AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1361280

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1361280 MtrunA17_Chr3g0110161 98.516 741 9 1 1 741 1 739 0.0 1505
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1361280 AT5G37510.1 78.658 745 155 1 1 741 1 745 0.0 1213
Msa1361280 AT5G37510.2 78.658 745 155 1 1 741 1 745 0.0 1212

Find 286 sgRNAs with CRISPR-Local

Find 621 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACTCCTTCTCGTGCTTTCT+TGG 0.148903 tig0017414:-27765 None:intergenic
TGCAAAGTTTGTATATTTAA+TGG 0.190393 tig0017414:+32266 Msa1361280:CDS
TTTGAAATAGTCTTGGAAAA+TGG 0.193927 tig0017414:-32036 None:intergenic
TCTCCACCCTGATCACAAAT+TGG 0.219635 tig0017414:-27824 None:intergenic
GTACGATATGATTTGAAATT+AGG 0.222863 tig0017414:+32881 Msa1361280:three_prime_UTR
GAAGAAATTGTTGGAATATC+TGG 0.232864 tig0017414:+31355 Msa1361280:CDS
TAGATCTGTGTTGTTGATTT+GGG 0.239867 tig0017414:-25937 None:intergenic
TGCGCCATGCCCGCTCTTCC+TGG 0.245156 tig0017414:+26362 Msa1361280:CDS
TTGGGGCTGAGCGGCGGGTT+CGG 0.245373 tig0017414:-26078 None:intergenic
TGCTGACAAATTTGAGCTTT+TGG 0.249369 tig0017414:-33509 Msa1361290:CDS
GAGGAGGAGGCGGGTGGTGG+TGG 0.250324 tig0017414:-26018 None:intergenic
TTAGATCTGTGTTGTTGATT+TGG 0.281459 tig0017414:-25938 None:intergenic
TGGGGCTGAGCGGCGGGTTC+GGG 0.281624 tig0017414:-26077 None:intergenic
TATTCTTCAACTCCCAATTC+CGG 0.285395 tig0017414:-28757 None:intergenic
GAGGAGGCGGGTGGTGGTGG+TGG 0.291433 tig0017414:-26015 None:intergenic
AATGAAACTGCAACCCCATC+TGG 0.297886 tig0017414:+33379 Msa1361280:three_prime_UTR
ATGGGGTTGCAGTTTCATTC+AGG 0.298110 tig0017414:-33375 Msa1361290:CDS
TTGCATTTAAAGCCCGGAAT+TGG 0.299665 tig0017414:+28744 Msa1361280:CDS
ATAAACCAAACCCCATTGTT+AGG 0.307081 tig0017414:-25968 None:intergenic
CATAGCAGACTTTCCATTGC+TGG 0.307168 tig0017414:+26284 Msa1361280:CDS
TCTGCTATCAATTCGAATAT+TGG 0.314496 tig0017414:-28813 None:intergenic
GGGTTCGGGTTTGCGGAGTT+CGG 0.321764 tig0017414:-26063 None:intergenic
AATGGTGATGCGAGTGTATA+TGG 0.321818 tig0017414:-25911 None:intergenic
GACGAGAGGTTGTTCAGGTT+GGG 0.322345 tig0017414:-26096 None:intergenic
CTCCTTCCAGTGTGGTGGTA+TGG 0.325511 tig0017414:-33585 Msa1361290:CDS
GCAAAGTTTGTATATTTAAT+GGG 0.327097 tig0017414:+32267 Msa1361280:CDS
TCTCGTGCTTTCTTGGCTAT+AGG 0.335594 tig0017414:-27758 None:intergenic
GATATTCCAACAATTTCTTC+TGG 0.338173 tig0017414:-31352 None:intergenic
TTATTTGAATGATGTAGTTT+TGG 0.339391 tig0017414:-33043 None:intergenic
GGGTGGAGAGTGTGATCTTC+AGG 0.340342 tig0017414:+27838 Msa1361280:CDS
TTGAAATAGTCTTGGAAAAT+GGG 0.343715 tig0017414:-32035 None:intergenic
ATACAAACTTTGCAGATTCA+AGG 0.344116 tig0017414:-32257 None:intergenic
CGTTTACCCTATGATACAAT+TGG 0.350227 tig0017414:+32534 Msa1361280:CDS
GGTTCGGGTTTGCGGAGTTC+GGG 0.354183 tig0017414:-26062 None:intergenic
CCATCAGGACCACGAATCAT+AGG 0.356983 tig0017414:-31262 None:intergenic
GGATGATCCGATTTCAGATT+CGG 0.358068 tig0017414:-25852 None:intergenic
GTTCAGGATCTTGGCATGTT+AGG 0.371949 tig0017414:+28611 Msa1361280:CDS
CTGGCGTGAAGCCCTTTCTT+TGG 0.376057 tig0017414:+31303 Msa1361280:CDS
ATTCTTCAACTCCCAATTCC+GGG 0.378095 tig0017414:-28756 None:intergenic
CACTAAAAGATTTCTTAAAC+AGG 0.378664 tig0017414:+31407 Msa1361280:CDS
CCAGCACCAACAATGATAAC+AGG 0.379076 tig0017414:-32069 None:intergenic
GTTGCAGGGGTTCAGGATCT+TGG 0.379251 tig0017414:+28602 Msa1361280:CDS
TCGATAGCGTCATCGGGATT+GGG 0.379722 tig0017414:-26164 None:intergenic
GAGGAGGAGGAGGCGGGTGG+TGG 0.381251 tig0017414:-26021 None:intergenic
TCCGCAAGCAAGGTCTTGCT+TGG 0.384804 tig0017414:-32838 None:intergenic
TCACAAATTGGGCAATCTAA+TGG 0.385374 tig0017414:-27812 None:intergenic
GGAACAATGCGCATGACTTC+AGG 0.385946 tig0017414:-28839 None:intergenic
TCAGGTTGGGGCTGAGCGGC+GGG 0.387179 tig0017414:-26083 None:intergenic
CTCGATAGCGTCATCGGGAT+TGG 0.388965 tig0017414:-26165 None:intergenic
GGGTTTGCGGAGTTCGGGTT+TGG 0.389818 tig0017414:-26057 None:intergenic
CAGGCTGCTGCACTTGACCT+TGG 0.391023 tig0017414:+32210 Msa1361280:CDS
TTTATTACAACTTACACGTT+TGG 0.391207 tig0017414:-33472 Msa1361290:CDS
AGATTGCCCAATTTGTGATC+AGG 0.398118 tig0017414:+27817 Msa1361280:CDS
CAGGATCAGTCAATGGCATT+TGG 0.398437 tig0017414:+27857 Msa1361280:CDS
TCCTTCCAGTGTGGTGGTAT+GGG 0.398894 tig0017414:-33584 Msa1361290:CDS
ATTATGAATACTAGCATTGC+TGG 0.399661 tig0017414:+31499 Msa1361280:CDS
CTTCAAGCGTGTGAGGTTGC+TGG 0.401893 tig0017414:+26236 Msa1361280:CDS
CATGGAGAAGTAATACATTA+AGG 0.402841 tig0017414:-32182 None:intergenic
TACCAGGGCATCAAAGATAA+TGG 0.403072 tig0017414:+32719 Msa1361280:CDS
ATCAGAGGTTGCAGGGGTTC+AGG 0.403687 tig0017414:+28595 Msa1361280:CDS
CTGCTATGATAACAAAATCT+AGG 0.407506 tig0017414:-26269 None:intergenic
AAAAGATTTCTTAAACAGGC+TGG 0.409928 tig0017414:+31411 Msa1361280:CDS
TCGTCCATTTGCGCAAGGTT+TGG 0.410243 tig0017414:-32588 None:intergenic
TGCATTTAAAGCCCGGAATT+GGG 0.411080 tig0017414:+28745 Msa1361280:CDS
CTTGCTTGCGGAAAGCTTCT+CGG 0.413187 tig0017414:+32849 Msa1361280:three_prime_UTR
GTTTACCCTATGATACAATT+GGG 0.415159 tig0017414:+32535 Msa1361280:CDS
AACTATGATAACGAACATCT+TGG 0.415474 tig0017414:+31970 Msa1361280:CDS
GTTAAACCAGAAGAAATTGT+TGG 0.417305 tig0017414:+31346 Msa1361280:CDS
TCCACCCTAACAATGGGGTT+TGG 0.419261 tig0017414:+25963 Msa1361280:exon
AATGTATGGGGCGAAGGAAT+TGG 0.421514 tig0017414:+31442 Msa1361280:CDS
GAGCGGCGGGTTCGGGTTTG+CGG 0.422300 tig0017414:-26070 None:intergenic
AGCGCCAAACCTTGCGCAAA+TGG 0.424180 tig0017414:+32584 Msa1361280:CDS
TTCAGGTTGGGGCTGAGCGG+CGG 0.426747 tig0017414:-26084 None:intergenic
AGGTGGATCCATCACCATTC+GGG 0.428089 tig0017414:+32661 Msa1361280:CDS
GGCTGGGGTCAAATAATGTA+TGG 0.432511 tig0017414:+31428 Msa1361280:CDS
AGCGCCAGCGACGGGTGTAC+GGG 0.434794 tig0017414:-26129 None:intergenic
GCGCAAGAAGCAACAGGCTT+AGG 0.435847 tig0017414:-26344 None:intergenic
AATTATCTTCCAATCATCTC+TGG 0.439607 tig0017414:-32484 None:intergenic
AGATCGACGAGAGGTTGTTC+AGG 0.439627 tig0017414:-26101 None:intergenic
GTTGCAAGTAATAATGAGAC+AGG 0.440167 tig0017414:-33196 None:intergenic
AAACAACAAAAGCATCCTTC+GGG 0.441280 tig0017414:-32317 None:intergenic
GATGATCCGATTTCAGATTC+GGG 0.442991 tig0017414:-25851 None:intergenic
AGCCATTATCTTTGATGCCC+TGG 0.443739 tig0017414:-32721 None:intergenic
AAAGATTTCTTAAACAGGCT+GGG 0.445416 tig0017414:+31412 Msa1361280:CDS
AGCAAACCCGAATCTGAAAT+CGG 0.445881 tig0017414:+25845 Msa1361280:five_prime_UTR
TTCTCACTGAATGCAGCTGC+TGG 0.446093 tig0017414:-32390 None:intergenic
CGACGAGAGGTTGTTCAGGT+TGG 0.449270 tig0017414:-26097 None:intergenic
ACTAATGCTGATTTCAGATC+AGG 0.449684 tig0017414:+31472 Msa1361280:CDS
GAAGTGACTCATTTAACATC+AGG 0.450043 tig0017414:-33245 None:intergenic
CAAGGTCAAGTGCAGCAGCC+TGG 0.450413 tig0017414:-32209 None:intergenic
CTCTCTCGTCCATTTGCGCA+AGG 0.451054 tig0017414:-32593 None:intergenic
TGAGATGGGGCGGTAGAAAT+CGG 0.453420 tig0017414:+34062 Msa1361280:three_prime_UTR
TTTGGCATTTGAAATAGTCT+TGG 0.453444 tig0017414:-32043 None:intergenic
TGAAGAACAGAGAATCCTTT+CGG 0.453943 tig0017414:-26218 None:intergenic
TATGTCCCTCAACACATTTG+TGG 0.455044 tig0017414:-33147 None:intergenic
TCATTCAGGTGTGTTGACTC+TGG 0.457303 tig0017414:-33361 Msa1361290:CDS
TTGAACGGAGGAGGAGGAGG+CGG 0.458930 tig0017414:-26028 None:intergenic
TAAACAACAAAAGCATCCTT+CGG 0.459831 tig0017414:-32318 None:intergenic
TTCCGGGCTTTAAATGCAAA+AGG 0.460040 tig0017414:-28740 None:intergenic
GCAATTTCAAGAAGTGTTTG+AGG 0.460236 tig0017414:-32000 None:intergenic
TCTCCAACTGTTGGAACTGC+AGG 0.461407 tig0017414:-32459 None:intergenic
TTACACCAGCAAAATACAAA+TGG 0.461758 tig0017414:-32915 None:intergenic
CTCCACCCTGATCACAAATT+GGG 0.462587 tig0017414:-27823 None:intergenic
GGCATGGCGCAAGAAGCAAC+AGG 0.463187 tig0017414:-26350 None:intergenic
TGGTGGTGATTGAACGGAGG+AGG 0.463432 tig0017414:-26037 None:intergenic
TAGCGCCAGCGACGGGTGTA+CGG 0.465790 tig0017414:-26130 None:intergenic
CAAGCCAAGGTCGGTTACAT+TGG 0.466458 tig0017414:+31931 Msa1361280:CDS
CTAACATCCACCCTAACAAT+GGG 0.466724 tig0017414:+25957 Msa1361280:exon
CCTGTTATCATTGTTGGTGC+TGG 0.468259 tig0017414:+32069 Msa1361280:CDS
CGAGCTCTGTCCGAGATAGC+AGG 0.468342 tig0017414:+32507 Msa1361280:CDS
CTGTTATCATTGTTGGTGCT+GGG 0.468439 tig0017414:+32070 Msa1361280:CDS
ACAGGCTTAAAGCGGCCATC+AGG 0.470321 tig0017414:-31277 None:intergenic
GTTGTTTATCAAGGTCATCA+TGG 0.473741 tig0017414:+32333 Msa1361280:CDS
GAAAACCTCGATAGCGTCAT+CGG 0.473854 tig0017414:-26171 None:intergenic
TGGTGATTGAACGGAGGAGG+AGG 0.476683 tig0017414:-26034 None:intergenic
CAACCTCTGCTACCAAAGAA+AGG 0.479683 tig0017414:-31315 None:intergenic
AAGGTGGATCCATCACCATT+CGG 0.479718 tig0017414:+32660 Msa1361280:CDS
CTCTGTTCTTCAAGCGTGTG+AGG 0.480791 tig0017414:+26229 Msa1361280:CDS
TAAACGCACCCCTGCTATCT+CGG 0.480951 tig0017414:-32517 None:intergenic
GCTGCCATTGTAAGAGTGTA+AGG 0.481558 tig0017414:-33621 Msa1361290:CDS
CATTGTTCCTCGTTTAAATG+AGG 0.482600 tig0017414:+28853 Msa1361280:CDS
AATTGTTTAGAATCGTGAAA+TGG 0.482890 tig0017414:-33671 None:intergenic
AAGGTCAAGTGCAGCAGCCT+GGG 0.483480 tig0017414:-32208 None:intergenic
GCCGCTTTAAGCCTGTGAAC+TGG 0.484016 tig0017414:+31284 Msa1361280:CDS
AAGCCAAGGTCGGTTACATT+GGG 0.484241 tig0017414:+31932 Msa1361280:CDS
TGAACGGAGGAGGAGGAGGC+GGG 0.484386 tig0017414:-26027 None:intergenic
TCCACCTTCTTAGTGAAGGT+TGG 0.484390 tig0017414:-32645 None:intergenic
CAATGTAACCGACCTTGGCT+TGG 0.485781 tig0017414:-31930 None:intergenic
ATACCTGGGTGCCAACCAAC+AGG 0.486083 tig0017414:-31543 None:intergenic
CGGGTTTGGTGGTGATTGAA+CGG 0.490273 tig0017414:-26043 None:intergenic
ACGAGAGGTTGTTCAGGTTG+GGG 0.490622 tig0017414:-26095 None:intergenic
TTGGAGACTCCAGAGATGAT+TGG 0.491323 tig0017414:+32475 Msa1361280:CDS
TTTGAAGTGAGTGCTCCTAC+AGG 0.494027 tig0017414:-28716 None:intergenic
GATTGCCCAATTTGTGATCA+GGG 0.494519 tig0017414:+27818 Msa1361280:CDS
TAAACCAAACCCCATTGTTA+GGG 0.495727 tig0017414:-25967 None:intergenic
ATGATGGTTTGAAGAGGCAG+AGG 0.496611 tig0017414:+31230 Msa1361280:CDS
TTTCCTGTTGGTTGGCACCC+AGG 0.498602 tig0017414:+31540 Msa1361280:CDS
TGATTGAACGGAGGAGGAGG+AGG 0.499246 tig0017414:-26031 None:intergenic
TTTGCGGAGTTCGGGTTTGG+TGG 0.501325 tig0017414:-26054 None:intergenic
TCAAATAATGTATGGGGCGA+AGG 0.502062 tig0017414:+31436 Msa1361280:CDS
CAAACCATCATAACAAAAGC+GGG 0.502070 tig0017414:-31218 None:intergenic
CACACATTCTGTAAAATATG+TGG 0.502947 tig0017414:-33433 Msa1361290:CDS
AGTGAAGATGGCAATGCAGC+TGG 0.503709 tig0017414:-32618 None:intergenic
AGAATCTAACCAGGAAGAGC+GGG 0.505711 tig0017414:-26371 None:intergenic
CGTGGTAGTGGAGAAGAGAT+TGG 0.506494 tig0017414:+28635 Msa1361280:CDS
TTGGATTGCACATGCTTCCA+AGG 0.506814 tig0017414:-33024 None:intergenic
GAAAGCACGAGAAGGAGTGA+TGG 0.508097 tig0017414:+27769 Msa1361280:CDS
GCTGAAAGAGTGGTGCATAC+AGG 0.509427 tig0017414:-33646 Msa1361290:CDS
ACGGAGGAGGAGGAGGCGGG+TGG 0.509605 tig0017414:-26024 None:intergenic
GCAGATGCTTTCCTGTTGGT+TGG 0.510700 tig0017414:+31532 Msa1361280:CDS
GGTGGTGGTGGTTTGACGAA+AGG 0.512548 tig0017414:-26003 None:intergenic
AGGGCTTCACGCCAGTTCAC+AGG 0.513098 tig0017414:-31295 None:intergenic
AGCCCTTTCTTTGGTAGCAG+AGG 0.515340 tig0017414:+31312 Msa1361280:CDS
GGTGCTGCTTCATATACTCT+AGG 0.516465 tig0017414:-33126 None:intergenic
GCGGAAAGCTTCTCGGACGT+TGG 0.516627 tig0017414:+32856 Msa1361280:three_prime_UTR
TCCAAATTTGCAGCCACGGG+TGG 0.516967 tig0017414:+31861 Msa1361280:intron
ACCGCAATCCCGAATGGTGA+TGG 0.517659 tig0017414:-32669 None:intergenic
GTAATAGATATCTGCCCTGT+AGG 0.517990 tig0017414:+28701 Msa1361280:CDS
AAGATTTCTTAAACAGGCTG+GGG 0.519660 tig0017414:+31413 Msa1361280:CDS
GCCACGGGTGGAAGCTGCTA+TGG 0.519839 tig0017414:+31873 Msa1361280:intron
AAAAGCTCAAATTTGTCAGC+AGG 0.523277 tig0017414:+33511 Msa1361280:three_prime_UTR
CACGGTGCATTCAATGTACA+AGG 0.523747 tig0017414:+27960 Msa1361280:CDS
AAAACCTCGATAGCGTCATC+GGG 0.526600 tig0017414:-26170 None:intergenic
AAGGTTGGTCTCAGTGAAGA+TGG 0.527216 tig0017414:-32630 None:intergenic
GTGCAGCAGCCTGGGCAGCA+TGG 0.527867 tig0017414:-32200 None:intergenic
TCCATCACCATTCGGGATTG+CGG 0.530979 tig0017414:+32668 Msa1361280:CDS
GATTCGCATCAGAGGTTGCA+GGG 0.532762 tig0017414:+28588 Msa1361280:CDS
TCAAACCATCATAACAAAAG+CGG 0.533289 tig0017414:-31219 None:intergenic
ACTCCCCGTACACCCGTCGC+TGG 0.533775 tig0017414:+26125 Msa1361280:CDS
TCTCTGGAGTCTCCAACTGT+TGG 0.533784 tig0017414:-32468 None:intergenic
CAGATTGGGGCACAAGTCCA+AGG 0.534798 tig0017414:-32227 None:intergenic
TGTCTCATAAAATGAAACCT+TGG 0.535900 tig0017414:+33007 Msa1361280:three_prime_UTR
GGCATGTTAGGTCGTGGTAG+TGG 0.535963 tig0017414:+28623 Msa1361280:CDS
ATCCACGCTCAAACCCAGAT+GGG 0.537345 tig0017414:-33393 Msa1361290:CDS
AAGCAAGGTCTTGCTTGGCC+AGG 0.537505 tig0017414:-32833 None:intergenic
ATATGACTGATGCAATTACC+AGG 0.537594 tig0017414:+32703 Msa1361280:CDS
CAGCACCACAAATGTGTTGA+GGG 0.538891 tig0017414:+33142 Msa1361280:three_prime_UTR
AACCTCTGCTACCAAAGAAA+GGG 0.540408 tig0017414:-31314 None:intergenic
TTGTCGTATGTGTCTTGTTG+AGG 0.541076 tig0017414:+26310 Msa1361280:CDS
GATAACGAACATCTTGGTAC+TGG 0.541143 tig0017414:+31976 Msa1361280:CDS
AAGAATCTAACCAGGAAGAG+CGG 0.541343 tig0017414:-26372 None:intergenic
CCGCCCCATCTCATTCCATC+CGG 0.541441 tig0017414:-34052 None:intergenic
AGGCCCAATGTAACCGACCT+TGG 0.541841 tig0017414:-31935 None:intergenic
TGGCCTGCAGTTCCAACAGT+TGG 0.541849 tig0017414:+32456 Msa1361280:CDS
TTGGCGCTACAGTCCTCAGT+CGG 0.542821 tig0017414:-32569 None:intergenic
CCAGCAAAATACAAATGGAA+TGG 0.543143 tig0017414:-32910 None:intergenic
AGCAGCTGCATTCAGTGAGA+AGG 0.545961 tig0017414:+32392 Msa1361280:CDS
CCTATGATTCGTGGTCCTGA+TGG 0.547239 tig0017414:+31262 Msa1361280:CDS
TGTACTCTAGCGCCAGCGAC+GGG 0.547564 tig0017414:-26137 None:intergenic
AAACATATCTTCATGTTCAA+AGG 0.547900 tig0017414:-33272 Msa1361290:CDS
ATTACTTCTCCATGCTGCCC+AGG 0.551990 tig0017414:+32191 Msa1361280:CDS
AGATCTGTGTTGTTGATTTG+GGG 0.552360 tig0017414:-25936 None:intergenic
TGGCGCTACAGTCCTCAGTC+GGG 0.554048 tig0017414:-32568 None:intergenic
CTCACCGGATGGAATGAGAT+GGG 0.554149 tig0017414:+34048 Msa1361280:intron
GCTGGGGTCAAATAATGTAT+GGG 0.555168 tig0017414:+31429 Msa1361280:CDS
AACACTTCTTGAAATTGCTG+AGG 0.556487 tig0017414:+32005 Msa1361280:CDS
CTAACCAGGAAGAGCGGGCA+TGG 0.557243 tig0017414:-26366 None:intergenic
TCATAGTTAAAATCAGTAGC+AGG 0.558013 tig0017414:-31955 None:intergenic
CGATAGCGTCATCGGGATTG+GGG 0.558144 tig0017414:-26163 None:intergenic
AGATTCGCATCAGAGGTTGC+AGG 0.558678 tig0017414:+28587 Msa1361280:CDS
GGGAGCTGATGATACAAACT+TGG 0.560243 tig0017414:+32287 Msa1361280:CDS
GGGGAGTTCGCGCCCGACTG+AGG 0.561987 tig0017414:+32556 Msa1361280:CDS
GTTGAAACCATCGCAAAACA+AGG 0.564233 tig0017414:+32132 Msa1361280:CDS
TCCACCTTACACTCTTACAA+TGG 0.566175 tig0017414:+33617 Msa1361280:three_prime_UTR
GAGCTCTGTCCGAGATAGCA+GGG 0.566857 tig0017414:+32508 Msa1361280:CDS
ATTGATGTTACTGATGCTGT+TGG 0.567155 tig0017414:+28788 Msa1361280:CDS
ATGAAACTGCAACCCCATCT+GGG 0.567537 tig0017414:+33380 Msa1361280:three_prime_UTR
TGATCTTCAGGATCAGTCAA+TGG 0.567607 tig0017414:+27850 Msa1361280:CDS
ATGTACTCTAGCGCCAGCGA+CGG 0.568207 tig0017414:-26138 None:intergenic
GGACTAACCCGAATTGTACA+TGG 0.571193 tig0017414:-32962 None:intergenic
CATCAGGACCACGAATCATA+GGG 0.571545 tig0017414:-31261 None:intergenic
GGCTGCTCCTTCCAGTGTGG+TGG 0.572723 tig0017414:-33590 Msa1361290:CDS
AAGGATGCACACAGCAAACA+TGG 0.573067 tig0017414:+32436 Msa1361280:CDS
CTCATGACAAGTGAACTCTC+TGG 0.573975 tig0017414:+28674 Msa1361280:CDS
CGAGAAGCTTTCCGCAAGCA+AGG 0.575896 tig0017414:-32848 None:intergenic
TTAAATGACCCTATGATTCG+TGG 0.576146 tig0017414:+31253 Msa1361280:CDS
TCTAACATCCACCCTAACAA+TGG 0.577250 tig0017414:+25956 Msa1361280:exon
CATACGACAATTTCCAGCAA+TGG 0.579258 tig0017414:-26297 None:intergenic
TATCCACGCTCAAACCCAGA+TGG 0.580657 tig0017414:-33394 Msa1361290:CDS
GATCTTGGCATGTTAGGTCG+TGG 0.583375 tig0017414:+28617 Msa1361280:CDS
ACCCCATCTGGGTTTGAGCG+TGG 0.585189 tig0017414:+33391 Msa1361280:three_prime_UTR
AACAGCATCAGTAACATCAA+TGG 0.585328 tig0017414:-28786 None:intergenic
ACACTTCTTGAAATTGCTGA+GGG 0.586259 tig0017414:+32006 Msa1361280:CDS
GGAATGTCGTCAGATCTGAT+TGG 0.587771 tig0017414:+32154 Msa1361280:CDS
TTCTCAACCGCAATCCCGAA+TGG 0.588558 tig0017414:-32675 None:intergenic
ACTCACCGGATGGAATGAGA+TGG 0.590930 tig0017414:+34047 Msa1361280:intron
ACCAAACCCCATTGTTAGGG+TGG 0.591247 tig0017414:-25964 None:intergenic
ATTATCAGAACTATTAGATG+AGG 0.591864 tig0017414:+34091 Msa1361280:three_prime_UTR
TGCAGGACATAAACGAAGAG+TGG 0.593125 tig0017414:+31182 Msa1361280:intron
TCCCATACCACCACACTGGA+AGG 0.593387 tig0017414:+33583 Msa1361280:three_prime_UTR
GAGACCAACCTTCACTAAGA+AGG 0.595141 tig0017414:+32641 Msa1361280:CDS
TTTACCCTATGATACAATTG+GGG 0.596584 tig0017414:+32536 Msa1361280:CDS
TGGATCCACCTTCTTAGTGA+AGG 0.596835 tig0017414:-32649 None:intergenic
TTGAAGTGAGTGCTCCTACA+GGG 0.600626 tig0017414:-28715 None:intergenic
ATGGCATTTGGCTCTGATCG+TGG 0.602789 tig0017414:+27869 Msa1361280:CDS
AACAGTAATTGACAGGAGCT+AGG 0.603433 tig0017414:-33705 None:intergenic
TTGTTCAGGTTGGGGCTGAG+CGG 0.604200 tig0017414:-26087 None:intergenic
GATCTGTGTTGTTGATTTGG+GGG 0.604683 tig0017414:-25935 None:intergenic
GTCGTCAGATCTGATTGGAA+TGG 0.604807 tig0017414:+32159 Msa1361280:CDS
AATATTCGAATTGATAGCAG+AGG 0.605002 tig0017414:+28815 Msa1361280:CDS
ACCATAGCAGCTTCCACCCG+TGG 0.605776 tig0017414:-31874 None:intergenic
TAAGAGTGTAAGGTGGAAAG+TGG 0.606116 tig0017414:-33611 Msa1361290:CDS
GCAGCACCACAAATGTGTTG+AGG 0.607116 tig0017414:+33141 Msa1361280:three_prime_UTR
GTGTGTTAGATTCGCATCAG+AGG 0.608633 tig0017414:+28580 Msa1361280:CDS
GAAAGCAGATGCTTTCCTGT+TGG 0.608999 tig0017414:+31528 Msa1361280:CDS
AAGTGACTCATTTAACATCA+GGG 0.610361 tig0017414:-33244 None:intergenic
TACCCCGTTAAAATTCCGAA+AGG 0.610431 tig0017414:+26203 Msa1361280:CDS
GTCATCACAGTCTTTACCAA+AGG 0.611871 tig0017414:-27938 None:intergenic
GCCAGTTCACAGGCTTAAAG+CGG 0.612009 tig0017414:-31285 None:intergenic
ACCAACCTTCACTAAGAAGG+TGG 0.614871 tig0017414:+32644 Msa1361280:CDS
GCCAAGCAAGACCTTGCTTG+CGG 0.618572 tig0017414:+32837 Msa1361280:three_prime_UTR
GCGCCAGCGACGGGTGTACG+GGG 0.624880 tig0017414:-26128 None:intergenic
GGTACATATGAAAATACTGA+AGG 0.625208 tig0017414:+32417 Msa1361280:CDS
TTTGTTATGATGGTTTGAAG+AGG 0.631528 tig0017414:+31224 Msa1361280:CDS
GAAAGAGTGGTGCATACAGG+AGG 0.638412 tig0017414:-33643 Msa1361290:CDS
CAATCCCGATGACGCTATCG+AGG 0.640482 tig0017414:+26166 Msa1361280:CDS
CCGGATGGAATGAGATGGGG+CGG 0.641578 tig0017414:+34052 Msa1361280:intron
ATAGCCAAGAAAGCACGAGA+AGG 0.643724 tig0017414:+27761 Msa1361280:CDS
AGTGGCTGCTCCTTCCAGTG+TGG 0.643923 tig0017414:-33593 Msa1361290:CDS
CAGCACCAACAATGATAACA+GGG 0.645958 tig0017414:-32068 None:intergenic
GCTGCATTCAGTGAGAAGGA+AGG 0.652544 tig0017414:+32396 Msa1361280:CDS
CTGGGGTCAAATAATGTATG+GGG 0.653742 tig0017414:+31430 Msa1361280:CDS
TAGAATACGCAAGACTGTCA+CGG 0.655290 tig0017414:+31903 Msa1361280:CDS
TCCACGCTCAAACCCAGATG+GGG 0.655649 tig0017414:-33392 Msa1361290:CDS
GAACTATTAGATGAGGTCTG+AGG 0.660767 tig0017414:+34098 Msa1361280:three_prime_UTR
ATTCGCATCAGAGGTTGCAG+GGG 0.664579 tig0017414:+28589 Msa1361280:CDS
TGATATGAAGAGATCTGTGG+TGG 0.665318 tig0017414:+27901 Msa1361280:CDS
TTGAAACCATCGCAAAACAA+GGG 0.668125 tig0017414:+32133 Msa1361280:CDS
GCCATTGTAAGAGTGTAAGG+TGG 0.669170 tig0017414:-33618 Msa1361290:CDS
TCACCGGATGGAATGAGATG+GGG 0.673142 tig0017414:+34049 Msa1361280:intron
TATGACTGATGCAATTACCA+GGG 0.680312 tig0017414:+32704 Msa1361280:CDS
AGCTCTGTCCGAGATAGCAG+GGG 0.680552 tig0017414:+32509 Msa1361280:CDS
ACGGCAAACCAAGCCAAGGT+CGG 0.681995 tig0017414:+31922 Msa1361280:CDS
TGTCACGGCAAACCAAGCCA+AGG 0.683373 tig0017414:+31918 Msa1361280:CDS
GCAGTCCCATACCACCACAC+TGG 0.684857 tig0017414:+33579 Msa1361280:three_prime_UTR
TTACCCTATGATACAATTGG+GGG 0.685077 tig0017414:+32537 Msa1361280:CDS
TGCCCAATTTGTGATCAGGG+TGG 0.691459 tig0017414:+27821 Msa1361280:CDS
GTTTGGTGGTGATTGAACGG+AGG 0.700949 tig0017414:-26040 None:intergenic
CACTGATATGAAGAGATCTG+TGG 0.705213 tig0017414:+27898 Msa1361280:CDS
CGGGGAGTGAGATCGACGAG+AGG 0.710019 tig0017414:-26110 None:intergenic
AAACTTGGACAAGATCCCGA+AGG 0.712042 tig0017414:+32302 Msa1361280:CDS
TGAAATGGAAGCTGAAAGAG+TGG 0.730036 tig0017414:-33656 None:intergenic
GGTGATGCGAGTGTATATGG+AGG 0.730846 tig0017414:-25908 None:intergenic
TAACATCCACCCTAACAATG+GGG 0.738744 tig0017414:+25958 Msa1361280:exon
TGGTAAAGACTGTGATGACA+CGG 0.740395 tig0017414:+27942 Msa1361280:CDS
AATCTAACCTCATTTAAACG+AGG 0.753181 tig0017414:-28860 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTGAAAAAATCATTTTTTAT+GGG + tig0017414:26769-26788 Msa1361280:intron 10.0%
!!! ATTACATTTTTAACAATAAA+TGG - tig0017414:27694-27713 None:intergenic 10.0%
!! ATATGATTAAAATAATATTC+TGG + tig0017414:28315-28334 Msa1361280:intron 10.0%
!!! GATTTTCAAATTTTATTAAT+TGG + tig0017414:29197-29216 Msa1361280:intron 10.0%
!!! ATAACATTTTTAAAAAGTTT+GGG - tig0017414:29815-29834 None:intergenic 10.0%
!!! AATAACATTTTTAAAAAGTT+TGG - tig0017414:29816-29835 None:intergenic 10.0%
!!! AATAAAATTATTCGATATTT+TGG - tig0017414:30551-30570 None:intergenic 10.0%
!!! ATATTTTTGGTATATAATAA+TGG + tig0017414:30742-30761 Msa1361280:intron 10.0%
!!! TATGAAAATTATTGTTTTAT+TGG + tig0017414:31732-31751 Msa1361280:intron 10.0%
!!! TGTTTGAAAAAATAGATTTT+GGG - tig0017414:26730-26749 None:intergenic 15.0%
!!! GTTGAAAAAATCATTTTTTA+TGG + tig0017414:26768-26787 Msa1361280:intron 15.0%
!!! ACTATTAAGTTTAATACTTT+TGG - tig0017414:27212-27231 None:intergenic 15.0%
!! AAAATTATCATATGTTTAGT+TGG + tig0017414:27554-27573 Msa1361280:intron 15.0%
!!! ATCTTACTTTTAATTTCATT+TGG + tig0017414:27608-27627 Msa1361280:intron 15.0%
!! TATAATCATATGTTCAATTT+AGG + tig0017414:27713-27732 Msa1361280:intron 15.0%
!! ATAATCATATGTTCAATTTA+GGG + tig0017414:27714-27733 Msa1361280:intron 15.0%
!! ATATATATATATAAAAGTGG+TGG + tig0017414:28238-28257 Msa1361280:intron 15.0%
!! CTATTATCACAATTTATTAT+GGG + tig0017414:29363-29382 Msa1361280:intron 15.0%
!!! TTTTTTAAGTGTTATTTACT+GGG + tig0017414:29626-29645 Msa1361280:intron 15.0%
!!! TAACATTTTTAAAAAGTTTG+GGG - tig0017414:29814-29833 None:intergenic 15.0%
!!! ATAATAATGGTATAATTTTG+TGG + tig0017414:30755-30774 Msa1361280:intron 15.0%
!! TTAAAGACGAAAAATAAAAA+TGG - tig0017414:31783-31802 None:intergenic 15.0%
!!! CGTGTATTATTTATTTTTTT+TGG + tig0017414:32776-32795 Msa1361280:three_prime_UTR 15.0%
!!! TTACCATTTTATTATTGTTA+AGG - tig0017414:34007-34026 None:intergenic 15.0%
!!! ATGAATTTTGTTGAAGATAT+TGG - tig0017414:25876-25895 None:intergenic 20.0%
!!! GTGTTTGAAAAAATAGATTT+TGG - tig0017414:26731-26750 None:intergenic 20.0%
!!! AAATCTATTTTTTCAAACAC+AGG + tig0017414:26731-26750 Msa1361280:intron 20.0%
!!! AAAAAATCATTTTTTATGGG+CGG + tig0017414:26772-26791 Msa1361280:intron 20.0%
!! ACAATATTAGATAAAGAGTT+GGG + tig0017414:26880-26899 Msa1361280:intron 20.0%
!!! GTTATTTTCAAATTTCTAGT+TGG + tig0017414:27255-27274 Msa1361280:intron 20.0%
!!! AAATTGTAGTTTGTAGATAA+CGG + tig0017414:27317-27336 Msa1361280:intron 20.0%
!! TGATATTCTTGTAAGAATTA+AGG + tig0017414:28126-28145 Msa1361280:intron 20.0%
!! ATTTAATTGACAACAAAAAG+AGG - tig0017414:28489-28508 None:intergenic 20.0%
!!! ATGTTTTATTAAACTACTTG+CGG + tig0017414:28892-28911 Msa1361280:intron 20.0%
!! ACAACCAATTAAATAAATCA+AGG - tig0017414:29120-29139 None:intergenic 20.0%
!! TGATTTATTTAATTGGTTGT+AGG + tig0017414:29120-29139 Msa1361280:intron 20.0%
!! TAATAAATTGTGATAATAGG+AGG - tig0017414:29362-29381 None:intergenic 20.0%
!! CCATAATAAATTGTGATAAT+AGG - tig0017414:29365-29384 None:intergenic 20.0%
!! CCTATTATCACAATTTATTA+TGG + tig0017414:29362-29381 Msa1361280:intron 20.0%
!!! GTTTTTTAAGTGTTATTTAC+TGG + tig0017414:29625-29644 Msa1361280:intron 20.0%
!!! AACATTTTTAAAAAGTTTGG+GGG - tig0017414:29813-29832 None:intergenic 20.0%
!!! GAGATGATGTTTTATATTTA+GGG + tig0017414:30121-30140 Msa1361280:intron 20.0%
!! TAATGTCTAACAAATGTTTA+CGG + tig0017414:30265-30284 Msa1361280:intron 20.0%
!! TTAGAGTTAGAAATTCATAT+GGG + tig0017414:30291-30310 Msa1361280:intron 20.0%
!!! AAAATTATTCGATATTTTGG+CGG - tig0017414:30548-30567 None:intergenic 20.0%
!!! ATTATAATTTGTAGATTCTG+AGG + tig0017414:30711-30730 Msa1361280:intron 20.0%
!! AATAAATTAGAGATATACCT+GGG - tig0017414:31560-31579 None:intergenic 20.0%
!! AAATAAATTAGAGATATACC+TGG - tig0017414:31561-31580 None:intergenic 20.0%
!! AGATATTAATGCATAAAAGA+TGG - tig0017414:31812-31831 None:intergenic 20.0%
!!! ATCTTTTATGCATTAATATC+TGG + tig0017414:31811-31830 Msa1361280:intron 20.0%
!! TGCAAAGTTTGTATATTTAA+TGG + tig0017414:32266-32285 Msa1361280:CDS 20.0%
!! GCAAAGTTTGTATATTTAAT+GGG + tig0017414:32267-32286 Msa1361280:CDS 20.0%
!!! TTATTTGAATGATGTAGTTT+TGG - tig0017414:33046-33065 None:intergenic 20.0%
!! GATCCTTAACAATAATAAAA+TGG + tig0017414:34001-34020 Msa1361280:intron 20.0%
! AAAAAAGTAAGAATCTAACC+AGG - tig0017414:26383-26402 None:intergenic 25.0%
!!! TACTTTTTTTTTTCTGTTGC+TGG + tig0017414:26394-26413 Msa1361280:intron 25.0%
!!! CTACTACACTTATTTTAATC+CGG - tig0017414:26531-26550 None:intergenic 25.0%
!!! TTTTGTCATTTGTAAGTGTT+AGG + tig0017414:26646-26665 Msa1361280:intron 25.0%
!!! GAAAAAATAGATTTTGGGAA+AGG - tig0017414:26725-26744 None:intergenic 25.0%
! GACAATATTAGATAAAGAGT+TGG + tig0017414:26879-26898 Msa1361280:intron 25.0%
! CAATATTAGATAAAGAGTTG+GGG + tig0017414:26881-26900 Msa1361280:intron 25.0%
! TATGAGAGAAACTATTAAGA+AGG + tig0017414:27050-27069 Msa1361280:intron 25.0%
! TATATGATAGAACATTATGC+CGG + tig0017414:27106-27125 Msa1361280:intron 25.0%
!!! TGATTCTTTTGATTAGTTCA+AGG + tig0017414:27186-27205 Msa1361280:intron 25.0%
! AAAAAGAAATGTCAACTAGA+TGG - tig0017414:27400-27419 None:intergenic 25.0%
! TATCATATGTTTAGTTGGTT+TGG + tig0017414:27559-27578 Msa1361280:intron 25.0%
!! ATCATATGTTTAGTTGGTTT+GGG + tig0017414:27560-27579 Msa1361280:intron 25.0%
! TAAAGATAATCAAGTTTGCA+AGG - tig0017414:27995-28014 None:intergenic 25.0%
!! TTGATAACTATATCATACCT+TGG + tig0017414:28025-28044 Msa1361280:intron 25.0%
! TAAATTAAAAGAAACCTAGC+TGG - tig0017414:28394-28413 None:intergenic 25.0%
!!! GCTAGGTTTCTTTTAATTTA+TGG + tig0017414:28394-28413 Msa1361280:intron 25.0%
!! ATTTTATCTGAGTTCCTTAA+TGG + tig0017414:28527-28546 Msa1361280:intron 25.0%
! AATTCATACTACGAAATCAT+AGG - tig0017414:29007-29026 None:intergenic 25.0%
! CTGACCTTGATTTATTTAAT+TGG + tig0017414:29113-29132 Msa1361280:intron 25.0%
! AAGTAATCAGGTTAATATCA+GGG - tig0017414:29284-29303 None:intergenic 25.0%
! AAAGTAATCAGGTTAATATC+AGG - tig0017414:29285-29304 None:intergenic 25.0%
! ATCTTGTGAAAAATTAGCAT+GGG - tig0017414:29738-29757 None:intergenic 25.0%
! TATCTTGTGAAAAATTAGCA+TGG - tig0017414:29739-29758 None:intergenic 25.0%
!! ATGCTAATTTTTCACAAGAT+AGG + tig0017414:29738-29757 Msa1361280:intron 25.0%
!! TGCTAATTTTTCACAAGATA+GGG + tig0017414:29739-29758 Msa1361280:intron 25.0%
! TATAAAACATCATCTCCAAA+AGG - tig0017414:30117-30136 None:intergenic 25.0%
!! GGAGATGATGTTTTATATTT+AGG + tig0017414:30120-30139 Msa1361280:intron 25.0%
!! AGAATGTATATCTTAGCTTT+AGG + tig0017414:30149-30168 Msa1361280:intron 25.0%
!!! GAATGTATATCTTAGCTTTA+GGG + tig0017414:30150-30169 Msa1361280:intron 25.0%
! TTTGTTAGACATTAGGAATT+AGG - tig0017414:30259-30278 None:intergenic 25.0%
!! GTAAACATTTGTTAGACATT+AGG - tig0017414:30266-30285 None:intergenic 25.0%
! GTTAGAGTTAGAAATTCATA+TGG + tig0017414:30290-30309 Msa1361280:intron 25.0%
! AGAGAAGTTATTAAGTATGA+TGG + tig0017414:30363-30382 Msa1361280:intron 25.0%
!!! TGAGGTATCTCTAATATTTT+TGG + tig0017414:30729-30748 Msa1361280:intron 25.0%
! TATATGCTTAATTTAGCAGA+AGG + tig0017414:31110-31129 Msa1361280:intron 25.0%
! ATATGCTTAATTTAGCAGAA+GGG + tig0017414:31111-31130 Msa1361280:intron 25.0%
! CACTAAAAGATTTCTTAAAC+AGG + tig0017414:31407-31426 Msa1361280:CDS 25.0%
!!! ACTTCTCTAGTTTTATGTTA+TGG + tig0017414:31590-31609 Msa1361280:intron 25.0%
! CAATATATAACAGGAATCAT+TGG - tig0017414:31620-31639 None:intergenic 25.0%
! ATCGCATTTCAATATATAAC+AGG - tig0017414:31629-31648 None:intergenic 25.0%
!! TTGAAATAGTCTTGGAAAAT+GGG - tig0017414:32038-32057 None:intergenic 25.0%
!! TTTGAAATAGTCTTGGAAAA+TGG - tig0017414:32039-32058 None:intergenic 25.0%
!! GTACGATATGATTTGAAATT+AGG + tig0017414:32881-32900 Msa1361280:three_prime_UTR 25.0%
!! AATTTTTGCCATGTACAATT+CGG + tig0017414:32954-32973 Msa1361280:three_prime_UTR 25.0%
!! GTAAACTTTTAACAAACAGT+CGG - tig0017414:32986-33005 None:intergenic 25.0%
! AAACATATCTTCATGTTCAA+AGG - tig0017414:33275-33294 Msa1361290:CDS 25.0%
! TTTATTACAACTTACACGTT+TGG - tig0017414:33475-33494 Msa1361290:CDS 25.0%
!! AATTGTTTAGAATCGTGAAA+TGG - tig0017414:33674-33693 None:intergenic 25.0%
! AAATCAAGCTATGAAGAATT+CGG + tig0017414:33789-33808 Msa1361280:intron 25.0%
! ATTATCAGAACTATTAGATG+AGG + tig0017414:34091-34110 Msa1361280:three_prime_UTR 25.0%
!! TAGATCTGTGTTGTTGATTT+GGG - tig0017414:25940-25959 None:intergenic 30.0%
! TTAGATCTGTGTTGTTGATT+TGG - tig0017414:25941-25960 None:intergenic 30.0%
!! AATCCTTTCGGAATTTTAAC+GGG - tig0017414:26209-26228 None:intergenic 30.0%
! GAATCCTTTCGGAATTTTAA+CGG - tig0017414:26210-26229 None:intergenic 30.0%
CTGCTATGATAACAAAATCT+AGG - tig0017414:26272-26291 None:intergenic 30.0%
!!! TGAGTTTTGTTGTGTGTAAA+TGG + tig0017414:26481-26500 Msa1361280:intron 30.0%
TAGAGATGAAGATATTGCAT+TGG + tig0017414:26548-26567 Msa1361280:intron 30.0%
TAATGCTAGACCATGATTTA+GGG + tig0017414:26579-26598 Msa1361280:intron 30.0%
TCATTTGTAAGTGTTAGGTT+AGG + tig0017414:26651-26670 Msa1361280:intron 30.0%
! AATAAGGAGAGTATATCAGA+TGG + tig0017414:26984-27003 Msa1361280:intron 30.0%
! GTTTCTCTCATAGTTTTTCT+AGG - tig0017414:27042-27061 None:intergenic 30.0%
! AGAGATTAATGAGTTGGATA+AGG + tig0017414:27077-27096 Msa1361280:intron 30.0%
CTATTAGACACATAACTAGA+TGG - tig0017414:27359-27378 None:intergenic 30.0%
!! TCATATGTTTAGTTGGTTTG+GGG + tig0017414:27561-27580 Msa1361280:intron 30.0%
!! ACCTTGATTTTGTTTAGTTG+AGG + tig0017414:27661-27680 Msa1361280:intron 30.0%
ACCTCAACTAAACAAAATCA+AGG - tig0017414:27665-27684 None:intergenic 30.0%
TATATATATGCAACTCAACG+AGG - tig0017414:28153-28172 None:intergenic 30.0%
TCTGGTGTGATAATTTAGTT+TGG + tig0017414:28333-28352 Msa1361280:intron 30.0%
AATTTATGGTTAACGACATC+TGG + tig0017414:28408-28427 Msa1361280:intron 30.0%
AATTGACAACAAAAAGAGGA+TGG - tig0017414:28485-28504 None:intergenic 30.0%
GGAAGAAAGTAATATTTCAC+CGG - tig0017414:28555-28574 None:intergenic 30.0%
AAATATTACTTTCTTCCCAC+AGG + tig0017414:28558-28577 Msa1361280:intron 30.0%
TCTGCTATCAATTCGAATAT+TGG - tig0017414:28816-28835 None:intergenic 30.0%
! AATATTCGAATTGATAGCAG+AGG + tig0017414:28815-28834 Msa1361280:CDS 30.0%
AATCTAACCTCATTTAAACG+AGG - tig0017414:28863-28882 None:intergenic 30.0%
TAAATGAGGTTAGATTCTGA+TGG + tig0017414:28867-28886 Msa1361280:intron 30.0%
ACAACACTCATAAGTACTTA+AGG - tig0017414:28984-29003 None:intergenic 30.0%
AGTAATCAGGTTAATATCAG+GGG - tig0017414:29283-29302 None:intergenic 30.0%
GCTAGTGATATAAAGTAATC+AGG - tig0017414:29296-29315 None:intergenic 30.0%
TAGCAATGATTACATTGATG+TGG + tig0017414:29312-29331 Msa1361280:intron 30.0%
AGCAATGATTACATTGATGT+GGG + tig0017414:29313-29332 Msa1361280:intron 30.0%
ACAATTTATTATGGGACTGA+AGG + tig0017414:29371-29390 Msa1361280:intron 30.0%
TGAATAACTACTCAGACAAT+TGG - tig0017414:29442-29461 None:intergenic 30.0%
AAAATGCTCACATATTCTTC+TGG - tig0017414:29493-29512 None:intergenic 30.0%
CATGATTCATGATCAATCAA+TGG - tig0017414:29652-29671 None:intergenic 30.0%
GGATACACATTCAACTAAAT+GGG + tig0017414:29779-29798 Msa1361280:intron 30.0%
GATACACATTCAACTAAATG+GGG + tig0017414:29780-29799 Msa1361280:intron 30.0%
ATACACATTCAACTAAATGG+GGG + tig0017414:29781-29800 Msa1361280:intron 30.0%
CCTATCATAAACCAAACAAT+GGG + tig0017414:30191-30210 Msa1361280:intron 30.0%
TCTTCCTAATGTCTAACAAA+TGG + tig0017414:30221-30240 Msa1361280:intron 30.0%
CTTCCTAATGTCTAACAAAT+GGG + tig0017414:30222-30241 Msa1361280:intron 30.0%
TTAGGAATTAGGAACATACT+TGG - tig0017414:30248-30267 None:intergenic 30.0%
GACTATAAATCAGTGTACAA+AGG - tig0017414:30434-30453 None:intergenic 30.0%
! TATCTCGCTATAGCATTTTA+AGG + tig0017414:30468-30487 Msa1361280:intron 30.0%
! ATCTCGCTATAGCATTTTAA+GGG + tig0017414:30469-30488 Msa1361280:intron 30.0%
!!! GCTATCTAGTTTTAACAACA+TGG + tig0017414:30508-30527 Msa1361280:intron 30.0%
GAGATTATTGAATGCTTGTT+TGG + tig0017414:30604-30623 Msa1361280:intron 30.0%
! TTGTCGTTGATAGAAATTTC+TGG + tig0017414:30867-30886 Msa1361280:intron 30.0%
CGTAAAATATTAATCCTCAC+TGG - tig0017414:31056-31075 None:intergenic 30.0%
TCAAACCATCATAACAAAAG+CGG - tig0017414:31222-31241 None:intergenic 30.0%
! TTTGTTATGATGGTTTGAAG+AGG + tig0017414:31224-31243 Msa1361280:CDS 30.0%
GTTAAACCAGAAGAAATTGT+TGG + tig0017414:31346-31365 Msa1361280:CDS 30.0%
GATATTCCAACAATTTCTTC+TGG - tig0017414:31355-31374 None:intergenic 30.0%
GAAGAAATTGTTGGAATATC+TGG + tig0017414:31355-31374 Msa1361280:CDS 30.0%
! GAAATCTTTTAGTGCAATCA+TGG - tig0017414:31401-31420 None:intergenic 30.0%
AAAAGATTTCTTAAACAGGC+TGG + tig0017414:31411-31430 Msa1361280:CDS 30.0%
AAAGATTTCTTAAACAGGCT+GGG + tig0017414:31412-31431 Msa1361280:CDS 30.0%
ATTATGAATACTAGCATTGC+TGG + tig0017414:31499-31518 Msa1361280:CDS 30.0%
! GGATTTCATAACTGTAGTTT+TGG + tig0017414:31676-31695 Msa1361280:intron 30.0%
ATTAATATCTGGTGTCTGTT+TGG + tig0017414:31822-31841 Msa1361280:intron 30.0%
TCATAGTTAAAATCAGTAGC+AGG - tig0017414:31958-31977 None:intergenic 30.0%
! AACTATGATAACGAACATCT+TGG + tig0017414:31970-31989 Msa1361280:CDS 30.0%
! TTTGGCATTTGAAATAGTCT+TGG - tig0017414:32046-32065 None:intergenic 30.0%
! AACAATGATAACAGGGTTTT+TGG - tig0017414:32064-32083 None:intergenic 30.0%
AAAAACCCTGTTATCATTGT+TGG + tig0017414:32063-32082 Msa1361280:CDS 30.0%
CATGGAGAAGTAATACATTA+AGG - tig0017414:32185-32204 None:intergenic 30.0%
!!! TTCAAGGCTTTTTTCAGATT+GGG - tig0017414:32244-32263 None:intergenic 30.0%
!!! ATTCAAGGCTTTTTTCAGAT+TGG - tig0017414:32245-32264 None:intergenic 30.0%
ATACAAACTTTGCAGATTCA+AGG - tig0017414:32260-32279 None:intergenic 30.0%
!! TAAACAACAAAAGCATCCTT+CGG - tig0017414:32321-32340 None:intergenic 30.0%
!!! GATGCTTTTGTTGTTTATCA+AGG + tig0017414:32324-32343 Msa1361280:CDS 30.0%
GGTACATATGAAAATACTGA+AGG + tig0017414:32417-32436 Msa1361280:CDS 30.0%
AATTATCTTCCAATCATCTC+TGG - tig0017414:32487-32506 None:intergenic 30.0%
GTTTACCCTATGATACAATT+GGG + tig0017414:32535-32554 Msa1361280:CDS 30.0%
TTTACCCTATGATACAATTG+GGG + tig0017414:32536-32555 Msa1361280:CDS 30.0%
TTACACCAGCAAAATACAAA+TGG - tig0017414:32918-32937 None:intergenic 30.0%
! ATTTTTGCCATGTACAATTC+GGG + tig0017414:32955-32974 Msa1361280:three_prime_UTR 30.0%
TGTCTCATAAAATGAAACCT+TGG + tig0017414:33007-33026 Msa1361280:three_prime_UTR 30.0%
AAGTGACTCATTTAACATCA+GGG - tig0017414:33247-33266 None:intergenic 30.0%
CACACATTCTGTAAAATATG+TGG - tig0017414:33436-33455 Msa1361290:CDS 30.0%
TCAATATTACATGCATTTCC+AGG + tig0017414:33844-33863 Msa1361280:intron 30.0%
CAATATTACATGCATTTCCA+GGG + tig0017414:33845-33864 Msa1361280:intron 30.0%
! CATTATCTGCTTCTTTTGTT+GGG - tig0017414:33940-33959 None:intergenic 30.0%
! ACATTATCTGCTTCTTTTGT+TGG - tig0017414:33941-33960 None:intergenic 30.0%
AAATGGTAACAAGAGATAGA+AGG + tig0017414:34018-34037 Msa1361280:intron 30.0%
!! AGATCTGTGTTGTTGATTTG+GGG - tig0017414:25939-25958 None:intergenic 35.0%
TAAACCAAACCCCATTGTTA+GGG - tig0017414:25970-25989 None:intergenic 35.0%
ATAAACCAAACCCCATTGTT+AGG - tig0017414:25971-25990 None:intergenic 35.0%
!! ATCCTTTCGGAATTTTAACG+GGG - tig0017414:26208-26227 None:intergenic 35.0%
TGAAGAACAGAGAATCCTTT+CGG - tig0017414:26221-26240 None:intergenic 35.0%
AAGATATTGCATTGGATGTG+TGG + tig0017414:26556-26575 Msa1361280:intron 35.0%
GTAATGCTAGACCATGATTT+AGG + tig0017414:26578-26597 Msa1361280:intron 35.0%
! TCTACCATCTTTTCTCCAAT+AGG - tig0017414:26913-26932 None:intergenic 35.0%
GAGAAAAGATGGTAGAAACT+CGG + tig0017414:26917-26936 Msa1361280:intron 35.0%
GACTTGTAGATTCTGCAATA+AGG + tig0017414:26968-26987 Msa1361280:intron 35.0%
GGATCTAGAGATTAATGAGT+TGG + tig0017414:27071-27090 Msa1361280:intron 35.0%
! TTGATGATTGCATTGTTGCT+TGG + tig0017414:27231-27250 Msa1361280:intron 35.0%
ATGTCAACTAGATGGTTACA+AGG - tig0017414:27392-27411 None:intergenic 35.0%
TCACAAATTGGGCAATCTAA+TGG - tig0017414:27815-27834 None:intergenic 35.0%
!! TCTGTGGTGGATAAAAATCT+TGG + tig0017414:27914-27933 Msa1361280:CDS 35.0%
GGATAAAAATCTTGGACCTT+TGG + tig0017414:27922-27941 Msa1361280:CDS 35.0%
!! CAACAAATTTCTAGCTTCCA+AGG - tig0017414:28045-28064 None:intergenic 35.0%
TTACAGTATGATAGTTTCCG+AGG + tig0017414:28267-28286 Msa1361280:intron 35.0%
TACAGTATGATAGTTTCCGA+GGG + tig0017414:28268-28287 Msa1361280:intron 35.0%
AAAACCCAACCTTCAACATT+TGG + tig0017414:28456-28475 Msa1361280:intron 35.0%
AAACCCAACCTTCAACATTT+GGG + tig0017414:28457-28476 Msa1361280:intron 35.0%
ATATTTCACCGGATCCATTA+AGG - tig0017414:28544-28563 None:intergenic 35.0%
!! AACCTTTTGCATTTAAAGCC+CGG + tig0017414:28738-28757 Msa1361280:CDS 35.0%
TATTCTTCAACTCCCAATTC+CGG - tig0017414:28760-28779 None:intergenic 35.0%
AACAGCATCAGTAACATCAA+TGG - tig0017414:28789-28808 None:intergenic 35.0%
ATTGATGTTACTGATGCTGT+TGG + tig0017414:28788-28807 Msa1361280:CDS 35.0%
CATTGTTCCTCGTTTAAATG+AGG + tig0017414:28853-28872 Msa1361280:CDS 35.0%
AACTCTTGCAAGAAAAACCA+TGG + tig0017414:28956-28975 Msa1361280:intron 35.0%
! CATAAGTACTTAAGGTACCA+TGG - tig0017414:28976-28995 None:intergenic 35.0%
CAATCTACACTCCAACTTAT+AGG + tig0017414:29055-29074 Msa1361280:intron 35.0%
!! AAGCATCGATTCCTATAAGT+TGG - tig0017414:29069-29088 None:intergenic 35.0%
AATCGATGCTTACCAAAAGT+TGG + tig0017414:29078-29097 Msa1361280:intron 35.0%
! AATTCACTGGTACCAACTTT+TGG - tig0017414:29093-29112 None:intergenic 35.0%
AAATCAAGGTCAGAATTCAC+TGG - tig0017414:29106-29125 None:intergenic 35.0%
TCAACTCGCTTATGTCATAA+TGG - tig0017414:29179-29198 None:intergenic 35.0%
ACATGTGTAATGTGTTTCAG+AGG - tig0017414:29226-29245 None:intergenic 35.0%
CACATTACACATGTTGTGTT+TGG + tig0017414:29232-29251 Msa1361280:intron 35.0%
TTTACAGACTGGTAAGCTAA+AGG - tig0017414:29562-29581 None:intergenic 35.0%
TTACCAGTCTGTAAATGCTA+TGG + tig0017414:29567-29586 Msa1361280:intron 35.0%
TACCAGTCTGTAAATGCTAT+GGG + tig0017414:29568-29587 Msa1361280:intron 35.0%
AGGGATAACAATTAAGAAGC+TGG + tig0017414:29603-29622 Msa1361280:intron 35.0%
CATGAATCATGAAGTAACCT+TGG + tig0017414:29661-29680 Msa1361280:intron 35.0%
! TGCACATTTTATACAGTCCA+AGG - tig0017414:29681-29700 None:intergenic 35.0%
TTGTGAAAAATTAGCATGGG+AGG - tig0017414:29735-29754 None:intergenic 35.0%
CGGATACACATTCAACTAAA+TGG + tig0017414:29778-29797 Msa1361280:intron 35.0%
TTCAACAATGGCTATGATAG+TGG + tig0017414:29918-29937 Msa1361280:intron 35.0%
! CTTGTTTCTTCACAACATGA+GGG - tig0017414:30022-30041 None:intergenic 35.0%
! ACTTGTTTCTTCACAACATG+AGG - tig0017414:30023-30042 None:intergenic 35.0%
! TGATGATGACGAAAATATGC+AGG + tig0017414:30059-30078 Msa1361280:intron 35.0%
! GATGATGACGAAAATATGCA+GGG + tig0017414:30060-30079 Msa1361280:intron 35.0%
! ATGATGACGAAAATATGCAG+GGG + tig0017414:30061-30080 Msa1361280:intron 35.0%
GCCTATCATAAACCAAACAA+TGG + tig0017414:30190-30209 Msa1361280:intron 35.0%
! CCCATTGTTTGGTTTATGAT+AGG - tig0017414:30194-30213 None:intergenic 35.0%
AAGATACTTGACCCATTGTT+TGG - tig0017414:30205-30224 None:intergenic 35.0%
TGTCTAACAAATGTTTACGG+CGG + tig0017414:30268-30287 Msa1361280:intron 35.0%
!! AAAACCCGCTTTTGTTATGA+TGG + tig0017414:31214-31233 Msa1361280:CDS 35.0%
CAAACCATCATAACAAAAGC+GGG - tig0017414:31221-31240 None:intergenic 35.0%
TTAAATGACCCTATGATTCG+TGG + tig0017414:31253-31272 Msa1361280:CDS 35.0%
AAGATTTCTTAAACAGGCTG+GGG + tig0017414:31413-31432 Msa1361280:CDS 35.0%
!! ACTAATGCTGATTTCAGATC+AGG + tig0017414:31472-31491 Msa1361280:CDS 35.0%
!! GCAATTTCAAGAAGTGTTTG+AGG - tig0017414:32003-32022 None:intergenic 35.0%
AACACTTCTTGAAATTGCTG+AGG + tig0017414:32005-32024 Msa1361280:CDS 35.0%
ACACTTCTTGAAATTGCTGA+GGG + tig0017414:32006-32025 Msa1361280:CDS 35.0%
TTGAAACCATCGCAAAACAA+GGG + tig0017414:32133-32152 Msa1361280:CDS 35.0%
!!! TCAAGGCTTTTTTCAGATTG+GGG - tig0017414:32243-32262 None:intergenic 35.0%
!! AAACAACAAAAGCATCCTTC+GGG - tig0017414:32320-32339 None:intergenic 35.0%
GTTGTTTATCAAGGTCATCA+TGG + tig0017414:32333-32352 Msa1361280:CDS 35.0%
CGTTTACCCTATGATACAAT+TGG + tig0017414:32534-32553 Msa1361280:CDS 35.0%
TTACCCTATGATACAATTGG+GGG + tig0017414:32537-32556 Msa1361280:CDS 35.0%
ATATGACTGATGCAATTACC+AGG + tig0017414:32703-32722 Msa1361280:CDS 35.0%
TATGACTGATGCAATTACCA+GGG + tig0017414:32704-32723 Msa1361280:CDS 35.0%
! GTTTCGTGTTTTTCTTTTCC+TGG + tig0017414:32815-32834 Msa1361280:three_prime_UTR 35.0%
CCAGCAAAATACAAATGGAA+TGG - tig0017414:32913-32932 None:intergenic 35.0%
! CCATTCCATTTGTATTTTGC+TGG + tig0017414:32910-32929 Msa1361280:three_prime_UTR 35.0%
GGGACATAAAAACTTCATTC+AGG + tig0017414:33162-33181 Msa1361280:three_prime_UTR 35.0%
GTTGCAAGTAATAATGAGAC+AGG - tig0017414:33199-33218 None:intergenic 35.0%
GAAGTGACTCATTTAACATC+AGG - tig0017414:33248-33267 None:intergenic 35.0%
!! TCGAAATCAAGCATTTTGAC+GGG - tig0017414:33327-33346 Msa1361290:CDS 35.0%
! GTCGAAATCAAGCATTTTGA+CGG - tig0017414:33328-33347 Msa1361290:CDS 35.0%
! GCTGACAAATTTGAGCTTTT+GGG - tig0017414:33511-33530 Msa1361290:CDS 35.0%
! TGCTGACAAATTTGAGCTTT+TGG - tig0017414:33512-33531 Msa1361290:CDS 35.0%
AAAAGCTCAAATTTGTCAGC+AGG + tig0017414:33511-33530 Msa1361280:three_prime_UTR 35.0%
ACTCACAAACAGTAATTGAC+AGG - tig0017414:33715-33734 None:intergenic 35.0%
CTTATGAAACTTATGAACCC+TGG - tig0017414:33865-33884 None:intergenic 35.0%
ATAGAAGGAAAGTAACTCAC+CGG + tig0017414:34033-34052 Msa1361280:intron 35.0%
! AGCAAACCCGAATCTGAAAT+CGG + tig0017414:25845-25864 Msa1361280:five_prime_UTR 40.0%
GATGATCCGATTTCAGATTC+GGG - tig0017414:25854-25873 None:intergenic 40.0%
GGATGATCCGATTTCAGATT+CGG - tig0017414:25855-25874 None:intergenic 40.0%
! AATGGTGATGCGAGTGTATA+TGG - tig0017414:25914-25933 None:intergenic 40.0%
!! TGTTGTTGATTTGGGGGAAA+TGG - tig0017414:25932-25951 None:intergenic 40.0%
!! GATCTGTGTTGTTGATTTGG+GGG - tig0017414:25938-25957 None:intergenic 40.0%
TCTAACATCCACCCTAACAA+TGG + tig0017414:25956-25975 Msa1361280:exon 40.0%
CTAACATCCACCCTAACAAT+GGG + tig0017414:25957-25976 Msa1361280:exon 40.0%
TAACATCCACCCTAACAATG+GGG + tig0017414:25958-25977 Msa1361280:exon 40.0%
TACCCCGTTAAAATTCCGAA+AGG + tig0017414:26203-26222 Msa1361280:CDS 40.0%
CATACGACAATTTCCAGCAA+TGG - tig0017414:26300-26319 None:intergenic 40.0%
! TTGTCGTATGTGTCTTGTTG+AGG + tig0017414:26310-26329 Msa1361280:CDS 40.0%
AAGAATCTAACCAGGAAGAG+CGG - tig0017414:26375-26394 None:intergenic 40.0%
GTTGTGTGTAAATGGAGTGT+TGG + tig0017414:26489-26508 Msa1361280:intron 40.0%
!! TGTGTAAATGGAGTGTTGGA+TGG + tig0017414:26493-26512 Msa1361280:intron 40.0%
TGGATGGTAAAGAACAACAC+CGG + tig0017414:26509-26528 Msa1361280:intron 40.0%
AACAAACGCACCCTAAATCA+TGG - tig0017414:26592-26611 None:intergenic 40.0%
! ACCATCTTTTCTCCAATAGG+TGG - tig0017414:26910-26929 None:intergenic 40.0%
AAACTCGGCATATGTGGTTT+GGG + tig0017414:26932-26951 Msa1361280:intron 40.0%
! AAGGAGAGTATATCAGATGG+AGG + tig0017414:26987-27006 Msa1361280:intron 40.0%
TGGCTACATGTATCAAACAC+CGG - tig0017414:27128-27147 None:intergenic 40.0%
CTTATTCCACTAAGTGTGGT+TGG - tig0017414:27148-27167 None:intergenic 40.0%
CAACCACACTTAGTGGAATA+AGG + tig0017414:27146-27165 Msa1361280:intron 40.0%
!! AAGCCTTATTCCACTAAGTG+TGG - tig0017414:27152-27171 None:intergenic 40.0%
AGATTGCCCAATTTGTGATC+AGG + tig0017414:27817-27836 Msa1361280:CDS 40.0%
GATTGCCCAATTTGTGATCA+GGG + tig0017414:27818-27837 Msa1361280:CDS 40.0%
TGATCTTCAGGATCAGTCAA+TGG + tig0017414:27850-27869 Msa1361280:CDS 40.0%
CACTGATATGAAGAGATCTG+TGG + tig0017414:27898-27917 Msa1361280:CDS 40.0%
TGATATGAAGAGATCTGTGG+TGG + tig0017414:27901-27920 Msa1361280:CDS 40.0%
GTCATCACAGTCTTTACCAA+AGG - tig0017414:27941-27960 None:intergenic 40.0%
TGGTAAAGACTGTGATGACA+CGG + tig0017414:27942-27961 Msa1361280:CDS 40.0%
ATAGTTTCCGAGGGAACTTA+CGG + tig0017414:28277-28296 Msa1361280:intron 40.0%
TAACGACATCTGGTAGCAAT+AGG + tig0017414:28418-28437 Msa1361280:intron 40.0%
! TCTGAGTTCCTTAATGGATC+CGG + tig0017414:28533-28552 Msa1361280:intron 40.0%
GTAATAGATATCTGCCCTGT+AGG + tig0017414:28701-28720 Msa1361280:CDS 40.0%
!! TTCCGGGCTTTAAATGCAAA+AGG - tig0017414:28743-28762 None:intergenic 40.0%
! TTGCATTTAAAGCCCGGAAT+TGG + tig0017414:28744-28763 Msa1361280:CDS 40.0%
! TGCATTTAAAGCCCGGAATT+GGG + tig0017414:28745-28764 Msa1361280:CDS 40.0%
ATTCTTCAACTCCCAATTCC+GGG - tig0017414:28759-28778 None:intergenic 40.0%
CCACAAGAAAACTGAAGCTT+TGG - tig0017414:28921-28940 None:intergenic 40.0%
! CCAAAGCTTCAGTTTTCTTG+TGG + tig0017414:28918-28937 Msa1361280:intron 40.0%
GATCTCAAGCCTTTGGTTAT+GGG + tig0017414:29519-29538 Msa1361280:intron 40.0%
ACCAGTCTGTAAATGCTATG+GGG + tig0017414:29569-29588 Msa1361280:intron 40.0%
CTATGGGGATGAGTATTTGA+GGG + tig0017414:29584-29603 Msa1361280:intron 40.0%
CTTTCAATAGCGTGCTATAG+CGG + tig0017414:29842-29861 Msa1361280:intron 40.0%
! TGGCCCATTTGTTAGACATT+AGG - tig0017414:30228-30247 None:intergenic 40.0%
!!! GATATTTTGGCGGTAACAAG+GGG - tig0017414:30538-30557 None:intergenic 40.0%
!!! CGATATTTTGGCGGTAACAA+GGG - tig0017414:30539-30558 None:intergenic 40.0%
!!! TCGATATTTTGGCGGTAACA+AGG - tig0017414:30540-30559 None:intergenic 40.0%
AATTCGTGACGTTGTGTACA+GGG - tig0017414:30952-30971 None:intergenic 40.0%
AAATTCGTGACGTTGTGTAC+AGG - tig0017414:30953-30972 None:intergenic 40.0%
! CTTCAAATCCCTGTGTTTTG+CGG + tig0017414:30997-31016 Msa1361280:intron 40.0%
! TTCAAATCCCTGTGTTTTGC+GGG + tig0017414:30998-31017 Msa1361280:intron 40.0%
CAACTAGTTAAGTTCCAGTG+AGG + tig0017414:31039-31058 Msa1361280:intron 40.0%
GATGCGATTTAGTGTTCTCT+GGG + tig0017414:31075-31094 Msa1361280:intron 40.0%
ATGCGATTTAGTGTTCTCTG+GGG + tig0017414:31076-31095 Msa1361280:intron 40.0%
GCTTAATTTAGCAGAAGGGA+TGG + tig0017414:31115-31134 Msa1361280:intron 40.0%
CTTCGTTTATGTCCTGCAAT+GGG - tig0017414:31180-31199 None:intergenic 40.0%
TCTTCGTTTATGTCCTGCAA+TGG - tig0017414:31181-31200 None:intergenic 40.0%
AACCTCTGCTACCAAAGAAA+GGG - tig0017414:31317-31336 None:intergenic 40.0%
GCTGGGGTCAAATAATGTAT+GGG + tig0017414:31429-31448 Msa1361280:CDS 40.0%
CTGGGGTCAAATAATGTATG+GGG + tig0017414:31430-31449 Msa1361280:CDS 40.0%
TCAAATAATGTATGGGGCGA+AGG + tig0017414:31436-31455 Msa1361280:CDS 40.0%
!! CGATTCCTTTTTAGCCCTTT+GGG + tig0017414:31645-31664 Msa1361280:intron 40.0%
AAATCCAGTGCAATCCCAAA+GGG - tig0017414:31662-31681 None:intergenic 40.0%
TAGAATACGCAAGACTGTCA+CGG + tig0017414:31903-31922 Msa1361280:CDS 40.0%
GATAACGAACATCTTGGTAC+TGG + tig0017414:31976-31995 Msa1361280:CDS 40.0%
CAGCACCAACAATGATAACA+GGG - tig0017414:32071-32090 None:intergenic 40.0%
! CTGTTATCATTGTTGGTGCT+GGG + tig0017414:32070-32089 Msa1361280:CDS 40.0%
!! GATTTTTGAGAGGAAGGATC+AGG + tig0017414:32092-32111 Msa1361280:CDS 40.0%
GTTGAAACCATCGCAAAACA+AGG + tig0017414:32132-32151 Msa1361280:CDS 40.0%
ACTCCCCCAATTGTATCATA+GGG - tig0017414:32543-32562 None:intergenic 40.0%
AACTCCCCCAATTGTATCAT+AGG - tig0017414:32544-32563 None:intergenic 40.0%
! TACCAGGGCATCAAAGATAA+TGG + tig0017414:32719-32738 Msa1361280:CDS 40.0%
TATGTCCCTCAACACATTTG+TGG - tig0017414:33150-33169 None:intergenic 40.0%
!! GCATTTTGACGGGAAGAATT+GGG - tig0017414:33317-33336 Msa1361290:CDS 40.0%
!! AGCATTTTGACGGGAAGAAT+TGG - tig0017414:33318-33337 Msa1361290:CDS 40.0%
! TAAGAGTGTAAGGTGGAAAG+TGG - tig0017414:33614-33633 Msa1361290:CDS 40.0%
TCCACCTTACACTCTTACAA+TGG + tig0017414:33617-33636 Msa1361280:three_prime_UTR 40.0%
TGAAATGGAAGCTGAAAGAG+TGG - tig0017414:33659-33678 None:intergenic 40.0%
AACAGTAATTGACAGGAGCT+AGG - tig0017414:33708-33727 None:intergenic 40.0%
CATGCATAGAGATGCTATCA+AGG + tig0017414:33739-33758 Msa1361280:intron 40.0%
! CTTCTTTTGTTGGGTGTATG+AGG - tig0017414:33931-33950 None:intergenic 40.0%
GAACTATTAGATGAGGTCTG+AGG + tig0017414:34098-34117 Msa1361280:three_prime_UTR 40.0%
AAAACCTCGATAGCGTCATC+GGG - tig0017414:26173-26192 None:intergenic 45.0%
GAAAACCTCGATAGCGTCAT+CGG - tig0017414:26174-26193 None:intergenic 45.0%
CATAGCAGACTTTCCATTGC+TGG + tig0017414:26284-26303 Msa1361280:CDS 45.0%
AGAATCTAACCAGGAAGAGC+GGG - tig0017414:26374-26393 None:intergenic 45.0%
GCCACCTATTGGAGAAAAGA+TGG + tig0017414:26906-26925 Msa1361280:intron 45.0%
TGGTAGAAACTCGGCATATG+TGG + tig0017414:26926-26945 Msa1361280:intron 45.0%
GAAACTCGGCATATGTGGTT+TGG + tig0017414:26931-26950 Msa1361280:intron 45.0%
GAGGATAGTCAGATCACTAG+AGG + tig0017414:27006-27025 Msa1361280:intron 45.0%
AGTCAGATCACTAGAGGTAG+AGG + tig0017414:27012-27031 Msa1361280:intron 45.0%
ATGTAGCCAACCACACTTAG+TGG + tig0017414:27139-27158 Msa1361280:intron 45.0%
TCTCGTGCTTTCTTGGCTAT+AGG - tig0017414:27761-27780 None:intergenic 45.0%
! ATAGCCAAGAAAGCACGAGA+AGG + tig0017414:27761-27780 Msa1361280:CDS 45.0%
CTCCACCCTGATCACAAATT+GGG - tig0017414:27826-27845 None:intergenic 45.0%
TCTCCACCCTGATCACAAAT+TGG - tig0017414:27827-27846 None:intergenic 45.0%
CAGGATCAGTCAATGGCATT+TGG + tig0017414:27857-27876 Msa1361280:CDS 45.0%
CACGGTGCATTCAATGTACA+AGG + tig0017414:27960-27979 Msa1361280:CDS 45.0%
TAGTTTCCGAGGGAACTTAC+GGG + tig0017414:28278-28297 Msa1361280:intron 45.0%
CATCTGGTAGCAATAGGTGT+TGG + tig0017414:28424-28443 Msa1361280:intron 45.0%
GCTCCCAAATGTTGAAGGTT+GGG - tig0017414:28463-28482 None:intergenic 45.0%
TGCGAATCTAACACACCTGT+GGG - tig0017414:28576-28595 None:intergenic 45.0%
ATGCGAATCTAACACACCTG+TGG - tig0017414:28577-28596 None:intergenic 45.0%
GTGTGTTAGATTCGCATCAG+AGG + tig0017414:28580-28599 Msa1361280:CDS 45.0%
GTTCAGGATCTTGGCATGTT+AGG + tig0017414:28611-28630 Msa1361280:CDS 45.0%
CTCATGACAAGTGAACTCTC+TGG + tig0017414:28674-28693 Msa1361280:CDS 45.0%
TTGAAGTGAGTGCTCCTACA+GGG - tig0017414:28718-28737 None:intergenic 45.0%
! TTTGAAGTGAGTGCTCCTAC+AGG - tig0017414:28719-28738 None:intergenic 45.0%
TACTTGCGATCTCAAGCCTT+TGG + tig0017414:29512-29531 Msa1361280:intron 45.0%
CGATCTCAAGCCTTTGGTTA+TGG + tig0017414:29518-29537 Msa1361280:intron 45.0%
ACGCAATTGCCCATAACCAA+AGG - tig0017414:29531-29550 None:intergenic 45.0%
GGTTATGGGCAATTGCGTTA+AGG + tig0017414:29533-29552 Msa1361280:intron 45.0%
TCCCCATAGCATTTACAGAC+TGG - tig0017414:29573-29592 None:intergenic 45.0%
GCTATGGGGATGAGTATTTG+AGG + tig0017414:29583-29602 Msa1361280:intron 45.0%
! GAAGCACCATTGCAGGAAAA+TGG - tig0017414:29901-29920 None:intergenic 45.0%
! CATTGTTGAAGCACCATTGC+AGG - tig0017414:29908-29927 None:intergenic 45.0%
CTGCAATGGTGCTTCAACAA+TGG + tig0017414:29906-29925 Msa1361280:intron 45.0%
!! ATGATAGTGGCCGCAAATAG+CGG + tig0017414:29931-29950 Msa1361280:intron 45.0%
GTTTCTTCACAACATGAGGG+TGG - tig0017414:30019-30038 None:intergenic 45.0%
TGACTGATGTAGTGTTGCAG+AGG + tig0017414:30089-30108 Msa1361280:intron 45.0%
GACTTGGGAATCTATGCACA+TGG - tig0017414:30929-30948 None:intergenic 45.0%
ATTCGTGACGTTGTGTACAG+GGG - tig0017414:30951-30970 None:intergenic 45.0%
! TCAAATCCCTGTGTTTTGCG+GGG + tig0017414:30999-31018 Msa1361280:intron 45.0%
TTGATTCCCCGCAAAACACA+GGG - tig0017414:31008-31027 None:intergenic 45.0%
CGATGCGATTTAGTGTTCTC+TGG + tig0017414:31074-31093 Msa1361280:intron 45.0%
TTGTTCCACTTTCCCATTGC+AGG + tig0017414:31165-31184 Msa1361280:intron 45.0%
TATGTCCTGCAATGGGAAAG+TGG - tig0017414:31173-31192 None:intergenic 45.0%
TGCAGGACATAAACGAAGAG+TGG + tig0017414:31182-31201 Msa1361280:intron 45.0%
ATGATGGTTTGAAGAGGCAG+AGG + tig0017414:31230-31249 Msa1361280:CDS 45.0%
CATCAGGACCACGAATCATA+GGG - tig0017414:31264-31283 None:intergenic 45.0%
CAACCTCTGCTACCAAAGAA+AGG - tig0017414:31318-31337 None:intergenic 45.0%
GGCTGGGGTCAAATAATGTA+TGG + tig0017414:31428-31447 Msa1361280:CDS 45.0%
AATGTATGGGGCGAAGGAAT+TGG + tig0017414:31442-31461 Msa1361280:CDS 45.0%
GAAAGCAGATGCTTTCCTGT+TGG + tig0017414:31528-31547 Msa1361280:CDS 45.0%
!! GCGATTCCTTTTTAGCCCTT+TGG + tig0017414:31644-31663 Msa1361280:intron 45.0%
GCAATCCCAAAGGGCTAAAA+AGG - tig0017414:31653-31672 None:intergenic 45.0%
GAAATCCAGTGCAATCCCAA+AGG - tig0017414:31663-31682 None:intergenic 45.0%
CACTTCCAAATTTGCAGCCA+CGG + tig0017414:31857-31876 Msa1361280:intron 45.0%
ACTTCCAAATTTGCAGCCAC+GGG + tig0017414:31858-31877 Msa1361280:intron 45.0%
AAGCCAAGGTCGGTTACATT+GGG + tig0017414:31932-31951 Msa1361280:CDS 45.0%
CCAGCACCAACAATGATAAC+AGG - tig0017414:32072-32091 None:intergenic 45.0%
CCTGTTATCATTGTTGGTGC+TGG + tig0017414:32069-32088 Msa1361280:CDS 45.0%
!!! TTGGTGCTGGGATTTTTGAG+AGG + tig0017414:32082-32101 Msa1361280:CDS 45.0%
!! TGCTGGGATTTTTGAGAGGA+AGG + tig0017414:32086-32105 Msa1361280:CDS 45.0%
!!! GACATTCCCTTGTTTTGCGA+TGG - tig0017414:32142-32161 None:intergenic 45.0%
GGAATGTCGTCAGATCTGAT+TGG + tig0017414:32154-32173 Msa1361280:CDS 45.0%
GTCGTCAGATCTGATTGGAA+TGG + tig0017414:32159-32178 Msa1361280:CDS 45.0%
GGGAGCTGATGATACAAACT+TGG + tig0017414:32287-32306 Msa1361280:CDS 45.0%
AAACTTGGACAAGATCCCGA+AGG + tig0017414:32302-32321 Msa1361280:CDS 45.0%
AAGGATGCACACAGCAAACA+TGG + tig0017414:32436-32455 Msa1361280:CDS 45.0%
TTGGAGACTCCAGAGATGAT+TGG + tig0017414:32475-32494 Msa1361280:CDS 45.0%
!! AAGGTTGGTCTCAGTGAAGA+TGG - tig0017414:32633-32652 None:intergenic 45.0%
GAGACCAACCTTCACTAAGA+AGG + tig0017414:32641-32660 Msa1361280:CDS 45.0%
ACCAACCTTCACTAAGAAGG+TGG + tig0017414:32644-32663 Msa1361280:CDS 45.0%
TCCACCTTCTTAGTGAAGGT+TGG - tig0017414:32648-32667 None:intergenic 45.0%
TGGATCCACCTTCTTAGTGA+AGG - tig0017414:32652-32671 None:intergenic 45.0%
AAGGTGGATCCATCACCATT+CGG + tig0017414:32660-32679 Msa1361280:CDS 45.0%
AGCCATTATCTTTGATGCCC+TGG - tig0017414:32724-32743 None:intergenic 45.0%
GGACTAACCCGAATTGTACA+TGG - tig0017414:32965-32984 None:intergenic 45.0%
TTGGATTGCACATGCTTCCA+AGG - tig0017414:33027-33046 None:intergenic 45.0%
!! GGTGCTGCTTCATATACTCT+AGG - tig0017414:33129-33148 None:intergenic 45.0%
CAGCACCACAAATGTGTTGA+GGG + tig0017414:33142-33161 Msa1361280:three_prime_UTR 45.0%
!! TCATTCAGGTGTGTTGACTC+TGG - tig0017414:33364-33383 Msa1361290:CDS 45.0%
ATGGGGTTGCAGTTTCATTC+AGG - tig0017414:33378-33397 Msa1361290:CDS 45.0%
AATGAAACTGCAACCCCATC+TGG + tig0017414:33379-33398 Msa1361280:three_prime_UTR 45.0%
ATGAAACTGCAACCCCATCT+GGG + tig0017414:33380-33399 Msa1361280:three_prime_UTR 45.0%
! GCCATTGTAAGAGTGTAAGG+TGG - tig0017414:33621-33640 Msa1361290:CDS 45.0%
! GCTGCCATTGTAAGAGTGTA+AGG - tig0017414:33624-33643 Msa1361290:CDS 45.0%
CGGTGTTCATACTTGAGACA+TGG + tig0017414:33809-33828 Msa1361280:intron 45.0%
AAGGAAAGTAACTCACCGGA+TGG + tig0017414:34037-34056 Msa1361280:intron 45.0%
!! TATATATATATATATAAAAG+TGG + tig0017414:28235-28254 Msa1361280:intron 5.0%
GGTGATGCGAGTGTATATGG+AGG - tig0017414:25911-25930 None:intergenic 50.0%
TCCACCCTAACAATGGGGTT+TGG + tig0017414:25963-25982 Msa1361280:exon 50.0%
ACCAAACCCCATTGTTAGGG+TGG - tig0017414:25967-25986 None:intergenic 50.0%
!! GTTTGGTGGTGATTGAACGG+AGG - tig0017414:26043-26062 None:intergenic 50.0%
!! CGGGTTTGGTGGTGATTGAA+CGG - tig0017414:26046-26065 None:intergenic 50.0%
!! ACGAGAGGTTGTTCAGGTTG+GGG - tig0017414:26098-26117 None:intergenic 50.0%
! GACGAGAGGTTGTTCAGGTT+GGG - tig0017414:26099-26118 None:intergenic 50.0%
AGATCGACGAGAGGTTGTTC+AGG - tig0017414:26104-26123 None:intergenic 50.0%
TCGATAGCGTCATCGGGATT+GGG - tig0017414:26167-26186 None:intergenic 50.0%
! GCTATCGAGGTTTTCGTCGA+TGG + tig0017414:26179-26198 Msa1361280:CDS 50.0%
CTCTGTTCTTCAAGCGTGTG+AGG + tig0017414:26229-26248 Msa1361280:CDS 50.0%
CACTCCTTCTCGTGCTTTCT+TGG - tig0017414:27768-27787 None:intergenic 50.0%
! GAAAGCACGAGAAGGAGTGA+TGG + tig0017414:27769-27788 Msa1361280:CDS 50.0%
TGCCCAATTTGTGATCAGGG+TGG + tig0017414:27821-27840 Msa1361280:CDS 50.0%
!! ATGGCATTTGGCTCTGATCG+TGG + tig0017414:27869-27888 Msa1361280:CDS 50.0%
AGTTGACCCGTAAGTTCCCT+CGG - tig0017414:28287-28306 None:intergenic 50.0%
ACTTGCTCTCATGTCAGCTC+AGG + tig0017414:28367-28386 Msa1361280:intron 50.0%
CTTGCTCTCATGTCAGCTCA+GGG + tig0017414:28368-28387 Msa1361280:intron 50.0%
GGCTCCCAAATGTTGAAGGT+TGG - tig0017414:28464-28483 None:intergenic 50.0%
GGATGGCTCCCAAATGTTGA+AGG - tig0017414:28468-28487 None:intergenic 50.0%
AGATTCGCATCAGAGGTTGC+AGG + tig0017414:28587-28606 Msa1361280:CDS 50.0%
GATTCGCATCAGAGGTTGCA+GGG + tig0017414:28588-28607 Msa1361280:CDS 50.0%
ATTCGCATCAGAGGTTGCAG+GGG + tig0017414:28589-28608 Msa1361280:CDS 50.0%
GATCTTGGCATGTTAGGTCG+TGG + tig0017414:28617-28636 Msa1361280:CDS 50.0%
!! CGTGGTAGTGGAGAAGAGAT+TGG + tig0017414:28635-28654 Msa1361280:CDS 50.0%
GGAACAATGCGCATGACTTC+AGG - tig0017414:28842-28861 None:intergenic 50.0%
AAGATAGGGTCGCAGTGAAC+AGG + tig0017414:29753-29772 Msa1361280:intron 50.0%
AGATAGGGTCGCAGTGAACA+GGG + tig0017414:29754-29773 Msa1361280:intron 50.0%
TGCAGGAAAATGGCTTCGCA+GGG - tig0017414:29891-29910 None:intergenic 50.0%
TTGCAGGAAAATGGCTTCGC+AGG - tig0017414:29892-29911 None:intergenic 50.0%
!! GCGAAGCCATTTTCCTGCAA+TGG + tig0017414:29892-29911 Msa1361280:intron 50.0%
CGTGTTTCCACCGCTATTTG+CGG - tig0017414:29944-29963 None:intergenic 50.0%
GTGGAAACACGACTCAATCG+CGG + tig0017414:29953-29972 Msa1361280:intron 50.0%
TGGAAACACGACTCAATCGC+GGG + tig0017414:29954-29973 Msa1361280:intron 50.0%
GACGAAAATATGCAGGGGCA+CGG + tig0017414:30066-30085 Msa1361280:intron 50.0%
!!! AGTGTTGCAGAGGTGCCTTT+TGG + tig0017414:30099-30118 Msa1361280:intron 50.0%
! GAAATTTCTGGATCCGTCCC+TGG + tig0017414:30879-30898 Msa1361280:intron 50.0%
ACGTTGTGTACAGGGGACTT+GGG - tig0017414:30944-30963 None:intergenic 50.0%
! GTTGATTCCCCGCAAAACAC+AGG - tig0017414:31009-31028 None:intergenic 50.0%
CCATCAGGACCACGAATCAT+AGG - tig0017414:31265-31284 None:intergenic 50.0%
CCTATGATTCGTGGTCCTGA+TGG + tig0017414:31262-31281 Msa1361280:CDS 50.0%
GCCAGTTCACAGGCTTAAAG+CGG - tig0017414:31288-31307 None:intergenic 50.0%
! AGCCCTTTCTTTGGTAGCAG+AGG + tig0017414:31312-31331 Msa1361280:CDS 50.0%
GCAGATGCTTTCCTGTTGGT+TGG + tig0017414:31532-31551 Msa1361280:CDS 50.0%
!! TTAGCCCTTTGGGATTGCAC+TGG + tig0017414:31655-31674 Msa1361280:intron 50.0%
CAATGTAACCGACCTTGGCT+TGG - tig0017414:31933-31952 None:intergenic 50.0%
CAAGCCAAGGTCGGTTACAT+TGG + tig0017414:31931-31950 Msa1361280:CDS 50.0%
ATTACTTCTCCATGCTGCCC+AGG + tig0017414:32191-32210 Msa1361280:CDS 50.0%
TTCTCACTGAATGCAGCTGC+TGG - tig0017414:32393-32412 None:intergenic 50.0%
AGCAGCTGCATTCAGTGAGA+AGG + tig0017414:32392-32411 Msa1361280:CDS 50.0%
GCTGCATTCAGTGAGAAGGA+AGG + tig0017414:32396-32415 Msa1361280:CDS 50.0%
TCTCCAACTGTTGGAACTGC+AGG - tig0017414:32462-32481 None:intergenic 50.0%
!! TCTCTGGAGTCTCCAACTGT+TGG - tig0017414:32471-32490 None:intergenic 50.0%
TAAACGCACCCCTGCTATCT+CGG - tig0017414:32520-32539 None:intergenic 50.0%
TCGTCCATTTGCGCAAGGTT+TGG - tig0017414:32591-32610 None:intergenic 50.0%
AGTGAAGATGGCAATGCAGC+TGG - tig0017414:32621-32640 None:intergenic 50.0%
AGGTGGATCCATCACCATTC+GGG + tig0017414:32661-32680 Msa1361280:CDS 50.0%
TCCATCACCATTCGGGATTG+CGG + tig0017414:32668-32687 Msa1361280:CDS 50.0%
TTCTCAACCGCAATCCCGAA+TGG - tig0017414:32678-32697 None:intergenic 50.0%
CTTGCTTGCGGAAAGCTTCT+CGG + tig0017414:32849-32868 Msa1361280:three_prime_UTR 50.0%
GCAGCACCACAAATGTGTTG+AGG + tig0017414:33141-33160 Msa1361280:three_prime_UTR 50.0%
ATCCACGCTCAAACCCAGAT+GGG - tig0017414:33396-33415 Msa1361290:CDS 50.0%
TATCCACGCTCAAACCCAGA+TGG - tig0017414:33397-33416 Msa1361290:CDS 50.0%
TCCTTCCAGTGTGGTGGTAT+GGG - tig0017414:33587-33606 Msa1361290:CDS 50.0%
GAAAGAGTGGTGCATACAGG+AGG - tig0017414:33646-33665 Msa1361290:CDS 50.0%
GCTGAAAGAGTGGTGCATAC+AGG - tig0017414:33649-33668 Msa1361290:CDS 50.0%
ACTCACCGGATGGAATGAGA+TGG + tig0017414:34047-34066 Msa1361280:intron 50.0%
CTCACCGGATGGAATGAGAT+GGG + tig0017414:34048-34067 Msa1361280:intron 50.0%
TCACCGGATGGAATGAGATG+GGG + tig0017414:34049-34068 Msa1361280:intron 50.0%
TGAGATGGGGCGGTAGAAAT+CGG + tig0017414:34062-34081 Msa1361280:three_prime_UTR 50.0%
!! GGTGGTGGTGGTTTGACGAA+AGG - tig0017414:26006-26025 None:intergenic 55.0%
TGATTGAACGGAGGAGGAGG+AGG - tig0017414:26034-26053 None:intergenic 55.0%
TGGTGATTGAACGGAGGAGG+AGG - tig0017414:26037-26056 None:intergenic 55.0%
! TGGTGGTGATTGAACGGAGG+AGG - tig0017414:26040-26059 None:intergenic 55.0%
! TTTGCGGAGTTCGGGTTTGG+TGG - tig0017414:26057-26076 None:intergenic 55.0%
!! TTGTTCAGGTTGGGGCTGAG+CGG - tig0017414:26090-26109 None:intergenic 55.0%
CGACGAGAGGTTGTTCAGGT+TGG - tig0017414:26100-26119 None:intergenic 55.0%
ATGTACTCTAGCGCCAGCGA+CGG - tig0017414:26141-26160 None:intergenic 55.0%
CGATAGCGTCATCGGGATTG+GGG - tig0017414:26166-26185 None:intergenic 55.0%
CTCGATAGCGTCATCGGGAT+TGG - tig0017414:26168-26187 None:intergenic 55.0%
CAATCCCGATGACGCTATCG+AGG + tig0017414:26166-26185 Msa1361280:CDS 55.0%
CTTCAAGCGTGTGAGGTTGC+TGG + tig0017414:26236-26255 Msa1361280:CDS 55.0%
GCGCAAGAAGCAACAGGCTT+AGG - tig0017414:26347-26366 None:intergenic 55.0%
GAGTTGGGGTAGCCACCTAT+TGG + tig0017414:26895-26914 Msa1361280:intron 55.0%
! GGGTGGAGAGTGTGATCTTC+AGG + tig0017414:27838-27857 Msa1361280:CDS 55.0%
ATCAGAGGTTGCAGGGGTTC+AGG + tig0017414:28595-28614 Msa1361280:CDS 55.0%
GTTGCAGGGGTTCAGGATCT+TGG + tig0017414:28602-28621 Msa1361280:CDS 55.0%
GGCATGTTAGGTCGTGGTAG+TGG + tig0017414:28623-28642 Msa1361280:CDS 55.0%
! CGTGCTATAGCGGAATAGCG+TGG + tig0017414:29852-29871 Msa1361280:intron 55.0%
! ATAGCGGAATAGCGTGGCGA+AGG + tig0017414:29858-29877 Msa1361280:intron 55.0%
GCAGGAAAATGGCTTCGCAG+GGG - tig0017414:29890-29909 None:intergenic 55.0%
ATAGTGGCCGCAAATAGCGG+TGG + tig0017414:29934-29953 Msa1361280:intron 55.0%
TGAGGGTGGTAGCCGGAAAA+CGG - tig0017414:30005-30024 None:intergenic 55.0%
CACAACATGAGGGTGGTAGC+CGG - tig0017414:30012-30031 None:intergenic 55.0%
TCTCCCAAGTCTCACTGCCA+GGG - tig0017414:30899-30918 None:intergenic 55.0%
GACGTTGTGTACAGGGGACT+TGG - tig0017414:30945-30964 None:intergenic 55.0%
ACAGGCTTAAAGCGGCCATC+AGG - tig0017414:31280-31299 None:intergenic 55.0%
! GCCGCTTTAAGCCTGTGAAC+TGG + tig0017414:31284-31303 Msa1361280:CDS 55.0%
CTGGCGTGAAGCCCTTTCTT+TGG + tig0017414:31303-31322 Msa1361280:CDS 55.0%
! TTTCCTGTTGGTTGGCACCC+AGG + tig0017414:31540-31559 Msa1361280:CDS 55.0%
ATACCTGGGTGCCAACCAAC+AGG - tig0017414:31546-31565 None:intergenic 55.0%
TCCAAATTTGCAGCCACGGG+TGG + tig0017414:31861-31880 Msa1361280:intron 55.0%
TCCACCCGTGGCTGCAAATT+TGG - tig0017414:31865-31884 None:intergenic 55.0%
TGTCACGGCAAACCAAGCCA+AGG + tig0017414:31918-31937 Msa1361280:CDS 55.0%
ACGGCAAACCAAGCCAAGGT+CGG + tig0017414:31922-31941 Msa1361280:CDS 55.0%
AGGCCCAATGTAACCGACCT+TGG - tig0017414:31938-31957 None:intergenic 55.0%
AAGGTCAAGTGCAGCAGCCT+GGG - tig0017414:32211-32230 None:intergenic 55.0%
CAGATTGGGGCACAAGTCCA+AGG - tig0017414:32230-32249 None:intergenic 55.0%
TGGCCTGCAGTTCCAACAGT+TGG + tig0017414:32456-32475 Msa1361280:CDS 55.0%
GAGCTCTGTCCGAGATAGCA+GGG + tig0017414:32508-32527 Msa1361280:CDS 55.0%
AGCTCTGTCCGAGATAGCAG+GGG + tig0017414:32509-32528 Msa1361280:CDS 55.0%
TTGGCGCTACAGTCCTCAGT+CGG - tig0017414:32572-32591 None:intergenic 55.0%
AGCGCCAAACCTTGCGCAAA+TGG + tig0017414:32584-32603 Msa1361280:CDS 55.0%
CTCTCTCGTCCATTTGCGCA+AGG - tig0017414:32596-32615 None:intergenic 55.0%
ACCGCAATCCCGAATGGTGA+TGG - tig0017414:32672-32691 None:intergenic 55.0%
AAGCAAGGTCTTGCTTGGCC+AGG - tig0017414:32836-32855 None:intergenic 55.0%
GCCAAGCAAGACCTTGCTTG+CGG + tig0017414:32837-32856 Msa1361280:three_prime_UTR 55.0%
TCCGCAAGCAAGGTCTTGCT+TGG - tig0017414:32841-32860 None:intergenic 55.0%
CGAGAAGCTTTCCGCAAGCA+AGG - tig0017414:32851-32870 None:intergenic 55.0%
TCCACGCTCAAACCCAGATG+GGG - tig0017414:33395-33414 Msa1361290:CDS 55.0%
TCCCATACCACCACACTGGA+AGG + tig0017414:33583-33602 Msa1361280:three_prime_UTR 55.0%
CTCCTTCCAGTGTGGTGGTA+TGG - tig0017414:33588-33607 Msa1361290:CDS 55.0%
TTGAACGGAGGAGGAGGAGG+CGG - tig0017414:26031-26050 None:intergenic 60.0%
! GGGTTTGCGGAGTTCGGGTT+TGG - tig0017414:26060-26079 None:intergenic 60.0%
! GGTTCGGGTTTGCGGAGTTC+GGG - tig0017414:26065-26084 None:intergenic 60.0%
! GGGTTCGGGTTTGCGGAGTT+CGG - tig0017414:26066-26085 None:intergenic 60.0%
TGTACTCTAGCGCCAGCGAC+GGG - tig0017414:26140-26159 None:intergenic 60.0%
GGCATGGCGCAAGAAGCAAC+AGG - tig0017414:26353-26372 None:intergenic 60.0%
CTAACCAGGAAGAGCGGGCA+TGG - tig0017414:26369-26388 None:intergenic 60.0%
ATGTCAGCTCAGGGCCAGCT+AGG + tig0017414:28377-28396 Msa1361280:intron 60.0%
AGGGTCGCAGTGAACAGGGA+CGG + tig0017414:29758-29777 Msa1361280:intron 60.0%
CGGGTTCACGTCCGCTTCTA+GGG + tig0017414:29973-29992 Msa1361280:intron 60.0%
AACGGCAGGAGCCCTAGAAG+CGG - tig0017414:29987-30006 None:intergenic 60.0%
!!! CTAGGGCTCCTGCCGTTTTC+CGG + tig0017414:29990-30009 Msa1361280:intron 60.0%
CCAAGTCTCACTGCCAGGGA+CGG - tig0017414:30895-30914 None:intergenic 60.0%
CGTCCCTGGCAGTGAGACTT+GGG + tig0017414:30893-30912 Msa1361280:intron 60.0%
CTCTCCCAAGTCTCACTGCC+AGG - tig0017414:30900-30919 None:intergenic 60.0%
AGGGCTTCACGCCAGTTCAC+AGG - tig0017414:31298-31317 None:intergenic 60.0%
ACCATAGCAGCTTCCACCCG+TGG - tig0017414:31877-31896 None:intergenic 60.0%
CAAGGTCAAGTGCAGCAGCC+TGG - tig0017414:32212-32231 None:intergenic 60.0%
CAGGCTGCTGCACTTGACCT+TGG + tig0017414:32210-32229 Msa1361280:CDS 60.0%
CGAGCTCTGTCCGAGATAGC+AGG + tig0017414:32507-32526 Msa1361280:CDS 60.0%
TGGCGCTACAGTCCTCAGTC+GGG - tig0017414:32571-32590 None:intergenic 60.0%
GCGGAAAGCTTCTCGGACGT+TGG + tig0017414:32856-32875 Msa1361280:three_prime_UTR 60.0%
ACCCCATCTGGGTTTGAGCG+TGG + tig0017414:33391-33410 Msa1361280:three_prime_UTR 60.0%
GCAGTCCCATACCACCACAC+TGG + tig0017414:33579-33598 Msa1361280:three_prime_UTR 60.0%
AGTGGCTGCTCCTTCCAGTG+TGG - tig0017414:33596-33615 Msa1361290:CDS 60.0%
CCGCCCCATCTCATTCCATC+CGG - tig0017414:34055-34074 None:intergenic 60.0%
CCGGATGGAATGAGATGGGG+CGG + tig0017414:34052-34071 Msa1361280:intron 60.0%
TGAACGGAGGAGGAGGAGGC+GGG - tig0017414:26030-26049 None:intergenic 65.0%
!! TTCAGGTTGGGGCTGAGCGG+CGG - tig0017414:26087-26106 None:intergenic 65.0%
CGGGGAGTGAGATCGACGAG+AGG - tig0017414:26113-26132 None:intergenic 65.0%
TAGCGCCAGCGACGGGTGTA+CGG - tig0017414:26133-26152 None:intergenic 65.0%
GCGGAATAGCGTGGCGAAGG+AGG + tig0017414:29861-29880 Msa1361280:intron 65.0%
GCGGGTTCACGTCCGCTTCT+AGG + tig0017414:29972-29991 Msa1361280:intron 65.0%
GGTGGTAGCCGGAAAACGGC+AGG - tig0017414:30001-30020 None:intergenic 65.0%
CCGTCCCTGGCAGTGAGACT+TGG + tig0017414:30892-30911 Msa1361280:intron 65.0%
GCCACGGGTGGAAGCTGCTA+TGG + tig0017414:31873-31892 Msa1361280:intron 65.0%
GGCTGCTCCTTCCAGTGTGG+TGG - tig0017414:33593-33612 Msa1361290:CDS 65.0%
! GAGCGGCGGGTTCGGGTTTG+CGG - tig0017414:26073-26092 None:intergenic 70.0%
! TTGGGGCTGAGCGGCGGGTT+CGG - tig0017414:26081-26100 None:intergenic 70.0%
!! TCAGGTTGGGGCTGAGCGGC+GGG - tig0017414:26086-26105 None:intergenic 70.0%
ACTCCCCGTACACCCGTCGC+TGG + tig0017414:26125-26144 Msa1361280:CDS 70.0%
AGCGCCAGCGACGGGTGTAC+GGG - tig0017414:26132-26151 None:intergenic 70.0%
TGCGCCATGCCCGCTCTTCC+TGG + tig0017414:26362-26381 Msa1361280:CDS 70.0%
GTGCAGCAGCCTGGGCAGCA+TGG - tig0017414:32203-32222 None:intergenic 70.0%
!! GAGGAGGCGGGTGGTGGTGG+TGG - tig0017414:26018-26037 None:intergenic 75.0%
! GAGGAGGAGGCGGGTGGTGG+TGG - tig0017414:26021-26040 None:intergenic 75.0%
GAGGAGGAGGAGGCGGGTGG+TGG - tig0017414:26024-26043 None:intergenic 75.0%
ACGGAGGAGGAGGAGGCGGG+TGG - tig0017414:26027-26046 None:intergenic 75.0%
! TGGGGCTGAGCGGCGGGTTC+GGG - tig0017414:26080-26099 None:intergenic 75.0%
GCGCCAGCGACGGGTGTACG+GGG - tig0017414:26131-26150 None:intergenic 75.0%
GGGGAGTTCGCGCCCGACTG+AGG + tig0017414:32556-32575 Msa1361280:CDS 75.0%
Chromosome Type Strat End Strand Name
tig0017414 gene 25832 34139 25832 ID=Msa1361280;Name=Msa1361280
tig0017414 mRNA 25832 34139 25832 ID=Msa1361280-mRNA-1;Parent=Msa1361280;Name=Msa1361280-mRNA-1;_AED=0.00;_eAED=0.00;_QI=143|1|1|1|0.8|0.66|6|1026|741
tig0017414 exon 25832 26383 25832 ID=Msa1361280-mRNA-1:exon:12323;Parent=Msa1361280-mRNA-1
tig0017414 exon 27735 27981 27735 ID=Msa1361280-mRNA-1:exon:12324;Parent=Msa1361280-mRNA-1
tig0017414 exon 28580 28874 28580 ID=Msa1361280-mRNA-1:exon:12325;Parent=Msa1361280-mRNA-1
tig0017414 exon 31187 31561 31187 ID=Msa1361280-mRNA-1:exon:12326;Parent=Msa1361280-mRNA-1
tig0017414 exon 31874 33714 31874 ID=Msa1361280-mRNA-1:exon:12327;Parent=Msa1361280-mRNA-1
tig0017414 exon 34055 34139 34055 ID=Msa1361280-mRNA-1:exon:12328;Parent=Msa1361280-mRNA-1
tig0017414 five_prime_UTR 25832 25974 25832 ID=Msa1361280-mRNA-1:five_prime_utr;Parent=Msa1361280-mRNA-1
tig0017414 CDS 25975 26383 25975 ID=Msa1361280-mRNA-1:cds;Parent=Msa1361280-mRNA-1
tig0017414 CDS 27735 27981 27735 ID=Msa1361280-mRNA-1:cds;Parent=Msa1361280-mRNA-1
tig0017414 CDS 28580 28874 28580 ID=Msa1361280-mRNA-1:cds;Parent=Msa1361280-mRNA-1
tig0017414 CDS 31187 31561 31187 ID=Msa1361280-mRNA-1:cds;Parent=Msa1361280-mRNA-1
tig0017414 CDS 31874 32773 31874 ID=Msa1361280-mRNA-1:cds;Parent=Msa1361280-mRNA-1
tig0017414 three_prime_UTR 32774 33714 32774 ID=Msa1361280-mRNA-1:three_prime_utr;Parent=Msa1361280-mRNA-1
tig0017414 three_prime_UTR 34055 34139 34055 ID=Msa1361280-mRNA-1:three_prime_utr;Parent=Msa1361280-mRNA-1
Gene Sequence

>Msa1361280

ATGGGGTTTGGTTTATTAGCTTCAAAGACCTTTCGTCAAACCACCACCACCACCCGCCTCCTCCTCCTCCGTTCAATCACCACCAAACCCGAACTCCGCAAACCCGAACCCGCCGCTCAGCCCCAACCTGAACAACCTCTCGTCGATCTCACTCCCCGTACACCCGTCGCTGGCGCTAGAGTACATTTCCCCAATCCCGATGACGCTATCGAGGTTTTCGTCGATGGATACCCCGTTAAAATTCCGAAAGGATTCTCTGTTCTTCAAGCGTGTGAGGTTGCTGGTGTTGATATTCCTAGATTTTGTTATCATAGCAGACTTTCCATTGCTGGAAATTGTCGTATGTGTCTTGTTGAGGTTGAGAAATCTCCTAAGCCTGTTGCTTCTTGCGCCATGCCCGCTCTTCCTGGGATGAAAATCAAGACTGACACACCTATAGCCAAGAAAGCACGAGAAGGAGTGATGGAGTTTTTATTGATGAATCATCCATTAGATTGCCCAATTTGTGATCAGGGTGGAGAGTGTGATCTTCAGGATCAGTCAATGGCATTTGGCTCTGATCGTGGTCGTTTCACTGATATGAAGAGATCTGTGGTGGATAAAAATCTTGGACCTTTGGTAAAGACTGTGATGACACGGTGCATTCAATGTACAAGGTGTGTTAGATTCGCATCAGAGGTTGCAGGGGTTCAGGATCTTGGCATGTTAGGTCGTGGTAGTGGAGAAGAGATTGGAACATATGTTGAAAAACTCATGACAAGTGAACTCTCTGGAAATGTAATAGATATCTGCCCTGTAGGAGCACTCACTTCAAAACCTTTTGCATTTAAAGCCCGGAATTGGGAGTTGAAGAATACAGAGACCATTGATGTTACTGATGCTGTTGGTTCCAATATTCGAATTGATAGCAGAGGACCTGAAGTCATGCGCATTGTTCCTCGTTTAAATGAGGACATAAACGAAGAGTGGATTTCAGACAAAACCCGCTTTTGTTATGATGGTTTGAAGAGGCAGAGGTTAAATGACCCTATGATTCGTGGTCCTGATGGCCGCTTTAAGCCTGTGAACTGGCGTGAAGCCCTTTCTTTGGTAGCAGAGGTTGTGCATCAAGTTAAACCAGAAGAAATTGTTGGAATATCTGGCAAACTTTCTGATGCTGAGTCCATGATTGCACTAAAAGATTTCTTAAACAGGCTGGGGTCAAATAATGTATGGGGCGAAGGAATTGGCGTAAATACTAATGCTGATTTCAGATCAGGATATATTATGAATACTAGCATTGCTGGTCTTGAGAAAGCAGATGCTTTCCTGTTGGTTGGCACCCAGCCACGGGTGGAAGCTGCTATGGTTAATGCTAGAATACGCAAGACTGTCACGGCAAACCAAGCCAAGGTCGGTTACATTGGGCCTGCTACTGATTTTAACTATGATAACGAACATCTTGGTACTGGTCCTCAAACACTTCTTGAAATTGCTGAGGGTCGACACCCATTTTCCAAGACTATTTCAAATGCCAAAAACCCTGTTATCATTGTTGGTGCTGGGATTTTTGAGAGGAAGGATCAGGATGCAATTTTTGCAGCTGTTGAAACCATCGCAAAACAAGGGAATGTCGTCAGATCTGATTGGAATGGCCTTAATGTATTACTTCTCCATGCTGCCCAGGCTGCTGCACTTGACCTTGGACTTGTGCCCCAATCTGAAAAAAGCCTTGAATCTGCAAAGTTTGTATATTTAATGGGAGCTGATGATACAAACTTGGACAAGATCCCGAAGGATGCTTTTGTTGTTTATCAAGGTCATCATGGTGATAAGAGTGTTTATCGTGCTAATGTCATTTTGCCAGCAGCTGCATTCAGTGAGAAGGAAGGTACATATGAAAATACTGAAGGATGCACACAGCAAACATGGCCTGCAGTTCCAACAGTTGGAGACTCCAGAGATGATTGGAAGATAATTCGAGCTCTGTCCGAGATAGCAGGGGTGCGTTTACCCTATGATACAATTGGGGGAGTTCGCGCCCGACTGAGGACTGTAGCGCCAAACCTTGCGCAAATGGACGAGAGAGAACCAGCTGCATTGCCATCTTCACTGAGACCAACCTTCACTAAGAAGGTGGATCCATCACCATTCGGGATTGCGGTTGAGAATTTCTATATGACTGATGCAATTACCAGGGCATCAAAGATAATGGCTCAATGCAGTGCTATGCTGTTGAAGAAATGA
Protein sequence

>Msa1361280

MGFGLLASKTFRQTTTTTRLLLLRSITTKPELRKPEPAAQPQPEQPLVDLTPRTPVAGARVHFPNPDDAIEVFVDGYPVKIPKGFSVLQACEVAGVDIPRFCYHSRLSIAGNCRMCLVEVEKSPKPVASCAMPALPGMKIKTDTPIAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRGRFTDMKRSVVDKNLGPLVKTVMTRCIQCTRCVRFASEVAGVQDLGMLGRGSGEEIGTYVEKLMTSELSGNVIDICPVGALTSKPFAFKARNWELKNTETIDVTDAVGSNIRIDSRGPEVMRIVPRLNEDINEEWISDKTRFCYDGLKRQRLNDPMIRGPDGRFKPVNWREALSLVAEVVHQVKPEEIVGISGKLSDAESMIALKDFLNRLGSNNVWGEGIGVNTNADFRSGYIMNTSIAGLEKADAFLLVGTQPRVEAAMVNARIRKTVTANQAKVGYIGPATDFNYDNEHLGTGPQTLLEIAEGRHPFSKTISNAKNPVIIVGAGIFERKDQDAIFAAVETIAKQGNVVRSDWNGLNVLLLHAAQAAALDLGLVPQSEKSLESAKFVYLMGADDTNLDKIPKDAFVVYQGHHGDKSVYRANVILPAAAFSEKEGTYENTEGCTQQTWPAVPTVGDSRDDWKIIRALSEIAGVRLPYDTIGGVRARLRTVAPNLAQMDEREPAALPSSLRPTFTKKVDPSPFGIAVENFYMTDAITRASKIMAQCSAMLLKK*