Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0528020 | XP_003600690.1 | 98.077 | 312 | 4 | 1 | 1 | 312 | 1 | 310 | 0.0 | 630 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0528020 | sp|Q9FGI6|NDUS1_ARATH | 86.076 | 316 | 40 | 1 | 1 | 312 | 1 | 316 | 0.0 | 565 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0528020 | G7J8R4 | 98.077 | 312 | 4 | 1 | 1 | 312 | 1 | 310 | 0.0 | 630 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0030150 | Msa0528020 | 0.816952 | 4.241664e-52 | -8.615850e-47 |
| Msa0054730 | Msa0528020 | 0.801670 | 8.071708e-49 | -8.615850e-47 |
| Msa0057680 | Msa0528020 | 0.802639 | 5.098752e-49 | -8.615850e-47 |
| Msa0063350 | Msa0528020 | 0.805591 | 1.239508e-49 | -8.615850e-47 |
| Msa0076320 | Msa0528020 | -0.811577 | 6.530007e-51 | -8.615850e-47 |
| Msa0125640 | Msa0528020 | 0.805498 | 1.296585e-49 | -8.615850e-47 |
| Msa0136890 | Msa0528020 | 0.828311 | 9.648193e-55 | -8.615850e-47 |
| Msa0137710 | Msa0528020 | 0.824438 | 8.071544e-54 | -8.615850e-47 |
| Msa0170110 | Msa0528020 | 0.822589 | 2.184768e-53 | -8.615850e-47 |
| Msa0233630 | Msa0528020 | 0.829425 | 5.183844e-55 | -8.615850e-47 |
| Msa0367950 | Msa0528020 | 0.808206 | 3.470501e-50 | -8.615850e-47 |
| Msa0389610 | Msa0528020 | 0.857281 | 1.816496e-62 | -8.615850e-47 |
| Msa0412840 | Msa0528020 | -0.805003 | 1.646109e-49 | -8.615850e-47 |
| Msa0457510 | Msa0528020 | -0.819534 | 1.104484e-52 | -8.615850e-47 |
| Msa0460400 | Msa0528020 | 0.983107 | 7.558860e-157 | -8.615850e-47 |
| Msa0472960 | Msa0528020 | 0.812473 | 4.165176e-51 | -8.615850e-47 |
| Msa0306210 | Msa0528020 | 0.809711 | 1.653039e-50 | -8.615850e-47 |
| Msa0528020 | Msa0528610 | 0.858154 | 1.001135e-62 | -8.615850e-47 |
| Msa0528020 | Msa0661190 | 0.829407 | 5.238910e-55 | -8.615850e-47 |
| Msa0528020 | Msa0867520 | 0.846094 | 2.694451e-59 | -8.615850e-47 |
| Msa0528020 | Msa0942550 | 0.833831 | 4.254153e-56 | -8.615850e-47 |
| Msa0528020 | Msa0942560 | 0.822884 | 1.865564e-53 | -8.615850e-47 |
| Msa0528020 | Msa0946280 | 0.853543 | 2.229628e-61 | -8.615850e-47 |
| Msa0528020 | Msa1029080 | 0.800903 | 1.158701e-48 | -8.615850e-47 |
| Msa0528020 | Msa1043250 | 0.800743 | 1.249185e-48 | -8.615850e-47 |
| Msa0528020 | Msa1156170 | 0.800581 | 1.347439e-48 | -8.615850e-47 |
| Msa0528020 | Msa1176720 | -0.802997 | 4.301706e-49 | -8.615850e-47 |
| Msa0528020 | Msa1191050 | 0.854269 | 1.376930e-61 | -8.615850e-47 |
| Msa0528020 | Msa1191890 | 0.835152 | 1.981365e-56 | -8.615850e-47 |
| Msa0528020 | Msa1201430 | 0.809122 | 2.211934e-50 | -8.615850e-47 |
| Msa0528020 | Msa1244720 | 0.862863 | 3.749524e-64 | -8.615850e-47 |
| Msa0528020 | Msa1249640 | 0.806702 | 7.234306e-50 | -8.615850e-47 |
| Msa0528020 | Msa1254370 | 0.804861 | 1.762822e-49 | -8.615850e-47 |
| Msa0528020 | Msa1284340 | 0.800712 | 1.267052e-48 | -8.615850e-47 |
| Msa0528020 | Msa1294610 | 0.803124 | 4.048519e-49 | -8.615850e-47 |
| Msa0528020 | Msa1325860 | 0.820682 | 6.027968e-53 | -8.615850e-47 |
| Msa0528020 | Msa1332040 | 0.815521 | 8.859418e-52 | -8.615850e-47 |
| Msa0528020 | Msa1361280 | 0.897784 | 1.004979e-76 | -8.615850e-47 |
| Msa0528020 | Msa1365700 | 0.835040 | 2.114625e-56 | -8.615850e-47 |
| Msa0528020 | Msa1403340 | -0.819117 | 1.374504e-52 | -8.615850e-47 |
| Msa0528020 | Msa1445950 | 0.807492 | 4.923001e-50 | -8.615850e-47 |
| Msa0528020 | Msa1453780 | 0.812788 | 3.554338e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0528020 | MtrunA17_Chr3g0110161 | 98.077 | 312 | 4 | 1 | 1 | 312 | 1 | 310 | 0.0 | 630 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0528020 | AT5G37510.1 | 86.076 | 316 | 40 | 1 | 1 | 312 | 1 | 316 | 0.0 | 566 |
| Msa0528020 | AT5G37510.2 | 86.076 | 316 | 40 | 1 | 1 | 312 | 1 | 316 | 0.0 | 565 |
Find 241 sgRNAs with CRISPR-Local
Find 548 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACTCCTTCTCGTGCTTTCT+TGG | 0.148903 | 4_1:+700795 | None:intergenic |
| TGCAAAGTTTGTATATTTAA+TGG | 0.190393 | 4_1:-696388 | Msa0528020:three_prime_UTR |
| TTTGAAATAGTCTTGGAAAA+TGG | 0.193927 | 4_1:+696618 | None:intergenic |
| GTACGATATGATTTGAAATT+AGG | 0.200909 | 4_1:-695791 | Msa0528020:three_prime_UTR |
| TCTCCACCCTGATCACAAAT+TGG | 0.219635 | 4_1:+700736 | None:intergenic |
| GAAGAAATTGTTGGAATATC+TGG | 0.232864 | 4_1:-697277 | Msa0528020:three_prime_UTR |
| TAGATCTGTGTTGTTGATTT+GGG | 0.239867 | 4_1:+702525 | None:intergenic |
| TGCGCCATGCCCGCTCTTCC+TGG | 0.245156 | 4_1:-702100 | Msa0528020:intron |
| TTGGGGCTGAGCGGCGGGTT+CGG | 0.245373 | 4_1:+702384 | None:intergenic |
| GAGGAGGAGGCGGGTGGTGG+TGG | 0.250324 | 4_1:+702444 | None:intergenic |
| TTAGATCTGTGTTGTTGATT+TGG | 0.281459 | 4_1:+702524 | None:intergenic |
| TGGGGCTGAGCGGCGGGTTC+GGG | 0.281624 | 4_1:+702385 | None:intergenic |
| TATTCTTCAACTCCCAATTC+CGG | 0.285395 | 4_1:+699865 | None:intergenic |
| GAGGAGGCGGGTGGTGGTGG+TGG | 0.291433 | 4_1:+702447 | None:intergenic |
| TTGCATTTAAAGCCCGGAAT+TGG | 0.299665 | 4_1:-699878 | Msa0528020:CDS |
| ATAAACCAAACCCCATTGTT+AGG | 0.307081 | 4_1:+702494 | None:intergenic |
| CATAGCAGACTTTCCATTGC+TGG | 0.307168 | 4_1:-702178 | Msa0528020:CDS |
| GGGTTCGGGTTTGCGGAGTT+CGG | 0.321764 | 4_1:+702399 | None:intergenic |
| AATGGTGATGCGAGTGTATA+TGG | 0.321818 | 4_1:+702551 | None:intergenic |
| GACGAGAGGTTGTTCAGGTT+GGG | 0.322345 | 4_1:+702366 | None:intergenic |
| GCAAAGTTTGTATATTTAAT+GGG | 0.327097 | 4_1:-696387 | Msa0528020:three_prime_UTR |
| TCTCGTGCTTTCTTGGCTAT+AGG | 0.335594 | 4_1:+700802 | None:intergenic |
| TCTGCTATCAATACGAATAT+TGG | 0.336308 | 4_1:+699809 | None:intergenic |
| GATATTCCAACAATTTCTTC+TGG | 0.338173 | 4_1:+697280 | None:intergenic |
| GGGTGGAGAGTGTGATCTTC+AGG | 0.340342 | 4_1:-700722 | Msa0528020:CDS |
| TTGAAATAGTCTTGGAAAAT+GGG | 0.343715 | 4_1:+696619 | None:intergenic |
| ATACAAACTTTGCAGATTCA+AGG | 0.344116 | 4_1:+696397 | None:intergenic |
| CGTTTACCCTATGATACAAT+TGG | 0.350227 | 4_1:-696120 | Msa0528020:three_prime_UTR |
| GGTTCGGGTTTGCGGAGTTC+GGG | 0.354183 | 4_1:+702400 | None:intergenic |
| CCATCAGGACCACGAATCAT+AGG | 0.356983 | 4_1:+697370 | None:intergenic |
| GGATGATCCGATTTCAGATT+CGG | 0.358068 | 4_1:+702622 | None:intergenic |
| GTTCAGGATCTTGGCATGTT+AGG | 0.371949 | 4_1:-700011 | Msa0528020:CDS |
| CTGGCGTGAAGCCCTTTCTT+TGG | 0.376057 | 4_1:-697329 | Msa0528020:three_prime_UTR |
| ATTCTTCAACTCCCAATTCC+GGG | 0.378095 | 4_1:+699866 | None:intergenic |
| CACTAAAAGATTTCTTAAAC+AGG | 0.378664 | 4_1:-697225 | Msa0528020:three_prime_UTR |
| CCAGCACCAACAATGATAAC+AGG | 0.379076 | 4_1:+696585 | None:intergenic |
| GTTGCAGGGGTTCAGGATCT+TGG | 0.379251 | 4_1:-700020 | Msa0528020:CDS |
| TCGATAGCGTCATCGGGATT+GGG | 0.379722 | 4_1:+702298 | None:intergenic |
| GAGGAGGAGGAGGCGGGTGG+TGG | 0.381251 | 4_1:+702441 | None:intergenic |
| TCACAAATTGGGCAATCTAA+TGG | 0.385374 | 4_1:+700748 | None:intergenic |
| AGGACAATGCGCATGACTTC+AGG | 0.385946 | 4_1:+699783 | None:intergenic |
| TCAGGTTGGGGCTGAGCGGC+GGG | 0.387179 | 4_1:+702379 | None:intergenic |
| CTCGATAGCGTCATCGGGAT+TGG | 0.388965 | 4_1:+702297 | None:intergenic |
| GGGTTTGCGGAGTTCGGGTT+TGG | 0.389818 | 4_1:+702405 | None:intergenic |
| CAGGCTGCTGCACTTGACCT+TGG | 0.391023 | 4_1:-696444 | Msa0528020:three_prime_UTR |
| AGATTGCCCAATTTGTGATC+AGG | 0.398118 | 4_1:-700743 | Msa0528020:CDS |
| CAGGATCAGTCAATGGCATT+TGG | 0.398437 | 4_1:-700703 | Msa0528020:CDS |
| ATTATGAATACTAGCATTGC+TGG | 0.399661 | 4_1:-697133 | Msa0528020:three_prime_UTR |
| CTTCAAGCGTGTGAGGTTGC+TGG | 0.401893 | 4_1:-702226 | Msa0528020:CDS |
| CATGGAGAAGTAATACATTA+AGG | 0.402841 | 4_1:+696472 | None:intergenic |
| TACCAGGGCATCAAAGATAA+TGG | 0.403072 | 4_1:-695935 | Msa0528020:three_prime_UTR |
| ATCAGAGGTTGCAGGGGTTC+AGG | 0.403687 | 4_1:-700027 | Msa0528020:CDS |
| CTGCTATGATAACAAAATCT+AGG | 0.407506 | 4_1:+702193 | None:intergenic |
| AAAAGATTTCTTAAACAGGC+TGG | 0.409928 | 4_1:-697221 | Msa0528020:three_prime_UTR |
| TCGTCCATTTGCGCAAGGTT+TGG | 0.410243 | 4_1:+696066 | None:intergenic |
| TGCATTTAAAGCCCGGAATT+GGG | 0.411080 | 4_1:-699877 | Msa0528020:CDS |
| GTTTACCCTATGATACAATT+GGG | 0.415159 | 4_1:-696119 | Msa0528020:three_prime_UTR |
| GTTAAACCAGAAGAAATTGT+TGG | 0.417305 | 4_1:-697286 | Msa0528020:three_prime_UTR |
| TCCACCCTAACAATGGGGTT+TGG | 0.419261 | 4_1:-702499 | Msa0528020:exon |
| AATGTATGGGGCGAAGGAAT+TGG | 0.421514 | 4_1:-697190 | Msa0528020:three_prime_UTR |
| GAGCGGCGGGTTCGGGTTTG+CGG | 0.422300 | 4_1:+702392 | None:intergenic |
| AGCGCCAAACCTTGCGCAAA+TGG | 0.424180 | 4_1:-696070 | Msa0528020:three_prime_UTR |
| TTCAGGTTGGGGCTGAGCGG+CGG | 0.426747 | 4_1:+702378 | None:intergenic |
| AGGTGGATCCATCACCATTC+GGG | 0.428089 | 4_1:-695993 | Msa0528020:three_prime_UTR |
| GGCTGGGGTCAAATAATGTA+TGG | 0.432511 | 4_1:-697204 | Msa0528020:three_prime_UTR |
| AGCGCCAGCGACGGGTGTAC+GGG | 0.434794 | 4_1:+702333 | None:intergenic |
| GCGCAAGAAGCAACAGGCTT+AGG | 0.435847 | 4_1:+702118 | None:intergenic |
| AATTATCTTCCAATCATCTC+TGG | 0.439607 | 4_1:+696170 | None:intergenic |
| AGATCGACGAGAGGTTGTTC+AGG | 0.439627 | 4_1:+702361 | None:intergenic |
| AAACAACAAAAGCATCCTTC+GGG | 0.441280 | 4_1:+696337 | None:intergenic |
| GATGATCCGATTTCAGATTC+GGG | 0.442991 | 4_1:+702623 | None:intergenic |
| AGCCATTATCTTTGATGCCC+TGG | 0.443739 | 4_1:+695933 | None:intergenic |
| AAAGATTTCTTAAACAGGCT+GGG | 0.445416 | 4_1:-697220 | Msa0528020:three_prime_UTR |
| AGCAAACCCGAATCTGAAAT+CGG | 0.445881 | 4_1:-702629 | Msa0528020:five_prime_UTR |
| TTCTCACTGAATGCAGCTGC+TGG | 0.446093 | 4_1:+696264 | None:intergenic |
| CGACGAGAGGTTGTTCAGGT+TGG | 0.449270 | 4_1:+702365 | None:intergenic |
| ACTAATGCTGATTTCAGATC+AGG | 0.449684 | 4_1:-697160 | Msa0528020:three_prime_UTR |
| CAAGGTCAAGTGCAGCAGCC+TGG | 0.450413 | 4_1:+696445 | None:intergenic |
| CTCTCTCGTCCATTTGCGCA+AGG | 0.451054 | 4_1:+696061 | None:intergenic |
| TTTGGCATTTGAAATAGTCT+TGG | 0.453444 | 4_1:+696611 | None:intergenic |
| TGAAGAACAGAGAATCCTTT+CGG | 0.453943 | 4_1:+702244 | None:intergenic |
| AACTATGATAACGAACATCT+TGG | 0.457876 | 4_1:-696684 | Msa0528020:three_prime_UTR |
| TTGAACGGAGGAGGAGGAGG+CGG | 0.458930 | 4_1:+702434 | None:intergenic |
| TAAACAACAAAAGCATCCTT+CGG | 0.459831 | 4_1:+696336 | None:intergenic |
| TTCCGGGCTTTAAATGCAAA+AGG | 0.460040 | 4_1:+699882 | None:intergenic |
| GCAATTTCAAGAAGTGTTTG+AGG | 0.460236 | 4_1:+696654 | None:intergenic |
| TCTCCAACTGTTGGAACTGC+AGG | 0.461407 | 4_1:+696195 | None:intergenic |
| TTACACCAGCAAAATACAAA+TGG | 0.461758 | 4_1:+695757 | None:intergenic |
| CTCCACCCTGATCACAAATT+GGG | 0.462587 | 4_1:+700737 | None:intergenic |
| GGCATGGCGCAAGAAGCAAC+AGG | 0.463187 | 4_1:+702112 | None:intergenic |
| TGGTGGTGATTGAACGGAGG+AGG | 0.463432 | 4_1:+702425 | None:intergenic |
| TAGCGCCAGCGACGGGTGTA+CGG | 0.465790 | 4_1:+702332 | None:intergenic |
| CAAGCCAAGGTCGGTTACAT+TGG | 0.466458 | 4_1:-696723 | Msa0528020:three_prime_UTR |
| CTAACATCCACCCTAACAAT+GGG | 0.466724 | 4_1:-702505 | Msa0528020:exon |
| CCTGTTATCATTGTTGGTGC+TGG | 0.468259 | 4_1:-696585 | Msa0528020:three_prime_UTR |
| CGAGCTCTGTCCGAGATAGC+AGG | 0.468342 | 4_1:-696147 | Msa0528020:three_prime_UTR |
| CTGTTATCATTGTTGGTGCT+GGG | 0.468439 | 4_1:-696584 | Msa0528020:three_prime_UTR |
| ACAGGCTTAAAGCGGCCATC+AGG | 0.470321 | 4_1:+697355 | None:intergenic |
| GAAAACCTCGATAGCGTCAT+CGG | 0.473854 | 4_1:+702291 | None:intergenic |
| TGGTGATTGAACGGAGGAGG+AGG | 0.476683 | 4_1:+702428 | None:intergenic |
| CAACCTCTGCTACCAAAGAA+AGG | 0.479683 | 4_1:+697317 | None:intergenic |
| AAGGTGGATCCATCACCATT+CGG | 0.479718 | 4_1:-695994 | Msa0528020:three_prime_UTR |
| CTCTGTTCTTCAAGCGTGTG+AGG | 0.480791 | 4_1:-702233 | Msa0528020:CDS |
| TAAACGCACCCCTGCTATCT+CGG | 0.480951 | 4_1:+696137 | None:intergenic |
| AAGGTCAAGTGCAGCAGCCT+GGG | 0.483480 | 4_1:+696446 | None:intergenic |
| GCCGCTTTAAGCCTGTGAAC+TGG | 0.484016 | 4_1:-697348 | Msa0528020:three_prime_UTR |
| AAGCCAAGGTCGGTTACATT+GGG | 0.484241 | 4_1:-696722 | Msa0528020:three_prime_UTR |
| TGAACGGAGGAGGAGGAGGC+GGG | 0.484386 | 4_1:+702435 | None:intergenic |
| TCCACCTTCTTAGTGAAGGT+TGG | 0.484390 | 4_1:+696009 | None:intergenic |
| CAATGTAACCGACCTTGGCT+TGG | 0.485781 | 4_1:+696724 | None:intergenic |
| ATACCTGGGTGCCAACCAAC+AGG | 0.486083 | 4_1:+697089 | None:intergenic |
| CGGGTTTGGTGGTGATTGAA+CGG | 0.490273 | 4_1:+702419 | None:intergenic |
| ACGAGAGGTTGTTCAGGTTG+GGG | 0.490622 | 4_1:+702367 | None:intergenic |
| TTGGAGACTCCAGAGATGAT+TGG | 0.491323 | 4_1:-696179 | Msa0528020:three_prime_UTR |
| TTTGAAGTGAGTGCTCCTAC+AGG | 0.494027 | 4_1:+699906 | None:intergenic |
| GATTGCCCAATTTGTGATCA+GGG | 0.494519 | 4_1:-700742 | Msa0528020:CDS |
| TAAACCAAACCCCATTGTTA+GGG | 0.495727 | 4_1:+702495 | None:intergenic |
| ATGATGGTTTGAAGAGGCAG+AGG | 0.496611 | 4_1:-697402 | Msa0528020:three_prime_UTR |
| TTTCCTGTTGGTTGGCACCC+AGG | 0.498602 | 4_1:-697092 | Msa0528020:intron |
| TGATTGAACGGAGGAGGAGG+AGG | 0.499246 | 4_1:+702431 | None:intergenic |
| TTTGCGGAGTTCGGGTTTGG+TGG | 0.501325 | 4_1:+702408 | None:intergenic |
| TCAAATAATGTATGGGGCGA+AGG | 0.502062 | 4_1:-697196 | Msa0528020:three_prime_UTR |
| CAAACCATCATAACAAAAGC+GGG | 0.502070 | 4_1:+697414 | None:intergenic |
| AGTGAAGATGGCAATGCAGC+TGG | 0.503709 | 4_1:+696036 | None:intergenic |
| AGAATCTAACCAGGAAGAGC+GGG | 0.505711 | 4_1:+702091 | None:intergenic |
| CGTGGTAGTGGAGAAGAGAT+TGG | 0.506494 | 4_1:-699987 | Msa0528020:CDS |
| GAAAGCACGAGAAGGAGTGA+TGG | 0.508097 | 4_1:-700791 | Msa0528020:CDS |
| ACGGAGGAGGAGGAGGCGGG+TGG | 0.509605 | 4_1:+702438 | None:intergenic |
| GCAGATGCTTTCCTGTTGGT+TGG | 0.510700 | 4_1:-697100 | Msa0528020:three_prime_UTR |
| GGTGGTGGTGGTTTGACGAA+AGG | 0.512548 | 4_1:+702459 | None:intergenic |
| AGGGCTTCACGCCAGTTCAC+AGG | 0.513098 | 4_1:+697337 | None:intergenic |
| AGCCCTTTCTTTGGTAGCAG+AGG | 0.515340 | 4_1:-697320 | Msa0528020:three_prime_UTR |
| TCCAAATTTGCAGCCACGGG+TGG | 0.516967 | 4_1:-696793 | Msa0528020:intron |
| ACCGCAATCCCGAATGGTGA+TGG | 0.517659 | 4_1:+695985 | None:intergenic |
| GTAATAGATATCTGCCCTGT+AGG | 0.517990 | 4_1:-699921 | Msa0528020:CDS |
| AAGATTTCTTAAACAGGCTG+GGG | 0.519660 | 4_1:-697219 | Msa0528020:three_prime_UTR |
| GCCACGGGTGGAAGCTGCTA+TGG | 0.519839 | 4_1:-696781 | Msa0528020:three_prime_UTR |
| TCCGCAAGCAAGGTCTTGCT+TGG | 0.522854 | 4_1:+695816 | None:intergenic |
| CACGGTGCATTCAATGTACA+AGG | 0.523747 | 4_1:-700600 | Msa0528020:intron |
| AAAACCTCGATAGCGTCATC+GGG | 0.526600 | 4_1:+702292 | None:intergenic |
| AAGGTTGGTCTCAGTGAAGA+TGG | 0.527216 | 4_1:+696024 | None:intergenic |
| GTGCAGCAGCCTGGGCAGCA+TGG | 0.527867 | 4_1:+696454 | None:intergenic |
| TCCATCACCATTCGGGATTG+CGG | 0.530979 | 4_1:-695986 | Msa0528020:three_prime_UTR |
| GATTCGCATCAGAGGTTGCA+GGG | 0.532762 | 4_1:-700034 | Msa0528020:CDS |
| TCAAACCATCATAACAAAAG+CGG | 0.533289 | 4_1:+697413 | None:intergenic |
| ACTCCCCGTACACCCGTCGC+TGG | 0.533775 | 4_1:-702337 | Msa0528020:CDS |
| TCTCTGGAGTCTCCAACTGT+TGG | 0.533784 | 4_1:+696186 | None:intergenic |
| TGCGAGTGTATATGGAGAGT+GGG | 0.533852 | 4_1:+702559 | None:intergenic |
| CAGATTGGGGCACAAGTCCA+AGG | 0.534798 | 4_1:+696427 | None:intergenic |
| GGCATGTTAGGTCGTGGTAG+TGG | 0.535963 | 4_1:-699999 | Msa0528020:CDS |
| AAGCAAGGTCTTGCTTGGCC+AGG | 0.537505 | 4_1:+695821 | None:intergenic |
| ATATGACTGATGCAATTACC+AGG | 0.537594 | 4_1:-695951 | Msa0528020:three_prime_UTR |
| AACCTCTGCTACCAAAGAAA+GGG | 0.540408 | 4_1:+697318 | None:intergenic |
| TTGTCGTATGTGTCTTGTTG+AGG | 0.541076 | 4_1:-702152 | Msa0528020:CDS |
| GATAACGAACATCTTGGTAC+TGG | 0.541143 | 4_1:-696678 | Msa0528020:three_prime_UTR |
| AAGAATCTAACCAGGAAGAG+CGG | 0.541343 | 4_1:+702090 | None:intergenic |
| AGGCCCAATGTAACCGACCT+TGG | 0.541841 | 4_1:+696719 | None:intergenic |
| TGGCCTGCAGTTCCAACAGT+TGG | 0.541849 | 4_1:-696198 | Msa0528020:three_prime_UTR |
| TTGGCGCTACAGTCCTCAGT+CGG | 0.542821 | 4_1:+696085 | None:intergenic |
| CCAGCAAAATACAAATGGAA+TGG | 0.543143 | 4_1:+695762 | None:intergenic |
| AGCAGCTGCATTCAGTGAGA+AGG | 0.545961 | 4_1:-696262 | Msa0528020:three_prime_UTR |
| CCTATGATTCGTGGTCCTGA+TGG | 0.547239 | 4_1:-697370 | Msa0528020:three_prime_UTR |
| TGTACTCTAGCGCCAGCGAC+GGG | 0.547564 | 4_1:+702325 | None:intergenic |
| ATTACTTCTCCATGCTGCCC+AGG | 0.551990 | 4_1:-696463 | Msa0528020:three_prime_UTR |
| AGATCTGTGTTGTTGATTTG+GGG | 0.552360 | 4_1:+702526 | None:intergenic |
| TGGCGCTACAGTCCTCAGTC+GGG | 0.554048 | 4_1:+696086 | None:intergenic |
| GCTGGGGTCAAATAATGTAT+GGG | 0.555168 | 4_1:-697203 | Msa0528020:three_prime_UTR |
| GCATTGTCCTCGTTTAAATG+AGG | 0.555552 | 4_1:-699770 | Msa0528020:intron |
| AACACTTCTTGAAATTGCTG+AGG | 0.556487 | 4_1:-696649 | Msa0528020:three_prime_UTR |
| CTAACCAGGAAGAGCGGGCA+TGG | 0.557243 | 4_1:+702096 | None:intergenic |
| TCATAGTTGAAATCAGTAGC+AGG | 0.557491 | 4_1:+696699 | None:intergenic |
| CGATAGCGTCATCGGGATTG+GGG | 0.558144 | 4_1:+702299 | None:intergenic |
| AGATTCGCATCAGAGGTTGC+AGG | 0.558678 | 4_1:-700035 | Msa0528020:CDS |
| GGGAGCTGATGATACAAACT+TGG | 0.560243 | 4_1:-696367 | Msa0528020:three_prime_UTR |
| ATGCGAGTGTATATGGAGAG+TGG | 0.561036 | 4_1:+702558 | None:intergenic |
| GGGGAGTTCGCGCCCGACTG+AGG | 0.561987 | 4_1:-696098 | Msa0528020:three_prime_UTR |
| GTTGAAACCATCGCAAAACA+AGG | 0.564233 | 4_1:-696522 | Msa0528020:three_prime_UTR |
| GAGCTCTGTCCGAGATAGCA+GGG | 0.566857 | 4_1:-696146 | Msa0528020:three_prime_UTR |
| ATTGATGTTACTGATGCTGT+TGG | 0.567155 | 4_1:-699834 | Msa0528020:CDS |
| TGATCTTCAGGATCAGTCAA+TGG | 0.567607 | 4_1:-700710 | Msa0528020:CDS |
| ATGTACTCTAGCGCCAGCGA+CGG | 0.568207 | 4_1:+702324 | None:intergenic |
| GGACTAACCCGAATTGTACA+TGG | 0.571193 | 4_1:+695710 | None:intergenic |
| CATCAGGACCACGAATCATA+GGG | 0.571545 | 4_1:+697371 | None:intergenic |
| AAGGATGCACACAGCAAACA+TGG | 0.573067 | 4_1:-696218 | Msa0528020:three_prime_UTR |
| CTCATGACAAGTGAACTCTC+TGG | 0.573975 | 4_1:-699948 | Msa0528020:CDS |
| TTAAATGACCCTATGATTCG+TGG | 0.576146 | 4_1:-697379 | Msa0528020:three_prime_UTR |
| TCTAACATCCACCCTAACAA+TGG | 0.577250 | 4_1:-702506 | Msa0528020:exon |
| CATACGACAATTTCCAGCAA+TGG | 0.579258 | 4_1:+702165 | None:intergenic |
| GGAATGTCATCAGATCTGAT+TGG | 0.582105 | 4_1:-696500 | Msa0528020:three_prime_UTR |
| GATCTTGGCATGTTAGGTCG+TGG | 0.583375 | 4_1:-700005 | Msa0528020:CDS |
| AACAGCATCAGTAACATCAA+TGG | 0.585328 | 4_1:+699836 | None:intergenic |
| ACACTTCTTGAAATTGCTGA+GGG | 0.586259 | 4_1:-696648 | Msa0528020:three_prime_UTR |
| TTCTCAACCGCAATCCCGAA+TGG | 0.588558 | 4_1:+695979 | None:intergenic |
| ACCAAACCCCATTGTTAGGG+TGG | 0.591247 | 4_1:+702498 | None:intergenic |
| TGCAGGACATAAACGAAGAG+TGG | 0.593125 | 4_1:-697450 | Msa0528020:intron |
| GAGACCAACCTTCACTAAGA+AGG | 0.595141 | 4_1:-696013 | Msa0528020:three_prime_UTR |
| TTTACCCTATGATACAATTG+GGG | 0.596584 | 4_1:-696118 | Msa0528020:three_prime_UTR |
| TGGATCCACCTTCTTAGTGA+AGG | 0.596835 | 4_1:+696005 | None:intergenic |
| TTGAAGTGAGTGCTCCTACA+GGG | 0.600626 | 4_1:+699907 | None:intergenic |
| ATGGCATTTGGCTCTGATCG+TGG | 0.602789 | 4_1:-700691 | Msa0528020:CDS |
| TTGTTCAGGTTGGGGCTGAG+CGG | 0.604200 | 4_1:+702375 | None:intergenic |
| GATCTGTGTTGTTGATTTGG+GGG | 0.604683 | 4_1:+702527 | None:intergenic |
| GTCATCAGATCTGATTGGAA+TGG | 0.604807 | 4_1:-696495 | Msa0528020:three_prime_UTR |
| ACCATAGCAGCTTCCACCCG+TGG | 0.605776 | 4_1:+696780 | None:intergenic |
| GTGTGTTAGATTCGCATCAG+AGG | 0.608633 | 4_1:-700042 | Msa0528020:CDS |
| GAAAGCAGATGCTTTCCTGT+TGG | 0.608999 | 4_1:-697104 | Msa0528020:three_prime_UTR |
| TACCCCGTTAAAATTCCGAA+AGG | 0.610431 | 4_1:-702259 | Msa0528020:CDS |
| GTCATCACAGTCTTTACCAA+AGG | 0.611871 | 4_1:+700622 | None:intergenic |
| GCCAGTTCACAGGCTTAAAG+CGG | 0.612009 | 4_1:+697347 | None:intergenic |
| TATCGTACTATCCGCAAGCA+AGG | 0.612375 | 4_1:+695806 | None:intergenic |
| ACCAACCTTCACTAAGAAGG+TGG | 0.614871 | 4_1:-696010 | Msa0528020:three_prime_UTR |
| GCGCCAGCGACGGGTGTACG+GGG | 0.624880 | 4_1:+702334 | None:intergenic |
| GGTACATATGAAAATACTGA+AGG | 0.625208 | 4_1:-696237 | Msa0528020:three_prime_UTR |
| GTTGTTTATCAAGGTCACCA+TGG | 0.628883 | 4_1:-696321 | Msa0528020:three_prime_UTR |
| AATATTCGTATTGATAGCAG+AGG | 0.629612 | 4_1:-699807 | Msa0528020:CDS |
| TTTGTTATGATGGTTTGAAG+AGG | 0.631528 | 4_1:-697408 | Msa0528020:three_prime_UTR |
| GCCAAGCAAGACCTTGCTTG+CGG | 0.634950 | 4_1:-695817 | Msa0528020:three_prime_UTR |
| CAATCCCGATGACGCTATCG+AGG | 0.640482 | 4_1:-702296 | Msa0528020:CDS |
| ATAGCCAAGAAAGCACGAGA+AGG | 0.643724 | 4_1:-700799 | Msa0528020:CDS |
| CAGCACCAACAATGATAACA+GGG | 0.645958 | 4_1:+696586 | None:intergenic |
| GCTGCATTCAGTGAGAAGGA+AGG | 0.652544 | 4_1:-696258 | Msa0528020:three_prime_UTR |
| CTGGGGTCAAATAATGTATG+GGG | 0.653742 | 4_1:-697202 | Msa0528020:three_prime_UTR |
| TAGAATACGCAAGACTGTCA+CGG | 0.655290 | 4_1:-696751 | Msa0528020:three_prime_UTR |
| GCGAGTGTATATGGAGAGTG+GGG | 0.661951 | 4_1:+702560 | None:intergenic |
| ATTCGCATCAGAGGTTGCAG+GGG | 0.664579 | 4_1:-700033 | Msa0528020:CDS |
| TGATATGAAGAGATCTGTGG+TGG | 0.665318 | 4_1:-700659 | Msa0528020:CDS |
| TTGAAACCATCGCAAAACAA+GGG | 0.668125 | 4_1:-696521 | Msa0528020:three_prime_UTR |
| TATGACTGATGCAATTACCA+GGG | 0.680312 | 4_1:-695950 | Msa0528020:three_prime_UTR |
| AGCTCTGTCCGAGATAGCAG+GGG | 0.680552 | 4_1:-696145 | Msa0528020:three_prime_UTR |
| GATAAACACTCTTATCACCA+TGG | 0.680783 | 4_1:+696304 | None:intergenic |
| ACGGCAAACCAAGCCAAGGT+CGG | 0.681995 | 4_1:-696732 | Msa0528020:three_prime_UTR |
| TGTCACGGCAAACCAAGCCA+AGG | 0.683373 | 4_1:-696736 | Msa0528020:three_prime_UTR |
| TTACCCTATGATACAATTGG+GGG | 0.685077 | 4_1:-696117 | Msa0528020:three_prime_UTR |
| TGCCCAATTTGTGATCAGGG+TGG | 0.691459 | 4_1:-700739 | Msa0528020:CDS |
| GTTTGGTGGTGATTGAACGG+AGG | 0.700949 | 4_1:+702422 | None:intergenic |
| CACTGATATGAAGAGATCTG+TGG | 0.705213 | 4_1:-700662 | Msa0528020:CDS |
| CGGGGAGTGAGATCGACGAG+AGG | 0.710019 | 4_1:+702352 | None:intergenic |
| AAACTTGGACAAGATCCCGA+AGG | 0.712042 | 4_1:-696352 | Msa0528020:three_prime_UTR |
| TAACATCCACCCTAACAATG+GGG | 0.738744 | 4_1:-702504 | Msa0528020:exon |
| TGGTAAAGACTGTGATGACA+CGG | 0.740395 | 4_1:-700618 | Msa0528020:CDS |
| AATCTAACCTCATTTAAACG+AGG | 0.760002 | 4_1:+699763 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGTTAAAAAATCATTTTTTA+TGG | - | chr4_1:696617-696636 | Msa0528020:three_prime_UTR | 10.0% |
| !!! | GTTAAAAAATCATTTTTTAT+GGG | - | chr4_1:696618-696637 | Msa0528020:three_prime_UTR | 10.0% |
| !!! | ATTACATTTTTAACAATAAA+TGG | + | chr4_1:697451-697470 | None:intergenic | 10.0% |
| !! | ATATGATTAAAATAATATTC+TGG | - | chr4_1:698011-698030 | Msa0528020:intron | 10.0% |
| !!! | GATTTTCAAATTTTATTAAT+TGG | - | chr4_1:698892-698911 | Msa0528020:intron | 10.0% |
| !!! | ATAACATTTTTAAAAAGTTT+GGG | + | chr4_1:699509-699528 | None:intergenic | 10.0% |
| !!! | AATAACATTTTTAAAAAGTT+TGG | + | chr4_1:699510-699529 | None:intergenic | 10.0% |
| !!! | AATAAAATTATTCGATATTT+TGG | + | chr4_1:700236-700255 | None:intergenic | 10.0% |
| !!! | ATATTTTTGGTATATAATAA+TGG | - | chr4_1:700427-700446 | Msa0528020:intron | 10.0% |
| !!! | TATGAAAATTATTGTTTTAT+TGG | - | chr4_1:701417-701436 | Msa0528020:intron | 10.0% |
| !!! | TGTTTGAAAAAATAGATTTT+GGG | + | chr4_1:696576-696595 | None:intergenic | 15.0% |
| !!! | ACTATTAAGTTTAATACTTT+TGG | + | chr4_1:697021-697040 | None:intergenic | 15.0% |
| !! | AAAATTATCATATGTTTAGT+TGG | - | chr4_1:697311-697330 | Msa0528020:three_prime_UTR | 15.0% |
| !!! | ATCTTACTTTTAATTTCATT+TGG | - | chr4_1:697365-697384 | Msa0528020:three_prime_UTR | 15.0% |
| !! | TATAATCATATGTTCAATTT+AGG | - | chr4_1:697470-697489 | Msa0528020:intron | 15.0% |
| !! | ATAATCATATGTTCAATTTA+GGG | - | chr4_1:697471-697490 | Msa0528020:intron | 15.0% |
| !! | TATATATATAAATTAAGTGG+TGG | - | chr4_1:697934-697953 | Msa0528020:intron | 15.0% |
| !! | CTATTATCACAATTTATTAT+GGG | - | chr4_1:699058-699077 | Msa0528020:intron | 15.0% |
| !!! | TTTTTTAAGTGTTATTTACT+GGG | - | chr4_1:699324-699343 | Msa0528020:intron | 15.0% |
| !!! | TAACATTTTTAAAAAGTTTG+GGG | + | chr4_1:699508-699527 | None:intergenic | 15.0% |
| !!! | ATAATAATGGTATAATTTTG+TGG | - | chr4_1:700440-700459 | Msa0528020:intron | 15.0% |
| !!! | CGTGTATTATTTATTTTTTT+TGG | - | chr4_1:702439-702458 | Msa0528020:CDS | 15.0% |
| !!! | ATGAATTTTGTTGAAGATAT+TGG | + | chr4_1:695719-695738 | None:intergenic | 20.0% |
| !!! | GTGTTTGAAAAAATAGATTT+TGG | + | chr4_1:696577-696596 | None:intergenic | 20.0% |
| !!! | AAAAAATCATTTTTTATGGG+CGG | - | chr4_1:696621-696640 | Msa0528020:three_prime_UTR | 20.0% |
| !!! | AAATTGTAGTTTGTAGATAA+CGG | - | chr4_1:697075-697094 | Msa0528020:intron | 20.0% |
| !! | TGATATTCTTGTAAGAATTA+AGG | - | chr4_1:697883-697902 | Msa0528020:intron | 20.0% |
| !! | ATTTAATTGACAACAAAAAG+AGG | + | chr4_1:698184-698203 | None:intergenic | 20.0% |
| !!! | ATGTTTTATTAAACTACTTG+CGG | - | chr4_1:698586-698605 | Msa0528020:intron | 20.0% |
| !! | ACAACCAATTAAATAAATCA+AGG | + | chr4_1:698814-698833 | None:intergenic | 20.0% |
| !! | TGATTTATTTAATTGGTTGT+AGG | - | chr4_1:698814-698833 | Msa0528020:intron | 20.0% |
| !! | TAATAAATTGTGATAATAGG+AGG | + | chr4_1:699057-699076 | None:intergenic | 20.0% |
| !! | CCATAATAAATTGTGATAAT+AGG | + | chr4_1:699060-699079 | None:intergenic | 20.0% |
| !! | CCTATTATCACAATTTATTA+TGG | - | chr4_1:699057-699076 | Msa0528020:intron | 20.0% |
| !!! | GTTTTTTAAGTGTTATTTAC+TGG | - | chr4_1:699323-699342 | Msa0528020:intron | 20.0% |
| !!! | AACATTTTTAAAAAGTTTGG+GGG | + | chr4_1:699507-699526 | None:intergenic | 20.0% |
| !!! | GAGATGATGTTTTATATTTA+GGG | - | chr4_1:699815-699834 | Msa0528020:CDS | 20.0% |
| !! | TAATGTCTAACAAATGTTTA+CGG | - | chr4_1:699959-699978 | Msa0528020:CDS | 20.0% |
| !! | TTAGAGTTAGAAATTCATAT+GGG | - | chr4_1:699985-700004 | Msa0528020:CDS | 20.0% |
| !!! | AAAATTATTCGATATTTTGG+CGG | + | chr4_1:700233-700252 | None:intergenic | 20.0% |
| !!! | ATTATAATTTGTAGATTCTG+AGG | - | chr4_1:700396-700415 | Msa0528020:intron | 20.0% |
| !! | AATAAATTAGAGATATACCT+GGG | + | chr4_1:701245-701264 | None:intergenic | 20.0% |
| !! | AAATAAATTAGAGATATACC+TGG | + | chr4_1:701246-701265 | None:intergenic | 20.0% |
| !! | AGATATTAATGCATAAAAGA+TGG | + | chr4_1:701475-701494 | None:intergenic | 20.0% |
| !!! | ATCTTTTATGCATTAATATC+TGG | - | chr4_1:701474-701493 | Msa0528020:intron | 20.0% |
| !! | TGCAAAGTTTGTATATTTAA+TGG | - | chr4_1:701929-701948 | Msa0528020:intron | 20.0% |
| !! | GCAAAGTTTGTATATTTAAT+GGG | - | chr4_1:701930-701949 | Msa0528020:intron | 20.0% |
| !!! | TTCTTTTTTTTTTCTGTTGC+TGG | - | chr4_1:696252-696271 | Msa0528020:three_prime_UTR | 25.0% |
| ! | TCTACTACACTTATTTAATC+CGG | + | chr4_1:696389-696408 | None:intergenic | 25.0% |
| !!! | TTTTGTCATTTGTAAGTGTT+AGG | - | chr4_1:696492-696511 | Msa0528020:three_prime_UTR | 25.0% |
| !!! | GAAAAAATAGATTTTGGGAA+AGG | + | chr4_1:696571-696590 | None:intergenic | 25.0% |
| !!! | CTATTTTTTCAAACACAAAG+AGG | - | chr4_1:696581-696600 | Msa0528020:three_prime_UTR | 25.0% |
| ! | ACAATATTAGATAGAGAGTT+GGG | - | chr4_1:696689-696708 | Msa0528020:three_prime_UTR | 25.0% |
| ! | TATGAGAGAAACTATTAAGA+AGG | - | chr4_1:696859-696878 | Msa0528020:intron | 25.0% |
| ! | TATATGATAGAACATTATGC+CGG | - | chr4_1:696915-696934 | Msa0528020:intron | 25.0% |
| !!! | TGATTCTTTTGATTAGTTCA+AGG | - | chr4_1:696995-697014 | Msa0528020:intron | 25.0% |
| ! | AAAAAGAAATGTCAACTAGA+TGG | + | chr4_1:697158-697177 | None:intergenic | 25.0% |
| ! | TATCATATGTTTAGTTGGTT+TGG | - | chr4_1:697316-697335 | Msa0528020:three_prime_UTR | 25.0% |
| !! | ATCATATGTTTAGTTGGTTT+GGG | - | chr4_1:697317-697336 | Msa0528020:three_prime_UTR | 25.0% |
| ! | TAAAGATAATCAAGTTTGCA+GGG | + | chr4_1:697752-697771 | None:intergenic | 25.0% |
| !! | TTGATAACTATATCATACCT+TGG | - | chr4_1:697782-697801 | Msa0528020:intron | 25.0% |
| ! | ATAAATTAAAGAAACCTAGC+TGG | + | chr4_1:698090-698109 | None:intergenic | 25.0% |
| !! | AGCTAGGTTTCTTTAATTTA+TGG | - | chr4_1:698089-698108 | Msa0528020:intron | 25.0% |
| !! | ATTTTATCTGAGTTCCTTAA+TGG | - | chr4_1:698222-698241 | Msa0528020:intron | 25.0% |
| ! | AATTCATACTACGAAATCAT+AGG | + | chr4_1:698701-698720 | None:intergenic | 25.0% |
| ! | CTGACCTTGATTTATTTAAT+TGG | - | chr4_1:698807-698826 | Msa0528020:intron | 25.0% |
| ! | AAGTAATCAGGTTAATATCA+GGG | + | chr4_1:698979-698998 | None:intergenic | 25.0% |
| ! | AAAGTAATCAGGTTAATATC+AGG | + | chr4_1:698980-698999 | None:intergenic | 25.0% |
| ! | TATAAAACATCATCTCCAAA+AGG | + | chr4_1:699811-699830 | None:intergenic | 25.0% |
| !! | GGAGATGATGTTTTATATTT+AGG | - | chr4_1:699814-699833 | Msa0528020:CDS | 25.0% |
| ! | CCTATTATAAACCAAACAAT+GGG | - | chr4_1:699885-699904 | Msa0528020:CDS | 25.0% |
| ! | TTTGTTAGACATTAGGAATT+AGG | + | chr4_1:699953-699972 | None:intergenic | 25.0% |
| !! | GTAAACATTTGTTAGACATT+AGG | + | chr4_1:699960-699979 | None:intergenic | 25.0% |
| ! | GTTAGAGTTAGAAATTCATA+TGG | - | chr4_1:699984-700003 | Msa0528020:CDS | 25.0% |
| ! | AGAGAAGTTATTAAGTATGA+TGG | - | chr4_1:700058-700077 | Msa0528020:intron | 25.0% |
| !!! | CTATCTAGTTTTAACAACAT+GGG | - | chr4_1:700194-700213 | Msa0528020:intron | 25.0% |
| !!! | TGAGGTATCTCTAATATTTT+TGG | - | chr4_1:700414-700433 | Msa0528020:intron | 25.0% |
| ! | TATATGCTTAATTTAGCAGA+AGG | - | chr4_1:700795-700814 | Msa0528020:CDS | 25.0% |
| ! | ATATGCTTAATTTAGCAGAA+GGG | - | chr4_1:700796-700815 | Msa0528020:CDS | 25.0% |
| ! | CACTAAAAGATTTCTTAAAC+AGG | - | chr4_1:701092-701111 | Msa0528020:intron | 25.0% |
| !!! | ACTTCTCTAGTTTTATGTTA+TGG | - | chr4_1:701275-701294 | Msa0528020:intron | 25.0% |
| ! | CAATATATAACAGGAATCAT+TGG | + | chr4_1:701305-701324 | None:intergenic | 25.0% |
| ! | ATCGCATTTCAATATATAAC+AGG | + | chr4_1:701314-701333 | None:intergenic | 25.0% |
| !! | GGATTTCATAATTGTAGTTT+TGG | - | chr4_1:701361-701380 | Msa0528020:intron | 25.0% |
| !! | TTGAAATAGTCTTGGAAAAT+GGG | + | chr4_1:701701-701720 | None:intergenic | 25.0% |
| !! | TTTGAAATAGTCTTGGAAAA+TGG | + | chr4_1:701702-701721 | None:intergenic | 25.0% |
| !! | GTACGATATGATTTGAAATT+AGG | - | chr4_1:702526-702545 | Msa0528020:five_prime_UTR | 25.0% |
| !! | AATTTTTGCCATGTACAATT+CGG | - | chr4_1:702599-702618 | Msa0528020:five_prime_UTR | 25.0% |
| !! | GTAAACTTTTAACAAACAGT+CGG | + | chr4_1:702631-702650 | None:intergenic | 25.0% |
| !! | TAGATCTGTGTTGTTGATTT+GGG | + | chr4_1:695795-695814 | None:intergenic | 30.0% |
| ! | TTAGATCTGTGTTGTTGATT+TGG | + | chr4_1:695796-695815 | None:intergenic | 30.0% |
| !! | AATCCTTTCGGAATTTTAAC+GGG | + | chr4_1:696064-696083 | None:intergenic | 30.0% |
| ! | GAATCCTTTCGGAATTTTAA+CGG | + | chr4_1:696065-696084 | None:intergenic | 30.0% |
| CTGCTATGATAACAAAATCT+AGG | + | chr4_1:696127-696146 | None:intergenic | 30.0% | |
| AAAGAAGTAAGAATCTAACC+AGG | + | chr4_1:696238-696257 | None:intergenic | 30.0% | |
| !!! | TGAGTTTTGTTGTGTGTAAA+TGG | - | chr4_1:696339-696358 | Msa0528020:three_prime_UTR | 30.0% |
| TAGAGATGAAGATATTGCAT+TGG | - | chr4_1:696405-696424 | Msa0528020:three_prime_UTR | 30.0% | |
| TAATGCTAGACCATGATTTA+GGG | - | chr4_1:696436-696455 | Msa0528020:three_prime_UTR | 30.0% | |
| TCATTTGTAAGTGTTAGGTT+AGG | - | chr4_1:696497-696516 | Msa0528020:three_prime_UTR | 30.0% | |
| GACAATATTAGATAGAGAGT+TGG | - | chr4_1:696688-696707 | Msa0528020:three_prime_UTR | 30.0% | |
| CAATATTAGATAGAGAGTTG+GGG | - | chr4_1:696690-696709 | Msa0528020:three_prime_UTR | 30.0% | |
| ! | AATAAGGAGAGTATATCAGA+TGG | - | chr4_1:696793-696812 | Msa0528020:intron | 30.0% |
| ! | GTTTCTCTCATAGTTTTTCT+AGG | + | chr4_1:696851-696870 | None:intergenic | 30.0% |
| ! | AGAGATTAATGAGTTGGATA+AGG | - | chr4_1:696886-696905 | Msa0528020:intron | 30.0% |
| CTATTAGACACATAACTAGA+TGG | + | chr4_1:697117-697136 | None:intergenic | 30.0% | |
| !! | TCATATGTTTAGTTGGTTTG+GGG | - | chr4_1:697318-697337 | Msa0528020:three_prime_UTR | 30.0% |
| !! | ACCTTGATTTTGTTTAGTTG+AGG | - | chr4_1:697418-697437 | Msa0528020:three_prime_UTR | 30.0% |
| ACCTCAACTAAACAAAATCA+AGG | + | chr4_1:697422-697441 | None:intergenic | 30.0% | |
| GTAAAGATAATCAAGTTTGC+AGG | + | chr4_1:697753-697772 | None:intergenic | 30.0% | |
| TATATATATGCAACTCAACG+AGG | + | chr4_1:697910-697929 | None:intergenic | 30.0% | |
| TCTGGTGTGATAATTTAGTT+TGG | - | chr4_1:698029-698048 | Msa0528020:intron | 30.0% | |
| AATTTATGGTTAACGACATC+TGG | - | chr4_1:698103-698122 | Msa0528020:intron | 30.0% | |
| AATTGACAACAAAAAGAGGA+TGG | + | chr4_1:698180-698199 | None:intergenic | 30.0% | |
| GGAAGAAAGTAATATTTCAC+CGG | + | chr4_1:698250-698269 | None:intergenic | 30.0% | |
| AAATATTACTTTCTTCCCAC+AGG | - | chr4_1:698253-698272 | Msa0528020:intron | 30.0% | |
| TCTGCTATCAATACGAATAT+TGG | + | chr4_1:698511-698530 | None:intergenic | 30.0% | |
| ! | AATATTCGTATTGATAGCAG+AGG | - | chr4_1:698510-698529 | Msa0528020:intron | 30.0% |
| AATCTAACCTCATTTAAACG+AGG | + | chr4_1:698557-698576 | None:intergenic | 30.0% | |
| TAAATGAGGTTAGATTCTGA+TGG | - | chr4_1:698561-698580 | Msa0528020:intron | 30.0% | |
| ACAACACTCATAAGTACTTA+AGG | + | chr4_1:698678-698697 | None:intergenic | 30.0% | |
| AGTAATCAGGTTAATATCAG+GGG | + | chr4_1:698978-698997 | None:intergenic | 30.0% | |
| GCTAGTGATATAAAGTAATC+AGG | + | chr4_1:698991-699010 | None:intergenic | 30.0% | |
| ACAATTTATTATGGGACTGA+AGG | - | chr4_1:699066-699085 | Msa0528020:intron | 30.0% | |
| TGAATAACTACTCAGACAAT+TGG | + | chr4_1:699090-699109 | None:intergenic | 30.0% | |
| AAAATGCTCACATATTCTTC+TGG | + | chr4_1:699191-699210 | None:intergenic | 30.0% | |
| CATGATTCATGATCAATCAA+TGG | + | chr4_1:699350-699369 | None:intergenic | 30.0% | |
| GGATACACATTCAACTAAAT+GGG | - | chr4_1:699473-699492 | Msa0528020:intron | 30.0% | |
| GATACACATTCAACTAAATG+GGG | - | chr4_1:699474-699493 | Msa0528020:intron | 30.0% | |
| ATACACATTCAACTAAATGG+GGG | - | chr4_1:699475-699494 | Msa0528020:intron | 30.0% | |
| ! | AGAATGTACATCTTAGCTTT+AGG | - | chr4_1:699843-699862 | Msa0528020:CDS | 30.0% |
| !! | GAATGTACATCTTAGCTTTA+GGG | - | chr4_1:699844-699863 | Msa0528020:CDS | 30.0% |
| GCCTATTATAAACCAAACAA+TGG | - | chr4_1:699884-699903 | Msa0528020:CDS | 30.0% | |
| ! | CCCATTGTTTGGTTTATAAT+AGG | + | chr4_1:699888-699907 | None:intergenic | 30.0% |
| TCTTCCTAATGTCTAACAAA+TGG | - | chr4_1:699915-699934 | Msa0528020:CDS | 30.0% | |
| CTTCCTAATGTCTAACAAAT+GGG | - | chr4_1:699916-699935 | Msa0528020:CDS | 30.0% | |
| TTAGGAATTAGGAACATACT+TGG | + | chr4_1:699942-699961 | None:intergenic | 30.0% | |
| GACTATAAATCAGTGTACAA+AGG | + | chr4_1:700129-700148 | None:intergenic | 30.0% | |
| ! | TATCTCGCTATAGCATTTTA+AGG | - | chr4_1:700163-700182 | Msa0528020:intron | 30.0% |
| ! | ATCTCGCTATAGCATTTTAA+GGG | - | chr4_1:700164-700183 | Msa0528020:intron | 30.0% |
| !!! | GCTATCTAGTTTTAACAACA+TGG | - | chr4_1:700193-700212 | Msa0528020:intron | 30.0% |
| GAGATTATTGAATGCTTGTT+TGG | - | chr4_1:700289-700308 | Msa0528020:intron | 30.0% | |
| ! | TTGTCGTTGATAGAAATTTC+TGG | - | chr4_1:700553-700572 | Msa0528020:intron | 30.0% |
| CGTAAAATATTAATCCTCAC+TGG | + | chr4_1:700742-700761 | None:intergenic | 30.0% | |
| TCAAACCATCATAACAAAAG+CGG | + | chr4_1:700907-700926 | None:intergenic | 30.0% | |
| ! | TTTGTTATGATGGTTTGAAG+AGG | - | chr4_1:700909-700928 | Msa0528020:intron | 30.0% |
| GTTAAACCAGAAGAAATTGT+TGG | - | chr4_1:701031-701050 | Msa0528020:intron | 30.0% | |
| GATATTCCAACAATTTCTTC+TGG | + | chr4_1:701040-701059 | None:intergenic | 30.0% | |
| GAAGAAATTGTTGGAATATC+TGG | - | chr4_1:701040-701059 | Msa0528020:intron | 30.0% | |
| ! | GAAATCTTTTAGTGCAATCA+TGG | + | chr4_1:701086-701105 | None:intergenic | 30.0% |
| AAAAGATTTCTTAAACAGGC+TGG | - | chr4_1:701096-701115 | Msa0528020:intron | 30.0% | |
| AAAGATTTCTTAAACAGGCT+GGG | - | chr4_1:701097-701116 | Msa0528020:intron | 30.0% | |
| ATTATGAATACTAGCATTGC+TGG | - | chr4_1:701184-701203 | Msa0528020:intron | 30.0% | |
| ATTAATATCTGGTGTCTGTT+TGG | - | chr4_1:701485-701504 | Msa0528020:intron | 30.0% | |
| ! | AACTATGATAACGAACATCT+TGG | - | chr4_1:701633-701652 | Msa0528020:intron | 30.0% |
| ! | TTTGGCATTTGAAATAGTCT+TGG | + | chr4_1:701709-701728 | None:intergenic | 30.0% |
| ! | AACAATGATAACAGGGTTTT+TGG | + | chr4_1:701727-701746 | None:intergenic | 30.0% |
| AAAAACCCTGTTATCATTGT+TGG | - | chr4_1:701726-701745 | Msa0528020:intron | 30.0% | |
| CATGGAGAAGTAATACATTA+AGG | + | chr4_1:701848-701867 | None:intergenic | 30.0% | |
| !!! | TTCAAGGCTTTTTTCAGATT+GGG | + | chr4_1:701907-701926 | None:intergenic | 30.0% |
| !!! | ATTCAAGGCTTTTTTCAGAT+TGG | + | chr4_1:701908-701927 | None:intergenic | 30.0% |
| ATACAAACTTTGCAGATTCA+AGG | + | chr4_1:701923-701942 | None:intergenic | 30.0% | |
| !! | TAAACAACAAAAGCATCCTT+CGG | + | chr4_1:701984-702003 | None:intergenic | 30.0% |
| !!! | GATGCTTTTGTTGTTTATCA+AGG | - | chr4_1:701987-702006 | Msa0528020:intron | 30.0% |
| GGTACATATGAAAATACTGA+AGG | - | chr4_1:702080-702099 | Msa0528020:intron | 30.0% | |
| AATTATCTTCCAATCATCTC+TGG | + | chr4_1:702150-702169 | None:intergenic | 30.0% | |
| GTTTACCCTATGATACAATT+GGG | - | chr4_1:702198-702217 | Msa0528020:CDS | 30.0% | |
| TTTACCCTATGATACAATTG+GGG | - | chr4_1:702199-702218 | Msa0528020:CDS | 30.0% | |
| TTACACCAGCAAAATACAAA+TGG | + | chr4_1:702563-702582 | None:intergenic | 30.0% | |
| ! | ATTTTTGCCATGTACAATTC+GGG | - | chr4_1:702600-702619 | Msa0528020:five_prime_UTR | 30.0% |
| !! | AGATCTGTGTTGTTGATTTG+GGG | + | chr4_1:695794-695813 | None:intergenic | 35.0% |
| TAAACCAAACCCCATTGTTA+GGG | + | chr4_1:695825-695844 | None:intergenic | 35.0% | |
| ATAAACCAAACCCCATTGTT+AGG | + | chr4_1:695826-695845 | None:intergenic | 35.0% | |
| !! | ATCCTTTCGGAATTTTAACG+GGG | + | chr4_1:696063-696082 | None:intergenic | 35.0% |
| TGAAGAACAGAGAATCCTTT+CGG | + | chr4_1:696076-696095 | None:intergenic | 35.0% | |
| AAGATATTGCATTGGATGTG+TGG | - | chr4_1:696413-696432 | Msa0528020:three_prime_UTR | 35.0% | |
| GTAATGCTAGACCATGATTT+AGG | - | chr4_1:696435-696454 | Msa0528020:three_prime_UTR | 35.0% | |
| ! | TCTACCATCTTTTCTCCAAT+AGG | + | chr4_1:696722-696741 | None:intergenic | 35.0% |
| GAGAAAAGATGGTAGAAACT+CGG | - | chr4_1:696726-696745 | Msa0528020:three_prime_UTR | 35.0% | |
| GACTTGTAGATTCTGCAATA+AGG | - | chr4_1:696777-696796 | Msa0528020:three_prime_UTR | 35.0% | |
| GGATCTAGAGATTAATGAGT+TGG | - | chr4_1:696880-696899 | Msa0528020:intron | 35.0% | |
| ATGTCAACTAGATGGTTACA+AGG | + | chr4_1:697150-697169 | None:intergenic | 35.0% | |
| TCACAAATTGGGCAATCTAA+TGG | + | chr4_1:697572-697591 | None:intergenic | 35.0% | |
| !! | TCTGTGGTGGATAAAAATCT+TGG | - | chr4_1:697671-697690 | Msa0528020:intron | 35.0% |
| GGATAAAAATCTTGGACCTT+TGG | - | chr4_1:697679-697698 | Msa0528020:intron | 35.0% | |
| !! | CAACAAATTTCTAGCTTCCA+AGG | + | chr4_1:697802-697821 | None:intergenic | 35.0% |
| TTACAGTATGATAGTTTCCG+AGG | - | chr4_1:697963-697982 | Msa0528020:intron | 35.0% | |
| TACAGTATGATAGTTTCCGA+GGG | - | chr4_1:697964-697983 | Msa0528020:intron | 35.0% | |
| AAAACCCAACCTTCAACATT+TGG | - | chr4_1:698151-698170 | Msa0528020:intron | 35.0% | |
| AAACCCAACCTTCAACATTT+GGG | - | chr4_1:698152-698171 | Msa0528020:intron | 35.0% | |
| ATATTTCACCGGATCCATTA+AGG | + | chr4_1:698239-698258 | None:intergenic | 35.0% | |
| !! | AACCTTTTGCATTTAAAGCC+CGG | - | chr4_1:698433-698452 | Msa0528020:intron | 35.0% |
| TATTCTTCAACTCCCAATTC+CGG | + | chr4_1:698455-698474 | None:intergenic | 35.0% | |
| AACAGCATCAGTAACATCAA+TGG | + | chr4_1:698484-698503 | None:intergenic | 35.0% | |
| ATTGATGTTACTGATGCTGT+TGG | - | chr4_1:698483-698502 | Msa0528020:intron | 35.0% | |
| CCACAAGAAAATTGAAGCTT+TGG | + | chr4_1:698615-698634 | None:intergenic | 35.0% | |
| ! | CCAAAGCTTCAATTTTCTTG+TGG | - | chr4_1:698612-698631 | Msa0528020:intron | 35.0% |
| AACTCTTGCAAGAAAAACCA+TGG | - | chr4_1:698650-698669 | Msa0528020:intron | 35.0% | |
| ! | CATAAGTACTTAAGGTACCA+TGG | + | chr4_1:698670-698689 | None:intergenic | 35.0% |
| CAATCTACACTCCAACTTAT+AGG | - | chr4_1:698749-698768 | Msa0528020:intron | 35.0% | |
| !! | AAGCATCGATTCCTATAAGT+TGG | + | chr4_1:698763-698782 | None:intergenic | 35.0% |
| AATCGATGCTTACCAAAAGT+TGG | - | chr4_1:698772-698791 | Msa0528020:intron | 35.0% | |
| ! | AATTCACTGGTACCAACTTT+TGG | + | chr4_1:698787-698806 | None:intergenic | 35.0% |
| AAATCAAGGTCAGAATTCAC+TGG | + | chr4_1:698800-698819 | None:intergenic | 35.0% | |
| TCAACTCGCTTATGTCATAA+TGG | + | chr4_1:698874-698893 | None:intergenic | 35.0% | |
| ACATGTGTAATGTGTTTCAG+AGG | + | chr4_1:698921-698940 | None:intergenic | 35.0% | |
| CACATTACACATGTTGTGTT+TGG | - | chr4_1:698927-698946 | Msa0528020:intron | 35.0% | |
| ! | TAGCAATGATTGCATTGATG+TGG | - | chr4_1:699007-699026 | Msa0528020:intron | 35.0% |
| ! | AGCAATGATTGCATTGATGT+GGG | - | chr4_1:699008-699027 | Msa0528020:intron | 35.0% |
| TTTACAGACTGGTAAGCTAA+AGG | + | chr4_1:699260-699279 | None:intergenic | 35.0% | |
| TTACCAGTCTGTAAATGCTA+TGG | - | chr4_1:699265-699284 | Msa0528020:intron | 35.0% | |
| TACCAGTCTGTAAATGCTAT+GGG | - | chr4_1:699266-699285 | Msa0528020:intron | 35.0% | |
| AGGGATAACAATTAAGAAGC+TGG | - | chr4_1:699301-699320 | Msa0528020:intron | 35.0% | |
| CATGAATCATGAAGTAACCT+TGG | - | chr4_1:699359-699378 | Msa0528020:intron | 35.0% | |
| ! | TGCACATTTTATACAGTCCA+AGG | + | chr4_1:699379-699398 | None:intergenic | 35.0% |
| TAGTGAAAAATTAGCATGGG+AGG | + | chr4_1:699433-699452 | None:intergenic | 35.0% | |
| ! | TCCCATGCTAATTTTTCACT+AGG | - | chr4_1:699432-699451 | Msa0528020:intron | 35.0% |
| CCCTAGTGAAAAATTAGCAT+GGG | + | chr4_1:699436-699455 | None:intergenic | 35.0% | |
| ! | CCCATGCTAATTTTTCACTA+GGG | - | chr4_1:699433-699452 | Msa0528020:intron | 35.0% |
| ACCCTAGTGAAAAATTAGCA+TGG | + | chr4_1:699437-699456 | None:intergenic | 35.0% | |
| CGGATACACATTCAACTAAA+TGG | - | chr4_1:699472-699491 | Msa0528020:intron | 35.0% | |
| TTCAACAATGGCTATGATAG+TGG | - | chr4_1:699612-699631 | Msa0528020:intron | 35.0% | |
| ! | CTTGTTTCTTCACAACATGA+GGG | + | chr4_1:699716-699735 | None:intergenic | 35.0% |
| ! | ACTTGTTTCTTCACAACATG+AGG | + | chr4_1:699717-699736 | None:intergenic | 35.0% |
| ! | TGATGATGACGAAAATATGC+AGG | - | chr4_1:699753-699772 | Msa0528020:intron | 35.0% |
| ! | GATGATGACGAAAATATGCA+GGG | - | chr4_1:699754-699773 | Msa0528020:intron | 35.0% |
| ! | ATGATGACGAAAATATGCAG+GGG | - | chr4_1:699755-699774 | Msa0528020:intron | 35.0% |
| AAGATACTTGACCCATTGTT+TGG | + | chr4_1:699899-699918 | None:intergenic | 35.0% | |
| TGTCTAACAAATGTTTACGG+CGG | - | chr4_1:699962-699981 | Msa0528020:CDS | 35.0% | |
| ! | TCTCGCTATAGCATTTTAAG+GGG | - | chr4_1:700165-700184 | Msa0528020:intron | 35.0% |
| !! | AAAACCCGCTTTTGTTATGA+TGG | - | chr4_1:700899-700918 | Msa0528020:intron | 35.0% |
| CAAACCATCATAACAAAAGC+GGG | + | chr4_1:700906-700925 | None:intergenic | 35.0% | |
| TTAAATGACCCTATGATTCG+TGG | - | chr4_1:700938-700957 | Msa0528020:intron | 35.0% | |
| AAGATTTCTTAAACAGGCTG+GGG | - | chr4_1:701098-701117 | Msa0528020:intron | 35.0% | |
| !! | ACTAATGCTGATTTCAGATC+AGG | - | chr4_1:701157-701176 | Msa0528020:intron | 35.0% |
| TCATAGTTGAAATCAGTAGC+AGG | + | chr4_1:701621-701640 | None:intergenic | 35.0% | |
| !! | GCAATTTCAAGAAGTGTTTG+AGG | + | chr4_1:701666-701685 | None:intergenic | 35.0% |
| AACACTTCTTGAAATTGCTG+AGG | - | chr4_1:701668-701687 | Msa0528020:intron | 35.0% | |
| ACACTTCTTGAAATTGCTGA+GGG | - | chr4_1:701669-701688 | Msa0528020:intron | 35.0% | |
| TTGAAACCATCGCAAAACAA+GGG | - | chr4_1:701796-701815 | Msa0528020:intron | 35.0% | |
| !!! | TCAAGGCTTTTTTCAGATTG+GGG | + | chr4_1:701906-701925 | None:intergenic | 35.0% |
| !! | AAACAACAAAAGCATCCTTC+GGG | + | chr4_1:701983-702002 | None:intergenic | 35.0% |
| GATAAACACTCTTATCACCA+TGG | + | chr4_1:702016-702035 | None:intergenic | 35.0% | |
| CGTTTACCCTATGATACAAT+TGG | - | chr4_1:702197-702216 | Msa0528020:CDS | 35.0% | |
| TTACCCTATGATACAATTGG+GGG | - | chr4_1:702200-702219 | Msa0528020:CDS | 35.0% | |
| ATATGACTGATGCAATTACC+AGG | - | chr4_1:702366-702385 | Msa0528020:CDS | 35.0% | |
| TATGACTGATGCAATTACCA+GGG | - | chr4_1:702367-702386 | Msa0528020:CDS | 35.0% | |
| ! | GTTTCGTGTTTTTCTTTTCC+TGG | - | chr4_1:702478-702497 | Msa0528020:CDS | 35.0% |
| CCAGCAAAATACAAATGGAA+TGG | + | chr4_1:702558-702577 | None:intergenic | 35.0% | |
| ! | CCATTCCATTTGTATTTTGC+TGG | - | chr4_1:702555-702574 | Msa0528020:five_prime_UTR | 35.0% |
| ! | AGCAAACCCGAATCTGAAAT+CGG | - | chr4_1:695688-695707 | Msa0528020:three_prime_UTR | 40.0% |
| GATGATCCGATTTCAGATTC+GGG | + | chr4_1:695697-695716 | None:intergenic | 40.0% | |
| GGATGATCCGATTTCAGATT+CGG | + | chr4_1:695698-695717 | None:intergenic | 40.0% | |
| ! | AATGGTGATGCGAGTGTATA+TGG | + | chr4_1:695769-695788 | None:intergenic | 40.0% |
| !! | TGTTGTTGATTTGGGGGAAA+TGG | + | chr4_1:695787-695806 | None:intergenic | 40.0% |
| !! | GATCTGTGTTGTTGATTTGG+GGG | + | chr4_1:695793-695812 | None:intergenic | 40.0% |
| TCTAACATCCACCCTAACAA+TGG | - | chr4_1:695811-695830 | Msa0528020:three_prime_UTR | 40.0% | |
| CTAACATCCACCCTAACAAT+GGG | - | chr4_1:695812-695831 | Msa0528020:three_prime_UTR | 40.0% | |
| TAACATCCACCCTAACAATG+GGG | - | chr4_1:695813-695832 | Msa0528020:three_prime_UTR | 40.0% | |
| TACCCCGTTAAAATTCCGAA+AGG | - | chr4_1:696058-696077 | Msa0528020:three_prime_UTR | 40.0% | |
| CATACGACAATTTCCAGCAA+TGG | + | chr4_1:696155-696174 | None:intergenic | 40.0% | |
| ! | TTGTCGTATGTGTCTTGTTG+AGG | - | chr4_1:696165-696184 | Msa0528020:three_prime_UTR | 40.0% |
| AAGAATCTAACCAGGAAGAG+CGG | + | chr4_1:696230-696249 | None:intergenic | 40.0% | |
| GTTGTGTGTAAATGGAGTGT+TGG | - | chr4_1:696347-696366 | Msa0528020:three_prime_UTR | 40.0% | |
| !! | TGTGTAAATGGAGTGTTGGA+TGG | - | chr4_1:696351-696370 | Msa0528020:three_prime_UTR | 40.0% |
| TGGATGGTAAAGAACAACAC+CGG | - | chr4_1:696367-696386 | Msa0528020:three_prime_UTR | 40.0% | |
| AACAAACGCACCCTAAATCA+TGG | + | chr4_1:696449-696468 | None:intergenic | 40.0% | |
| ! | ACCATCTTTTCTCCAATAGG+TGG | + | chr4_1:696719-696738 | None:intergenic | 40.0% |
| ! | AAGGAGAGTATATCAGATGG+AGG | - | chr4_1:696796-696815 | Msa0528020:intron | 40.0% |
| TGGCTACATGTATCAAACAC+CGG | + | chr4_1:696937-696956 | None:intergenic | 40.0% | |
| CTTATTCCACTAAGTGTGGT+TGG | + | chr4_1:696957-696976 | None:intergenic | 40.0% | |
| CAACCACACTTAGTGGAATA+AGG | - | chr4_1:696955-696974 | Msa0528020:intron | 40.0% | |
| !! | AAGCCTTATTCCACTAAGTG+TGG | + | chr4_1:696961-696980 | None:intergenic | 40.0% |
| AGATTGCCCAATTTGTGATC+AGG | - | chr4_1:697574-697593 | Msa0528020:intron | 40.0% | |
| GATTGCCCAATTTGTGATCA+GGG | - | chr4_1:697575-697594 | Msa0528020:intron | 40.0% | |
| TGATCTTCAGGATCAGTCAA+TGG | - | chr4_1:697607-697626 | Msa0528020:intron | 40.0% | |
| CACTGATATGAAGAGATCTG+TGG | - | chr4_1:697655-697674 | Msa0528020:intron | 40.0% | |
| TGATATGAAGAGATCTGTGG+TGG | - | chr4_1:697658-697677 | Msa0528020:intron | 40.0% | |
| GTCATCACAGTCTTTACCAA+AGG | + | chr4_1:697698-697717 | None:intergenic | 40.0% | |
| TGGTAAAGACTGTGATGACA+CGG | - | chr4_1:697699-697718 | Msa0528020:intron | 40.0% | |
| ATAGTTTCCGAGGGAACTTA+CGG | - | chr4_1:697973-697992 | Msa0528020:intron | 40.0% | |
| TAACGACATCTGGTAGCAAT+AGG | - | chr4_1:698113-698132 | Msa0528020:intron | 40.0% | |
| ! | TCTGAGTTCCTTAATGGATC+CGG | - | chr4_1:698228-698247 | Msa0528020:intron | 40.0% |
| GTAATAGATATCTGCCCTGT+AGG | - | chr4_1:698396-698415 | Msa0528020:intron | 40.0% | |
| !! | TTCCGGGCTTTAAATGCAAA+AGG | + | chr4_1:698438-698457 | None:intergenic | 40.0% |
| ! | TTGCATTTAAAGCCCGGAAT+TGG | - | chr4_1:698439-698458 | Msa0528020:intron | 40.0% |
| ! | TGCATTTAAAGCCCGGAATT+GGG | - | chr4_1:698440-698459 | Msa0528020:intron | 40.0% |
| ATTCTTCAACTCCCAATTCC+GGG | + | chr4_1:698454-698473 | None:intergenic | 40.0% | |
| GCATTGTCCTCGTTTAAATG+AGG | - | chr4_1:698547-698566 | Msa0528020:intron | 40.0% | |
| GATCTCAAGCCTTTGGTTAT+GGG | - | chr4_1:699217-699236 | Msa0528020:intron | 40.0% | |
| ACCAGTCTGTAAATGCTATG+GGG | - | chr4_1:699267-699286 | Msa0528020:intron | 40.0% | |
| CTATGGGGATGAGTATTTGA+GGG | - | chr4_1:699282-699301 | Msa0528020:intron | 40.0% | |
| CTTTCAATAGCGTGCTATAG+CGG | - | chr4_1:699536-699555 | Msa0528020:intron | 40.0% | |
| ! | TGGCCCATTTGTTAGACATT+AGG | + | chr4_1:699922-699941 | None:intergenic | 40.0% |
| !!! | GATATTTTGGCGGTAACAAG+GGG | + | chr4_1:700223-700242 | None:intergenic | 40.0% |
| !!! | CGATATTTTGGCGGTAACAA+GGG | + | chr4_1:700224-700243 | None:intergenic | 40.0% |
| !!! | TCGATATTTTGGCGGTAACA+AGG | + | chr4_1:700225-700244 | None:intergenic | 40.0% |
| AATTCGTGACGTTGTGTACA+GGG | + | chr4_1:700638-700657 | None:intergenic | 40.0% | |
| AAATTCGTGACGTTGTGTAC+AGG | + | chr4_1:700639-700658 | None:intergenic | 40.0% | |
| CTTCTAATCCCTGTGTTATG+CGG | - | chr4_1:700683-700702 | Msa0528020:CDS | 40.0% | |
| TTCTAATCCCTGTGTTATGC+GGG | - | chr4_1:700684-700703 | Msa0528020:CDS | 40.0% | |
| CAACTAGTTAAGTTCCAGTG+AGG | - | chr4_1:700725-700744 | Msa0528020:CDS | 40.0% | |
| GATGCGATTTAGTGTTCTCT+GGG | - | chr4_1:700761-700780 | Msa0528020:CDS | 40.0% | |
| CTTCGTTTATGTCCTGCAAT+GGG | + | chr4_1:700865-700884 | None:intergenic | 40.0% | |
| TCTTCGTTTATGTCCTGCAA+TGG | + | chr4_1:700866-700885 | None:intergenic | 40.0% | |
| AACCTCTGCTACCAAAGAAA+GGG | + | chr4_1:701002-701021 | None:intergenic | 40.0% | |
| GCTGGGGTCAAATAATGTAT+GGG | - | chr4_1:701114-701133 | Msa0528020:intron | 40.0% | |
| CTGGGGTCAAATAATGTATG+GGG | - | chr4_1:701115-701134 | Msa0528020:intron | 40.0% | |
| TCAAATAATGTATGGGGCGA+AGG | - | chr4_1:701121-701140 | Msa0528020:intron | 40.0% | |
| !! | CGATTCCTTTTTAGCCCTTT+GGG | - | chr4_1:701330-701349 | Msa0528020:intron | 40.0% |
| AAATCCAGTGCAATCCCAAA+GGG | + | chr4_1:701347-701366 | None:intergenic | 40.0% | |
| TAGAATACGCAAGACTGTCA+CGG | - | chr4_1:701566-701585 | Msa0528020:intron | 40.0% | |
| GATAACGAACATCTTGGTAC+TGG | - | chr4_1:701639-701658 | Msa0528020:intron | 40.0% | |
| CAGCACCAACAATGATAACA+GGG | + | chr4_1:701734-701753 | None:intergenic | 40.0% | |
| ! | CTGTTATCATTGTTGGTGCT+GGG | - | chr4_1:701733-701752 | Msa0528020:intron | 40.0% |
| !! | GATTTTTGAGAGGAAGGATC+AGG | - | chr4_1:701755-701774 | Msa0528020:intron | 40.0% |
| GTTGAAACCATCGCAAAACA+AGG | - | chr4_1:701795-701814 | Msa0528020:intron | 40.0% | |
| GGAATGTCATCAGATCTGAT+TGG | - | chr4_1:701817-701836 | Msa0528020:intron | 40.0% | |
| GTCATCAGATCTGATTGGAA+TGG | - | chr4_1:701822-701841 | Msa0528020:intron | 40.0% | |
| GTTGTTTATCAAGGTCACCA+TGG | - | chr4_1:701996-702015 | Msa0528020:intron | 40.0% | |
| ACTCCCCCAATTGTATCATA+GGG | + | chr4_1:702206-702225 | None:intergenic | 40.0% | |
| AACTCCCCCAATTGTATCAT+AGG | + | chr4_1:702207-702226 | None:intergenic | 40.0% | |
| ! | TACCAGGGCATCAAAGATAA+TGG | - | chr4_1:702382-702401 | Msa0528020:CDS | 40.0% |
| TGCGAGTGTATATGGAGAGT+GGG | + | chr4_1:695761-695780 | None:intergenic | 45.0% | |
| ATGCGAGTGTATATGGAGAG+TGG | + | chr4_1:695762-695781 | None:intergenic | 45.0% | |
| AAAACCTCGATAGCGTCATC+GGG | + | chr4_1:696028-696047 | None:intergenic | 45.0% | |
| GAAAACCTCGATAGCGTCAT+CGG | + | chr4_1:696029-696048 | None:intergenic | 45.0% | |
| CATAGCAGACTTTCCATTGC+TGG | - | chr4_1:696139-696158 | Msa0528020:three_prime_UTR | 45.0% | |
| AGAATCTAACCAGGAAGAGC+GGG | + | chr4_1:696229-696248 | None:intergenic | 45.0% | |
| GCCACCTATTGGAGAAAAGA+TGG | - | chr4_1:696715-696734 | Msa0528020:three_prime_UTR | 45.0% | |
| TGGTAGAAACTCGGCATATG+TGG | - | chr4_1:696735-696754 | Msa0528020:three_prime_UTR | 45.0% | |
| GAGGATAGTCAGATCACTAG+AGG | - | chr4_1:696815-696834 | Msa0528020:intron | 45.0% | |
| AGTCAGATCACTAGAGGTAG+AGG | - | chr4_1:696821-696840 | Msa0528020:intron | 45.0% | |
| ATGTAGCCAACCACACTTAG+TGG | - | chr4_1:696948-696967 | Msa0528020:intron | 45.0% | |
| TCTCGTGCTTTCTTGGCTAT+AGG | + | chr4_1:697518-697537 | None:intergenic | 45.0% | |
| ! | ATAGCCAAGAAAGCACGAGA+AGG | - | chr4_1:697518-697537 | Msa0528020:intron | 45.0% |
| CTCCACCCTGATCACAAATT+GGG | + | chr4_1:697583-697602 | None:intergenic | 45.0% | |
| TCTCCACCCTGATCACAAAT+TGG | + | chr4_1:697584-697603 | None:intergenic | 45.0% | |
| CAGGATCAGTCAATGGCATT+TGG | - | chr4_1:697614-697633 | Msa0528020:intron | 45.0% | |
| CACGGTGCATTCAATGTACA+AGG | - | chr4_1:697717-697736 | Msa0528020:intron | 45.0% | |
| TAGTTTCCGAGGGAACTTAC+GGG | - | chr4_1:697974-697993 | Msa0528020:intron | 45.0% | |
| CATCTGGTAGCAATAGGTGT+TGG | - | chr4_1:698119-698138 | Msa0528020:intron | 45.0% | |
| GCTCCCAAATGTTGAAGGTT+GGG | + | chr4_1:698158-698177 | None:intergenic | 45.0% | |
| TGCGAATCTAACACACCTGT+GGG | + | chr4_1:698271-698290 | None:intergenic | 45.0% | |
| ATGCGAATCTAACACACCTG+TGG | + | chr4_1:698272-698291 | None:intergenic | 45.0% | |
| GTGTGTTAGATTCGCATCAG+AGG | - | chr4_1:698275-698294 | Msa0528020:intron | 45.0% | |
| GTTCAGGATCTTGGCATGTT+AGG | - | chr4_1:698306-698325 | Msa0528020:intron | 45.0% | |
| CTCATGACAAGTGAACTCTC+TGG | - | chr4_1:698369-698388 | Msa0528020:intron | 45.0% | |
| TTGAAGTGAGTGCTCCTACA+GGG | + | chr4_1:698413-698432 | None:intergenic | 45.0% | |
| ! | TTTGAAGTGAGTGCTCCTAC+AGG | + | chr4_1:698414-698433 | None:intergenic | 45.0% |
| TACTTGCGATCTCAAGCCTT+TGG | - | chr4_1:699210-699229 | Msa0528020:intron | 45.0% | |
| CGATCTCAAGCCTTTGGTTA+TGG | - | chr4_1:699216-699235 | Msa0528020:intron | 45.0% | |
| ACGCAATTGCCCATAACCAA+AGG | + | chr4_1:699229-699248 | None:intergenic | 45.0% | |
| GGTTATGGGCAATTGCGTTA+AGG | - | chr4_1:699231-699250 | Msa0528020:intron | 45.0% | |
| TCCCCATAGCATTTACAGAC+TGG | + | chr4_1:699271-699290 | None:intergenic | 45.0% | |
| GCTATGGGGATGAGTATTTG+AGG | - | chr4_1:699281-699300 | Msa0528020:intron | 45.0% | |
| ! | GAAGCACCATTGCAGGAAAA+TGG | + | chr4_1:699595-699614 | None:intergenic | 45.0% |
| ! | CATTGTTGAAGCACCATTGC+AGG | + | chr4_1:699602-699621 | None:intergenic | 45.0% |
| CTGCAATGGTGCTTCAACAA+TGG | - | chr4_1:699600-699619 | Msa0528020:intron | 45.0% | |
| !! | ATGATAGTGGCCGCAAATAG+CGG | - | chr4_1:699625-699644 | Msa0528020:intron | 45.0% |
| CATGTTTCCACCGCTATTTG+CGG | + | chr4_1:699638-699657 | None:intergenic | 45.0% | |
| GTGGAAACATGACTCAATCG+CGG | - | chr4_1:699647-699666 | Msa0528020:intron | 45.0% | |
| TGGAAACATGACTCAATCGC+GGG | - | chr4_1:699648-699667 | Msa0528020:intron | 45.0% | |
| GTTTCTTCACAACATGAGGG+TGG | + | chr4_1:699713-699732 | None:intergenic | 45.0% | |
| TGACTGATGTAGTGTTGCAG+AGG | - | chr4_1:699783-699802 | Msa0528020:CDS | 45.0% | |
| GACTTGGGAATCTATGCACA+CGG | + | chr4_1:700615-700634 | None:intergenic | 45.0% | |
| ATTCGTGACGTTGTGTACAG+GGG | + | chr4_1:700637-700656 | None:intergenic | 45.0% | |
| TCTAATCCCTGTGTTATGCG+GGG | - | chr4_1:700685-700704 | Msa0528020:CDS | 45.0% | |
| TTGATTCCCCGCATAACACA+GGG | + | chr4_1:700694-700713 | None:intergenic | 45.0% | |
| CGATGCGATTTAGTGTTCTC+TGG | - | chr4_1:700760-700779 | Msa0528020:CDS | 45.0% | |
| TTGTTCCACTTTCCCATTGC+AGG | - | chr4_1:700850-700869 | Msa0528020:intron | 45.0% | |
| TATGTCCTGCAATGGGAAAG+TGG | + | chr4_1:700858-700877 | None:intergenic | 45.0% | |
| TGCAGGACATAAACGAAGAG+TGG | - | chr4_1:700867-700886 | Msa0528020:intron | 45.0% | |
| ATGATGGTTTGAAGAGGCAG+AGG | - | chr4_1:700915-700934 | Msa0528020:intron | 45.0% | |
| CATCAGGACCACGAATCATA+GGG | + | chr4_1:700949-700968 | None:intergenic | 45.0% | |
| CAACCTCTGCTACCAAAGAA+AGG | + | chr4_1:701003-701022 | None:intergenic | 45.0% | |
| GGCTGGGGTCAAATAATGTA+TGG | - | chr4_1:701113-701132 | Msa0528020:intron | 45.0% | |
| AATGTATGGGGCGAAGGAAT+TGG | - | chr4_1:701127-701146 | Msa0528020:intron | 45.0% | |
| GAAAGCAGATGCTTTCCTGT+TGG | - | chr4_1:701213-701232 | Msa0528020:intron | 45.0% | |
| !! | GCGATTCCTTTTTAGCCCTT+TGG | - | chr4_1:701329-701348 | Msa0528020:intron | 45.0% |
| GCAATCCCAAAGGGCTAAAA+AGG | + | chr4_1:701338-701357 | None:intergenic | 45.0% | |
| GAAATCCAGTGCAATCCCAA+AGG | + | chr4_1:701348-701367 | None:intergenic | 45.0% | |
| CACTTCCAAATTTGCAGCCA+CGG | - | chr4_1:701520-701539 | Msa0528020:intron | 45.0% | |
| ACTTCCAAATTTGCAGCCAC+GGG | - | chr4_1:701521-701540 | Msa0528020:intron | 45.0% | |
| AAGCCAAGGTCGGTTACATT+GGG | - | chr4_1:701595-701614 | Msa0528020:intron | 45.0% | |
| CCAGCACCAACAATGATAAC+AGG | + | chr4_1:701735-701754 | None:intergenic | 45.0% | |
| CCTGTTATCATTGTTGGTGC+TGG | - | chr4_1:701732-701751 | Msa0528020:intron | 45.0% | |
| !!! | TTGGTGCTGGGATTTTTGAG+AGG | - | chr4_1:701745-701764 | Msa0528020:intron | 45.0% |
| !! | TGCTGGGATTTTTGAGAGGA+AGG | - | chr4_1:701749-701768 | Msa0528020:intron | 45.0% |
| !!! | GACATTCCCTTGTTTTGCGA+TGG | + | chr4_1:701805-701824 | None:intergenic | 45.0% |
| GGGAGCTGATGATACAAACT+TGG | - | chr4_1:701950-701969 | Msa0528020:intron | 45.0% | |
| AAACTTGGACAAGATCCCGA+AGG | - | chr4_1:701965-701984 | Msa0528020:intron | 45.0% | |
| AAGGATGCACACAGCAAACA+TGG | - | chr4_1:702099-702118 | Msa0528020:intron | 45.0% | |
| TTGGAGACTCCAGAGATGAT+TGG | - | chr4_1:702138-702157 | Msa0528020:CDS | 45.0% | |
| !! | AAGGTTGGTCTCAGTGAAGA+TGG | + | chr4_1:702296-702315 | None:intergenic | 45.0% |
| GAGACCAACCTTCACTAAGA+AGG | - | chr4_1:702304-702323 | Msa0528020:CDS | 45.0% | |
| ACCAACCTTCACTAAGAAGG+TGG | - | chr4_1:702307-702326 | Msa0528020:CDS | 45.0% | |
| TCCACCTTCTTAGTGAAGGT+TGG | + | chr4_1:702311-702330 | None:intergenic | 45.0% | |
| TGGATCCACCTTCTTAGTGA+AGG | + | chr4_1:702315-702334 | None:intergenic | 45.0% | |
| AAGGTGGATCCATCACCATT+CGG | - | chr4_1:702323-702342 | Msa0528020:CDS | 45.0% | |
| AGCCATTATCTTTGATGCCC+TGG | + | chr4_1:702387-702406 | None:intergenic | 45.0% | |
| TATCGTACTATCCGCAAGCA+AGG | + | chr4_1:702514-702533 | None:intergenic | 45.0% | |
| GGACTAACCCGAATTGTACA+TGG | + | chr4_1:702610-702629 | None:intergenic | 45.0% | |
| !! | ATATATATATATAAATTAAG+TGG | - | chr4_1:697931-697950 | Msa0528020:intron | 5.0% |
| GCGAGTGTATATGGAGAGTG+GGG | + | chr4_1:695760-695779 | None:intergenic | 50.0% | |
| TCCACCCTAACAATGGGGTT+TGG | - | chr4_1:695818-695837 | Msa0528020:three_prime_UTR | 50.0% | |
| ACCAAACCCCATTGTTAGGG+TGG | + | chr4_1:695822-695841 | None:intergenic | 50.0% | |
| !! | GTTTGGTGGTGATTGAACGG+AGG | + | chr4_1:695898-695917 | None:intergenic | 50.0% |
| !! | CGGGTTTGGTGGTGATTGAA+CGG | + | chr4_1:695901-695920 | None:intergenic | 50.0% |
| !! | ACGAGAGGTTGTTCAGGTTG+GGG | + | chr4_1:695953-695972 | None:intergenic | 50.0% |
| ! | GACGAGAGGTTGTTCAGGTT+GGG | + | chr4_1:695954-695973 | None:intergenic | 50.0% |
| AGATCGACGAGAGGTTGTTC+AGG | + | chr4_1:695959-695978 | None:intergenic | 50.0% | |
| TCGATAGCGTCATCGGGATT+GGG | + | chr4_1:696022-696041 | None:intergenic | 50.0% | |
| ! | GCTATCGAGGTTTTCGTCGA+TGG | - | chr4_1:696034-696053 | Msa0528020:three_prime_UTR | 50.0% |
| CTCTGTTCTTCAAGCGTGTG+AGG | - | chr4_1:696084-696103 | Msa0528020:three_prime_UTR | 50.0% | |
| CACTCCTTCTCGTGCTTTCT+TGG | + | chr4_1:697525-697544 | None:intergenic | 50.0% | |
| ! | GAAAGCACGAGAAGGAGTGA+TGG | - | chr4_1:697526-697545 | Msa0528020:intron | 50.0% |
| TGCCCAATTTGTGATCAGGG+TGG | - | chr4_1:697578-697597 | Msa0528020:intron | 50.0% | |
| !! | ATGGCATTTGGCTCTGATCG+TGG | - | chr4_1:697626-697645 | Msa0528020:intron | 50.0% |
| AGTTGACCCGTAAGTTCCCT+CGG | + | chr4_1:697983-698002 | None:intergenic | 50.0% | |
| ACTTGCTCTCATGTCAGCTC+AGG | - | chr4_1:698063-698082 | Msa0528020:intron | 50.0% | |
| CTTGCTCTCATGTCAGCTCA+GGG | - | chr4_1:698064-698083 | Msa0528020:intron | 50.0% | |
| GGCTCCCAAATGTTGAAGGT+TGG | + | chr4_1:698159-698178 | None:intergenic | 50.0% | |
| GGATGGCTCCCAAATGTTGA+AGG | + | chr4_1:698163-698182 | None:intergenic | 50.0% | |
| AGATTCGCATCAGAGGTTGC+AGG | - | chr4_1:698282-698301 | Msa0528020:intron | 50.0% | |
| GATTCGCATCAGAGGTTGCA+GGG | - | chr4_1:698283-698302 | Msa0528020:intron | 50.0% | |
| ATTCGCATCAGAGGTTGCAG+GGG | - | chr4_1:698284-698303 | Msa0528020:intron | 50.0% | |
| GATCTTGGCATGTTAGGTCG+TGG | - | chr4_1:698312-698331 | Msa0528020:intron | 50.0% | |
| !! | CGTGGTAGTGGAGAAGAGAT+TGG | - | chr4_1:698330-698349 | Msa0528020:intron | 50.0% |
| AGGACAATGCGCATGACTTC+AGG | + | chr4_1:698537-698556 | None:intergenic | 50.0% | |
| TGCAGGAAAATGGCTTCGCA+GGG | + | chr4_1:699585-699604 | None:intergenic | 50.0% | |
| TTGCAGGAAAATGGCTTCGC+AGG | + | chr4_1:699586-699605 | None:intergenic | 50.0% | |
| !! | GCGAAGCCATTTTCCTGCAA+TGG | - | chr4_1:699586-699605 | Msa0528020:intron | 50.0% |
| GACGAAAATATGCAGGGGCA+CGG | - | chr4_1:699760-699779 | Msa0528020:intron | 50.0% | |
| !!! | AGTGTTGCAGAGGTGCCTTT+TGG | - | chr4_1:699793-699812 | Msa0528020:CDS | 50.0% |
| TCTCCCAAGTCTCACTGTCA+GGG | + | chr4_1:700585-700604 | None:intergenic | 50.0% | |
| ACGTTGTGTACAGGGGACTT+GGG | + | chr4_1:700630-700649 | None:intergenic | 50.0% | |
| ! | GTTGATTCCCCGCATAACAC+AGG | + | chr4_1:700695-700714 | None:intergenic | 50.0% |
| CCATCAGGACCACGAATCAT+AGG | + | chr4_1:700950-700969 | None:intergenic | 50.0% | |
| CCTATGATTCGTGGTCCTGA+TGG | - | chr4_1:700947-700966 | Msa0528020:intron | 50.0% | |
| GCCAGTTCACAGGCTTAAAG+CGG | + | chr4_1:700973-700992 | None:intergenic | 50.0% | |
| ! | AGCCCTTTCTTTGGTAGCAG+AGG | - | chr4_1:700997-701016 | Msa0528020:intron | 50.0% |
| GCAGATGCTTTCCTGTTGGT+TGG | - | chr4_1:701217-701236 | Msa0528020:intron | 50.0% | |
| !! | TTAGCCCTTTGGGATTGCAC+TGG | - | chr4_1:701340-701359 | Msa0528020:intron | 50.0% |
| CAATGTAACCGACCTTGGCT+TGG | + | chr4_1:701596-701615 | None:intergenic | 50.0% | |
| CAAGCCAAGGTCGGTTACAT+TGG | - | chr4_1:701594-701613 | Msa0528020:intron | 50.0% | |
| ATTACTTCTCCATGCTGCCC+AGG | - | chr4_1:701854-701873 | Msa0528020:intron | 50.0% | |
| TTCTCACTGAATGCAGCTGC+TGG | + | chr4_1:702056-702075 | None:intergenic | 50.0% | |
| AGCAGCTGCATTCAGTGAGA+AGG | - | chr4_1:702055-702074 | Msa0528020:intron | 50.0% | |
| GCTGCATTCAGTGAGAAGGA+AGG | - | chr4_1:702059-702078 | Msa0528020:intron | 50.0% | |
| TCTCCAACTGTTGGAACTGC+AGG | + | chr4_1:702125-702144 | None:intergenic | 50.0% | |
| !! | TCTCTGGAGTCTCCAACTGT+TGG | + | chr4_1:702134-702153 | None:intergenic | 50.0% |
| TAAACGCACCCCTGCTATCT+CGG | + | chr4_1:702183-702202 | None:intergenic | 50.0% | |
| TCGTCCATTTGCGCAAGGTT+TGG | + | chr4_1:702254-702273 | None:intergenic | 50.0% | |
| AGTGAAGATGGCAATGCAGC+TGG | + | chr4_1:702284-702303 | None:intergenic | 50.0% | |
| AGGTGGATCCATCACCATTC+GGG | - | chr4_1:702324-702343 | Msa0528020:CDS | 50.0% | |
| TCCATCACCATTCGGGATTG+CGG | - | chr4_1:702331-702350 | Msa0528020:CDS | 50.0% | |
| TTCTCAACCGCAATCCCGAA+TGG | + | chr4_1:702341-702360 | None:intergenic | 50.0% | |
| !! | GGTGGTGGTGGTTTGACGAA+AGG | + | chr4_1:695861-695880 | None:intergenic | 55.0% |
| TGATTGAACGGAGGAGGAGG+AGG | + | chr4_1:695889-695908 | None:intergenic | 55.0% | |
| TGGTGATTGAACGGAGGAGG+AGG | + | chr4_1:695892-695911 | None:intergenic | 55.0% | |
| ! | TGGTGGTGATTGAACGGAGG+AGG | + | chr4_1:695895-695914 | None:intergenic | 55.0% |
| ! | TTTGCGGAGTTCGGGTTTGG+TGG | + | chr4_1:695912-695931 | None:intergenic | 55.0% |
| !! | TTGTTCAGGTTGGGGCTGAG+CGG | + | chr4_1:695945-695964 | None:intergenic | 55.0% |
| CGACGAGAGGTTGTTCAGGT+TGG | + | chr4_1:695955-695974 | None:intergenic | 55.0% | |
| ATGTACTCTAGCGCCAGCGA+CGG | + | chr4_1:695996-696015 | None:intergenic | 55.0% | |
| CGATAGCGTCATCGGGATTG+GGG | + | chr4_1:696021-696040 | None:intergenic | 55.0% | |
| CTCGATAGCGTCATCGGGAT+TGG | + | chr4_1:696023-696042 | None:intergenic | 55.0% | |
| CAATCCCGATGACGCTATCG+AGG | - | chr4_1:696021-696040 | Msa0528020:three_prime_UTR | 55.0% | |
| CTTCAAGCGTGTGAGGTTGC+TGG | - | chr4_1:696091-696110 | Msa0528020:three_prime_UTR | 55.0% | |
| GCGCAAGAAGCAACAGGCTT+AGG | + | chr4_1:696202-696221 | None:intergenic | 55.0% | |
| GAGTTGGGGTAGCCACCTAT+TGG | - | chr4_1:696704-696723 | Msa0528020:three_prime_UTR | 55.0% | |
| ! | GGGTGGAGAGTGTGATCTTC+AGG | - | chr4_1:697595-697614 | Msa0528020:intron | 55.0% |
| ATCAGAGGTTGCAGGGGTTC+AGG | - | chr4_1:698290-698309 | Msa0528020:intron | 55.0% | |
| GTTGCAGGGGTTCAGGATCT+TGG | - | chr4_1:698297-698316 | Msa0528020:intron | 55.0% | |
| GGCATGTTAGGTCGTGGTAG+TGG | - | chr4_1:698318-698337 | Msa0528020:intron | 55.0% | |
| TCACTAGGGTCGCAGTGAAC+AGG | - | chr4_1:699447-699466 | Msa0528020:intron | 55.0% | |
| CACTAGGGTCGCAGTGAACA+GGG | - | chr4_1:699448-699467 | Msa0528020:intron | 55.0% | |
| ! | CGTGCTATAGCGGAATAGCG+TGG | - | chr4_1:699546-699565 | Msa0528020:intron | 55.0% |
| ! | ATAGCGGAATAGCGTGGCGA+AGG | - | chr4_1:699552-699571 | Msa0528020:intron | 55.0% |
| GCAGGAAAATGGCTTCGCAG+GGG | + | chr4_1:699584-699603 | None:intergenic | 55.0% | |
| ATAGTGGCCGCAAATAGCGG+TGG | - | chr4_1:699628-699647 | Msa0528020:intron | 55.0% | |
| TGAGGGTGGTAGCCGGAAAA+CGG | + | chr4_1:699699-699718 | None:intergenic | 55.0% | |
| CACAACATGAGGGTGGTAGC+CGG | + | chr4_1:699706-699725 | None:intergenic | 55.0% | |
| CCAAGTCTCACTGTCAGGGA+CGG | + | chr4_1:700581-700600 | None:intergenic | 55.0% | |
| CGTCCCTGACAGTGAGACTT+GGG | - | chr4_1:700579-700598 | Msa0528020:intron | 55.0% | |
| CTCTCCCAAGTCTCACTGTC+AGG | + | chr4_1:700586-700605 | None:intergenic | 55.0% | |
| GACGTTGTGTACAGGGGACT+TGG | + | chr4_1:700631-700650 | None:intergenic | 55.0% | |
| ACAGGCTTAAAGCGGCCATC+AGG | + | chr4_1:700965-700984 | None:intergenic | 55.0% | |
| ! | GCCGCTTTAAGCCTGTGAAC+TGG | - | chr4_1:700969-700988 | Msa0528020:intron | 55.0% |
| CTGGCGTGAAGCCCTTTCTT+TGG | - | chr4_1:700988-701007 | Msa0528020:intron | 55.0% | |
| ! | TTTCCTGTTGGTTGGCACCC+AGG | - | chr4_1:701225-701244 | Msa0528020:intron | 55.0% |
| ATACCTGGGTGCCAACCAAC+AGG | + | chr4_1:701231-701250 | None:intergenic | 55.0% | |
| TCCAAATTTGCAGCCACGGG+TGG | - | chr4_1:701524-701543 | Msa0528020:intron | 55.0% | |
| TCCACCCGTGGCTGCAAATT+TGG | + | chr4_1:701528-701547 | None:intergenic | 55.0% | |
| TGTCACGGCAAACCAAGCCA+AGG | - | chr4_1:701581-701600 | Msa0528020:intron | 55.0% | |
| ACGGCAAACCAAGCCAAGGT+CGG | - | chr4_1:701585-701604 | Msa0528020:intron | 55.0% | |
| AGGCCCAATGTAACCGACCT+TGG | + | chr4_1:701601-701620 | None:intergenic | 55.0% | |
| AAGGTCAAGTGCAGCAGCCT+GGG | + | chr4_1:701874-701893 | None:intergenic | 55.0% | |
| CAGATTGGGGCACAAGTCCA+AGG | + | chr4_1:701893-701912 | None:intergenic | 55.0% | |
| TGGCCTGCAGTTCCAACAGT+TGG | - | chr4_1:702119-702138 | Msa0528020:CDS | 55.0% | |
| GAGCTCTGTCCGAGATAGCA+GGG | - | chr4_1:702171-702190 | Msa0528020:CDS | 55.0% | |
| AGCTCTGTCCGAGATAGCAG+GGG | - | chr4_1:702172-702191 | Msa0528020:CDS | 55.0% | |
| TTGGCGCTACAGTCCTCAGT+CGG | + | chr4_1:702235-702254 | None:intergenic | 55.0% | |
| AGCGCCAAACCTTGCGCAAA+TGG | - | chr4_1:702247-702266 | Msa0528020:CDS | 55.0% | |
| CTCTCTCGTCCATTTGCGCA+AGG | + | chr4_1:702259-702278 | None:intergenic | 55.0% | |
| ACCGCAATCCCGAATGGTGA+TGG | + | chr4_1:702335-702354 | None:intergenic | 55.0% | |
| AAGCAAGGTCTTGCTTGGCC+AGG | + | chr4_1:702499-702518 | None:intergenic | 55.0% | |
| GCCAAGCAAGACCTTGCTTG+CGG | - | chr4_1:702500-702519 | Msa0528020:exon | 55.0% | |
| TCCGCAAGCAAGGTCTTGCT+TGG | + | chr4_1:702504-702523 | None:intergenic | 55.0% | |
| TTGAACGGAGGAGGAGGAGG+CGG | + | chr4_1:695886-695905 | None:intergenic | 60.0% | |
| ! | GGGTTTGCGGAGTTCGGGTT+TGG | + | chr4_1:695915-695934 | None:intergenic | 60.0% |
| ! | GGTTCGGGTTTGCGGAGTTC+GGG | + | chr4_1:695920-695939 | None:intergenic | 60.0% |
| ! | GGGTTCGGGTTTGCGGAGTT+CGG | + | chr4_1:695921-695940 | None:intergenic | 60.0% |
| TGTACTCTAGCGCCAGCGAC+GGG | + | chr4_1:695995-696014 | None:intergenic | 60.0% | |
| GGCATGGCGCAAGAAGCAAC+AGG | + | chr4_1:696208-696227 | None:intergenic | 60.0% | |
| CTAACCAGGAAGAGCGGGCA+TGG | + | chr4_1:696224-696243 | None:intergenic | 60.0% | |
| ATGTCAGCTCAGGGCCAGCT+AGG | - | chr4_1:698073-698092 | Msa0528020:intron | 60.0% | |
| AGGGTCGCAGTGAACAGGGA+CGG | - | chr4_1:699452-699471 | Msa0528020:intron | 60.0% | |
| AACGGCAGGAGCCCTAGAAG+CGG | + | chr4_1:699681-699700 | None:intergenic | 60.0% | |
| !!! | CTAGGGCTCCTGCCGTTTTC+CGG | - | chr4_1:699684-699703 | Msa0528020:intron | 60.0% |
| CCGTCCCTGACAGTGAGACT+TGG | - | chr4_1:700578-700597 | Msa0528020:intron | 60.0% | |
| AGGGCTTCACGCCAGTTCAC+AGG | + | chr4_1:700983-701002 | None:intergenic | 60.0% | |
| ACCATAGCAGCTTCCACCCG+TGG | + | chr4_1:701540-701559 | None:intergenic | 60.0% | |
| CAAGGTCAAGTGCAGCAGCC+TGG | + | chr4_1:701875-701894 | None:intergenic | 60.0% | |
| CAGGCTGCTGCACTTGACCT+TGG | - | chr4_1:701873-701892 | Msa0528020:intron | 60.0% | |
| CGAGCTCTGTCCGAGATAGC+AGG | - | chr4_1:702170-702189 | Msa0528020:CDS | 60.0% | |
| TGGCGCTACAGTCCTCAGTC+GGG | + | chr4_1:702234-702253 | None:intergenic | 60.0% | |
| TGAACGGAGGAGGAGGAGGC+GGG | + | chr4_1:695885-695904 | None:intergenic | 65.0% | |
| !! | TTCAGGTTGGGGCTGAGCGG+CGG | + | chr4_1:695942-695961 | None:intergenic | 65.0% |
| CGGGGAGTGAGATCGACGAG+AGG | + | chr4_1:695968-695987 | None:intergenic | 65.0% | |
| TAGCGCCAGCGACGGGTGTA+CGG | + | chr4_1:695988-696007 | None:intergenic | 65.0% | |
| GCGGAATAGCGTGGCGAAGG+AGG | - | chr4_1:699555-699574 | Msa0528020:intron | 65.0% | |
| GGTGGTAGCCGGAAAACGGC+AGG | + | chr4_1:699695-699714 | None:intergenic | 65.0% | |
| GCCACGGGTGGAAGCTGCTA+TGG | - | chr4_1:701536-701555 | Msa0528020:intron | 65.0% | |
| ! | GAGCGGCGGGTTCGGGTTTG+CGG | + | chr4_1:695928-695947 | None:intergenic | 70.0% |
| ! | TTGGGGCTGAGCGGCGGGTT+CGG | + | chr4_1:695936-695955 | None:intergenic | 70.0% |
| !! | TCAGGTTGGGGCTGAGCGGC+GGG | + | chr4_1:695941-695960 | None:intergenic | 70.0% |
| ACTCCCCGTACACCCGTCGC+TGG | - | chr4_1:695980-695999 | Msa0528020:three_prime_UTR | 70.0% | |
| AGCGCCAGCGACGGGTGTAC+GGG | + | chr4_1:695987-696006 | None:intergenic | 70.0% | |
| TGCGCCATGCCCGCTCTTCC+TGG | - | chr4_1:696217-696236 | Msa0528020:three_prime_UTR | 70.0% | |
| GTGCAGCAGCCTGGGCAGCA+TGG | + | chr4_1:701866-701885 | None:intergenic | 70.0% | |
| !! | GAGGAGGCGGGTGGTGGTGG+TGG | + | chr4_1:695873-695892 | None:intergenic | 75.0% |
| ! | GAGGAGGAGGCGGGTGGTGG+TGG | + | chr4_1:695876-695895 | None:intergenic | 75.0% |
| GAGGAGGAGGAGGCGGGTGG+TGG | + | chr4_1:695879-695898 | None:intergenic | 75.0% | |
| ACGGAGGAGGAGGAGGCGGG+TGG | + | chr4_1:695882-695901 | None:intergenic | 75.0% | |
| ! | TGGGGCTGAGCGGCGGGTTC+GGG | + | chr4_1:695935-695954 | None:intergenic | 75.0% |
| GCGCCAGCGACGGGTGTACG+GGG | + | chr4_1:695986-696005 | None:intergenic | 75.0% | |
| GGGGAGTTCGCGCCCGACTG+AGG | - | chr4_1:702219-702238 | Msa0528020:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 695675 | 702664 | 695675 | ID=Msa0528020;Name=Msa0528020 |
| chr4_1 | mRNA | 695675 | 702664 | 695675 | ID=Msa0528020-mRNA-1;Parent=Msa0528020;Name=Msa0528020-mRNA-1;_AED=0.02;_eAED=0.02;_QI=155|1|1|1|0.6|0.5|6|1486|314 |
| chr4_1 | exon | 695675 | 695740 | 695675 | ID=Msa0528020-mRNA-1:exon:184;Parent=Msa0528020-mRNA-1 |
| chr4_1 | exon | 695763 | 696802 | 695763 | ID=Msa0528020-mRNA-1:exon:183;Parent=Msa0528020-mRNA-1 |
| chr4_1 | exon | 697093 | 697467 | 697093 | ID=Msa0528020-mRNA-1:exon:182;Parent=Msa0528020-mRNA-1 |
| chr4_1 | exon | 699771 | 700064 | 699771 | ID=Msa0528020-mRNA-1:exon:181;Parent=Msa0528020-mRNA-1 |
| chr4_1 | exon | 700601 | 700847 | 700601 | ID=Msa0528020-mRNA-1:exon:180;Parent=Msa0528020-mRNA-1 |
| chr4_1 | exon | 702101 | 702664 | 702101 | ID=Msa0528020-mRNA-1:exon:179;Parent=Msa0528020-mRNA-1 |
| chr4_1 | five_prime_UTR | 702510 | 702664 | 702510 | ID=Msa0528020-mRNA-1:five_prime_utr;Parent=Msa0528020-mRNA-1 |
| chr4_1 | CDS | 702101 | 702509 | 702101 | ID=Msa0528020-mRNA-1:cds;Parent=Msa0528020-mRNA-1 |
| chr4_1 | CDS | 700601 | 700847 | 700601 | ID=Msa0528020-mRNA-1:cds;Parent=Msa0528020-mRNA-1 |
| chr4_1 | CDS | 699776 | 700064 | 699776 | ID=Msa0528020-mRNA-1:cds;Parent=Msa0528020-mRNA-1 |
| chr4_1 | three_prime_UTR | 699771 | 699775 | 699771 | ID=Msa0528020-mRNA-1:three_prime_utr;Parent=Msa0528020-mRNA-1 |
| chr4_1 | three_prime_UTR | 697093 | 697467 | 697093 | ID=Msa0528020-mRNA-1:three_prime_utr;Parent=Msa0528020-mRNA-1 |
| chr4_1 | three_prime_UTR | 695763 | 696802 | 695763 | ID=Msa0528020-mRNA-1:three_prime_utr;Parent=Msa0528020-mRNA-1 |
| chr4_1 | three_prime_UTR | 695675 | 695740 | 695675 | ID=Msa0528020-mRNA-1:three_prime_utr;Parent=Msa0528020-mRNA-1 |
| Gene Sequence |
| Protein sequence |
