGG 0.669170 3_1:-63997912 None:intergenic
TCACCGGATGGAATGAGATG+GGG 0.673142 3_1:+63998342 Msa0367950:intron
TATGACTGATGCAATTACCA+GGG 0.680312 3_1:+63996998 Msa0367950:CDS
AGCTCTGTCCGAGATAGCAG+GGG 0.680552 3_1:+63996803 Msa0367950:CDS
ACGGCAAACCAAGCCAAGGT+CGG 0.681995 3_1:+63996216 Msa0367950:CDS
TGTCACGGCAAACCAAGCCA+AGG 0.683373 3_1:+63996212 Msa0367950:CDS
ATGTTGAATTGAGAAAAGAT+GGG 0.684496 3_1:-63990244 None:intergenic
GCAGTCCCATACCACCACAC+TGG 0.684857 3_1:+63997873 Msa0367950:three_prime_UTR
TTACCCTATGATACAATTGG+GGG 0.685077 3_1:+63996831 Msa0367950:CDS
TGCCCAATTTGTGATCAGGG+TGG 0.691459 3_1:+63992173 Msa0367950:CDS
CACTGATATGAAGAGATCTG+TGG 0.705213 3_1:+63992250 Msa0367950:CDS
CGGGGAGTGAGATCGACGAG+AGG 0.710019 3_1:-63990456 None:intergenic
AAACTTGGACAAGATCCCGA+AGG 0.712042 3_1:+63996596 Msa0367950:CDS
TGAAATGGAAGCTGAAAGAG+TGG 0.730036 3_1:-63997950 None:intergenic
TGGTAAAGACTGTGATGACA+CGG 0.740395 3_1:+63992294 Msa0367950:CDS
AATCTAACCTCATTTAAACG+AGG 0.753181 3_1:-63993154 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GTTAAAAAAATCATTTTTTA+TGG + chr3_1:63991120-63991139 Msa0367950:intron 10.0%
!!! ATTACATTTTTAACAATAAA+TGG - chr3_1:63992046-63992065 None:intergenic 10.0%
!! ATATGATTAAAATAATATTC+TGG + chr3_1:63992609-63992628 Msa0367950:intron 10.0%
!!! GATTTTCAAATTTTATTAAT+TGG + chr3_1:63993491-63993510 Msa0367950:intron 10.0%
!!! ATAACATTTTTAAAAAGTTT+GGG - chr3_1:63994109-63994128 None:intergenic 10.0%
!!! AATAACATTTTTAAAAAGTT+TGG - chr3_1:63994110-63994129 None:intergenic 10.0%
!!! AATAAAATTATTCGATATTT+TGG - chr3_1:63994845-63994864 None:intergenic 10.0%
!!! ATATTTTTGGTATATAATAA+TGG + chr3_1:63995036-63995055 Msa0367950:intron 10.0%
!!! TATGAAAATTATTGTTTTAT+TGG + chr3_1:63996026-63996045 Msa0367950:intron 10.0%
!!! TGTTTGAAAAAATAGATTTT+GGG - chr3_1:63991078-63991097 None:intergenic 15.0%
!!! ACTATTAAGTTTAATACTTT+TGG - chr3_1:63991564-63991583 None:intergenic 15.0%
!! AAAATTATCATATGTTTAGT+TGG + chr3_1:63991906-63991925 Msa0367950:intron 15.0%
!!! ATCTTACTTTTAATTTCATT+TGG + chr3_1:63991960-63991979 Msa0367950:intron 15.0%
!! TATAATCATATGTTCAATTT+AGG + chr3_1:63992065-63992084 Msa0367950:intron 15.0%
!! ATAATCATATGTTCAATTTA+GGG + chr3_1:63992066-63992085 Msa0367950:intron 15.0%
!! ATATATATTAAATTAAGTGG+TGG + chr3_1:63992532-63992551 Msa0367950:intron 15.0%
!! CTATTATCACAATTTATTAT+GGG + chr3_1:63993657-63993676 Msa0367950:intron 15.0%
!!! TTTTTTAAGTGTTATTTACT+GGG + chr3_1:63993920-63993939 Msa0367950:intron 15.0%
!!! TAACATTTTTAAAAAGTTTG+GGG - chr3_1:63994108-63994127 None:intergenic 15.0%
!!! ATAATAATGGTATAATTTTG+TGG + chr3_1:63995049-63995068 Msa0367950:intron 15.0%
!! TTAAAGACGAAAAATAAAAA+TGG - chr3_1:63996077-63996096 None:intergenic 15.0%
!!! CGTGTATTATTTATTTTTTT+TGG + chr3_1:63997070-63997089 Msa0367950:three_prime_UTR 15.0%
!!! TTACCATTTTATTATTGTTA+AGG - chr3_1:63998300-63998319 None:intergenic 15.0%
!! ATCAATTGATTGAATCAAAA+TGG + chr3_1:63990308-63990327 Msa0367950:exon 20.0%
!! TCAATTGATTGAATCAAAAT+GGG + chr3_1:63990309-63990328 Msa0367950:exon 20.0%
!!! GTGTTTGAAAAAATAGATTT+TGG - chr3_1:63991079-63991098 None:intergenic 20.0%
!!! AAAAAATCATTTTTTATGGG+CGG + chr3_1:63991124-63991143 Msa0367950:intron 20.0%
!!! GTTATTTTCAAATTTCTAGT+TGG + chr3_1:63991607-63991626 Msa0367950:intron 20.0%
!! TGATATTCTTGTAAGAATTA+AGG + chr3_1:63992478-63992497 Msa0367950:intron 20.0%
!! ATTTAATTGACAACAAAAAG+AGG - chr3_1:63992783-63992802 None:intergenic 20.0%
!!! ATGTTTTATTAAACTACTTG+CGG + chr3_1:63993186-63993205 Msa0367950:intron 20.0%
!! ACAACCAATTAAATAAATCA+AGG - chr3_1:63993414-63993433 None:intergenic 20.0%
!! TGATTTATTTAATTGGTTGT+AGG + chr3_1:63993414-63993433 Msa0367950:intron 20.0%
!! TAATAAATTGTGATAATAGG+AGG - chr3_1:63993656-63993675 None:intergenic 20.0%
!! CCATAATAAATTGTGATAAT+AGG - chr3_1:63993659-63993678 None:intergenic 20.0%
!! CCTATTATCACAATTTATTA+TGG + chr3_1:63993656-63993675 Msa0367950:intron 20.0%
!!! GTTTTTTAAGTGTTATTTAC+TGG + chr3_1:63993919-63993938 Msa0367950:intron 20.0%
!!! AACATTTTTAAAAAGTTTGG+GGG - chr3_1:63994107-63994126 None:intergenic 20.0%
!!! GAGATGATGTTTTATATTTA+GGG + chr3_1:63994415-63994434 Msa0367950:intron 20.0%
!! TAATGTCTAACAAATGTTTA+CGG + chr3_1:63994559-63994578 Msa0367950:intron 20.0%
!! TTAGAGTTAGAAATTCATAT+GGG + chr3_1:63994585-63994604 Msa0367950:intron 20.0%
!!! AAAATTATTCGATATTTTGG+CGG - chr3_1:63994842-63994861 None:intergenic 20.0%
!!! ATTATAATTTGTAGATTCTG+AGG + chr3_1:63995005-63995024 Msa0367950:intron 20.0%
!! AATAAATTAGAGATATACCT+GGG - chr3_1:63995854-63995873 None:intergenic 20.0%
!! AAATAAATTAGAGATATACC+TGG - chr3_1:63995855-63995874 None:intergenic 20.0%
!! AGATATTAATGCATAAAAGA+TGG - chr3_1:63996106-63996125 None:intergenic 20.0%
!!! ATCTTTTATGCATTAATATC+TGG + chr3_1:63996105-63996124 Msa0367950:intron 20.0%
!! TGCAAAGTTTGTATATTTAA+TGG + chr3_1:63996560-63996579 Msa0367950:CDS 20.0%
!! GCAAAGTTTGTATATTTAAT+GGG + chr3_1:63996561-63996580 Msa0367950:CDS 20.0%
!!! TTATTTGAATGATGTAGTTT+TGG - chr3_1:63997340-63997359 None:intergenic 20.0%
!! GATCCTTAACAATAATAAAA+TGG + chr3_1:63998294-63998313 Msa0367950:intron 20.0%
! ATGTTGAATTGAGAAAAGAT+GGG - chr3_1:63990247-63990266 None:intergenic 25.0%
! CAATTGATTGAATCAAAATG+GGG + chr3_1:63990310-63990329 Msa0367950:exon 25.0%
!!! CTACTACACTTATTTTAATC+CGG - chr3_1:63990879-63990898 None:intergenic 25.0%
!!! TTTTGTCATTTGTAAGTGTT+AGG + chr3_1:63990994-63991013 Msa0367950:intron 25.0%
!!! GAAAAAATAGATTTTGGGAA+AGG - chr3_1:63991073-63991092 None:intergenic 25.0%
!!! CTATTTTTTCAAACACAAAG+AGG + chr3_1:63991083-63991102 Msa0367950:intron 25.0%
! ACAATATTAGATAGAGAGTT+GGG + chr3_1:63991232-63991251 Msa0367950:intron 25.0%
! TATGAGAGAAACTATTAAGA+AGG + chr3_1:63991402-63991421 Msa0367950:intron 25.0%
! TATATGATAGAACATTATGC+CGG + chr3_1:63991458-63991477 Msa0367950:intron 25.0%
!!! TGATTCTTTTGATTAGTTCA+AGG + chr3_1:63991538-63991557 Msa0367950:intron 25.0%
! AAAAAGAAATGTCAACTAGA+TGG - chr3_1:63991752-63991771 None:intergenic 25.0%
! TATCATATGTTTAGTTGGTT+TGG + chr3_1:63991911-63991930 Msa0367950:intron 25.0%
!! ATCATATGTTTAGTTGGTTT+GGG + chr3_1:63991912-63991931 Msa0367950:intron 25.0%
! TAAAGATAATCAAGTTTGCA+AGG - chr3_1:63992347-63992366 None:intergenic 25.0%
!! TTGATAACTATATCATACCT+TGG + chr3_1:63992377-63992396 Msa0367950:intron 25.0%
! TAAATTAAAAGAAACCTAGC+TGG - chr3_1:63992688-63992707 None:intergenic 25.0%
!!! GCTAGGTTTCTTTTAATTTA+TGG + chr3_1:63992688-63992707 Msa0367950:intron 25.0%
!! ATTTTATCTGAGTTCCTTAA+TGG + chr3_1:63992821-63992840 Msa0367950:intron 25.0%
! AATTCATACTACGAAATCAT+AGG - chr3_1:63993301-63993320 None:intergenic 25.0%
! CTGACCTTGATTTATTTAAT+TGG + chr3_1:63993407-63993426 Msa0367950:intron 25.0%
! AAGTAATCAGGTTAATATCA+GGG - chr3_1:63993578-63993597 None:intergenic 25.0%
! AAAGTAATCAGGTTAATATC+AGG - chr3_1:63993579-63993598 None:intergenic 25.0%
! ATCTTGTGAAAAATTAGCAT+GGG - chr3_1:63994032-63994051 None:intergenic 25.0%
! TATCTTGTGAAAAATTAGCA+TGG - chr3_1:63994033-63994052 None:intergenic 25.0%
!! ATGCTAATTTTTCACAAGAT+AGG + chr3_1:63994032-63994051 Msa0367950:intron 25.0%
!! TGCTAATTTTTCACAAGATA+GGG + chr3_1:63994033-63994052 Msa0367950:intron 25.0%
! TATAAAACATCATCTCCAAA+AGG - chr3_1:63994411-63994430 None:intergenic 25.0%
!! GGAGATGATGTTTTATATTT+AGG + chr3_1:63994414-63994433 Msa0367950:intron 25.0%
!! AGAATGTATATCTTAGCTTT+AGG + chr3_1:63994443-63994462 Msa0367950:intron 25.0%
!!! GAATGTATATCTTAGCTTTA+GGG + chr3_1:63994444-63994463 Msa0367950:intron 25.0%
! TTTGTTAGACATTAGGAATT+AGG - chr3_1:63994553-63994572 None:intergenic 25.0%
!! GTAAACATTTGTTAGACATT+AGG - chr3_1:63994560-63994579 None:intergenic 25.0%
! GTTAGAGTTAGAAATTCATA+TGG + chr3_1:63994584-63994603 Msa0367950:intron 25.0%
! AGAGAAGTTATTAAGTATGA+TGG + chr3_1:63994657-63994676 Msa0367950:intron 25.0%
!!! TGAGGTATCTCTAATATTTT+TGG + chr3_1:63995023-63995042 Msa0367950:intron 25.0%
! TATATGCTTAATTTAGCAGA+AGG + chr3_1:63995404-63995423 Msa0367950:intron 25.0%
! ATATGCTTAATTTAGCAGAA+GGG + chr3_1:63995405-63995424 Msa0367950:intron 25.0%
! CACTAAAAGATTTCTTAAAC+AGG + chr3_1:63995701-63995720 Msa0367950:CDS 25.0%
!!! ACTTCTCTAGTTTTATGTTA+TGG + chr3_1:63995884-63995903 Msa0367950:intron 25.0%
! CAATATATAACAGGAATCAT+TGG - chr3_1:63995914-63995933 None:intergenic 25.0%
! ATCGCATTTCAATATATAAC+AGG - chr3_1:63995923-63995942 None:intergenic 25.0%
!! TTGAAATAGTCTTGGAAAAT+GGG - chr3_1:63996332-63996351 None:intergenic 25.0%
!! TTTGAAATAGTCTTGGAAAA+TGG - chr3_1:63996333-63996352 None:intergenic 25.0%
!! GTACGATATGATTTGAAATT+AGG + chr3_1:63997175-63997194 Msa0367950:three_prime_UTR 25.0%
!! AATTTTTGCCATGTACAATT+CGG + chr3_1:63997248-63997267 Msa0367950:three_prime_UTR 25.0%
!! GTAAACTTTTAACAAACAGT+CGG - chr3_1:63997280-63997299 None:intergenic 25.0%
! AAACATATCTTCATGTTCAA+AGG - chr3_1:63997569-63997588 None:intergenic 25.0%
! TTTATTACAACTTACACGTT+TGG - chr3_1:63997769-63997788 None:intergenic 25.0%
!! AATTGTTTAGAATCGTGAAA+TGG - chr3_1:63997968-63997987 None:intergenic 25.0%
! AAATCAAGCTATGAAGAATT+CGG + chr3_1:63998082-63998101 Msa0367950:intron 25.0%
! ATTATCAGAACTATTAGATG+AGG + chr3_1:63998384-63998403 Msa0367950:three_prime_UTR 25.0%
AATTGATCCGATTTCAGATT+CGG - chr3_1:63990156-63990175 None:intergenic 30.0%
! TGAATTTTGCTTGGAGTTAT+GGG - chr3_1:63990192-63990211 None:intergenic 30.0%
! ATGAATTTTGCTTGGAGTTA+TGG - chr3_1:63990193-63990212 None:intergenic 30.0%
! AGAAGGAAATGAATTTTGCT+TGG - chr3_1:63990201-63990220 None:intergenic 30.0%
GATGTTGAATTGAGAAAAGA+TGG - chr3_1:63990248-63990267 None:intergenic 30.0%
TGTGAGTTTATGAGAAAGAA+GGG - chr3_1:63990288-63990307 None:intergenic 30.0%
TTGTGAGTTTATGAGAAAGA+AGG - chr3_1:63990289-63990308 None:intergenic 30.0%
!! AATCCTTTCGGAATTTTAAC+GGG - chr3_1:63990555-63990574 None:intergenic 30.0%
! GAATCCTTTCGGAATTTTAA+CGG - chr3_1:63990556-63990575 None:intergenic 30.0%
CTGCTATGATAACAAAATCT+AGG - chr3_1:63990618-63990637 None:intergenic 30.0%
AAAAGAGTAAGAATCTAACC+AGG - chr3_1:63990729-63990748 None:intergenic 30.0%
!!! CTCTTTTTTTTTTCTGTTGC+TGG + chr3_1:63990742-63990761 Msa0367950:intron 30.0%
!!! TGAGTTTTGTTGTGTGTAAA+TGG + chr3_1:63990829-63990848 Msa0367950:intron 30.0%
TAGAGATGAAGATATTGCAT+TGG + chr3_1:63990896-63990915 Msa0367950:intron 30.0%
TAATGCTAGACCATGATTTA+GGG + chr3_1:63990927-63990946 Msa0367950:intron 30.0%
TCATTTGTAAGTGTTAGGTT+AGG + chr3_1:63990999-63991018 Msa0367950:intron 30.0%
GACAATATTAGATAGAGAGT+TGG + chr3_1:63991231-63991250 Msa0367950:intron 30.0%
CAATATTAGATAGAGAGTTG+GGG + chr3_1:63991233-63991252 Msa0367950:intron 30.0%
! AATAAGGAGAGTATATCAGA+TGG + chr3_1:63991336-63991355 Msa0367950:intron 30.0%
! GTTTCTCTCATAGTTTTTCT+AGG - chr3_1:63991394-63991413 None:intergenic 30.0%
! AGAGATTAATGAGTTGGATA+AGG + chr3_1:63991429-63991448 Msa0367950:intron 30.0%
CTATTAGACACATAACTAGA+TGG - chr3_1:63991711-63991730 None:intergenic 30.0%
!! TCATATGTTTAGTTGGTTTG+GGG + chr3_1:63991913-63991932 Msa0367950:intron 30.0%
!! ACCTTGATTTTGTTTAGTTG+AGG + chr3_1:63992013-63992032 Msa0367950:intron 30.0%
ACCTCAACTAAACAAAATCA+AGG - chr3_1:63992017-63992036 None:intergenic 30.0%
TATATATATGCAACTCAACG+AGG - chr3_1:63992505-63992524 None:intergenic 30.0%
TCTGGTGTGATAATTTAGTT+TGG + chr3_1:63992627-63992646 Msa0367950:intron 30.0%
AATTTATGGTTAACGACATC+TGG + chr3_1:63992702-63992721 Msa0367950:intron 30.0%
AATTGACAACAAAAAGAGGA+TGG - chr3_1:63992779-63992798 None:intergenic 30.0%
GGAAGAAAGTAATATTTCAC+CGG - chr3_1:63992849-63992868 None:intergenic 30.0%
AAATATTACTTTCTTCCCAC+AGG + chr3_1:63992852-63992871 Msa0367950:intron 30.0%
TCTGCTATCAATTCGAATAT+TGG - chr3_1:63993110-63993129 None:intergenic 30.0%
! AATATTCGAATTGATAGCAG+AGG + chr3_1:63993109-63993128 Msa0367950:CDS 30.0%
AATCTAACCTCATTTAAACG+AGG - chr3_1:63993157-63993176 None:intergenic 30.0%
TAAATGAGGTTAGATTCTGA+TGG + chr3_1:63993161-63993180 Msa0367950:intron 30.0%
ACAACACTCATAAGTACTTA+AGG - chr3_1:63993278-63993297 None:intergenic 30.0%
AGTAATCAGGTTAATATCAG+GGG - chr3_1:63993577-63993596 None:intergenic 30.0%
GCTAGTGATATAAAGTAATC+AGG - chr3_1:63993590-63993609 None:intergenic 30.0%
ACAATTTATTATGGGACTGA+AGG + chr3_1:63993665-63993684 Msa0367950:intron 30.0%
TGAATAACTACTCAGACAAT+TGG - chr3_1:63993736-63993755 None:intergenic 30.0%
AAAATGCTCACATATTCTTC+TGG - chr3_1:63993787-63993806 None:intergenic 30.0%
CATGATTCATGATCAATCAA+TGG - chr3_1:63993946-63993965 None:intergenic 30.0%
GGATACACATTCAACTAAAT+GGG + chr3_1:63994073-63994092 Msa0367950:intron 30.0%
GATACACATTCAACTAAATG+GGG + chr3_1:63994074-63994093 Msa0367950:intron 30.0%
ATACACATTCAACTAAATGG+GGG + chr3_1:63994075-63994094 Msa0367950:intron 30.0%
CCTATCATAAACCAAACAAT+GGG + chr3_1:63994485-63994504 Msa0367950:intron 30.0%
TCTTCCTAATGTCTAACAAA+TGG + chr3_1:63994515-63994534 Msa0367950:intron 30.0%
CTTCCTAATGTCTAACAAAT+GGG + chr3_1:63994516-63994535 Msa0367950:intron 30.0%
TTAGGAATTAGGAACATACT+TGG - chr3_1:63994542-63994561 None:intergenic 30.0%
GACTATAAATCAGTGTACAA+AGG - chr3_1:63994728-63994747 None:intergenic 30.0%
! TATCTCGCTATAGCATTTTA+AGG + chr3_1:63994762-63994781 Msa0367950:intron 30.0%
! ATCTCGCTATAGCATTTTAA+GGG + chr3_1:63994763-63994782 Msa0367950:intron 30.0%
!!! GCTATCTAGTTTTAACAACA+TGG + chr3_1:63994802-63994821 Msa0367950:intron 30.0%
GAGATTATTGAATGCTTGTT+TGG + chr3_1:63994898-63994917 Msa0367950:intron 30.0%
! TTGTCGTTGATAGAAATTTC+TGG + chr3_1:63995161-63995180 Msa0367950:intron 30.0%
CGTAAAATATTAATCCTCAC+TGG - chr3_1:63995350-63995369 None:intergenic 30.0%
TCAAACCATCATAACAAAAG+CGG - chr3_1:63995516-63995535 None:intergenic 30.0%
! TTTGTTATGATGGTTTGAAG+AGG + chr3_1:63995518-63995537 Msa0367950:CDS 30.0%
GTTAAACCAGAAGAAATTGT+TGG + chr3_1:63995640-63995659 Msa0367950:CDS 30.0%
GATATTCCAACAATTTCTTC+TGG - chr3_1:63995649-63995668 None:intergenic 30.0%
GAAGAAATTGTTGGAATATC+TGG + chr3_1:63995649-63995668 Msa0367950:CDS 30.0%
! GAAATCTTTTAGTGCAATCA+TGG - chr3_1:63995695-63995714 None:intergenic 30.0%
AAAAGATTTCTTAAACAGGC+TGG + chr3_1:63995705-63995724 Msa0367950:CDS 30.0%
AAAGATTTCTTAAACAGGCT+GGG + chr3_1:63995706-63995725 Msa0367950:CDS 30.0%
ATTATGAATACTAGCATTGC+TGG + chr3_1:63995793-63995812 Msa0367950:CDS 30.0%
! GGATTTCATAACTGTAGTTT+TGG + chr3_1:63995970-63995989 Msa0367950:intron 30.0%
ATTAATATCTGGTGTCTGTT+TGG + chr3_1:63996116-63996135 Msa0367950:intron 30.0%
TCATAGTTAAAATCAGTAGC+AGG - chr3_1:63996252-63996271 None:intergenic 30.0%
! AACTATGATAACGAACATCT+TGG + chr3_1:63996264-63996283 Msa0367950:CDS 30.0%
! TTTGGCATTTGAAATAGTCT+TGG - chr3_1:63996340-63996359 None:intergenic 30.0%
! AACAATGATAACAGGGTTTT+TGG - chr3_1:63996358-63996377 None:intergenic 30.0%
AAAAACCCTGTTATCATTGT+TGG + chr3_1:63996357-63996376 Msa0367950:CDS 30.0%
CATGGAGAAGTAATACATTA+AGG - chr3_1:63996479-63996498 None:intergenic 30.0%
!!! TTCAAGGCTTTTTTCAGATT+GGG - chr3_1:63996538-63996557 None:intergenic 30.0%
!!! ATTCAAGGCTTTTTTCAGAT+TGG - chr3_1:63996539-63996558 None:intergenic 30.0%
ATACAAACTTTGCAGATTCA+AGG - chr3_1:63996554-63996573 None:intergenic 30.0%
!! TAAACAACAAAAGCATCCTT+CGG - chr3_1:63996615-63996634 None:intergenic 30.0%
!!! GATGCTTTTGTTGTTTATCA+AGG + chr3_1:63996618-63996637 Msa0367950:CDS 30.0%
GGTACATATGAAAATACTGA+AGG + chr3_1:63996711-63996730 Msa0367950:CDS 30.0%
AATTATCTTCCAATCATCTC+TGG - chr3_1:63996781-63996800 None:intergenic 30.0%
GTTTACCCTATGATACAATT+GGG + chr3_1:63996829-63996848 Msa0367950:CDS 30.0%
TTTACCCTATGATACAATTG+GGG + chr3_1:63996830-63996849 Msa0367950:CDS 30.0%
TTACACCAGCAAAATACAAA+TGG - chr3_1:63997212-63997231 None:intergenic 30.0%
! ATTTTTGCCATGTACAATTC+GGG + chr3_1:63997249-63997268 Msa0367950:three_prime_UTR 30.0%
TGTCTCATAAAATGAAACCT+TGG + chr3_1:63997301-63997320 Msa0367950:three_prime_UTR 30.0%
AAGTGACTCATTTAACATCA+GGG - chr3_1:63997541-63997560 None:intergenic 30.0%
CACACATTCTGTAAAATATG+TGG - chr3_1:63997730-63997749 None:intergenic 30.0%
TCAATATTACATGCATTTCC+AGG + chr3_1:63998137-63998156 Msa0367950:intron 30.0%
CAATATTACATGCATTTCCA+GGG + chr3_1:63998138-63998157 Msa0367950:intron 30.0%
! CATTATCTGCTTCTTTTGTT+GGG - chr3_1:63998233-63998252 None:intergenic 30.0%
! ACATTATCTGCTTCTTTTGT+TGG - chr3_1:63998234-63998253 None:intergenic 30.0%
AAATGGTAACAAGAGATAGA+AGG + chr3_1:63998311-63998330 Msa0367950:intron 30.0%
! TTTATGAGAAAGAAGGGTGT+TGG - chr3_1:63990282-63990301 None:intergenic 35.0%
!! ATCCTTTCGGAATTTTAACG+GGG - chr3_1:63990554-63990573 None:intergenic 35.0%
TGAAGAACAGAGAATCCTTT+CGG - chr3_1:63990567-63990586 None:intergenic 35.0%
AAGATATTGCATTGGATGTG+TGG + chr3_1:63990904-63990923 Msa0367950:intron 35.0%
GTAATGCTAGACCATGATTT+AGG + chr3_1:63990926-63990945 Msa0367950:intron 35.0%
! TCTACCATCTTTTCTCCAAT+AGG - chr3_1:63991265-63991284 None:intergenic 35.0%
GAGAAAAGATGGTAGAAACT+CGG + chr3_1:63991269-63991288 Msa0367950:intron 35.0%
GACTTGTAGATTCTGCAATA+AGG + chr3_1:63991320-63991339 Msa0367950:intron 35.0%
GGATCTAGAGATTAATGAGT+TGG + chr3_1:63991423-63991442 Msa0367950:intron 35.0%
! TTGATGATTGCATTGTTGCT+TGG + chr3_1:63991583-63991602 Msa0367950:intron 35.0%
ATGTCAACTAGATGGTTACA+AGG - chr3_1:63991744-63991763 None:intergenic 35.0%
TCACAAATTGGGCAATCTAA+TGG - chr3_1:63992167-63992186 None:intergenic 35.0%
!! TCTGTGGTGGATAAAAATCT+TGG + chr3_1:63992266-63992285 Msa0367950:CDS 35.0%
GGATAAAAATCTTGGACCTT+TGG + chr3_1:63992274-63992293 Msa0367950:CDS 35.0%
!! CAACAAATTTCTAGCTTCCA+AGG - chr3_1:63992397-63992416 None:intergenic 35.0%
TTACAGTATGATAGTTTCCG+AGG + chr3_1:63992561-63992580 Msa0367950:intron 35.0%
TACAGTATGATAGTTTCCGA+GGG + chr3_1:63992562-63992581 Msa0367950:intron 35.0%
AAAACCCAACCTTCAACATT+TGG + chr3_1:63992750-63992769 Msa0367950:intron 35.0%
AAACCCAACCTTCAACATTT+GGG + chr3_1:63992751-63992770 Msa0367950:intron 35.0%
ATATTTCACCGGATCCATTA+AGG - chr3_1:63992838-63992857 None:intergenic 35.0%
!! AACCTTTTGCATTTAAAGCC+CGG + chr3_1:63993032-63993051 Msa0367950:CDS 35.0%
TATTCTTCAACTCCCAATTC+CGG - chr3_1:63993054-63993073 None:intergenic 35.0%
AACAGCATCAGTAACATCAA+TGG - chr3_1:63993083-63993102 None:intergenic 35.0%
ATTGATGTTACTGATGCTGT+TGG + chr3_1:63993082-63993101 Msa0367950:CDS 35.0%
CATTGTTCCTCGTTTAAATG+AGG + chr3_1:63993147-63993166 Msa0367950:CDS 35.0%
AACTCTTGCAAGAAAAACCA+TGG + chr3_1:63993250-63993269 Msa0367950:intron 35.0%
! CATAAGTACTTAAGGTACCA+TGG - chr3_1:63993270-63993289 None:intergenic 35.0%
CAATCTACACTCCAACTTAT+AGG + chr3_1:63993349-63993368 Msa0367950:intron 35.0%
!! AAGCATCGATTCCTATAAGT+TGG - chr3_1:63993363-63993382 None:intergenic 35.0%
AATCGATGCTTACCAAAAGT+TGG + chr3_1:63993372-63993391 Msa0367950:intron 35.0%
! AATTCACTGGTACCAACTTT+TGG - chr3_1:63993387-63993406 None:intergenic 35.0%
AAATCAAGGTCAGAATTCAC+TGG - chr3_1:63993400-63993419 None:intergenic 35.0%
TCAACTCGCTTATGTCATAA+TGG - chr3_1:63993473-63993492 None:intergenic 35.0%
ACATGTGTAATGTGTTTCAG+AGG - chr3_1:63993520-63993539 None:intergenic 35.0%
CACATTACACATGTTGTGTT+TGG + chr3_1:63993526-63993545 Msa0367950:intron 35.0%
! TAGCAATGATTGCATTGATG+TGG + chr3_1:63993606-63993625 Msa0367950:intron 35.0%
! AGCAATGATTGCATTGATGT+GGG + chr3_1:63993607-63993626 Msa0367950:intron 35.0%
TTTACAGACTGGTAAGCTAA+AGG - chr3_1:63993856-63993875 None:intergenic 35.0%
TTACCAGTCTGTAAATGCTA+TGG + chr3_1:63993861-63993880 Msa0367950:intron 35.0%
TACCAGTCTGTAAATGCTAT+GGG + chr3_1:63993862-63993881 Msa0367950:intron 35.0%
AGGGATAACAATTAAGAAGC+TGG + chr3_1:63993897-63993916 Msa0367950:intron 35.0%
CATGAATCATGAAGTAACCT+TGG + chr3_1:63993955-63993974 Msa0367950:intron 35.0%
! TGCACATTTTATACAGTCCA+AGG - chr3_1:63993975-63993994 None:intergenic 35.0%
TTGTGAAAAATTAGCATGGG+AGG - chr3_1:63994029-63994048 None:intergenic 35.0%
CGGATACACATTCAACTAAA+TGG + chr3_1:63994072-63994091 Msa0367950:intron 35.0%
TTCAACAATGGCTATGATAG+TGG + chr3_1:63994212-63994231 Msa0367950:intron 35.0%
! CTTGTTTCTTCACAACATGA+GGG - chr3_1:63994316-63994335 None:intergenic 35.0%
! ACTTGTTTCTTCACAACATG+AGG - chr3_1:63994317-63994336 None:intergenic 35.0%
! TGATGATGACGAAAATATGC+AGG + chr3_1:63994353-63994372 Msa0367950:intron 35.0%
! GATGATGACGAAAATATGCA+GGG + chr3_1:63994354-63994373 Msa0367950:intron 35.0%
! ATGATGACGAAAATATGCAG+GGG + chr3_1:63994355-63994374 Msa0367950:intron 35.0%
GCCTATCATAAACCAAACAA+TGG + chr3_1:63994484-63994503 Msa0367950:intron 35.0%
! CCCATTGTTTGGTTTATGAT+AGG - chr3_1:63994488-63994507 None:intergenic 35.0%
AAGATACTTGACCCATTGTT+TGG - chr3_1:63994499-63994518 None:intergenic 35.0%
TGTCTAACAAATGTTTACGG+CGG + chr3_1:63994562-63994581 Msa0367950:intron 35.0%
!! AAAACCCGCTTTTGTTATGA+TGG + chr3_1:63995508-63995527 Msa0367950:CDS 35.0%
CAAACCATCATAACAAAAGC+GGG - chr3_1:63995515-63995534 None:intergenic 35.0%
TTAAATGACCCTATGATTCG+TGG + chr3_1:63995547-63995566 Msa0367950:CDS 35.0%
AAGATTTCTTAAACAGGCTG+GGG + chr3_1:63995707-63995726 Msa0367950:CDS 35.0%
!! ACTAATGCTGATTTCAGATC+AGG + chr3_1:63995766-63995785 Msa0367950:CDS 35.0%
!! GCAATTTCAAGAAGTGTTTG+AGG - chr3_1:63996297-63996316 None:intergenic 35.0%
AACACTTCTTGAAATTGCTG+AGG + chr3_1:63996299-63996318 Msa0367950:CDS 35.0%
ACACTTCTTGAAATTGCTGA+GGG + chr3_1:63996300-63996319 Msa0367950:CDS 35.0%
TTGAAACCATCGCAAAACAA+GGG + chr3_1:63996427-63996446 Msa0367950:CDS 35.0%
!!! TCAAGGCTTTTTTCAGATTG+GGG - chr3_1:63996537-63996556 None:intergenic 35.0%
!! AAACAACAAAAGCATCCTTC+GGG - chr3_1:63996614-63996633 None:intergenic 35.0%
GTTGTTTATCAAGGTCATCA+TGG + chr3_1:63996627-63996646 Msa0367950:CDS 35.0%
CGTTTACCCTATGATACAAT+TGG + chr3_1:63996828-63996847 Msa0367950:CDS 35.0%
TTACCCTATGATACAATTGG+GGG + chr3_1:63996831-63996850 Msa0367950:CDS 35.0%
ATATGACTGATGCAATTACC+AGG + chr3_1:63996997-63997016 Msa0367950:CDS 35.0%
TATGACTGATGCAATTACCA+GGG + chr3_1:63996998-63997017 Msa0367950:CDS 35.0%
! GTTTCGTGTTTTTCTTTTCC+TGG + chr3_1:63997109-63997128 Msa0367950:three_prime_UTR 35.0%
CCAGCAAAATACAAATGGAA+TGG - chr3_1:63997207-63997226 None:intergenic 35.0%
! CCATTCCATTTGTATTTTGC+TGG + chr3_1:63997204-63997223 Msa0367950:three_prime_UTR 35.0%
GGGACATAAAAACTTCATTC+AGG + chr3_1:63997456-63997475 Msa0367950:three_prime_UTR 35.0%
GTTGCAAGTAATAATGAGAC+AGG - chr3_1:63997493-63997512 None:intergenic 35.0%
GAAGTGACTCATTTAACATC+AGG - chr3_1:63997542-63997561 None:intergenic 35.0%
!! TCGAAATCAAGCATTTTGAC+GGG - chr3_1:63997621-63997640 None:intergenic 35.0%
! GTCGAAATCAAGCATTTTGA+CGG - chr3_1:63997622-63997641 None:intergenic 35.0%
! GCTGACAAATTTGAGCTTTT+GGG - chr3_1:63997805-63997824 None:intergenic 35.0%
! TGCTGACAAATTTGAGCTTT+TGG - chr3_1:63997806-63997825 None:intergenic 35.0%
AAAAGCTCAAATTTGTCAGC+AGG + chr3_1:63997805-63997824 Msa0367950:three_prime_UTR 35.0%
ACTCACAAACAGTAATTGAC+AGG - chr3_1:63998009-63998028 None:intergenic 35.0%
CTTATGAAACTTATGAACCC+TGG - chr3_1:63998158-63998177 None:intergenic 35.0%
ATAGAAGGAAAGTAACTCAC+CGG + chr3_1:63998326-63998345 Msa0367950:intron 35.0%
TGATTGAATCAAAATGGGGC+TGG + chr3_1:63990314-63990333 Msa0367950:exon 40.0%
GATTGAATCAAAATGGGGCT+GGG + chr3_1:63990315-63990334 Msa0367950:exon 40.0%
AAAACCTCAATAGCGTCATC+GGG - chr3_1:63990519-63990538 None:intergenic 40.0%
GAAAACCTCAATAGCGTCAT+CGG - chr3_1:63990520-63990539 None:intergenic 40.0%
TACCCCGTTAAAATTCCGAA+AGG + chr3_1:63990549-63990568 Msa0367950:CDS 40.0%
CATACGACAATTTCCAGCAA+TGG - chr3_1:63990646-63990665 None:intergenic 40.0%
! TTGTCGTATGTGTCTTGTTG+AGG + chr3_1:63990656-63990675 Msa0367950:CDS 40.0%
AAGAATCTAACCAGGAAGAG+CGG - chr3_1:63990721-63990740 None:intergenic 40.0%
GTTGTGTGTAAATGGAGTGT+TGG + chr3_1:63990837-63990856 Msa0367950:intron 40.0%
!! TGTGTAAATGGAGTGTTGGA+TGG + chr3_1:63990841-63990860 Msa0367950:intron 40.0%
TGGATGGTAAAGAACAACAC+CGG + chr3_1:63990857-63990876 Msa0367950:intron 40.0%
AACAAACGCACCCTAAATCA+TGG - chr3_1:63990940-63990959 None:intergenic 40.0%
! ACCATCTTTTCTCCAATAGG+TGG - chr3_1:63991262-63991281 None:intergenic 40.0%
AAACTCGGCATATGTGGTTT+GGG + chr3_1:63991284-63991303 Msa0367950:intron 40.0%
! AAGGAGAGTATATCAGATGG+AGG + chr3_1:63991339-63991358 Msa0367950:intron 40.0%
TGGCTACATGTATCAAACAC+CGG - chr3_1:63991480-63991499 None:intergenic 40.0%
CTTATTCCACTAAGTGTGGT+TGG - chr3_1:63991500-63991519 None:intergenic 40.0%
CAACCACACTTAGTGGAATA+AGG + chr3_1:63991498-63991517 Msa0367950:intron 40.0%
!! AAGCCTTATTCCACTAAGTG+TGG - chr3_1:63991504-63991523 None:intergenic 40.0%
AGATTGCCCAATTTGTGATC+AGG + chr3_1:63992169-63992188 Msa0367950:CDS 40.0%
GATTGCCCAATTTGTGATCA+GGG + chr3_1:63992170-63992189 Msa0367950:CDS 40.0%
TGATCTTCAGGATCAGTCAA+TGG + chr3_1:63992202-63992221 Msa0367950:CDS 40.0%
CACTGATATGAAGAGATCTG+TGG + chr3_1:63992250-63992269 Msa0367950:CDS 40.0%
TGATATGAAGAGATCTGTGG+TGG + chr3_1:63992253-63992272 Msa0367950:CDS 40.0%
GTCATCACAGTCTTTACCAA+AGG - chr3_1:63992293-63992312 None:intergenic 40.0%
TGGTAAAGACTGTGATGACA+CGG + chr3_1:63992294-63992313 Msa0367950:CDS 40.0%
ATAGTTTCCGAGGGAACTTA+CGG + chr3_1:63992571-63992590 Msa0367950:intron 40.0%
TAACGACATCTGGTAGCAAT+AGG + chr3_1:63992712-63992731 Msa0367950:intron 40.0%
! TCTGAGTTCCTTAATGGATC+CGG + chr3_1:63992827-63992846 Msa0367950:intron 40.0%
GTAATAGATATCTGCCCTGT+AGG + chr3_1:63992995-63993014 Msa0367950:CDS 40.0%
!! TTCCGGGCTTTAAATGCAAA+AGG - chr3_1:63993037-63993056 None:intergenic 40.0%
! TTGCATTTAAAGCCCGGAAT+TGG + chr3_1:63993038-63993057 Msa0367950:CDS 40.0%
! TGCATTTAAAGCCCGGAATT+GGG + chr3_1:63993039-63993058 Msa0367950:CDS 40.0%
ATTCTTCAACTCCCAATTCC+GGG - chr3_1:63993053-63993072 None:intergenic 40.0%
CCACAAGAAAACTGAAGCTT+TGG - chr3_1:63993215-63993234 None:intergenic 40.0%
! CCAAAGCTTCAGTTTTCTTG+TGG + chr3_1:63993212-63993231 Msa0367950:intron 40.0%
GATCTCAAGCCTTTGGTTAT+GGG + chr3_1:63993813-63993832 Msa0367950:intron 40.0%
ACCAGTCTGTAAATGCTATG+GGG + chr3_1:63993863-63993882 Msa0367950:intron 40.0%
CTATGGGGATGAGTATTTGA+GGG + chr3_1:63993878-63993897 Msa0367950:intron 40.0%
CTTTCAATAGCGTGCTATAG+CGG + chr3_1:63994136-63994155 Msa0367950:intron 40.0%
! TGGCCCATTTGTTAGACATT+AGG - chr3_1:63994522-63994541 None:intergenic 40.0%
!!! GATATTTTGGCGGTAACAAG+GGG - chr3_1:63994832-63994851 None:intergenic 40.0%
!!! CGATATTTTGGCGGTAACAA+GGG - chr3_1:63994833-63994852 None:intergenic 40.0%
!!! TCGATATTTTGGCGGTAACA+AGG - chr3_1:63994834-63994853 None:intergenic 40.0%
AATTCGTGACGTTGTGTACA+GGG - chr3_1:63995246-63995265 None:intergenic 40.0%
AAATTCGTGACGTTGTGTAC+AGG - chr3_1:63995247-63995266 None:intergenic 40.0%
! CTTCAAATCCCTGTGTTTTG+CGG + chr3_1:63995291-63995310 Msa0367950:intron 40.0%
! TTCAAATCCCTGTGTTTTGC+GGG + chr3_1:63995292-63995311 Msa0367950:intron 40.0%
CAACTAGTTAAGTTCCAGTG+AGG + chr3_1:63995333-63995352 Msa0367950:intron 40.0%
GATGCGATTTAGTGTTCTCT+GGG + chr3_1:63995369-63995388 Msa0367950:intron 40.0%
ATGCGATTTAGTGTTCTCTG+GGG + chr3_1:63995370-63995389 Msa0367950:intron 40.0%
GCTTAATTTAGCAGAAGGGA+TGG + chr3_1:63995409-63995428 Msa0367950:intron 40.0%
CTTCGTTTATGTCCTGCAAT+GGG - chr3_1:63995474-63995493 None:intergenic 40.0%
TCTTCGTTTATGTCCTGCAA+TGG - chr3_1:63995475-63995494 None:intergenic 40.0%
AACCTCTGCTACCAAAGAAA+GGG - chr3_1:63995611-63995630 None:intergenic 40.0%
GCTGGGGTCAAATAATGTAT+GGG + chr3_1:63995723-63995742 Msa0367950:CDS 40.0%
CTGGGGTCAAATAATGTATG+GGG + chr3_1:63995724-63995743 Msa0367950:CDS 40.0%
TCAAATAATGTATGGGGCGA+AGG + chr3_1:63995730-63995749 Msa0367950:CDS 40.0%
!! CGATTCCTTTTTAGCCCTTT+GGG + chr3_1:63995939-63995958 Msa0367950:intron 40.0%
AAATCCAGTGCAATCCCAAA+GGG - chr3_1:63995956-63995975 None:intergenic 40.0%
TAGAATACGCAAGACTGTCA+CGG + chr3_1:63996197-63996216 Msa0367950:CDS 40.0%
GATAACGAACATCTTGGTAC+TGG + chr3_1:63996270-63996289 Msa0367950:CDS 40.0%
CAGCACCAACAATGATAACA+GGG - chr3_1:63996365-63996384 None:intergenic 40.0%
! CTGTTATCATTGTTGGTGCT+GGG + chr3_1:63996364-63996383 Msa0367950:CDS 40.0%
!! GATTTTTGAGAGGAAGGATC+AGG + chr3_1:63996386-63996405 Msa0367950:CDS 40.0%
GTTGAAACCATCGCAAAACA+AGG + chr3_1:63996426-63996445 Msa0367950:CDS 40.0%
!!! GATATTCCCTTGTTTTGCGA+TGG - chr3_1:63996436-63996455 None:intergenic 40.0%
GGAATATCGTCAGATCTGAT+TGG + chr3_1:63996448-63996467 Msa0367950:CDS 40.0%
ATCGTCAGATCTGATTGGAA+TGG + chr3_1:63996453-63996472 Msa0367950:CDS 40.0%
ACTCCCCCAATTGTATCATA+GGG - chr3_1:63996837-63996856 None:intergenic 40.0%
AACTCCCCCAATTGTATCAT+AGG - chr3_1:63996838-63996857 None:intergenic 40.0%
! TACCAGGGCATCAAAGATAA+TGG + chr3_1:63997013-63997032 Msa0367950:CDS 40.0%
TATGTCCCTCAACACATTTG+TGG - chr3_1:63997444-63997463 None:intergenic 40.0%
!! GCATTTTGACGGGAAGAATT+GGG - chr3_1:63997611-63997630 None:intergenic 40.0%
!! AGCATTTTGACGGGAAGAAT+TGG - chr3_1:63997612-63997631 None:intergenic 40.0%
! TAAGAGTGTAAGGTGGAAAG+TGG - chr3_1:63997908-63997927 None:intergenic 40.0%
TCCACCTTACACTCTTACAA+TGG + chr3_1:63997911-63997930 Msa0367950:three_prime_UTR 40.0%
TGAAATGGAAGCTGAAAGAG+TGG - chr3_1:63997953-63997972 None:intergenic 40.0%
AACAGTAATTGACAGGAGCT+AGG - chr3_1:63998002-63998021 None:intergenic 40.0%
CATGCATAGAGATGCTATCA+AGG + chr3_1:63998033-63998052 Msa0367950:intron 40.0%
! CTTCTTTTGTTGGGTGTATG+AGG - chr3_1:63998224-63998243 None:intergenic 40.0%
GAACTATTAGATGAGGTCTG+AGG + chr3_1:63998391-63998410 Msa0367950:three_prime_UTR 40.0%
AAAAGATGGGAGAGTGAGGT+GGG - chr3_1:63990234-63990253 None:intergenic 45.0%
TGAGAAAAGATGGGAGAGTG+AGG - chr3_1:63990238-63990257 None:intergenic 45.0%
!! AAGGGTGTTGGATCGAAGAT+GGG - chr3_1:63990270-63990289 None:intergenic 45.0%
GTTTGGTTGTGATTGAACGG+AGG - chr3_1:63990389-63990408 None:intergenic 45.0%
! CGGGTTTGGTTGTGATTGAA+CGG - chr3_1:63990392-63990411 None:intergenic 45.0%
TCAATAGCGTCATCGGGATT+GGG - chr3_1:63990513-63990532 None:intergenic 45.0%
! GCTATTGAGGTTTTCGTCGA+TGG + chr3_1:63990525-63990544 Msa0367950:CDS 45.0%
CATAGCAGACTTTCCATTGC+TGG + chr3_1:63990630-63990649 Msa0367950:CDS 45.0%
AGAATCTAACCAGGAAGAGC+GGG - chr3_1:63990720-63990739 None:intergenic 45.0%
GCCACCTATTGGAGAAAAGA+TGG + chr3_1:63991258-63991277 Msa0367950:intron 45.0%
TGGTAGAAACTCGGCATATG+TGG + chr3_1:63991278-63991297 Msa0367950:intron 45.0%
GAAACTCGGCATATGTGGTT+TGG + chr3_1:63991283-63991302 Msa0367950:intron 45.0%
GAGGATAGTCAGATCACTAG+AGG + chr3_1:63991358-63991377 Msa0367950:intron 45.0%
AGTCAGATCACTAGAGGTAG+AGG + chr3_1:63991364-63991383 Msa0367950:intron 45.0%
ATGTAGCCAACCACACTTAG+TGG + chr3_1:63991491-63991510 Msa0367950:intron 45.0%
TCTCGTGCTTTCTTGGCTAT+AGG - chr3_1:63992113-63992132 None:intergenic 45.0%
! ATAGCCAAGAAAGCACGAGA+AGG + chr3_1:63992113-63992132 Msa0367950:CDS 45.0%
CTCCACCCTGATCACAAATT+GGG - chr3_1:63992178-63992197 None:intergenic 45.0%
TCTCCACCCTGATCACAAAT+TGG - chr3_1:63992179-63992198 None:intergenic 45.0%
CAGGATCAGTCAATGGCATT+TGG + chr3_1:63992209-63992228 Msa0367950:CDS 45.0%
CACGGTGCATTCAATGTACA+AGG + chr3_1:63992312-63992331 Msa0367950:CDS 45.0%
TAGTTTCCGAGGGAACTTAC+GGG + chr3_1:63992572-63992591 Msa0367950:intron 45.0%
CATCTGGTAGCAATAGGTGT+TGG + chr3_1:63992718-63992737 Msa0367950:intron 45.0%
GCTCCCAAATGTTGAAGGTT+GGG - chr3_1:63992757-63992776 None:intergenic 45.0%
TGCGAATCTAACACACCTGT+GGG - chr3_1:63992870-63992889 None:intergenic 45.0%
ATGCGAATCTAACACACCTG+TGG - chr3_1:63992871-63992890 None:intergenic 45.0%
GTGTGTTAGATTCGCATCAG+AGG + chr3_1:63992874-63992893 Msa0367950:CDS 45.0%
GTTCAGGATCTTGGCATGTT+AGG + chr3_1:63992905-63992924 Msa0367950:CDS 45.0%
CTCATGACAAGTGAACTCTC+TGG + chr3_1:63992968-63992987 Msa0367950:CDS 45.0%
TTGAAGTGAGTGCTCCTACA+GGG - chr3_1:63993012-63993031 None:intergenic 45.0%
! TTTGAAGTGAGTGCTCCTAC+AGG - chr3_1:63993013-63993032 None:intergenic 45.0%
TACTTGCGATCTCAAGCCTT+TGG + chr3_1:63993806-63993825 Msa0367950:intron 45.0%
CGATCTCAAGCCTTTGGTTA+TGG + chr3_1:63993812-63993831 Msa0367950:intron 45.0%
ACGCAATTGCCCATAACCAA+AGG - chr3_1:63993825-63993844 None:intergenic 45.0%
GGTTATGGGCAATTGCGTTA+AGG + chr3_1:63993827-63993846 Msa0367950:intron 45.0%
TCCCCATAGCATTTACAGAC+TGG - chr3_1:63993867-63993886 None:intergenic 45.0%
GCTATGGGGATGAGTATTTG+AGG + chr3_1:63993877-63993896 Msa0367950:intron 45.0%
! GAAGCACCATTGCAGGAAAA+TGG - chr3_1:63994195-63994214 None:intergenic 45.0%
! CATTGTTGAAGCACCATTGC+AGG - chr3_1:63994202-63994221 None:intergenic 45.0%
CTGCAATGGTGCTTCAACAA+TGG + chr3_1:63994200-63994219 Msa0367950:intron 45.0%
!! ATGATAGTGGCCGCAAATAG+CGG + chr3_1:63994225-63994244 Msa0367950:intron 45.0%
GTTTCTTCACAACATGAGGG+TGG - chr3_1:63994313-63994332 None:intergenic 45.0%
TGACTGATGTAGTGTTGCAG+AGG + chr3_1:63994383-63994402 Msa0367950:intron 45.0%
GACTTGGGAATCTATGCACA+TGG - chr3_1:63995223-63995242 None:intergenic 45.0%
ATTCGTGACGTTGTGTACAG+GGG - chr3_1:63995245-63995264 None:intergenic 45.0%
! TCAAATCCCTGTGTTTTGCG+GGG + chr3_1:63995293-63995312 Msa0367950:intron 45.0%
TTGATTCCCCGCAAAACACA+GGG - chr3_1:63995302-63995321 None:intergenic 45.0%
CGATGCGATTTAGTGTTCTC+TGG + chr3_1:63995368-63995387 Msa0367950:intron 45.0%
TTGTTCCACTTTCCCATTGC+AGG + chr3_1:63995459-63995478 Msa0367950:intron 45.0%
TATGTCCTGCAATGGGAAAG+TGG - chr3_1:63995467-63995486 None:intergenic 45.0%
TGCAGGACATAAACGAAGAG+TGG + chr3_1:63995476-63995495 Msa0367950:intron 45.0%
ATGATGGTTTGAAGAGGCAG+AGG + chr3_1:63995524-63995543 Msa0367950:CDS 45.0%
CATCAGGACCACGAATCATA+GGG - chr3_1:63995558-63995577 None:intergenic 45.0%
CAACCTCTGCTACCAAAGAA+AGG - chr3_1:63995612-63995631 None:intergenic 45.0%
GGCTGGGGTCAAATAATGTA+TGG + chr3_1:63995722-63995741 Msa0367950:CDS 45.0%
AATGTATGGGGCGAAGGAAT+TGG + chr3_1:63995736-63995755 Msa0367950:CDS 45.0%
GAAAGCAGATGCTTTCCTGT+TGG + chr3_1:63995822-63995841 Msa0367950:CDS 45.0%
!! GCGATTCCTTTTTAGCCCTT+TGG + chr3_1:63995938-63995957 Msa0367950:intron 45.0%
GCAATCCCAAAGGGCTAAAA+AGG - chr3_1:63995947-63995966 None:intergenic 45.0%
GAAATCCAGTGCAATCCCAA+AGG - chr3_1:63995957-63995976 None:intergenic 45.0%
CACTTCCAAATTTGCAGCCA+CGG + chr3_1:63996151-63996170 Msa0367950:intron 45.0%
ACTTCCAAATTTGCAGCCAC+GGG + chr3_1:63996152-63996171 Msa0367950:intron 45.0%
AAGCCAAGGTCGGTTACATT+GGG + chr3_1:63996226-63996245 Msa0367950:CDS 45.0%
CCAGCACCAACAATGATAAC+AGG - chr3_1:63996366-63996385 None:intergenic 45.0%
CCTGTTATCATTGTTGGTGC+TGG + chr3_1:63996363-63996382 Msa0367950:CDS 45.0%
!!! TTGGTGCTGGGATTTTTGAG+AGG + chr3_1:63996376-63996395 Msa0367950:CDS 45.0%
!! TGCTGGGATTTTTGAGAGGA+AGG + chr3_1:63996380-63996399 Msa0367950:CDS 45.0%
GGGAGCTGATGATACAAACT+TGG + chr3_1:63996581-63996600 Msa0367950:CDS 45.0%
AAACTTGGACAAGATCCCGA+AGG + chr3_1:63996596-63996615 Msa0367950:CDS 45.0%
AAGGATGCACACAGCAAACA+TGG + chr3_1:63996730-63996749 Msa0367950:CDS 45.0%
TTGGAGACTCCAGAGATGAT+TGG + chr3_1:63996769-63996788 Msa0367950:CDS 45.0%
!! AAGGTTGGTCTCAGTGAAGA+TGG - chr3_1:63996927-63996946 None:intergenic 45.0%
GAGACCAACCTTCACTAAGA+AGG + chr3_1:63996935-63996954 Msa0367950:CDS 45.0%
ACCAACCTTCACTAAGAAGG+TGG + chr3_1:63996938-63996957 Msa0367950:CDS 45.0%
TCCACCTTCTTAGTGAAGGT+TGG - chr3_1:63996942-63996961 None:intergenic 45.0%
TGGATCCACCTTCTTAGTGA+AGG - chr3_1:63996946-63996965 None:intergenic 45.0%
AAGGTGGATCCATCACCATT+CGG + chr3_1:63996954-63996973 Msa0367950:CDS 45.0%
AGCCATTATCTTTGATGCCC+TGG - chr3_1:63997018-63997037 None:intergenic 45.0%
GGACTAACCCGAATTGTACA+TGG - chr3_1:63997259-63997278 None:intergenic 45.0%
TTGGATTGCACATGCTTCCA+AGG - chr3_1:63997321-63997340 None:intergenic 45.0%
!! GGTGCTGCTTCATATACTCT+AGG - chr3_1:63997423-63997442 None:intergenic 45.0%
CAGCACCACAAATGTGTTGA+GGG + chr3_1:63997436-63997455 Msa0367950:three_prime_UTR 45.0%
!! TCATTCAGGTGTGTTGACTC+TGG - chr3_1:63997658-63997677 None:intergenic 45.0%
ATGGGGTTGCAGTTTCATTC+AGG - chr3_1:63997672-63997691 None:intergenic 45.0%
AATGAAACTGCAACCCCATC+TGG + chr3_1:63997673-63997692 Msa0367950:three_prime_UTR 45.0%
ATGAAACTGCAACCCCATCT+GGG + chr3_1:63997674-63997693 Msa0367950:three_prime_UTR 45.0%
! GCCATTGTAAGAGTGTAAGG+TGG - chr3_1:63997915-63997934 None:intergenic 45.0%
! GCTGCCATTGTAAGAGTGTA+AGG - chr3_1:63997918-63997937 None:intergenic 45.0%
CGGTGTTCATACTTGAGACA+TGG + chr3_1:63998102-63998121 Msa0367950:intron 45.0%
AAGGAAAGTAACTCACCGGA+TGG + chr3_1:63998330-63998349 Msa0367950:intron 45.0%
!!! TTAAAAAAATCATTTTTTAT+GGG + chr3_1:63991121-63991140 Msa0367950:intron 5.0%
!! TATATATATATTAAATTAAG+TGG + chr3_1:63992529-63992548 Msa0367950:intron 5.0%
GAAAAGATGGGAGAGTGAGG+TGG - chr3_1:63990235-63990254 None:intergenic 50.0%
!! GAAGGGTGTTGGATCGAAGA+TGG - chr3_1:63990271-63990290 None:intergenic 50.0%
TTGTGATTGAACGGAGGAGG+AGG - chr3_1:63990383-63990402 None:intergenic 50.0%
TGGTTGTGATTGAACGGAGG+AGG - chr3_1:63990386-63990405 None:intergenic 50.0%
AGATCGACGAGAGGTTGTTC+GGG - chr3_1:63990450-63990469 None:intergenic 50.0%
GAGATCGACGAGAGGTTGTT+CGG - chr3_1:63990451-63990470 None:intergenic 50.0%
CAATAGCGTCATCGGGATTG+GGG - chr3_1:63990512-63990531 None:intergenic 50.0%
CTCAATAGCGTCATCGGGAT+TGG - chr3_1:63990514-63990533 None:intergenic 50.0%
CAATCCCGATGACGCTATTG+AGG + chr3_1:63990512-63990531 Msa0367950:CDS 50.0%
CTCTGTTCTTCAAGCGTGTG+AGG + chr3_1:63990575-63990594 Msa0367950:CDS 50.0%
CACTCCTTCTCGTGCTTTCT+TGG - chr3_1:63992120-63992139 None:intergenic 50.0%
! GAAAGCACGAGAAGGAGTGA+TGG + chr3_1:63992121-63992140 Msa0367950:CDS 50.0%
TGCCCAATTTGTGATCAGGG+TGG + chr3_1:63992173-63992192 Msa0367950:CDS 50.0%
!! ATGGCATTTGGCTCTGATCG+TGG + chr3_1:63992221-63992240 Msa0367950:CDS 50.0%
AGTTGACCCGTAAGTTCCCT+CGG - chr3_1:63992581-63992600 None:intergenic 50.0%
ACTTGCTCTCATGTCAGCTC+AGG + chr3_1:63992661-63992680 Msa0367950:intron 50.0%
CTTGCTCTCATGTCAGCTCA+GGG + chr3_1:63992662-63992681 Msa0367950:intron 50.0%
GGCTCCCAAATGTTGAAGGT+TGG - chr3_1:63992758-63992777 None:intergenic 50.0%
GGATGGCTCCCAAATGTTGA+AGG - chr3_1:63992762-63992781 None:intergenic 50.0%
AGATTCGCATCAGAGGTTGC+AGG + chr3_1:63992881-63992900 Msa0367950:CDS 50.0%
GATTCGCATCAGAGGTTGCA+GGG + chr3_1:63992882-63992901 Msa0367950:CDS 50.0%
ATTCGCATCAGAGGTTGCAG+GGG + chr3_1:63992883-63992902 Msa0367950:CDS 50.0%
GATCTTGGCATGTTAGGTCG+TGG + chr3_1:63992911-63992930 Msa0367950:CDS 50.0%
!! CGTGGTAGTGGAGAAGAGAT+TGG + chr3_1:63992929-63992948 Msa0367950:CDS 50.0%
GGAACAATGCGCATGACTTC+AGG - chr3_1:63993136-63993155 None:intergenic 50.0%
AAGATAGGGTCGCAGTGAAC+AGG + chr3_1:63994047-63994066 Msa0367950:intron 50.0%
AGATAGGGTCGCAGTGAACA+GGG + chr3_1:63994048-63994067 Msa0367950:intron 50.0%
TGCAGGAAAATGGCTTCGCA+GGG - chr3_1:63994185-63994204 None:intergenic 50.0%
TTGCAGGAAAATGGCTTCGC+AGG - chr3_1:63994186-63994205 None:intergenic 50.0%
!! GCGAAGCCATTTTCCTGCAA+TGG + chr3_1:63994186-63994205 Msa0367950:intron 50.0%
CGTGTTTCCACCGCTATTTG+CGG - chr3_1:63994238-63994257 None:intergenic 50.0%
GTGGAAACACGACTCAATCG+CGG + chr3_1:63994247-63994266 Msa0367950:intron 50.0%
TGGAAACACGACTCAATCGC+GGG + chr3_1:63994248-63994267 Msa0367950:intron 50.0%
GACGAAAATATGCAGGGGCA+CGG + chr3_1:63994360-63994379 Msa0367950:intron 50.0%
!!! AGTGTTGCAGAGGTGCCTTT+TGG + chr3_1:63994393-63994412 Msa0367950:intron 50.0%
! GAAATTTCTGGATCCGTCCC+TGG + chr3_1:63995173-63995192 Msa0367950:intron 50.0%
ACGTTGTGTACAGGGGACTT+GGG - chr3_1:63995238-63995257 None:intergenic 50.0%
! GTTGATTCCCCGCAAAACAC+AGG - chr3_1:63995303-63995322 None:intergenic 50.0%
CCATCAGGACCACGAATCAT+AGG - chr3_1:63995559-63995578 None:intergenic 50.0%
CCTATGATTCGTGGTCCTGA+TGG + chr3_1:63995556-63995575 Msa0367950:CDS 50.0%
GCCAGTTCACAGGCTTAAAG+CGG - chr3_1:63995582-63995601 None:intergenic 50.0%
! AGCCCTTTCTTTGGTAGCAG+AGG + chr3_1:63995606-63995625 Msa0367950:CDS 50.0%
GCAGATGCTTTCCTGTTGGT+TGG + chr3_1:63995826-63995845 Msa0367950:CDS 50.0%
!! TTAGCCCTTTGGGATTGCAC+TGG + chr3_1:63995949-63995968 Msa0367950:intron 50.0%
CAATGTAACCGACCTTGGCT+TGG - chr3_1:63996227-63996246 None:intergenic 50.0%
CAAGCCAAGGTCGGTTACAT+TGG + chr3_1:63996225-63996244 Msa0367950:CDS 50.0%
ATTACTTCTCCATGCTGCCC+AGG + chr3_1:63996485-63996504 Msa0367950:CDS 50.0%
TTCTCACTGAATGCAGCTGC+TGG - chr3_1:63996687-63996706 None:intergenic 50.0%
AGCAGCTGCATTCAGTGAGA+AGG + chr3_1:63996686-63996705 Msa0367950:CDS 50.0%
GCTGCATTCAGTGAGAAGGA+AGG + chr3_1:63996690-63996709 Msa0367950:CDS 50.0%
TCTCCAACTGTTGGAACTGC+AGG - chr3_1:63996756-63996775 None:intergenic 50.0%
!! TCTCTGGAGTCTCCAACTGT+TGG - chr3_1:63996765-63996784 None:intergenic 50.0%
TAAACGCACCCCTGCTATCT+CGG - chr3_1:63996814-63996833 None:intergenic 50.0%
TCGTCCATTTGCGCAAGGTT+TGG - chr3_1:63996885-63996904 None:intergenic 50.0%
AGTGAAGATGGCAATGCAGC+TGG - chr3_1:63996915-63996934 None:intergenic 50.0%
AGGTGGATCCATCACCATTC+GGG + chr3_1:63996955-63996974 Msa0367950:CDS 50.0%
TCCATCACCATTCGGGATTG+CGG + chr3_1:63996962-63996981 Msa0367950:CDS 50.0%
TTCTCAACCGCAATCCCGAA+TGG - chr3_1:63996972-63996991 None:intergenic 50.0%
CTTGCTTGCGGAAAGCTTCT+CGG + chr3_1:63997143-63997162 Msa0367950:three_prime_UTR 50.0%
GCAGCACCACAAATGTGTTG+AGG + chr3_1:63997435-63997454 Msa0367950:three_prime_UTR 50.0%
ATCCACGCTCAAACCCAGAT+GGG - chr3_1:63997690-63997709 None:intergenic 50.0%
TATCCACGCTCAAACCCAGA+TGG - chr3_1:63997691-63997710 None:intergenic 50.0%
TCCTTCCAGTGTGGTGGTAT+GGG - chr3_1:63997881-63997900 None:intergenic 50.0%
GAAAGAGTGGTGCATACAGG+AGG - chr3_1:63997940-63997959 None:intergenic 50.0%
GCTGAAAGAGTGGTGCATAC+AGG - chr3_1:63997943-63997962 None:intergenic 50.0%
ACTCACCGGATGGAATGAGA+TGG + chr3_1:63998340-63998359 Msa0367950:intron 50.0%
CTCACCGGATGGAATGAGAT+GGG + chr3_1:63998341-63998360 Msa0367950:intron 50.0%
TCACCGGATGGAATGAGATG+GGG + chr3_1:63998342-63998361 Msa0367950:intron 50.0%
TGAGATGGGGCGGTAGAAAT+CGG + chr3_1:63998355-63998374 Msa0367950:three_prime_UTR 50.0%
AGGTGGGAGGTGAAGGAAGA+AGG - chr3_1:63990218-63990237 None:intergenic 55.0%
TGATTGAACGGAGGAGGAGG+AGG - chr3_1:63990380-63990399 None:intergenic 55.0%
! GGGTTTGCGAAGTTCGGGTT+TGG - chr3_1:63990406-63990425 None:intergenic 55.0%
!! TTGTTCGGGTTGGGGTTGTG+CGG - chr3_1:63990436-63990455 None:intergenic 55.0%
!! ACGAGAGGTTGTTCGGGTTG+GGG - chr3_1:63990444-63990463 None:intergenic 55.0%
! GACGAGAGGTTGTTCGGGTT+GGG - chr3_1:63990445-63990464 None:intergenic 55.0%
CGTCATCGGGATTGGGGAAA+TGG - chr3_1:63990506-63990525 None:intergenic 55.0%
CTTCAAGCGTGTGAGGTTGC+TGG + chr3_1:63990582-63990601 Msa0367950:CDS 55.0%
GCGCAAGAAGCAACAGGCTT+AGG - chr3_1:63990693-63990712 None:intergenic 55.0%
GAGTTGGGGTAGCCACCTAT+TGG + chr3_1:63991247-63991266 Msa0367950:intron 55.0%
! GGGTGGAGAGTGTGATCTTC+AGG + chr3_1:63992190-63992209 Msa0367950:CDS 55.0%
ATCAGAGGTTGCAGGGGTTC+AGG + chr3_1:63992889-63992908 Msa0367950:CDS 55.0%
GTTGCAGGGGTTCAGGATCT+TGG + chr3_1:63992896-63992915 Msa0367950:CDS 55.0%
GGCATGTTAGGTCGTGGTAG+TGG + chr3_1:63992917-63992936 Msa0367950:CDS 55.0%
! CGTGCTATAGCGGAATAGCG+TGG + chr3_1:63994146-63994165 Msa0367950:intron 55.0%
! ATAGCGGAATAGCGTGGCGA+AGG + chr3_1:63994152-63994171 Msa0367950:intron 55.0%
GCAGGAAAATGGCTTCGCAG+GGG - chr3_1:63994184-63994203 None:intergenic 55.0%
ATAGTGGCCGCAAATAGCGG+TGG + chr3_1:63994228-63994247 Msa0367950:intron 55.0%
TGAGGGTGGTAGCCGGAAAA+CGG - chr3_1:63994299-63994318 None:intergenic 55.0%
CACAACATGAGGGTGGTAGC+CGG - chr3_1:63994306-63994325 None:intergenic 55.0%
TCTCCCAAGTCTCACTGCCA+GGG - chr3_1:63995193-63995212 None:intergenic 55.0%
GACGTTGTGTACAGGGGACT+TGG - chr3_1:63995239-63995258 None:intergenic 55.0%
ACAGGCTTAAAGCGGCCATC+AGG - chr3_1:63995574-63995593 None:intergenic 55.0%
! GCCGCTTTAAGCCTGTGAAC+TGG + chr3_1:63995578-63995597 Msa0367950:CDS 55.0%
CTGGCGTGAAGCCCTTTCTT+TGG + chr3_1:63995597-63995616 Msa0367950:CDS 55.0%
! TTTCCTGTTGGTTGGCACCC+AGG + chr3_1:63995834-63995853 Msa0367950:CDS 55.0%
ATACCTGGGTGCCAACCAAC+AGG - chr3_1:63995840-63995859 None:intergenic 55.0%
TCCAAATTTGCAGCCACGGG+TGG + chr3_1:63996155-63996174 Msa0367950:intron 55.0%
TCCACCCGTGGCTGCAAATT+TGG - chr3_1:63996159-63996178 None:intergenic 55.0%
TGTCACGGCAAACCAAGCCA+AGG + chr3_1:63996212-63996231 Msa0367950:CDS 55.0%
ACGGCAAACCAAGCCAAGGT+CGG + chr3_1:63996216-63996235 Msa0367950:CDS 55.0%
AGGCCCAATGTAACCGACCT+TGG - chr3_1:63996232-63996251 None:intergenic 55.0%
AAGGTCAAGTGCAGCAGCCT+GGG - chr3_1:63996505-63996524 None:intergenic 55.0%
CAGATTGGGGCACAAGTCCA+AGG - chr3_1:63996524-63996543 None:intergenic 55.0%
TGGCCTGCAGTTCCAACAGT+TGG + chr3_1:63996750-63996769 Msa0367950:CDS 55.0%
GAGCTCTGTCCGAGATAGCA+GGG + chr3_1:63996802-63996821 Msa0367950:CDS 55.0%
AGCTCTGTCCGAGATAGCAG+GGG + chr3_1:63996803-63996822 Msa0367950:CDS 55.0%
TTGGCGCTACAGTCCTCAGT+CGG - chr3_1:63996866-63996885 None:intergenic 55.0%
AGCGCCAAACCTTGCGCAAA+TGG + chr3_1:63996878-63996897 Msa0367950:CDS 55.0%
CTCTCTCGTCCATTTGCGCA+AGG - chr3_1:63996890-63996909 None:intergenic 55.0%
ACCGCAATCCCGAATGGTGA+TGG - chr3_1:63996966-63996985 None:intergenic 55.0%
AAGCAAGGTCTTGCTTGGCC+AGG - chr3_1:63997130-63997149 None:intergenic 55.0%
GCCAAGCAAGACCTTGCTTG+CGG + chr3_1:63997131-63997150 Msa0367950:three_prime_UTR 55.0%
TCCGCAAGCAAGGTCTTGCT+TGG - chr3_1:63997135-63997154 None:intergenic 55.0%
CGAGAAGCTTTCCGCAAGCA+AGG - chr3_1:63997145-63997164 None:intergenic 55.0%
TCCACGCTCAAACCCAGATG+GGG - chr3_1:63997689-63997708 None:intergenic 55.0%
TCCCATACCACCACACTGGA+AGG + chr3_1:63997877-63997896 Msa0367950:three_prime_UTR 55.0%
CTCCTTCCAGTGTGGTGGTA+TGG - chr3_1:63997882-63997901 None:intergenic 55.0%
GAGAGTGAGGTGGGAGGTGA+AGG - chr3_1:63990225-63990244 None:intergenic 60.0%
AGATGGGAGAGTGAGGTGGG+AGG - chr3_1:63990231-63990250 None:intergenic 60.0%
TTGAACGGAGGAGGAGGAGG+CGG - chr3_1:63990377-63990396 None:intergenic 60.0%
GGCTCGGGTTTGCGAAGTTC+GGG - chr3_1:63990411-63990430 None:intergenic 60.0%
GGGCTCGGGTTTGCGAAGTT+CGG - chr3_1:63990412-63990431 None:intergenic 60.0%
CGACGAGAGGTTGTTCGGGT+TGG - chr3_1:63990446-63990465 None:intergenic 60.0%
ATGGACTCTAGCGCCAGCGA+CGG - chr3_1:63990487-63990506 None:intergenic 60.0%
GGCATGGCGCAAGAAGCAAC+AGG - chr3_1:63990699-63990718 None:intergenic 60.0%
CTAACCAGGAAGAGCGGGCA+TGG - chr3_1:63990715-63990734 None:intergenic 60.0%
ATGTCAGCTCAGGGCCAGCT+AGG + chr3_1:63992671-63992690 Msa0367950:intron 60.0%
AGGGTCGCAGTGAACAGGGA+CGG + chr3_1:63994052-63994071 Msa0367950:intron 60.0%
CGGGTTCACGTCCGCTTCTA+GGG + chr3_1:63994267-63994286 Msa0367950:intron 60.0%
AACGGCAGGAGCCCTAGAAG+CGG - chr3_1:63994281-63994300 None:intergenic 60.0%
!!! CTAGGGCTCCTGCCGTTTTC+CGG + chr3_1:63994284-63994303 Msa0367950:intron 60.0%
CCAAGTCTCACTGCCAGGGA+CGG - chr3_1:63995189-63995208 None:intergenic 60.0%
CGTCCCTGGCAGTGAGACTT+GGG + chr3_1:63995187-63995206 Msa0367950:intron 60.0%
CTCTCCCAAGTCTCACTGCC+AGG - chr3_1:63995194-63995213 None:intergenic 60.0%
AGGGCTTCACGCCAGTTCAC+AGG - chr3_1:63995592-63995611 None:intergenic 60.0%
ACCATAGCAGCTTCCACCCG+TGG - chr3_1:63996171-63996190 None:intergenic 60.0%
CAAGGTCAAGTGCAGCAGCC+TGG - chr3_1:63996506-63996525 None:intergenic 60.0%
CAGGCTGCTGCACTTGACCT+TGG + chr3_1:63996504-63996523 Msa0367950:CDS 60.0%
CGAGCTCTGTCCGAGATAGC+AGG + chr3_1:63996801-63996820 Msa0367950:CDS 60.0%
TGGCGCTACAGTCCTCAGTC+GGG - chr3_1:63996865-63996884 None:intergenic 60.0%
GCGGAAAGCTTCTCGGACGT+TGG + chr3_1:63997150-63997169 Msa0367950:three_prime_UTR 60.0%
ACCCCATCTGGGTTTGAGCG+TGG + chr3_1:63997685-63997704 Msa0367950:three_prime_UTR 60.0%
GCAGTCCCATACCACCACAC+TGG + chr3_1:63997873-63997892 Msa0367950:three_prime_UTR 60.0%
AGTGGCTGCTCCTTCCAGTG+TGG - chr3_1:63997890-63997909 None:intergenic 60.0%
CCGCCCCATCTCATTCCATC+CGG - chr3_1:63998348-63998367 None:intergenic 60.0%
CCGGATGGAATGAGATGGGG+CGG + chr3_1:63998345-63998364 Msa0367950:intron 60.0%
! GGTGGTTGGTCGGAGGGTCT+TGG - chr3_1:63990352-63990371 None:intergenic 65.0%
TGAACGGAGGAGGAGGAGGC+GGG - chr3_1:63990376-63990395 None:intergenic 65.0%
!! TTCGGGTTGGGGTTGTGCGG+CGG - chr3_1:63990433-63990452 None:intergenic 65.0%
CGGGGAGTGAGATCGACGAG+AGG - chr3_1:63990459-63990478 None:intergenic 65.0%
TAGCGCCAGCGACGGGTGTA+CGG - chr3_1:63990479-63990498 None:intergenic 65.0%
TGGACTCTAGCGCCAGCGAC+GGG - chr3_1:63990486-63990505 None:intergenic 65.0%
GCGGAATAGCGTGGCGAAGG+AGG + chr3_1:63994155-63994174 Msa0367950:intron 65.0%
GCGGGTTCACGTCCGCTTCT+AGG + chr3_1:63994266-63994285 Msa0367950:intron 65.0%
GGTGGTAGCCGGAAAACGGC+AGG - chr3_1:63994295-63994314 None:intergenic 65.0%
CCGTCCCTGGCAGTGAGACT+TGG + chr3_1:63995186-63995205 Msa0367950:intron 65.0%
GCCACGGGTGGAAGCTGCTA+TGG + chr3_1:63996167-63996186 Msa0367950:intron 65.0%
GGCTGCTCCTTCCAGTGTGG+TGG - chr3_1:63997887-63997906 None:intergenic 65.0%
! GCGGGTGGTGGTTGGTCGGA+GGG - chr3_1:63990358-63990377 None:intergenic 70.0%
! GGAGGCGGGTGGTGGTTGGT+CGG - chr3_1:63990362-63990381 None:intergenic 70.0%
! AGGAGGAGGCGGGTGGTGGT+TGG - chr3_1:63990366-63990385 None:intergenic 70.0%
! TTGGGGTTGTGCGGCGGGCT+CGG - chr3_1:63990427-63990446 None:intergenic 70.0%
!! TCGGGTTGGGGTTGTGCGGC+GGG - chr3_1:63990432-63990451 None:intergenic 70.0%
ACTCCCCGTACACCCGTCGC+TGG + chr3_1:63990471-63990490 Msa0367950:CDS 70.0%
AGCGCCAGCGACGGGTGTAC+GGG - chr3_1:63990478-63990497 None:intergenic 70.0%
TGCGCCATGCCCGCTCTTCC+TGG + chr3_1:63990708-63990727 Msa0367950:CDS 70.0%
GTGCAGCAGCCTGGGCAGCA+TGG - chr3_1:63996497-63996516 None:intergenic 70.0%
! GGCGGGTGGTGGTTGGTCGG+AGG - chr3_1:63990359-63990378 None:intergenic 75.0%
GAGGAGGAGGAGGCGGGTGG+TGG - chr3_1:63990370-63990389 None:intergenic 75.0%
ACGGAGGAGGAGGAGGCGGG+TGG - chr3_1:63990373-63990392 None:intergenic 75.0%
! TGGGGTTGTGCGGCGGGCTC+GGG - chr3_1:63990426-63990445 None:intergenic 75.0%
GCGCCAGCGACGGGTGTACG+GGG - chr3_1:63990477-63990496 None:intergenic 75.0%
GGGGAGTTCGCGCCCGACTG+AGG + chr3_1:63996850-63996869 Msa0367950:CDS 75.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 63990153 63998432 63990153 ID=Msa0367950;Name=Msa0367950
chr3_1 mRNA 63990153 63998432 63990153 ID=Msa0367950-mRNA-1;Parent=Msa0367950;Name=Msa0367950-mRNA-1;_AED=0.00;_eAED=0.00;_QI=174|1|1|1|0.8|0.66|6|1026|739
chr3_1 exon 63990153 63990729 63990153 ID=Msa0367950-mRNA-1:exon:12763;Parent=Msa0367950-mRNA-1
chr3_1 exon 63992087 63992333 63992087 ID=Msa0367950-mRNA-1:exon:12764;Parent=Msa0367950-mRNA-1
chr3_1 exon 63992874 63993168 63992874 ID=Msa0367950-mRNA-1:exon:12765;Parent=Msa0367950-mRNA-1
chr3_1 exon 63995481 63995855 63995481 ID=Msa0367950-mRNA-1:exon:12766;Parent=Msa0367950-mRNA-1
chr3_1 exon 63996168 63998008 63996168 ID=Msa0367950-mRNA-1:exon:12767;Parent=Msa0367950-mRNA-1
chr3_1 exon 63998348 63998432 63998348 ID=Msa0367950-mRNA-1:exon:12768;Parent=Msa0367950-mRNA-1
chr3_1 five_prime_UTR 63990153 63990326 63990153 ID=Msa0367950-mRNA-1:five_prime_utr;Parent=Msa0367950-mRNA-1
chr3_1 CDS 63990327 63990729 63990327 ID=Msa0367950-mRNA-1:cds;Parent=Msa0367950-mRNA-1
chr3_1 CDS 63992087 63992333 63992087 ID=Msa0367950-mRNA-1:cds;Parent=Msa0367950-mRNA-1
chr3_1 CDS 63992874 63993168 63992874 ID=Msa0367950-mRNA-1:cds;Parent=Msa0367950-mRNA-1
chr3_1 CDS 63995481 63995855 63995481 ID=Msa0367950-mRNA-1:cds;Parent=Msa0367950-mRNA-1
chr3_1 CDS 63996168 63997067 63996168 ID=Msa0367950-mRNA-1:cds;Parent=Msa0367950-mRNA-1
chr3_1 three_prime_UTR 63997068 63998008 63997068 ID=Msa0367950-mRNA-1:three_prime_utr;Parent=Msa0367950-mRNA-1
chr3_1 three_prime_UTR 63998348 63998432 63998348 ID=Msa0367950-mRNA-1:three_prime_utr;Parent=Msa0367950-mRNA-1
Gene Sequence

>Msa0367950

ATGGGGCTGGGTTTGTTAGCTTCCAAGACCCTCCGACCAACCACCACCCGCCTCCTCCTCCTCCGTTCAATCACAACCAAACCCGAACTTCGCAAACCCGAGCCCGCCGCACAACCCCAACCCGAACAACCTCTCGTCGATCTCACTCCCCGTACACCCGTCGCTGGCGCTAGAGTCCATTTCCCCAATCCCGATGACGCTATTGAGGTTTTCGTCGATGGATACCCCGTTAAAATTCCGAAAGGATTCTCTGTTCTTCAAGCGTGTGAGGTTGCTGGTGTTGATATTCCTAGATTTTGTTATCATAGCAGACTTTCCATTGCTGGAAATTGTCGTATGTGTCTTGTTGAGGTTGAGAAATCTCCTAAGCCTGTTGCTTCTTGCGCCATGCCCGCTCTTCCTGGGATGAAAATCAAGACTGACACACCTATAGCCAAGAAAGCACGAGAAGGAGTGATGGAGTTTTTATTGATGAATCATCCATTAGATTGCCCAATTTGTGATCAGGGTGGAGAGTGTGATCTTCAGGATCAGTCAATGGCATTTGGCTCTGATCGTGGTCGTTTCACTGATATGAAGAGATCTGTGGTGGATAAAAATCTTGGACCTTTGGTAAAGACTGTGATGACACGGTGCATTCAATGTACAAGGTGTGTTAGATTCGCATCAGAGGTTGCAGGGGTTCAGGATCTTGGCATGTTAGGTCGTGGTAGTGGAGAAGAGATTGGAACATATGTTGAAAAACTCATGACAAGTGAACTCTCTGGAAATGTAATAGATATCTGCCCTGTAGGAGCACTCACTTCAAAACCTTTTGCATTTAAAGCCCGGAATTGGGAGTTGAAGAATACAGAGACCATTGATGTTACTGATGCTGTTGGTTCCAATATTCGAATTGATAGCAGAGGACCTGAAGTCATGCGCATTGTTCCTCGTTTAAATGAGGACATAAACGAAGAGTGGATTTCAGACAAAACCCGCTTTTGTTATGATGGTTTGAAGAGGCAGAGGTTAAATGACCCTATGATTCGTGGTCCTGATGGCCGCTTTAAGCCTGTGAACTGGCGTGAAGCCCTTTCTTTGGTAGCAGAGGTTGTGCATCAAGTTAAACCAGAAGAAATTGTTGGAATATCTGGCAAACTTTCTGATGCTGAGTCCATGATTGCACTAAAAGATTTCTTAAACAGGCTGGGGTCAAATAATGTATGGGGCGAAGGAATTGGCGTAAATACTAATGCTGATTTCAGATCAGGATATATTATGAATACTAGCATTGCTGGTCTTGAGAAAGCAGATGCTTTCCTGTTGGTTGGCACCCAGCCACGGGTGGAAGCTGCTATGGTTAATGCTAGAATACGCAAGACTGTCACGGCAAACCAAGCCAAGGTCGGTTACATTGGGCCTGCTACTGATTTTAACTATGATAACGAACATCTTGGTACTGGTCCTCAAACACTTCTTGAAATTGCTGAGGGTCGACACCCATTTTCCAAGACTATTTCAAATGCCAAAAACCCTGTTATCATTGTTGGTGCTGGGATTTTTGAGAGGAAGGATCAGGATGCAATTTTTGCAGCTGTTGAAACCATCGCAAAACAAGGGAATATCGTCAGATCTGATTGGAATGGCCTTAATGTATTACTTCTCCATGCTGCCCAGGCTGCTGCACTTGACCTTGGACTTGTGCCCCAATCTGAAAAAAGCCTTGAATCTGCAAAGTTTGTATATTTAATGGGAGCTGATGATACAAACTTGGACAAGATCCCGAAGGATGCTTTTGTTGTTTATCAAGGTCATCATGGTGATAAGAGTGTTTATCGTGCTAATGTCATTTTGCCAGCAGCTGCATTCAGTGAGAAGGAAGGTACATATGAAAATACTGAAGGATGCACACAGCAAACATGGCCTGCAGTTCCAACAGTTGGAGACTCCAGAGATGATTGGAAGATAATTCGAGCTCTGTCCGAGATAGCAGGGGTGCGTTTACCCTATGATACAATTGGGGGAGTTCGCGCCCGACTGAGGACTGTAGCGCCAAACCTTGCGCAAATGGACGAGAGAGAACCAGCTGCATTGCCATCTTCACTGAGACCAACCTTCACTAAGAAGGTGGATCCATCACCATTCGGGATTGCGGTTGAGAATTTCTATATGACTGATGCAATTACCAGGGCATCAAAGATAATGGCTCAATGCAGTGCTATGCTGTTGAAGAAATGA
Protein sequence

>Msa0367950

MGLGLLASKTLRPTTTRLLLLRSITTKPELRKPEPAAQPQPEQPLVDLTPRTPVAGARVHFPNPDDAIEVFVDGYPVKIPKGFSVLQACEVAGVDIPRFCYHSRLSIAGNCRMCLVEVEKSPKPVASCAMPALPGMKIKTDTPIAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRGRFTDMKRSVVDKNLGPLVKTVMTRCIQCTRCVRFASEVAGVQDLGMLGRGSGEEIGTYVEKLMTSELSGNVIDICPVGALTSKPFAFKARNWELKNTETIDVTDAVGSNIRIDSRGPEVMRIVPRLNEDINEEWISDKTRFCYDGLKRQRLNDPMIRGPDGRFKPVNWREALSLVAEVVHQVKPEEIVGISGKLSDAESMIALKDFLNRLGSNNVWGEGIGVNTNADFRSGYIMNTSIAGLEKADAFLLVGTQPRVEAAMVNARIRKTVTANQAKVGYIGPATDFNYDNEHLGTGPQTLLEIAEGRHPFSKTISNAKNPVIIVGAGIFERKDQDAIFAAVETIAKQGNIVRSDWNGLNVLLLHAAQAAALDLGLVPQSEKSLESAKFVYLMGADDTNLDKIPKDAFVVYQGHHGDKSVYRANVILPAAAFSEKEGTYENTEGCTQQTWPAVPTVGDSRDDWKIIRALSEIAGVRLPYDTIGGVRARLRTVAPNLAQMDEREPAALPSSLRPTFTKKVDPSPFGIAVENFYMTDAITRASKIMAQCSAMLLKK*