AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0528610


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0528610 MtrunA17_Chr8g0360501 100.000 343 0 0 1 343 1 343 0.0 690
Msa0528610 MtrunA17_Chr5g0400691 66.026 312 105 1 29 340 45 355 5.34e-147 419
Msa0528610 MtrunA17_Chr4g0060781 61.250 320 121 2 26 343 85 403 2.91e-139 401
Msa0528610 MtrunA17_Chr4g0049321 64.103 312 111 1 29 340 43 353 4.51e-139 398
Msa0528610 MtrunA17_Chr8g0381211 52.113 71 31 2 256 326 419 486 5.08e-14 72.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0528610 AT3G15020.1 83.090 343 56 2 1 343 1 341 0.0 581
Msa0528610 AT1G53240.1 82.216 343 59 2 1 343 1 341 0.0 578
Msa0528610 AT3G15020.2 83.168 303 49 2 1 303 1 301 0.0 514
Msa0528610 AT2G22780.1 64.762 315 110 1 29 343 41 354 5.72e-145 414
Msa0528610 AT3G47520.1 59.104 335 132 3 8 338 58 391 4.56e-137 395
Msa0528610 AT5G09660.2 64.744 312 109 1 29 340 20 330 1.36e-132 381
Msa0528610 AT5G09660.1 64.744 312 109 1 29 340 41 351 2.50e-132 382
Msa0528610 AT5G09660.5 64.744 312 108 2 29 340 41 350 1.62e-130 377
Msa0528610 AT5G09660.3 66.541 266 89 0 29 294 20 285 8.31e-112 329
Msa0528610 AT5G09660.4 66.541 266 89 0 29 294 41 306 1.00e-111 329

Find 165 sgRNAs with CRISPR-Local

Find 670 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTACAAGCATCAACTATTT+TGG 0.053862 4_1:+1457990 None:intergenic
ACGAGTCATTCCAGGCTTTC+TGG 0.199155 4_1:+1456437 None:intergenic
AATCTCTACTCGCAATAAAT+TGG 0.237446 4_1:-1457954 Msa0528610:five_prime_UTR
AAATTTGATTCGGTTCTAAA+TGG 0.244498 4_1:+1454451 None:intergenic
ATACATTTCTGGCAGGTTAC+TGG 0.259383 4_1:-1454480 Msa0528610:three_prime_UTR
AGATCTAAACCAAAATAAAA+TGG 0.281643 4_1:+1454150 None:intergenic
GCTTGCCTCAAAGGTCTTAA+TGG 0.290402 4_1:-1454924 Msa0528610:CDS
AATATAAATAAGAAATAAAA+AGG 0.291651 4_1:+1454197 None:intergenic
AAAGTGGTTATAAAATTATT+AGG 0.296327 4_1:-1454124 Msa0528610:three_prime_UTR
GAATGGTGTAGAGGAAATTC+TGG 0.304636 4_1:-1454615 Msa0528610:CDS
TCGAACATGTCATACATTTC+TGG 0.317383 4_1:-1454491 Msa0528610:three_prime_UTR
AGAAAAGAATTGTATAAGAT+AGG 0.319794 4_1:+1453994 None:intergenic
TTACAACTCTTGATGTAGTT+AGG 0.320658 4_1:-1455721 Msa0528610:CDS
CAACCTCTGTTCCTCCATCT+TGG 0.327215 4_1:+1455174 None:intergenic
GAGGCAAGCATCAGCAAATA+TGG 0.328154 4_1:+1454938 None:intergenic
TACGACGAGAAGAGATTGTT+TGG 0.338064 4_1:-1455746 Msa0528610:CDS
TCTGGATGATGATGTCATTA+AGG 0.345680 4_1:-1455213 Msa0528610:CDS
TGTATGACATGTTCGATTAC+TGG 0.355821 4_1:+1454498 None:intergenic
CTTTCTCTTTATGATATTGC+TGG 0.358856 4_1:-1457663 Msa0528610:CDS
GGCTTTCTGGGCACGCCGGC+AGG 0.365332 4_1:+1456450 None:intergenic
CAGATTTAATTATTAAATCT+AGG 0.369909 4_1:+1454351 None:intergenic
GAACGCAAGGTGGCCATTCT+CGG 0.375746 4_1:-1457750 Msa0528610:CDS
GGCATCACCTCAAGCCAATC+TGG 0.378443 4_1:-1455231 Msa0528610:CDS
GCCACCTTGCGTTCAGGAAC+CGG 0.381271 4_1:+1457759 None:intergenic
GAAAAGAATTGTATAAGATA+GGG 0.382735 4_1:+1453995 None:intergenic
CATGTTTCTTGCAGTTATGC+TGG 0.385172 4_1:-1454963 Msa0528610:intron
ATTGGCCTTTCCATTCATAA+TGG 0.385465 4_1:-1454281 Msa0528610:three_prime_UTR
TCTCCCTCTCTCTCTATTCT+CGG 0.385732 4_1:-1457879 Msa0528610:five_prime_UTR
AACCTCTGTTCCTCCATCTT+GGG 0.392469 4_1:+1455175 None:intergenic
ACAATTGTTTGTAATGTTGC+CGG 0.399363 4_1:-1454416 Msa0528610:three_prime_UTR
AAAGCTAATGTTCCAGTTGC+GGG 0.399522 4_1:-1455677 Msa0528610:intron
ACACTTTACATACCCGCAAC+TGG 0.402277 4_1:+1455665 None:intergenic
TGCGGAACCCTTTCCAGCCT+TGG 0.405924 4_1:+1455145 None:intergenic
AGGAAGTTCAGCAATGAGAT+TGG 0.408221 4_1:+1454866 None:intergenic
CAAGAACAGTTTATTGCTGC+AGG 0.409718 4_1:-1454328 Msa0528610:three_prime_UTR
TGGAAAGGCCAATCTAAAAC+TGG 0.411828 4_1:+1454291 None:intergenic
CTCGGTGCCGCCGGTGGGAT+CGG 0.412931 4_1:-1457732 Msa0528610:CDS
CCTGCATGGCCTCCTATAAC+AGG 0.414819 4_1:+1455385 None:intergenic
AGATGAGCTTGGAAAAGCTT+TGG 0.416154 4_1:-1456496 Msa0528610:CDS
TGAATTTGCAAAATTTGATT+CGG 0.416301 4_1:+1454441 None:intergenic
ACGACGAGAAGAGATTGTTT+GGG 0.422259 4_1:-1455745 Msa0528610:CDS
TTGAAAACCTCAGCAGCAAT+GGG 0.424506 4_1:+1455782 None:intergenic
GCCGGCGTGCCCAGAAAGCC+TGG 0.425749 4_1:-1456447 Msa0528610:CDS
CGAGTCATTCCAGGCTTTCT+GGG 0.427884 4_1:+1456438 None:intergenic
TACGAGCACTCAACAACATC+TGG 0.433263 4_1:+1454897 None:intergenic
CAGCAATATCATAAAGAGAA+AGG 0.433801 4_1:+1457664 None:intergenic
AACTGTCCCCATTGCTGCTG+AGG 0.435457 4_1:-1455789 Msa0528610:CDS
TATGATATTGCTGGTACCCC+TGG 0.437304 4_1:-1457654 Msa0528610:CDS
GCCATTCTCGGTGCCGCCGG+TGG 0.439694 4_1:-1457738 Msa0528610:CDS
TTCATATACTATGCAATTGA+AGG 0.442028 4_1:-1454239 Msa0528610:three_prime_UTR
GAGGTCAATGTACCTGTTAT+AGG 0.443809 4_1:-1455397 Msa0528610:CDS
AGAATGGCCACCTTGCGTTC+AGG 0.443817 4_1:+1457753 None:intergenic
AATGGCCCTTCACTAATGTA+TGG 0.448464 4_1:-1454263 Msa0528610:three_prime_UTR
CAGGTGAGGATTGGGAAGAA+TGG 0.448697 4_1:-1454632 Msa0528610:CDS
AGATCATCACGAGTCATTCC+AGG 0.455102 4_1:+1456429 None:intergenic
ACTTCCTTTCTTTGCTTCCA+AGG 0.457724 4_1:-1454850 Msa0528610:intron
GTTATAAAATTATTAGGCTC+AGG 0.462923 4_1:-1454118 Msa0528610:three_prime_UTR
TGAAAAGGGTACCTGAGATC+TGG 0.463834 4_1:+1457602 None:intergenic
TTTGCTGATGCTTGCCTCAA+AGG 0.464611 4_1:-1454933 Msa0528610:CDS
CCCACCGGCGGCACCGAGAA+TGG 0.465990 4_1:+1457737 None:intergenic
AGCAATATCATAAAGAGAAA+GGG 0.469702 4_1:+1457665 None:intergenic
AATAGAGAGAGAGGGAGAGA+GGG 0.470931 4_1:+1457884 None:intergenic
TACAACTCTTGATGTAGTTA+GGG 0.471552 4_1:-1455720 Msa0528610:CDS
TGCTGCGGGACACGGCTGAC+TGG 0.474178 4_1:+1457808 None:intergenic
CTTGAAAACCTCAGCAGCAA+TGG 0.481837 4_1:+1455781 None:intergenic
CTTGCGTTCAGGAACCGGTT+CGG 0.485970 4_1:+1457764 None:intergenic
GTGGCCATTCTCGGTGCCGC+CGG 0.486479 4_1:-1457741 Msa0528610:CDS
AATGACATCATCATCCAGAT+TGG 0.486665 4_1:+1455217 None:intergenic
TAGTGAAGGGCCATTATGAA+TGG 0.487719 4_1:+1454271 None:intergenic
AACAAAGCCACCACCTCTGC+CGG 0.490459 4_1:+1454397 None:intergenic
CTAACATCGGCAGCAACACC+AGG 0.490641 4_1:+1457636 None:intergenic
GGGTTCCGCAACTTTGTCAA+TGG 0.490990 4_1:-1455132 Msa0528610:CDS
GGAATTACCTGAGAAAATAG+TGG 0.493703 4_1:+1455349 None:intergenic
GAACTCCATTAAGACCTTTG+AGG 0.494787 4_1:+1454919 None:intergenic
GAGGTTGTGACTGCCAAGGC+TGG 0.496598 4_1:-1455158 Msa0528610:CDS
GTAGAGGAAATTCTGGGCCT+AGG 0.496739 4_1:-1454608 Msa0528610:CDS
GCGGGTTATGCTGCGGGACA+CGG 0.500052 4_1:+1457800 None:intergenic
CCATTCTCGGTGCCGCCGGT+GGG 0.500262 4_1:-1457737 Msa0528610:CDS
CCGTGGCTATGCCACCGAAC+CGG 0.500819 4_1:-1457778 Msa0528610:CDS
TTGGTTTAGATCTTGAAAAG+TGG 0.507338 4_1:-1454140 Msa0528610:three_prime_UTR
GTATGACATGTTCGATTACT+GGG 0.508568 4_1:+1454499 None:intergenic
AAAAGAATTGTATAAGATAG+GGG 0.509027 4_1:+1453996 None:intergenic
AAAATTATTAGGCTCAGGCT+AGG 0.511423 4_1:-1454113 Msa0528610:three_prime_UTR
ATGGGGACAGTTGAGTTCAC+AGG 0.511862 4_1:+1455800 None:intergenic
TGTGACTGCCAAGGCTGGAA+AGG 0.512626 4_1:-1455153 Msa0528610:CDS
GACGTTGTTATCATTCCTGC+CGG 0.514672 4_1:-1456465 Msa0528610:CDS
GTTTGTAATGTTGCCGGCAG+AGG 0.518493 4_1:-1454410 Msa0528610:three_prime_UTR
CCTGTTATAGGAGGCCATGC+AGG 0.522625 4_1:-1455385 Msa0528610:CDS
TGAGCTTGGAAAAGCTTTGG+AGG 0.525617 4_1:-1456493 Msa0528610:CDS
GCGGGACACGGCTGACTGGA+CGG 0.527623 4_1:+1457812 None:intergenic
CCACATCAACTCCAGATCTC+AGG 0.529181 4_1:-1457613 Msa0528610:intron
TCCAGGCTTTCTGGGCACGC+CGG 0.530779 4_1:+1456446 None:intergenic
GAATAGAGAGAGAGGGAGAG+AGG 0.534057 4_1:+1457883 None:intergenic
TTCGGTGGCATAGCCACGGC+GGG 0.536741 4_1:+1457782 None:intergenic
AATGAATGAACGCTTATGCT+TGG 0.538699 4_1:+1457916 None:intergenic
ACATGTCATACATTTCTGGC+AGG 0.543317 4_1:-1454487 Msa0528610:three_prime_UTR
GAGAAAGGGTTGAAACGAGA+GGG 0.543785 4_1:+1457679 None:intergenic
GCCACGGCGGGTTATGCTGC+GGG 0.544063 4_1:+1457794 None:intergenic
ATCACCTTGGAAGCAAAGAA+AGG 0.544474 4_1:+1454846 None:intergenic
AATGTTGCCGGCAGAGGTGG+TGG 0.545920 4_1:-1454404 Msa0528610:three_prime_UTR
AGCCACGGCGGGTTATGCTG+CGG 0.546095 4_1:+1457793 None:intergenic
AATGGTGTAGAGGAAATTCT+GGG 0.547032 4_1:-1454614 Msa0528610:CDS
TGTGGACATATGTGAACTGT+TGG 0.547069 4_1:-1454052 Msa0528610:three_prime_UTR
CTTAAGTCATCTATTGAGAA+GGG 0.549740 4_1:-1454536 Msa0528610:CDS
ATGACTTAAGTTCAGACTTG+AGG 0.553442 4_1:+1454549 None:intergenic
GTGACTGCCAAGGCTGGAAA+GGG 0.554401 4_1:-1455152 Msa0528610:CDS
GAGTATCGACGGCCTCATCA+TGG 0.558205 4_1:+1457839 None:intergenic
TCATATACTATGCAATTGAA+GGG 0.571026 4_1:-1454238 Msa0528610:three_prime_UTR
CTAACTGCGAGGACCCAAGA+TGG 0.573904 4_1:-1455188 Msa0528610:CDS
ATGAAACCATACATTAGTGA+AGG 0.574546 4_1:+1454257 None:intergenic
ACTTAAGTCATCTATTGAGA+AGG 0.574569 4_1:-1454537 Msa0528610:CDS
AAATTATTAGGCTCAGGCTA+GGG 0.575193 4_1:-1454112 Msa0528610:three_prime_UTR
TACGCAGGTGAAGATGAGCT+TGG 0.576220 4_1:-1456507 Msa0528610:CDS
CGACGAGAAGAGATTGTTTG+GGG 0.576854 4_1:-1455744 Msa0528610:CDS
TGTAATGTTGCCGGCAGAGG+TGG 0.579567 4_1:-1454407 Msa0528610:three_prime_UTR
GAGCTTCATGAGAAGAGAGA+GGG 0.580913 4_1:+1457704 None:intergenic
CTCAGGCTAGGGTGGATGAG+TGG 0.582680 4_1:-1454101 Msa0528610:three_prime_UTR
AGAGAAAGGGTTGAAACGAG+AGG 0.583003 4_1:+1457678 None:intergenic
TTATTAGGCTCAGGCTAGGG+TGG 0.584243 4_1:-1454109 Msa0528610:three_prime_UTR
GAAAGCTAATGTTCCAGTTG+CGG 0.585095 4_1:-1455678 Msa0528610:CDS
CCTGAGATCTGGAGTTGATG+TGG 0.592045 4_1:+1457613 None:intergenic
GTTGATGCTTGTAAGATGCT+CGG 0.592158 4_1:-1457982 Msa0528610:five_prime_UTR
TCTTCCGAGAATAGAGAGAG+AGG 0.594398 4_1:+1457875 None:intergenic
CCGGTTCGGTGGCATAGCCA+CGG 0.595900 4_1:+1457778 None:intergenic
GCGTTCAGGAACCGGTTCGG+TGG 0.596037 4_1:+1457767 None:intergenic
GTCCACGTGGATGAGTTATG+TGG 0.599348 4_1:-1454070 Msa0528610:three_prime_UTR
GAGGGGCTGACCGATCCCAC+CGG 0.599708 4_1:+1457722 None:intergenic
TGAAACCATACATTAGTGAA+GGG 0.599809 4_1:+1454258 None:intergenic
AAGAACAGTTTATTGCTGCA+GGG 0.600875 4_1:-1454327 Msa0528610:three_prime_UTR
TTCTCGAAGCATCCATGATG+AGG 0.602920 4_1:-1457851 Msa0528610:exon
AGCTTCATGAGAAGAGAGAG+GGG 0.608885 4_1:+1457705 None:intergenic
GAATTACCTGAGAAAATAGT+GGG 0.610521 4_1:+1455350 None:intergenic
GAGCTTGGAAAAGCTTTGGA+GGG 0.610948 4_1:-1456492 Msa0528610:CDS
GATTGGGAAGAATGGTGTAG+AGG 0.619575 4_1:-1454624 Msa0528610:CDS
GTCAATGTACCTGTTATAGG+AGG 0.620105 4_1:-1455394 Msa0528610:CDS
GGAGTTGATGTGGCTAACAT+CGG 0.621832 4_1:+1457623 None:intergenic
AAGGGCCATTATGAATGGAA+AGG 0.624743 4_1:+1454276 None:intergenic
GGAGAATAGTAACTCCTGCA+TGG 0.631392 4_1:+1455371 None:intergenic
CTTCCGAGAATAGAGAGAGA+GGG 0.632882 4_1:+1457876 None:intergenic
TGAGCTTCATGAGAAGAGAG+AGG 0.635248 4_1:+1457703 None:intergenic
ATGCAGGTAACTGGGTACGC+AGG 0.635967 4_1:-1456522 Msa0528610:intron
TGGGGACAGTTGAGTTCACA+GGG 0.637936 4_1:+1455801 None:intergenic
TTACGCCATTGACAAAGTTG+CGG 0.643353 4_1:+1455127 None:intergenic
CGAACCGGTTCCTGAACGCA+AGG 0.644125 4_1:-1457763 Msa0528610:CDS
TTATGCTTGGAGAGTGACGA+TGG 0.644637 4_1:+1457929 None:intergenic
TCCCGCAGCATAACCCGCCG+TGG 0.650564 4_1:-1457795 Msa0528610:CDS
GGATGTGCATCATAAATCAG+TGG 0.654082 4_1:+1454017 None:intergenic
AGGCTAGGGTGGATGAGTGG+AGG 0.654720 4_1:-1454098 Msa0528610:three_prime_UTR
CAAAATCTGAGAGAGAACCT+AGG 0.656711 4_1:+1454591 None:intergenic
AACAGAGGTTGTGACTGCCA+AGG 0.658548 4_1:-1455162 Msa0528610:CDS
GACCCAAGATGGAGGAACAG+AGG 0.666823 4_1:-1455177 Msa0528610:CDS
TCATCATCCAGATTGGCTTG+AGG 0.669069 4_1:+1455224 None:intergenic
ACCGGTTCCTGAACGCAAGG+TGG 0.673690 4_1:-1457760 Msa0528610:CDS
TAACATCGGCAGCAACACCA+GGG 0.676039 4_1:+1457637 None:intergenic
GTTCGGTGGCATAGCCACGG+CGG 0.681583 4_1:+1457781 None:intergenic
ACTGCGAGGACCCAAGATGG+AGG 0.683500 4_1:-1455185 Msa0528610:CDS
GGGCTGACCGATCCCACCGG+CGG 0.696199 4_1:+1457725 None:intergenic
TGGACGGATCTGAGTATCGA+CGG 0.700504 4_1:+1457828 None:intergenic
GCAGTACTTAGAAATAGCAG+TGG 0.701234 4_1:+1456371 None:intergenic
AGTGGAGGAAGTCGTCCACG+TGG 0.710170 4_1:-1454083 Msa0528610:three_prime_UTR
TCATTAAGGCTCTAACTGCG+AGG 0.713351 4_1:-1455199 Msa0528610:CDS
TGAAAACCTCAGCAGCAATG+GGG 0.722319 4_1:+1455783 None:intergenic
AACATCGGCAGCAACACCAG+GGG 0.724695 4_1:+1457638 None:intergenic
TGACATGTTCGATTACTGGG+AGG 0.743122 4_1:+1454502 None:intergenic
GTCCACATAACTCATCCACG+TGG 0.769200 4_1:+1454068 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATCTAAACAATTTTTTTTAA+GGG + chr4_1:1454917-1454936 None:intergenic 10.0%
!!! AATCTAAACAATTTTTTTTA+AGG + chr4_1:1454918-1454937 None:intergenic 10.0%
!!! AATCTAAACAATTTTTTTAT+AGG - chr4_1:1455076-1455095 Msa0528610:intron 10.0%
!!! ATCTAAACAATTTTTTTATA+GGG - chr4_1:1455077-1455096 Msa0528610:intron 10.0%
!!! ATCTAAACAATTTTTTTTAA+GGG + chr4_1:1454917-1454936 None:intergenic 10.0%
!!! AATCTAAACAATTTTTTTTA+AGG + chr4_1:1454918-1454937 None:intergenic 10.0%
!!! AATCTAAACAATTTTTTTAT+AGG - chr4_1:1455076-1455095 Msa0528610:intron 10.0%
!!! ATCTAAACAATTTTTTTATA+GGG - chr4_1:1455077-1455096 Msa0528610:intron 10.0%
!!! TTTGTTGTATTTTAATGTTA+TGG - chr4_1:1454830-1454849 Msa0528610:intron 15.0%
!!! TCTAAACAATTTTTTTTAAG+GGG + chr4_1:1454916-1454935 None:intergenic 15.0%
!! TTTGTAATTTGAAAGAATTT+CGG - chr4_1:1455014-1455033 Msa0528610:intron 15.0%
!!! TCTAAACAATTTTTTTATAG+GGG - chr4_1:1455078-1455097 Msa0528610:intron 15.0%
!! GCATGATTTATTTATTATTA+TGG - chr4_1:1455278-1455297 Msa0528610:intron 15.0%
!! AAACTAAACTAAAAAAATCA+CGG + chr4_1:1455437-1455456 None:intergenic 15.0%
!! CAGATTTAATTATTAAATCT+AGG + chr4_1:1457687-1457706 None:intergenic 15.0%
!! AAAGTGGTTATAAAATTATT+AGG - chr4_1:1457911-1457930 Msa0528610:five_prime_UTR 15.0%
!!! TTTGTTGTATTTTAATGTTA+TGG - chr4_1:1454830-1454849 Msa0528610:intron 15.0%
!!! TCTAAACAATTTTTTTTAAG+GGG + chr4_1:1454916-1454935 None:intergenic 15.0%
!! TTTGTAATTTGAAAGAATTT+CGG - chr4_1:1455014-1455033 Msa0528610:intron 15.0%
!!! TCTAAACAATTTTTTTATAG+GGG - chr4_1:1455078-1455097 Msa0528610:intron 15.0%
!! GCATGATTTATTTATTATTA+TGG - chr4_1:1455278-1455297 Msa0528610:intron 15.0%
!! AAACTAAACTAAAAAAATCA+CGG + chr4_1:1455437-1455456 None:intergenic 15.0%
!! CAGATTTAATTATTAAATCT+AGG + chr4_1:1457687-1457706 None:intergenic 15.0%
!! AAAGTGGTTATAAAATTATT+AGG - chr4_1:1457911-1457930 Msa0528610:five_prime_UTR 15.0%
!! ATGATGAATCTTAATTTCAA+AGG - chr4_1:1454490-1454509 Msa0528610:three_prime_UTR 20.0%
!! TTCAATGTAATCATATATGT+TGG + chr4_1:1454702-1454721 None:intergenic 20.0%
!! ATGTTATGGTAATTAACATT+TGG - chr4_1:1454844-1454863 Msa0528610:intron 20.0%
!! TGTTATGGTAATTAACATTT+GGG - chr4_1:1454845-1454864 Msa0528610:intron 20.0%
!!! ATTTAAAGATTCTTTGGTTT+TGG - chr4_1:1454948-1454967 Msa0528610:CDS 20.0%
!! GAAATTCTTTCAAATTACAA+AGG + chr4_1:1455015-1455034 None:intergenic 20.0%
!!! TTTTTTTTCCTTTCCAATTT+TGG - chr4_1:1455484-1455503 Msa0528610:intron 20.0%
!!! ATTTAAAACCAAAATTGGAA+AGG + chr4_1:1455495-1455514 None:intergenic 20.0%
!! CACTCAATTATTAGTATTAT+TGG + chr4_1:1455973-1455992 None:intergenic 20.0%
!! CAATAATACTAATAATTGAG+TGG - chr4_1:1455971-1455990 Msa0528610:intron 20.0%
!! ATATCATGCTTAAATATAGA+AGG + chr4_1:1456114-1456133 None:intergenic 20.0%
!! TTCTATATTTAAGCATGATA+TGG - chr4_1:1456113-1456132 Msa0528610:intron 20.0%
!!! GTTTCTATTTTTACTTCTAA+TGG - chr4_1:1457241-1457260 Msa0528610:intron 20.0%
!!! TTTTTACTTCTAATGGTTTA+AGG - chr4_1:1457248-1457267 Msa0528610:intron 20.0%
!! ACAACAAGTTAAAAGAAAAT+AGG + chr4_1:1457306-1457325 None:intergenic 20.0%
!! TGAATTTGCAAAATTTGATT+CGG + chr4_1:1457597-1457616 None:intergenic 20.0%
!!! AATTAAAACCAGTTTTAGAT+TGG - chr4_1:1457736-1457755 Msa0528610:CDS 20.0%
!! AGATCTAAACCAAAATAAAA+TGG + chr4_1:1457888-1457907 None:intergenic 20.0%
!! AAAAGAATTGTATAAGATAG+GGG + chr4_1:1458042-1458061 None:intergenic 20.0%
!! GAAAAGAATTGTATAAGATA+GGG + chr4_1:1458043-1458062 None:intergenic 20.0%
!! AGAAAAGAATTGTATAAGAT+AGG + chr4_1:1458044-1458063 None:intergenic 20.0%
!! ATGATGAATCTTAATTTCAA+AGG - chr4_1:1454490-1454509 Msa0528610:three_prime_UTR 20.0%
!! TTCAATGTAATCATATATGT+TGG + chr4_1:1454702-1454721 None:intergenic 20.0%
!! ATGTTATGGTAATTAACATT+TGG - chr4_1:1454844-1454863 Msa0528610:intron 20.0%
!! TGTTATGGTAATTAACATTT+GGG - chr4_1:1454845-1454864 Msa0528610:intron 20.0%
!!! ATTTAAAGATTCTTTGGTTT+TGG - chr4_1:1454948-1454967 Msa0528610:CDS 20.0%
!! GAAATTCTTTCAAATTACAA+AGG + chr4_1:1455015-1455034 None:intergenic 20.0%
!!! TTTTTTTTCCTTTCCAATTT+TGG - chr4_1:1455484-1455503 Msa0528610:intron 20.0%
!!! ATTTAAAACCAAAATTGGAA+AGG + chr4_1:1455495-1455514 None:intergenic 20.0%
!! CACTCAATTATTAGTATTAT+TGG + chr4_1:1455973-1455992 None:intergenic 20.0%
!! CAATAATACTAATAATTGAG+TGG - chr4_1:1455971-1455990 Msa0528610:intron 20.0%
!! ATATCATGCTTAAATATAGA+AGG + chr4_1:1456114-1456133 None:intergenic 20.0%
!! TTCTATATTTAAGCATGATA+TGG - chr4_1:1456113-1456132 Msa0528610:intron 20.0%
!!! GTTTCTATTTTTACTTCTAA+TGG - chr4_1:1457241-1457260 Msa0528610:intron 20.0%
!!! TTTTTACTTCTAATGGTTTA+AGG - chr4_1:1457248-1457267 Msa0528610:intron 20.0%
!! ACAACAAGTTAAAAGAAAAT+AGG + chr4_1:1457306-1457325 None:intergenic 20.0%
!! TGAATTTGCAAAATTTGATT+CGG + chr4_1:1457597-1457616 None:intergenic 20.0%
!!! AATTAAAACCAGTTTTAGAT+TGG - chr4_1:1457736-1457755 Msa0528610:CDS 20.0%
!! AGATCTAAACCAAAATAAAA+TGG + chr4_1:1457888-1457907 None:intergenic 20.0%
!! AAAAGAATTGTATAAGATAG+GGG + chr4_1:1458042-1458061 None:intergenic 20.0%
!! GAAAAGAATTGTATAAGATA+GGG + chr4_1:1458043-1458062 None:intergenic 20.0%
!! AGAAAAGAATTGTATAAGAT+AGG + chr4_1:1458044-1458063 None:intergenic 20.0%
! ACACAAAAAGAGGAAAATTT+GGG + chr4_1:1454021-1454040 None:intergenic 25.0%
!! TTACAAGCATCAACTATTTT+GGG + chr4_1:1454047-1454066 None:intergenic 25.0%
! AGCAATATCATAAAGAGAAA+GGG + chr4_1:1454373-1454392 None:intergenic 25.0%
! TTACAATTAACCAGTGAAAA+GGG + chr4_1:1454450-1454469 None:intergenic 25.0%
! TTTACAATTAACCAGTGAAA+AGG + chr4_1:1454451-1454470 None:intergenic 25.0%
! TAATAAAAATACGCATGAGA+TGG + chr4_1:1454603-1454622 None:intergenic 25.0%
!! TGATTTTCTTAAATGATCAG+CGG - chr4_1:1454727-1454746 Msa0528610:intron 25.0%
! AAACTTATGAAACATGGATA+TGG + chr4_1:1454792-1454811 None:intergenic 25.0%
! TCGTTAAAACTTATGAAACA+TGG + chr4_1:1454798-1454817 None:intergenic 25.0%
!!! ATTTTTTTTAAGGGGTACAT+CGG + chr4_1:1454908-1454927 None:intergenic 25.0%
! TTTGTAATTTGATGTCATGA+AGG + chr4_1:1454975-1454994 None:intergenic 25.0%
! AATTTGAAGATTCTTTGACA+GGG + chr4_1:1455046-1455065 None:intergenic 25.0%
! TAATTTGAAGATTCTTTGAC+AGG + chr4_1:1455047-1455066 None:intergenic 25.0%
!!! ATTTTTTTATAGGGGTAAAC+CGG - chr4_1:1455086-1455105 Msa0528610:intron 25.0%
!!! AGTGAACTGCAATTTTTTAT+AGG - chr4_1:1455169-1455188 Msa0528610:CDS 25.0%
!!! GTGAACTGCAATTTTTTATA+GGG - chr4_1:1455170-1455189 Msa0528610:CDS 25.0%
!!! TGAACTGCAATTTTTTATAG+GGG - chr4_1:1455171-1455190 Msa0528610:CDS 25.0%
!!! AATTTTTTATAGGGGTAAAC+CGG - chr4_1:1455179-1455198 Msa0528610:CDS 25.0%
!! CAATTCAGTGATGTTTATTT+TGG - chr4_1:1455759-1455778 Msa0528610:CDS 25.0%
! TGAGTGAATTTCATTACAAT+TGG - chr4_1:1455833-1455852 Msa0528610:intron 25.0%
!! TAATTTTCTTAAACTTACCC+TGG - chr4_1:1455868-1455887 Msa0528610:intron 25.0%
! ATAATTGAGTGGCATATTAT+TGG - chr4_1:1455982-1456001 Msa0528610:intron 25.0%
!! TTTACATCCATTAAAAGTGT+AGG - chr4_1:1456009-1456028 Msa0528610:intron 25.0%
!! AGGATTTGAGATTTATAAGT+TGG - chr4_1:1456029-1456048 Msa0528610:intron 25.0%
! ACTTCTTTAAATATGGAATC+AGG - chr4_1:1456189-1456208 Msa0528610:intron 25.0%
! AGTTATGTTCAACTTTCTTT+GGG + chr4_1:1456490-1456509 None:intergenic 25.0%
!! TTGTAATTGCATGAAGATTT+TGG - chr4_1:1456555-1456574 Msa0528610:intron 25.0%
! ATGTACAACTAATAGCAAAT+TGG + chr4_1:1456599-1456618 None:intergenic 25.0%
! ATACGAAAGAATAAAACAAC+TGG + chr4_1:1457359-1457378 None:intergenic 25.0%
!! AAACTGTTGAAATGTTTTAC+AGG - chr4_1:1457384-1457403 Msa0528610:intron 25.0%
!!! AAATTTGATTCGGTTCTAAA+TGG + chr4_1:1457587-1457606 None:intergenic 25.0%
!!! TTTGTTGTTTTATTTAGAGC+AGG - chr4_1:1457655-1457674 Msa0528610:CDS 25.0%
! TTCATATACTATGCAATTGA+AGG - chr4_1:1457796-1457815 Msa0528610:CDS 25.0%
! TCATATACTATGCAATTGAA+GGG - chr4_1:1457797-1457816 Msa0528610:CDS 25.0%
!!! CATATCGATCCATTTTATTT+TGG - chr4_1:1457876-1457895 Msa0528610:five_prime_UTR 25.0%
! GTTATAAAATTATTAGGCTC+AGG - chr4_1:1457917-1457936 Msa0528610:five_prime_UTR 25.0%
! ACACAAAAAGAGGAAAATTT+GGG + chr4_1:1454021-1454040 None:intergenic 25.0%
!! TTACAAGCATCAACTATTTT+GGG + chr4_1:1454047-1454066 None:intergenic 25.0%
! AGCAATATCATAAAGAGAAA+GGG + chr4_1:1454373-1454392 None:intergenic 25.0%
! TTACAATTAACCAGTGAAAA+GGG + chr4_1:1454450-1454469 None:intergenic 25.0%
! TTTACAATTAACCAGTGAAA+AGG + chr4_1:1454451-1454470 None:intergenic 25.0%
! TAATAAAAATACGCATGAGA+TGG + chr4_1:1454603-1454622 None:intergenic 25.0%
!! TGATTTTCTTAAATGATCAG+CGG - chr4_1:1454727-1454746 Msa0528610:intron 25.0%
! AAACTTATGAAACATGGATA+TGG + chr4_1:1454792-1454811 None:intergenic 25.0%
! TCGTTAAAACTTATGAAACA+TGG + chr4_1:1454798-1454817 None:intergenic 25.0%
!!! ATTTTTTTTAAGGGGTACAT+CGG + chr4_1:1454908-1454927 None:intergenic 25.0%
! TTTGTAATTTGATGTCATGA+AGG + chr4_1:1454975-1454994 None:intergenic 25.0%
! AATTTGAAGATTCTTTGACA+GGG + chr4_1:1455046-1455065 None:intergenic 25.0%
! TAATTTGAAGATTCTTTGAC+AGG + chr4_1:1455047-1455066 None:intergenic 25.0%
!!! ATTTTTTTATAGGGGTAAAC+CGG - chr4_1:1455086-1455105 Msa0528610:intron 25.0%
!!! AGTGAACTGCAATTTTTTAT+AGG - chr4_1:1455169-1455188 Msa0528610:CDS 25.0%
!!! GTGAACTGCAATTTTTTATA+GGG - chr4_1:1455170-1455189 Msa0528610:CDS 25.0%
!!! TGAACTGCAATTTTTTATAG+GGG - chr4_1:1455171-1455190 Msa0528610:CDS 25.0%
!!! AATTTTTTATAGGGGTAAAC+CGG - chr4_1:1455179-1455198 Msa0528610:CDS 25.0%
!! CAATTCAGTGATGTTTATTT+TGG - chr4_1:1455759-1455778 Msa0528610:CDS 25.0%
! TGAGTGAATTTCATTACAAT+TGG - chr4_1:1455833-1455852 Msa0528610:intron 25.0%
!! TAATTTTCTTAAACTTACCC+TGG - chr4_1:1455868-1455887 Msa0528610:intron 25.0%
! ATAATTGAGTGGCATATTAT+TGG - chr4_1:1455982-1456001 Msa0528610:intron 25.0%
!! TTTACATCCATTAAAAGTGT+AGG - chr4_1:1456009-1456028 Msa0528610:intron 25.0%
!! AGGATTTGAGATTTATAAGT+TGG - chr4_1:1456029-1456048 Msa0528610:intron 25.0%
! ACTTCTTTAAATATGGAATC+AGG - chr4_1:1456189-1456208 Msa0528610:intron 25.0%
! AGTTATGTTCAACTTTCTTT+GGG + chr4_1:1456490-1456509 None:intergenic 25.0%
!! TTGTAATTGCATGAAGATTT+TGG - chr4_1:1456555-1456574 Msa0528610:intron 25.0%
! ATGTACAACTAATAGCAAAT+TGG + chr4_1:1456599-1456618 None:intergenic 25.0%
! ATACGAAAGAATAAAACAAC+TGG + chr4_1:1457359-1457378 None:intergenic 25.0%
!! AAACTGTTGAAATGTTTTAC+AGG - chr4_1:1457384-1457403 Msa0528610:intron 25.0%
!!! AAATTTGATTCGGTTCTAAA+TGG + chr4_1:1457587-1457606 None:intergenic 25.0%
!!! TTTGTTGTTTTATTTAGAGC+AGG - chr4_1:1457655-1457674 Msa0528610:CDS 25.0%
! TTCATATACTATGCAATTGA+AGG - chr4_1:1457796-1457815 Msa0528610:CDS 25.0%
! TCATATACTATGCAATTGAA+GGG - chr4_1:1457797-1457816 Msa0528610:CDS 25.0%
!!! CATATCGATCCATTTTATTT+TGG - chr4_1:1457876-1457895 Msa0528610:five_prime_UTR 25.0%
! GTTATAAAATTATTAGGCTC+AGG - chr4_1:1457917-1457936 Msa0528610:five_prime_UTR 25.0%
CACAAAAAGAGGAAAATTTG+GGG + chr4_1:1454020-1454039 None:intergenic 30.0%
CACACAAAAAGAGGAAAATT+TGG + chr4_1:1454022-1454041 None:intergenic 30.0%
! CAAATTTTCCTCTTTTTGTG+TGG - chr4_1:1454020-1454039 Msa0528610:three_prime_UTR 30.0%
! CTTACAAGCATCAACTATTT+TGG + chr4_1:1454048-1454067 None:intergenic 30.0%
AATCTCTACTCGCAATAAAT+TGG - chr4_1:1454081-1454100 Msa0528610:three_prime_UTR 30.0%
CAGCAATATCATAAAGAGAA+AGG + chr4_1:1454374-1454393 None:intergenic 30.0%
CTTTCTCTTTATGATATTGC+TGG - chr4_1:1454372-1454391 Msa0528610:three_prime_UTR 30.0%
!! ACTTTACTTGTGCTGTTTAT+TGG - chr4_1:1454518-1454537 Msa0528610:CDS 30.0%
!! CTTTACTTGTGCTGTTTATT+GGG - chr4_1:1454519-1454538 Msa0528610:CDS 30.0%
AGAATCTTTAAATCACAGGT+TGG + chr4_1:1454941-1454960 None:intergenic 30.0%
CCAAAGAATCTTTAAATCAC+AGG + chr4_1:1454945-1454964 None:intergenic 30.0%
CCTGTGATTTAAAGATTCTT+TGG - chr4_1:1454942-1454961 Msa0528610:CDS 30.0%
ATTTGAAGATTCTTTGACAG+GGG + chr4_1:1455045-1455064 None:intergenic 30.0%
GAATCTTCAAATTACAGTGT+TGG - chr4_1:1455053-1455072 Msa0528610:intron 30.0%
! CATGTAATATTGGTGATTTC+CGG + chr4_1:1455108-1455127 None:intergenic 30.0%
GGAAATCACCAATATTACAT+GGG - chr4_1:1455107-1455126 Msa0528610:intron 30.0%
!!! TTAACCCTTAACCTTTTTTG+TGG - chr4_1:1455143-1455162 Msa0528610:CDS 30.0%
!!! TAACCCTTAACCTTTTTTGT+GGG - chr4_1:1455144-1455163 Msa0528610:CDS 30.0%
! CATGTAATATTGGTGATTTC+CGG + chr4_1:1455108-1455127 None:intergenic 30.0%
GGAAATCACCAATATTACAT+GGG - chr4_1:1455107-1455126 Msa0528610:intron 30.0%
! TTAACCCTTAACCTTATTTG+TGG - chr4_1:1455236-1455255 Msa0528610:intron 30.0%
! TAACCCTTAACCTTATTTGT+GGG - chr4_1:1455237-1455256 Msa0528610:intron 30.0%
!!! CATTTGATTTTAGAACACGA+AGG - chr4_1:1455304-1455323 Msa0528610:intron 30.0%
! CCTGCATTTAAAACCAAAAT+TGG + chr4_1:1455500-1455519 None:intergenic 30.0%
!!! CCAATTTTGGTTTTAAATGC+AGG - chr4_1:1455497-1455516 Msa0528610:intron 30.0%
! CTCAAATCCTACACTTTTAA+TGG + chr4_1:1456019-1456038 None:intergenic 30.0%
GCTGAGTACTTCTTTAAATA+TGG - chr4_1:1456182-1456201 Msa0528610:intron 30.0%
TTACAACTCTTGATGTAGTT+AGG - chr4_1:1456314-1456333 Msa0528610:intron 30.0%
TACAACTCTTGATGTAGTTA+GGG - chr4_1:1456315-1456334 Msa0528610:intron 30.0%
AAACATGAGGATTTGAGTAT+TGG - chr4_1:1456442-1456461 Msa0528610:CDS 30.0%
CAGTTATGTTCAACTTTCTT+TGG + chr4_1:1456491-1456510 None:intergenic 30.0%
!! AACATTTGATTTTTCTGCAG+AGG - chr4_1:1456619-1456638 Msa0528610:intron 30.0%
GAATTACCTGAGAAAATAGT+GGG + chr4_1:1456688-1456707 None:intergenic 30.0%
AAAATGCAAGTTAAAGAGCA+GGG + chr4_1:1456710-1456729 None:intergenic 30.0%
! CGTACTTCTAACATGTATTT+TGG - chr4_1:1456730-1456749 Msa0528610:intron 30.0%
TCTTAACTGTTCTCTTGTAT+AGG - chr4_1:1456783-1456802 Msa0528610:intron 30.0%
ACTACAAGAATTATGATTCC+TGG - chr4_1:1457015-1457034 Msa0528610:intron 30.0%
CTACAAGAATTATGATTCCT+GGG - chr4_1:1457016-1457035 Msa0528610:intron 30.0%
!! ACTTGTTGTGTTCATAGAAA+CGG - chr4_1:1457317-1457336 Msa0528610:intron 30.0%
ACTTAAGTCATCTATTGAGA+AGG - chr4_1:1457498-1457517 Msa0528610:intron 30.0%
CTTAAGTCATCTATTGAGAA+GGG - chr4_1:1457499-1457518 Msa0528610:intron 30.0%
ACAATTGTTTGTAATGTTGC+CGG - chr4_1:1457619-1457638 Msa0528610:CDS 30.0%
TGAAACCATACATTAGTGAA+GGG + chr4_1:1457780-1457799 None:intergenic 30.0%
ATGAAACCATACATTAGTGA+AGG + chr4_1:1457781-1457800 None:intergenic 30.0%
TTGGTTTAGATCTTGAAAAG+TGG - chr4_1:1457895-1457914 Msa0528610:five_prime_UTR 30.0%
CACAAAAAGAGGAAAATTTG+GGG + chr4_1:1454020-1454039 None:intergenic 30.0%
CACACAAAAAGAGGAAAATT+TGG + chr4_1:1454022-1454041 None:intergenic 30.0%
! CAAATTTTCCTCTTTTTGTG+TGG - chr4_1:1454020-1454039 Msa0528610:three_prime_UTR 30.0%
! CTTACAAGCATCAACTATTT+TGG + chr4_1:1454048-1454067 None:intergenic 30.0%
AATCTCTACTCGCAATAAAT+TGG - chr4_1:1454081-1454100 Msa0528610:three_prime_UTR 30.0%
CAGCAATATCATAAAGAGAA+AGG + chr4_1:1454374-1454393 None:intergenic 30.0%
CTTTCTCTTTATGATATTGC+TGG - chr4_1:1454372-1454391 Msa0528610:three_prime_UTR 30.0%
!! ACTTTACTTGTGCTGTTTAT+TGG - chr4_1:1454518-1454537 Msa0528610:CDS 30.0%
!! CTTTACTTGTGCTGTTTATT+GGG - chr4_1:1454519-1454538 Msa0528610:CDS 30.0%
AGAATCTTTAAATCACAGGT+TGG + chr4_1:1454941-1454960 None:intergenic 30.0%
CCAAAGAATCTTTAAATCAC+AGG + chr4_1:1454945-1454964 None:intergenic 30.0%
CCTGTGATTTAAAGATTCTT+TGG - chr4_1:1454942-1454961 Msa0528610:CDS 30.0%
ATTTGAAGATTCTTTGACAG+GGG + chr4_1:1455045-1455064 None:intergenic 30.0%
GAATCTTCAAATTACAGTGT+TGG - chr4_1:1455053-1455072 Msa0528610:intron 30.0%
! CATGTAATATTGGTGATTTC+CGG + chr4_1:1455108-1455127 None:intergenic 30.0%
GGAAATCACCAATATTACAT+GGG - chr4_1:1455107-1455126 Msa0528610:intron 30.0%
!!! TTAACCCTTAACCTTTTTTG+TGG - chr4_1:1455143-1455162 Msa0528610:CDS 30.0%
!!! TAACCCTTAACCTTTTTTGT+GGG - chr4_1:1455144-1455163 Msa0528610:CDS 30.0%
! CATGTAATATTGGTGATTTC+CGG + chr4_1:1455108-1455127 None:intergenic 30.0%
GGAAATCACCAATATTACAT+GGG - chr4_1:1455107-1455126 Msa0528610:intron 30.0%
! TTAACCCTTAACCTTATTTG+TGG - chr4_1:1455236-1455255 Msa0528610:intron 30.0%
! TAACCCTTAACCTTATTTGT+GGG - chr4_1:1455237-1455256 Msa0528610:intron 30.0%
!!! CATTTGATTTTAGAACACGA+AGG - chr4_1:1455304-1455323 Msa0528610:intron 30.0%
! CCTGCATTTAAAACCAAAAT+TGG + chr4_1:1455500-1455519 None:intergenic 30.0%
!!! CCAATTTTGGTTTTAAATGC+AGG - chr4_1:1455497-1455516 Msa0528610:intron 30.0%
! CTCAAATCCTACACTTTTAA+TGG + chr4_1:1456019-1456038 None:intergenic 30.0%
GCTGAGTACTTCTTTAAATA+TGG - chr4_1:1456182-1456201 Msa0528610:intron 30.0%
TTACAACTCTTGATGTAGTT+AGG - chr4_1:1456314-1456333 Msa0528610:intron 30.0%
TACAACTCTTGATGTAGTTA+GGG - chr4_1:1456315-1456334 Msa0528610:intron 30.0%
AAACATGAGGATTTGAGTAT+TGG - chr4_1:1456442-1456461 Msa0528610:CDS 30.0%
CAGTTATGTTCAACTTTCTT+TGG + chr4_1:1456491-1456510 None:intergenic 30.0%
!! AACATTTGATTTTTCTGCAG+AGG - chr4_1:1456619-1456638 Msa0528610:intron 30.0%
GAATTACCTGAGAAAATAGT+GGG + chr4_1:1456688-1456707 None:intergenic 30.0%
AAAATGCAAGTTAAAGAGCA+GGG + chr4_1:1456710-1456729 None:intergenic 30.0%
! CGTACTTCTAACATGTATTT+TGG - chr4_1:1456730-1456749 Msa0528610:intron 30.0%
TCTTAACTGTTCTCTTGTAT+AGG - chr4_1:1456783-1456802 Msa0528610:intron 30.0%
ACTACAAGAATTATGATTCC+TGG - chr4_1:1457015-1457034 Msa0528610:intron 30.0%
CTACAAGAATTATGATTCCT+GGG - chr4_1:1457016-1457035 Msa0528610:intron 30.0%
!! ACTTGTTGTGTTCATAGAAA+CGG - chr4_1:1457317-1457336 Msa0528610:intron 30.0%
ACTTAAGTCATCTATTGAGA+AGG - chr4_1:1457498-1457517 Msa0528610:intron 30.0%
CTTAAGTCATCTATTGAGAA+GGG - chr4_1:1457499-1457518 Msa0528610:intron 30.0%
ACAATTGTTTGTAATGTTGC+CGG - chr4_1:1457619-1457638 Msa0528610:CDS 30.0%
TGAAACCATACATTAGTGAA+GGG + chr4_1:1457780-1457799 None:intergenic 30.0%
ATGAAACCATACATTAGTGA+AGG + chr4_1:1457781-1457800 None:intergenic 30.0%
TTGGTTTAGATCTTGAAAAG+TGG - chr4_1:1457895-1457914 Msa0528610:five_prime_UTR 30.0%
AATGAATGAACGCTTATGCT+TGG + chr4_1:1454122-1454141 None:intergenic 35.0%
TGTGAGAGATCGGAATTAAT+CGG - chr4_1:1454549-1454568 Msa0528610:CDS 35.0%
GAAATCGCTCATATTATAGG+GGG + chr4_1:1454886-1454905 None:intergenic 35.0%
GGAAATCGCTCATATTATAG+GGG + chr4_1:1454887-1454906 None:intergenic 35.0%
CGGAAATCGCTCATATTATA+GGG + chr4_1:1454888-1454907 None:intergenic 35.0%
TCGGAAATCGCTCATATTAT+AGG + chr4_1:1454889-1454908 None:intergenic 35.0%
TTTGAAGATTCTTTGACAGG+GGG + chr4_1:1455044-1455063 None:intergenic 35.0%
CGGAAATCACCAATATTACA+TGG - chr4_1:1455106-1455125 Msa0528610:intron 35.0%
AATCACCAATATTACATGGG+AGG - chr4_1:1455110-1455129 Msa0528610:intron 35.0%
GTTTACCTCCCATGTAATAT+TGG + chr4_1:1455118-1455137 None:intergenic 35.0%
!!! AACCCTTAACCTTTTTTGTG+GGG - chr4_1:1455145-1455164 Msa0528610:CDS 35.0%
CGGAAATCACCAATATTACA+TGG - chr4_1:1455106-1455125 Msa0528610:intron 35.0%
AATCACCAATATTACATGGG+AGG - chr4_1:1455110-1455129 Msa0528610:intron 35.0%
GTTTACCTCCCATGTAATAT+TGG + chr4_1:1455118-1455137 None:intergenic 35.0%
! AACCCTTAACCTTATTTGTG+GGG - chr4_1:1455238-1455257 Msa0528610:intron 35.0%
!!! ACACGAAGGTACTCTTTTAT+TGG - chr4_1:1455318-1455337 Msa0528610:intron 35.0%
!!! TGGTTTTAAATGCAGGTAAC+TGG - chr4_1:1455504-1455523 Msa0528610:intron 35.0%
!!! GGTTTTAAATGCAGGTAACT+GGG - chr4_1:1455505-1455524 Msa0528610:intron 35.0%
! GATCTTTTCAACATTAACGC+TGG - chr4_1:1455624-1455643 Msa0528610:intron 35.0%
! TGTACTAGCTTATGCAATGA+AGG - chr4_1:1455807-1455826 Msa0528610:CDS 35.0%
TTTCCTTAAGACGAAACATG+AGG - chr4_1:1456429-1456448 Msa0528610:CDS 35.0%
AATCCTCATGTTTCGTCTTA+AGG + chr4_1:1456435-1456454 None:intergenic 35.0%
!!! TGTTTTTTCTCGAGCAAGAA+CGG - chr4_1:1456514-1456533 Msa0528610:CDS 35.0%
! TATTCTCCCACTATTTTCTC+AGG - chr4_1:1456679-1456698 Msa0528610:intron 35.0%
GGAATTACCTGAGAAAATAG+TGG + chr4_1:1456689-1456708 None:intergenic 35.0%
GAAAATGCAAGTTAAAGAGC+AGG + chr4_1:1456711-1456730 None:intergenic 35.0%
AATGACATCATCATCCAGAT+TGG + chr4_1:1456821-1456840 None:intergenic 35.0%
! TCTGGATGATGATGTCATTA+AGG - chr4_1:1456822-1456841 Msa0528610:intron 35.0%
TGATTTAGCCATGTTGATAC+TGG - chr4_1:1456935-1456954 Msa0528610:intron 35.0%
!! GTTCATTCTCTTGTTGTTTG+TGG - chr4_1:1457270-1457289 Msa0528610:intron 35.0%
!! TTGTTGTTTGTGGATGCATA+GGG - chr4_1:1457280-1457299 Msa0528610:intron 35.0%
CGAAAGAATAAAACAACTGG+TGG + chr4_1:1457356-1457375 None:intergenic 35.0%
! GTTGAAATGTTTTACAGGTG+AGG - chr4_1:1457389-1457408 Msa0528610:intron 35.0%
! AATGTTTTACAGGTGAGGAT+TGG - chr4_1:1457394-1457413 Msa0528610:intron 35.0%
! ATGTTTTACAGGTGAGGATT+GGG - chr4_1:1457395-1457414 Msa0528610:intron 35.0%
AATGGTGTAGAGGAAATTCT+GGG - chr4_1:1457421-1457440 Msa0528610:intron 35.0%
!! CTCTCAGATTTTGAGAAACA+AGG - chr4_1:1457454-1457473 Msa0528610:intron 35.0%
ATGACTTAAGTTCAGACTTG+AGG + chr4_1:1457489-1457508 None:intergenic 35.0%
GTATGACATGTTCGATTACT+GGG + chr4_1:1457539-1457558 None:intergenic 35.0%
TGTATGACATGTTCGATTAC+TGG + chr4_1:1457540-1457559 None:intergenic 35.0%
TCGAACATGTCATACATTTC+TGG - chr4_1:1457544-1457563 Msa0528610:intron 35.0%
AAGAACAGTTTATTGCTGCA+GGG - chr4_1:1457708-1457727 Msa0528610:CDS 35.0%
!! ATTGGCCTTTCCATTCATAA+TGG - chr4_1:1457754-1457773 Msa0528610:CDS 35.0%
AAAATTATTAGGCTCAGGCT+AGG - chr4_1:1457922-1457941 Msa0528610:five_prime_UTR 35.0%
AAATTATTAGGCTCAGGCTA+GGG - chr4_1:1457923-1457942 Msa0528610:five_prime_UTR 35.0%
AATGAATGAACGCTTATGCT+TGG + chr4_1:1454122-1454141 None:intergenic 35.0%
TGTGAGAGATCGGAATTAAT+CGG - chr4_1:1454549-1454568 Msa0528610:CDS 35.0%
GAAATCGCTCATATTATAGG+GGG + chr4_1:1454886-1454905 None:intergenic 35.0%
GGAAATCGCTCATATTATAG+GGG + chr4_1:1454887-1454906 None:intergenic 35.0%
CGGAAATCGCTCATATTATA+GGG + chr4_1:1454888-1454907 None:intergenic 35.0%
TCGGAAATCGCTCATATTAT+AGG + chr4_1:1454889-1454908 None:intergenic 35.0%
TTTGAAGATTCTTTGACAGG+GGG + chr4_1:1455044-1455063 None:intergenic 35.0%
CGGAAATCACCAATATTACA+TGG - chr4_1:1455106-1455125 Msa0528610:intron 35.0%
AATCACCAATATTACATGGG+AGG - chr4_1:1455110-1455129 Msa0528610:intron 35.0%
GTTTACCTCCCATGTAATAT+TGG + chr4_1:1455118-1455137 None:intergenic 35.0%
!!! AACCCTTAACCTTTTTTGTG+GGG - chr4_1:1455145-1455164 Msa0528610:CDS 35.0%
CGGAAATCACCAATATTACA+TGG - chr4_1:1455106-1455125 Msa0528610:intron 35.0%
AATCACCAATATTACATGGG+AGG - chr4_1:1455110-1455129 Msa0528610:intron 35.0%
GTTTACCTCCCATGTAATAT+TGG + chr4_1:1455118-1455137 None:intergenic 35.0%
! AACCCTTAACCTTATTTGTG+GGG - chr4_1:1455238-1455257 Msa0528610:intron 35.0%
!!! ACACGAAGGTACTCTTTTAT+TGG - chr4_1:1455318-1455337 Msa0528610:intron 35.0%
!!! TGGTTTTAAATGCAGGTAAC+TGG - chr4_1:1455504-1455523 Msa0528610:intron 35.0%
!!! GGTTTTAAATGCAGGTAACT+GGG - chr4_1:1455505-1455524 Msa0528610:intron 35.0%
! GATCTTTTCAACATTAACGC+TGG - chr4_1:1455624-1455643 Msa0528610:intron 35.0%
! TGTACTAGCTTATGCAATGA+AGG - chr4_1:1455807-1455826 Msa0528610:CDS 35.0%
TTTCCTTAAGACGAAACATG+AGG - chr4_1:1456429-1456448 Msa0528610:CDS 35.0%
AATCCTCATGTTTCGTCTTA+AGG + chr4_1:1456435-1456454 None:intergenic 35.0%
!!! TGTTTTTTCTCGAGCAAGAA+CGG - chr4_1:1456514-1456533 Msa0528610:CDS 35.0%
! TATTCTCCCACTATTTTCTC+AGG - chr4_1:1456679-1456698 Msa0528610:intron 35.0%
GGAATTACCTGAGAAAATAG+TGG + chr4_1:1456689-1456708 None:intergenic 35.0%
GAAAATGCAAGTTAAAGAGC+AGG + chr4_1:1456711-1456730 None:intergenic 35.0%
AATGACATCATCATCCAGAT+TGG + chr4_1:1456821-1456840 None:intergenic 35.0%
! TCTGGATGATGATGTCATTA+AGG - chr4_1:1456822-1456841 Msa0528610:intron 35.0%
TGATTTAGCCATGTTGATAC+TGG - chr4_1:1456935-1456954 Msa0528610:intron 35.0%
!! GTTCATTCTCTTGTTGTTTG+TGG - chr4_1:1457270-1457289 Msa0528610:intron 35.0%
!! TTGTTGTTTGTGGATGCATA+GGG - chr4_1:1457280-1457299 Msa0528610:intron 35.0%
CGAAAGAATAAAACAACTGG+TGG + chr4_1:1457356-1457375 None:intergenic 35.0%
! GTTGAAATGTTTTACAGGTG+AGG - chr4_1:1457389-1457408 Msa0528610:intron 35.0%
! AATGTTTTACAGGTGAGGAT+TGG - chr4_1:1457394-1457413 Msa0528610:intron 35.0%
! ATGTTTTACAGGTGAGGATT+GGG - chr4_1:1457395-1457414 Msa0528610:intron 35.0%
AATGGTGTAGAGGAAATTCT+GGG - chr4_1:1457421-1457440 Msa0528610:intron 35.0%
!! CTCTCAGATTTTGAGAAACA+AGG - chr4_1:1457454-1457473 Msa0528610:intron 35.0%
ATGACTTAAGTTCAGACTTG+AGG + chr4_1:1457489-1457508 None:intergenic 35.0%
GTATGACATGTTCGATTACT+GGG + chr4_1:1457539-1457558 None:intergenic 35.0%
TGTATGACATGTTCGATTAC+TGG + chr4_1:1457540-1457559 None:intergenic 35.0%
TCGAACATGTCATACATTTC+TGG - chr4_1:1457544-1457563 Msa0528610:intron 35.0%
AAGAACAGTTTATTGCTGCA+GGG - chr4_1:1457708-1457727 Msa0528610:CDS 35.0%
!! ATTGGCCTTTCCATTCATAA+TGG - chr4_1:1457754-1457773 Msa0528610:CDS 35.0%
AAAATTATTAGGCTCAGGCT+AGG - chr4_1:1457922-1457941 Msa0528610:five_prime_UTR 35.0%
AAATTATTAGGCTCAGGCTA+GGG - chr4_1:1457923-1457942 Msa0528610:five_prime_UTR 35.0%
!! TTTTGGGTCCACACAAAAAG+AGG + chr4_1:1454031-1454050 None:intergenic 40.0%
GTTGATGCTTGTAAGATGCT+CGG - chr4_1:1454053-1454072 Msa0528610:three_prime_UTR 40.0%
GGGTTATTCTTGTGAGAGAT+CGG - chr4_1:1454539-1454558 Msa0528610:CDS 40.0%
TCTTAAATGATCAGCGGTGT+CGG - chr4_1:1454733-1454752 Msa0528610:intron 40.0%
!!! ACCCTTAACCTTTTTTGTGG+GGG - chr4_1:1455146-1455165 Msa0528610:CDS 40.0%
TCCCCCACAAAAAAGGTTAA+GGG + chr4_1:1455150-1455169 None:intergenic 40.0%
! ACCCTTAACCTTATTTGTGG+GGG - chr4_1:1455239-1455258 Msa0528610:intron 40.0%
TCCCCCACAAATAAGGTTAA+GGG + chr4_1:1455243-1455262 None:intergenic 40.0%
AGTTTACTCCCCCACAAATA+AGG + chr4_1:1455250-1455269 None:intergenic 40.0%
AAAATCACGGCATTGCTGAA+GGG + chr4_1:1455424-1455443 None:intergenic 40.0%
AAAAATCACGGCATTGCTGA+AGG + chr4_1:1455425-1455444 None:intergenic 40.0%
! TGTTGTTGAGCTGTTGATTG+AGG - chr4_1:1455459-1455478 Msa0528610:intron 40.0%
AGATGAGCTTGGAAAAGCTT+TGG - chr4_1:1455539-1455558 Msa0528610:intron 40.0%
GCAGTACTTAGAAATAGCAG+TGG + chr4_1:1455667-1455686 None:intergenic 40.0%
ACGAAAACAGAGACTCACAT+GGG + chr4_1:1455691-1455710 None:intergenic 40.0%
AACGAAAACAGAGACTCACA+TGG + chr4_1:1455692-1455711 None:intergenic 40.0%
CCAGTCTAAGAGTAAATCCA+GGG + chr4_1:1455888-1455907 None:intergenic 40.0%
ACCAGTCTAAGAGTAAATCC+AGG + chr4_1:1455889-1455908 None:intergenic 40.0%
TTGAAAACCTCAGCAGCAAT+GGG + chr4_1:1456256-1456275 None:intergenic 40.0%
TACGACGAGAAGAGATTGTT+TGG - chr4_1:1456289-1456308 Msa0528610:intron 40.0%
ACGACGAGAAGAGATTGTTT+GGG - chr4_1:1456290-1456309 Msa0528610:intron 40.0%
AGGGCAAAAACTTTCTATGC+TGG - chr4_1:1456334-1456353 Msa0528610:intron 40.0%
GGGCAAAAACTTTCTATGCT+GGG - chr4_1:1456335-1456354 Msa0528610:intron 40.0%
GAAAGCTAATGTTCCAGTTG+CGG - chr4_1:1456357-1456376 Msa0528610:intron 40.0%
AAAGCTAATGTTCCAGTTGC+GGG - chr4_1:1456358-1456377 Msa0528610:intron 40.0%
!!! GTTTTTTCTCGAGCAAGAAC+GGG - chr4_1:1456515-1456534 Msa0528610:CDS 40.0%
!!! TTTTTTCTCGAGCAAGAACG+GGG - chr4_1:1456516-1456535 Msa0528610:CDS 40.0%
GAGGTCAATGTACCTGTTAT+AGG - chr4_1:1456638-1456657 Msa0528610:intron 40.0%
GTCAATGTACCTGTTATAGG+AGG - chr4_1:1456641-1456660 Msa0528610:intron 40.0%
TTACGCCATTGACAAAGTTG+CGG + chr4_1:1456911-1456930 None:intergenic 40.0%
CATGTTTCTTGCAGTTATGC+TGG - chr4_1:1457072-1457091 Msa0528610:intron 40.0%
GAACTCCATTAAGACCTTTG+AGG + chr4_1:1457119-1457138 None:intergenic 40.0%
AGGAAGTTCAGCAATGAGAT+TGG + chr4_1:1457172-1457191 None:intergenic 40.0%
ACTTCCTTTCTTTGCTTCCA+AGG - chr4_1:1457185-1457204 Msa0528610:intron 40.0%
ATCACCTTGGAAGCAAAGAA+AGG + chr4_1:1457192-1457211 None:intergenic 40.0%
!! CTTGTTGTTTGTGGATGCAT+AGG - chr4_1:1457279-1457298 Msa0528610:intron 40.0%
GAATGGTGTAGAGGAAATTC+TGG - chr4_1:1457420-1457439 Msa0528610:intron 40.0%
CAAAATCTGAGAGAGAACCT+AGG + chr4_1:1457447-1457466 None:intergenic 40.0%
! GTTCAGACTTGAGGTTTTCA+AGG + chr4_1:1457480-1457499 None:intergenic 40.0%
!! ACATGTCATACATTTCTGGC+AGG - chr4_1:1457548-1457567 Msa0528610:intron 40.0%
!! ATACATTTCTGGCAGGTTAC+TGG - chr4_1:1457555-1457574 Msa0528610:intron 40.0%
CAAGAACAGTTTATTGCTGC+AGG - chr4_1:1457707-1457726 Msa0528610:CDS 40.0%
! TGGAAAGGCCAATCTAAAAC+TGG + chr4_1:1457747-1457766 None:intergenic 40.0%
AAGGGCCATTATGAATGGAA+AGG + chr4_1:1457762-1457781 None:intergenic 40.0%
TAGTGAAGGGCCATTATGAA+TGG + chr4_1:1457767-1457786 None:intergenic 40.0%
AATGGCCCTTCACTAATGTA+TGG - chr4_1:1457772-1457791 Msa0528610:CDS 40.0%
TGTGGACATATGTGAACTGT+TGG - chr4_1:1457983-1458002 Msa0528610:five_prime_UTR 40.0%
GGATGTGCATCATAAATCAG+TGG + chr4_1:1458021-1458040 None:intergenic 40.0%
!! TTTTGGGTCCACACAAAAAG+AGG + chr4_1:1454031-1454050 None:intergenic 40.0%
GTTGATGCTTGTAAGATGCT+CGG - chr4_1:1454053-1454072 Msa0528610:three_prime_UTR 40.0%
GGGTTATTCTTGTGAGAGAT+CGG - chr4_1:1454539-1454558 Msa0528610:CDS 40.0%
TCTTAAATGATCAGCGGTGT+CGG - chr4_1:1454733-1454752 Msa0528610:intron 40.0%
!!! ACCCTTAACCTTTTTTGTGG+GGG - chr4_1:1455146-1455165 Msa0528610:CDS 40.0%
TCCCCCACAAAAAAGGTTAA+GGG + chr4_1:1455150-1455169 None:intergenic 40.0%
! ACCCTTAACCTTATTTGTGG+GGG - chr4_1:1455239-1455258 Msa0528610:intron 40.0%
TCCCCCACAAATAAGGTTAA+GGG + chr4_1:1455243-1455262 None:intergenic 40.0%
AGTTTACTCCCCCACAAATA+AGG + chr4_1:1455250-1455269 None:intergenic 40.0%
AAAATCACGGCATTGCTGAA+GGG + chr4_1:1455424-1455443 None:intergenic 40.0%
AAAAATCACGGCATTGCTGA+AGG + chr4_1:1455425-1455444 None:intergenic 40.0%
! TGTTGTTGAGCTGTTGATTG+AGG - chr4_1:1455459-1455478 Msa0528610:intron 40.0%
AGATGAGCTTGGAAAAGCTT+TGG - chr4_1:1455539-1455558 Msa0528610:intron 40.0%
GCAGTACTTAGAAATAGCAG+TGG + chr4_1:1455667-1455686 None:intergenic 40.0%
ACGAAAACAGAGACTCACAT+GGG + chr4_1:1455691-1455710 None:intergenic 40.0%
AACGAAAACAGAGACTCACA+TGG + chr4_1:1455692-1455711 None:intergenic 40.0%
CCAGTCTAAGAGTAAATCCA+GGG + chr4_1:1455888-1455907 None:intergenic 40.0%
ACCAGTCTAAGAGTAAATCC+AGG + chr4_1:1455889-1455908 None:intergenic 40.0%
TTGAAAACCTCAGCAGCAAT+GGG + chr4_1:1456256-1456275 None:intergenic 40.0%
TACGACGAGAAGAGATTGTT+TGG - chr4_1:1456289-1456308 Msa0528610:intron 40.0%
ACGACGAGAAGAGATTGTTT+GGG - chr4_1:1456290-1456309 Msa0528610:intron 40.0%
AGGGCAAAAACTTTCTATGC+TGG - chr4_1:1456334-1456353 Msa0528610:intron 40.0%
GGGCAAAAACTTTCTATGCT+GGG - chr4_1:1456335-1456354 Msa0528610:intron 40.0%
GAAAGCTAATGTTCCAGTTG+CGG - chr4_1:1456357-1456376 Msa0528610:intron 40.0%
AAAGCTAATGTTCCAGTTGC+GGG - chr4_1:1456358-1456377 Msa0528610:intron 40.0%
!!! GTTTTTTCTCGAGCAAGAAC+GGG - chr4_1:1456515-1456534 Msa0528610:CDS 40.0%
!!! TTTTTTCTCGAGCAAGAACG+GGG - chr4_1:1456516-1456535 Msa0528610:CDS 40.0%
GAGGTCAATGTACCTGTTAT+AGG - chr4_1:1456638-1456657 Msa0528610:intron 40.0%
GTCAATGTACCTGTTATAGG+AGG - chr4_1:1456641-1456660 Msa0528610:intron 40.0%
TTACGCCATTGACAAAGTTG+CGG + chr4_1:1456911-1456930 None:intergenic 40.0%
CATGTTTCTTGCAGTTATGC+TGG - chr4_1:1457072-1457091 Msa0528610:intron 40.0%
GAACTCCATTAAGACCTTTG+AGG + chr4_1:1457119-1457138 None:intergenic 40.0%
AGGAAGTTCAGCAATGAGAT+TGG + chr4_1:1457172-1457191 None:intergenic 40.0%
ACTTCCTTTCTTTGCTTCCA+AGG - chr4_1:1457185-1457204 Msa0528610:intron 40.0%
ATCACCTTGGAAGCAAAGAA+AGG + chr4_1:1457192-1457211 None:intergenic 40.0%
!! CTTGTTGTTTGTGGATGCAT+AGG - chr4_1:1457279-1457298 Msa0528610:intron 40.0%
GAATGGTGTAGAGGAAATTC+TGG - chr4_1:1457420-1457439 Msa0528610:intron 40.0%
CAAAATCTGAGAGAGAACCT+AGG + chr4_1:1457447-1457466 None:intergenic 40.0%
! GTTCAGACTTGAGGTTTTCA+AGG + chr4_1:1457480-1457499 None:intergenic 40.0%
!! ACATGTCATACATTTCTGGC+AGG - chr4_1:1457548-1457567 Msa0528610:intron 40.0%
!! ATACATTTCTGGCAGGTTAC+TGG - chr4_1:1457555-1457574 Msa0528610:intron 40.0%
CAAGAACAGTTTATTGCTGC+AGG - chr4_1:1457707-1457726 Msa0528610:CDS 40.0%
! TGGAAAGGCCAATCTAAAAC+TGG + chr4_1:1457747-1457766 None:intergenic 40.0%
AAGGGCCATTATGAATGGAA+AGG + chr4_1:1457762-1457781 None:intergenic 40.0%
TAGTGAAGGGCCATTATGAA+TGG + chr4_1:1457767-1457786 None:intergenic 40.0%
AATGGCCCTTCACTAATGTA+TGG - chr4_1:1457772-1457791 Msa0528610:CDS 40.0%
TGTGGACATATGTGAACTGT+TGG - chr4_1:1457983-1458002 Msa0528610:five_prime_UTR 40.0%
GGATGTGCATCATAAATCAG+TGG + chr4_1:1458021-1458040 None:intergenic 40.0%
TTATGCTTGGAGAGTGACGA+TGG + chr4_1:1454109-1454128 None:intergenic 45.0%
AATAGAGAGAGAGGGAGAGA+GGG + chr4_1:1454154-1454173 None:intergenic 45.0%
TCTCCCTCTCTCTCTATTCT+CGG - chr4_1:1454156-1454175 Msa0528610:three_prime_UTR 45.0%
CTTCCGAGAATAGAGAGAGA+GGG + chr4_1:1454162-1454181 None:intergenic 45.0%
TCTTCCGAGAATAGAGAGAG+AGG + chr4_1:1454163-1454182 None:intergenic 45.0%
! TTCTCGAAGCATCCATGATG+AGG - chr4_1:1454184-1454203 Msa0528610:three_prime_UTR 45.0%
AGCTTCATGAGAAGAGAGAG+GGG + chr4_1:1454333-1454352 None:intergenic 45.0%
GAGCTTCATGAGAAGAGAGA+GGG + chr4_1:1454334-1454353 None:intergenic 45.0%
TGAGCTTCATGAGAAGAGAG+AGG + chr4_1:1454335-1454354 None:intergenic 45.0%
GAGAAAGGGTTGAAACGAGA+GGG + chr4_1:1454359-1454378 None:intergenic 45.0%
AGAGAAAGGGTTGAAACGAG+AGG + chr4_1:1454360-1454379 None:intergenic 45.0%
TATGATATTGCTGGTACCCC+TGG - chr4_1:1454381-1454400 Msa0528610:three_prime_UTR 45.0%
!! GGAGTTGATGTGGCTAACAT+CGG + chr4_1:1454415-1454434 None:intergenic 45.0%
!! TGAAAAGGGTACCTGAGATC+TGG + chr4_1:1454436-1454455 None:intergenic 45.0%
! ATCTCAGGTACCCTTTTCAC+TGG - chr4_1:1454437-1454456 Msa0528610:three_prime_UTR 45.0%
GTGTCTATGTCTGTCTTGTG+CGG - chr4_1:1454763-1454782 Msa0528610:intron 45.0%
CTCCCCCACAAAAAAGGTTA+AGG + chr4_1:1455151-1455170 None:intergenic 45.0%
AGTTCACTCCCCCACAAAAA+AGG + chr4_1:1455157-1455176 None:intergenic 45.0%
CTCCCCCACAAATAAGGTTA+AGG + chr4_1:1455244-1455263 None:intergenic 45.0%
! TGAGCTTGGAAAAGCTTTGG+AGG - chr4_1:1455542-1455561 Msa0528610:intron 45.0%
!! GAGCTTGGAAAAGCTTTGGA+GGG - chr4_1:1455543-1455562 Msa0528610:intron 45.0%
GACGTTGTTATCATTCCTGC+CGG - chr4_1:1455570-1455589 Msa0528610:intron 45.0%
AGATCATCACGAGTCATTCC+AGG + chr4_1:1455609-1455628 None:intergenic 45.0%
GAAAACAGAGACTCACATGG+GGG + chr4_1:1455689-1455708 None:intergenic 45.0%
CGAAAACAGAGACTCACATG+GGG + chr4_1:1455690-1455709 None:intergenic 45.0%
CCCTGGATTTACTCTTAGAC+TGG - chr4_1:1455885-1455904 Msa0528610:intron 45.0%
TGAAAACCTCAGCAGCAATG+GGG + chr4_1:1456255-1456274 None:intergenic 45.0%
CTTGAAAACCTCAGCAGCAA+TGG + chr4_1:1456257-1456276 None:intergenic 45.0%
!! TGCTGCTGAGGTTTTCAAGA+AGG - chr4_1:1456258-1456277 Msa0528610:intron 45.0%
!! CTGAGGTTTTCAAGAAGGCA+GGG - chr4_1:1456263-1456282 Msa0528610:intron 45.0%
CGACGAGAAGAGATTGTTTG+GGG - chr4_1:1456291-1456310 Msa0528610:intron 45.0%
ACACTTTACATACCCGCAAC+TGG + chr4_1:1456373-1456392 None:intergenic 45.0%
! TTTTTCTCGAGCAAGAACGG+GGG - chr4_1:1456517-1456536 Msa0528610:CDS 45.0%
GGAGAATAGTAACTCCTGCA+TGG + chr4_1:1456667-1456686 None:intergenic 45.0%
!! TCATCATCCAGATTGGCTTG+AGG + chr4_1:1456814-1456833 None:intergenic 45.0%
! TCATTAAGGCTCTAACTGCG+AGG - chr4_1:1456836-1456855 Msa0528610:intron 45.0%
AACCTCTGTTCCTCCATCTT+GGG + chr4_1:1456863-1456882 None:intergenic 45.0%
TAGCCATGTTGATACTGGAC+TGG - chr4_1:1456940-1456959 Msa0528610:intron 45.0%
TGTCCAGTCCAGTATCAACA+TGG + chr4_1:1456946-1456965 None:intergenic 45.0%
ACTACACGAAAAACTCACCC+AGG + chr4_1:1457036-1457055 None:intergenic 45.0%
GAGGCAAGCATCAGCAAATA+TGG + chr4_1:1457100-1457119 None:intergenic 45.0%
TTTGCTGATGCTTGCCTCAA+AGG - chr4_1:1457102-1457121 Msa0528610:intron 45.0%
GCTTGCCTCAAAGGTCTTAA+TGG - chr4_1:1457111-1457130 Msa0528610:intron 45.0%
TACGAGCACTCAACAACATC+TGG + chr4_1:1457141-1457160 None:intergenic 45.0%
CATTGCAGTTTCGATCACCT+TGG + chr4_1:1457205-1457224 None:intergenic 45.0%
GATTGGGAAGAATGGTGTAG+AGG - chr4_1:1457411-1457430 Msa0528610:intron 45.0%
TGACATGTTCGATTACTGGG+AGG + chr4_1:1457536-1457555 None:intergenic 45.0%
TTATGCTTGGAGAGTGACGA+TGG + chr4_1:1454109-1454128 None:intergenic 45.0%
AATAGAGAGAGAGGGAGAGA+GGG + chr4_1:1454154-1454173 None:intergenic 45.0%
TCTCCCTCTCTCTCTATTCT+CGG - chr4_1:1454156-1454175 Msa0528610:three_prime_UTR 45.0%
CTTCCGAGAATAGAGAGAGA+GGG + chr4_1:1454162-1454181 None:intergenic 45.0%
TCTTCCGAGAATAGAGAGAG+AGG + chr4_1:1454163-1454182 None:intergenic 45.0%
! TTCTCGAAGCATCCATGATG+AGG - chr4_1:1454184-1454203 Msa0528610:three_prime_UTR 45.0%
AGCTTCATGAGAAGAGAGAG+GGG + chr4_1:1454333-1454352 None:intergenic 45.0%
GAGCTTCATGAGAAGAGAGA+GGG + chr4_1:1454334-1454353 None:intergenic 45.0%
TGAGCTTCATGAGAAGAGAG+AGG + chr4_1:1454335-1454354 None:intergenic 45.0%
GAGAAAGGGTTGAAACGAGA+GGG + chr4_1:1454359-1454378 None:intergenic 45.0%
AGAGAAAGGGTTGAAACGAG+AGG + chr4_1:1454360-1454379 None:intergenic 45.0%
TATGATATTGCTGGTACCCC+TGG - chr4_1:1454381-1454400 Msa0528610:three_prime_UTR 45.0%
!! GGAGTTGATGTGGCTAACAT+CGG + chr4_1:1454415-1454434 None:intergenic 45.0%
!! TGAAAAGGGTACCTGAGATC+TGG + chr4_1:1454436-1454455 None:intergenic 45.0%
! ATCTCAGGTACCCTTTTCAC+TGG - chr4_1:1454437-1454456 Msa0528610:three_prime_UTR 45.0%
GTGTCTATGTCTGTCTTGTG+CGG - chr4_1:1454763-1454782 Msa0528610:intron 45.0%
CTCCCCCACAAAAAAGGTTA+AGG + chr4_1:1455151-1455170 None:intergenic 45.0%
AGTTCACTCCCCCACAAAAA+AGG + chr4_1:1455157-1455176 None:intergenic 45.0%
CTCCCCCACAAATAAGGTTA+AGG + chr4_1:1455244-1455263 None:intergenic 45.0%
! TGAGCTTGGAAAAGCTTTGG+AGG - chr4_1:1455542-1455561 Msa0528610:intron 45.0%
!! GAGCTTGGAAAAGCTTTGGA+GGG - chr4_1:1455543-1455562 Msa0528610:intron 45.0%
GACGTTGTTATCATTCCTGC+CGG - chr4_1:1455570-1455589 Msa0528610:intron 45.0%
AGATCATCACGAGTCATTCC+AGG + chr4_1:1455609-1455628 None:intergenic 45.0%
GAAAACAGAGACTCACATGG+GGG + chr4_1:1455689-1455708 None:intergenic 45.0%
CGAAAACAGAGACTCACATG+GGG + chr4_1:1455690-1455709 None:intergenic 45.0%
CCCTGGATTTACTCTTAGAC+TGG - chr4_1:1455885-1455904 Msa0528610:intron 45.0%
TGAAAACCTCAGCAGCAATG+GGG + chr4_1:1456255-1456274 None:intergenic 45.0%
CTTGAAAACCTCAGCAGCAA+TGG + chr4_1:1456257-1456276 None:intergenic 45.0%
!! TGCTGCTGAGGTTTTCAAGA+AGG - chr4_1:1456258-1456277 Msa0528610:intron 45.0%
!! CTGAGGTTTTCAAGAAGGCA+GGG - chr4_1:1456263-1456282 Msa0528610:intron 45.0%
CGACGAGAAGAGATTGTTTG+GGG - chr4_1:1456291-1456310 Msa0528610:intron 45.0%
ACACTTTACATACCCGCAAC+TGG + chr4_1:1456373-1456392 None:intergenic 45.0%
! TTTTTCTCGAGCAAGAACGG+GGG - chr4_1:1456517-1456536 Msa0528610:CDS 45.0%
GGAGAATAGTAACTCCTGCA+TGG + chr4_1:1456667-1456686 None:intergenic 45.0%
!! TCATCATCCAGATTGGCTTG+AGG + chr4_1:1456814-1456833 None:intergenic 45.0%
! TCATTAAGGCTCTAACTGCG+AGG - chr4_1:1456836-1456855 Msa0528610:intron 45.0%
AACCTCTGTTCCTCCATCTT+GGG + chr4_1:1456863-1456882 None:intergenic 45.0%
TAGCCATGTTGATACTGGAC+TGG - chr4_1:1456940-1456959 Msa0528610:intron 45.0%
TGTCCAGTCCAGTATCAACA+TGG + chr4_1:1456946-1456965 None:intergenic 45.0%
ACTACACGAAAAACTCACCC+AGG + chr4_1:1457036-1457055 None:intergenic 45.0%
GAGGCAAGCATCAGCAAATA+TGG + chr4_1:1457100-1457119 None:intergenic 45.0%
TTTGCTGATGCTTGCCTCAA+AGG - chr4_1:1457102-1457121 Msa0528610:intron 45.0%
GCTTGCCTCAAAGGTCTTAA+TGG - chr4_1:1457111-1457130 Msa0528610:intron 45.0%
TACGAGCACTCAACAACATC+TGG + chr4_1:1457141-1457160 None:intergenic 45.0%
CATTGCAGTTTCGATCACCT+TGG + chr4_1:1457205-1457224 None:intergenic 45.0%
GATTGGGAAGAATGGTGTAG+AGG - chr4_1:1457411-1457430 Msa0528610:intron 45.0%
TGACATGTTCGATTACTGGG+AGG + chr4_1:1457536-1457555 None:intergenic 45.0%
!! AATATAAATAAGAAATAAAA+AGG + chr4_1:1457841-1457860 None:intergenic 5.0%
!! AATATAAATAAGAAATAAAA+AGG + chr4_1:1457841-1457860 None:intergenic 5.0%
GAATAGAGAGAGAGGGAGAG+AGG + chr4_1:1454155-1454174 None:intergenic 50.0%
!! TGGACGGATCTGAGTATCGA+CGG + chr4_1:1454210-1454229 None:intergenic 50.0%
TAACATCGGCAGCAACACCA+GGG + chr4_1:1454401-1454420 None:intergenic 50.0%
!! CCTGAGATCTGGAGTTGATG+TGG + chr4_1:1454425-1454444 None:intergenic 50.0%
CCACATCAACTCCAGATCTC+AGG - chr4_1:1454422-1454441 Msa0528610:three_prime_UTR 50.0%
! ATGAGAGCACAAGCACTCCT+CGG - chr4_1:1454653-1454672 Msa0528610:intron 50.0%
TACGCAGGTGAAGATGAGCT+TGG - chr4_1:1455528-1455547 Msa0528610:intron 50.0%
CGAGTCATTCCAGGCTTTCT+GGG + chr4_1:1455600-1455619 None:intergenic 50.0%
ACGAGTCATTCCAGGCTTTC+TGG + chr4_1:1455601-1455620 None:intergenic 50.0%
TGGGGACAGTTGAGTTCACA+GGG + chr4_1:1456237-1456256 None:intergenic 50.0%
ATGGGGACAGTTGAGTTCAC+AGG + chr4_1:1456238-1456257 None:intergenic 50.0%
!! GCTGAGGTTTTCAAGAAGGC+AGG - chr4_1:1456262-1456281 Msa0528610:intron 50.0%
!!! TTTTGGCTTCCAAACGCTGC+TGG - chr4_1:1456747-1456766 Msa0528610:intron 50.0%
TTCCAAACGCTGCTGGTATG+TGG - chr4_1:1456754-1456773 Msa0528610:intron 50.0%
TACCACATACCAGCAGCGTT+TGG + chr4_1:1456759-1456778 None:intergenic 50.0%
CAACCTCTGTTCCTCCATCT+TGG + chr4_1:1456864-1456883 None:intergenic 50.0%
AACAGAGGTTGTGACTGCCA+AGG - chr4_1:1456873-1456892 Msa0528610:intron 50.0%
GGGTTCCGCAACTTTGTCAA+TGG - chr4_1:1456903-1456922 Msa0528610:intron 50.0%
CAGGTGAGGATTGGGAAGAA+TGG - chr4_1:1457403-1457422 Msa0528610:intron 50.0%
GTAGAGGAAATTCTGGGCCT+AGG - chr4_1:1457427-1457446 Msa0528610:intron 50.0%
GTTTGTAATGTTGCCGGCAG+AGG - chr4_1:1457625-1457644 Msa0528610:CDS 50.0%
TTATTAGGCTCAGGCTAGGG+TGG - chr4_1:1457926-1457945 Msa0528610:five_prime_UTR 50.0%
GTCCACGTGGATGAGTTATG+TGG - chr4_1:1457965-1457984 Msa0528610:five_prime_UTR 50.0%
GTCCACATAACTCATCCACG+TGG + chr4_1:1457970-1457989 None:intergenic 50.0%
GAATAGAGAGAGAGGGAGAG+AGG + chr4_1:1454155-1454174 None:intergenic 50.0%
!! TGGACGGATCTGAGTATCGA+CGG + chr4_1:1454210-1454229 None:intergenic 50.0%
TAACATCGGCAGCAACACCA+GGG + chr4_1:1454401-1454420 None:intergenic 50.0%
!! CCTGAGATCTGGAGTTGATG+TGG + chr4_1:1454425-1454444 None:intergenic 50.0%
CCACATCAACTCCAGATCTC+AGG - chr4_1:1454422-1454441 Msa0528610:three_prime_UTR 50.0%
! ATGAGAGCACAAGCACTCCT+CGG - chr4_1:1454653-1454672 Msa0528610:intron 50.0%
TACGCAGGTGAAGATGAGCT+TGG - chr4_1:1455528-1455547 Msa0528610:intron 50.0%
CGAGTCATTCCAGGCTTTCT+GGG + chr4_1:1455600-1455619 None:intergenic 50.0%
ACGAGTCATTCCAGGCTTTC+TGG + chr4_1:1455601-1455620 None:intergenic 50.0%
TGGGGACAGTTGAGTTCACA+GGG + chr4_1:1456237-1456256 None:intergenic 50.0%
ATGGGGACAGTTGAGTTCAC+AGG + chr4_1:1456238-1456257 None:intergenic 50.0%
!! GCTGAGGTTTTCAAGAAGGC+AGG - chr4_1:1456262-1456281 Msa0528610:intron 50.0%
!!! TTTTGGCTTCCAAACGCTGC+TGG - chr4_1:1456747-1456766 Msa0528610:intron 50.0%
TTCCAAACGCTGCTGGTATG+TGG - chr4_1:1456754-1456773 Msa0528610:intron 50.0%
TACCACATACCAGCAGCGTT+TGG + chr4_1:1456759-1456778 None:intergenic 50.0%
CAACCTCTGTTCCTCCATCT+TGG + chr4_1:1456864-1456883 None:intergenic 50.0%
AACAGAGGTTGTGACTGCCA+AGG - chr4_1:1456873-1456892 Msa0528610:intron 50.0%
GGGTTCCGCAACTTTGTCAA+TGG - chr4_1:1456903-1456922 Msa0528610:intron 50.0%
CAGGTGAGGATTGGGAAGAA+TGG - chr4_1:1457403-1457422 Msa0528610:intron 50.0%
GTAGAGGAAATTCTGGGCCT+AGG - chr4_1:1457427-1457446 Msa0528610:intron 50.0%
GTTTGTAATGTTGCCGGCAG+AGG - chr4_1:1457625-1457644 Msa0528610:CDS 50.0%
TTATTAGGCTCAGGCTAGGG+TGG - chr4_1:1457926-1457945 Msa0528610:five_prime_UTR 50.0%
GTCCACGTGGATGAGTTATG+TGG - chr4_1:1457965-1457984 Msa0528610:five_prime_UTR 50.0%
GTCCACATAACTCATCCACG+TGG + chr4_1:1457970-1457989 None:intergenic 50.0%
!! GAGTATCGACGGCCTCATCA+TGG + chr4_1:1454199-1454218 None:intergenic 55.0%
CTTGCGTTCAGGAACCGGTT+CGG + chr4_1:1454274-1454293 None:intergenic 55.0%
AGAATGGCCACCTTGCGTTC+AGG + chr4_1:1454285-1454304 None:intergenic 55.0%
GAACGCAAGGTGGCCATTCT+CGG - chr4_1:1454285-1454304 Msa0528610:three_prime_UTR 55.0%
AACATCGGCAGCAACACCAG+GGG + chr4_1:1454400-1454419 None:intergenic 55.0%
CTAACATCGGCAGCAACACC+AGG + chr4_1:1454402-1454421 None:intergenic 55.0%
GCACAAGCACTCCTCGGATT+AGG - chr4_1:1454659-1454678 Msa0528610:intron 55.0%
! TCCTCGGATTAGGCGTGTCT+CGG - chr4_1:1454669-1454688 Msa0528610:intron 55.0%
ATGCAGGTAACTGGGTACGC+AGG - chr4_1:1455513-1455532 Msa0528610:intron 55.0%
AACTGTCCCCATTGCTGCTG+AGG - chr4_1:1456246-1456265 Msa0528610:intron 55.0%
CCTGCATGGCCTCCTATAAC+AGG + chr4_1:1456653-1456672 None:intergenic 55.0%
CCTGTTATAGGAGGCCATGC+AGG - chr4_1:1456650-1456669 Msa0528610:intron 55.0%
GGCATCACCTCAAGCCAATC+TGG - chr4_1:1456804-1456823 Msa0528610:intron 55.0%
CTAACTGCGAGGACCCAAGA+TGG - chr4_1:1456847-1456866 Msa0528610:intron 55.0%
GACCCAAGATGGAGGAACAG+AGG - chr4_1:1456858-1456877 Msa0528610:intron 55.0%
TGTGACTGCCAAGGCTGGAA+AGG - chr4_1:1456882-1456901 Msa0528610:intron 55.0%
GTGACTGCCAAGGCTGGAAA+GGG - chr4_1:1456883-1456902 Msa0528610:intron 55.0%
TGTAATGTTGCCGGCAGAGG+TGG - chr4_1:1457628-1457647 Msa0528610:CDS 55.0%
AACAAAGCCACCACCTCTGC+CGG + chr4_1:1457641-1457660 None:intergenic 55.0%
!! GAGTATCGACGGCCTCATCA+TGG + chr4_1:1454199-1454218 None:intergenic 55.0%
CTTGCGTTCAGGAACCGGTT+CGG + chr4_1:1454274-1454293 None:intergenic 55.0%
AGAATGGCCACCTTGCGTTC+AGG + chr4_1:1454285-1454304 None:intergenic 55.0%
GAACGCAAGGTGGCCATTCT+CGG - chr4_1:1454285-1454304 Msa0528610:three_prime_UTR 55.0%
AACATCGGCAGCAACACCAG+GGG + chr4_1:1454400-1454419 None:intergenic 55.0%
CTAACATCGGCAGCAACACC+AGG + chr4_1:1454402-1454421 None:intergenic 55.0%
GCACAAGCACTCCTCGGATT+AGG - chr4_1:1454659-1454678 Msa0528610:intron 55.0%
! TCCTCGGATTAGGCGTGTCT+CGG - chr4_1:1454669-1454688 Msa0528610:intron 55.0%
ATGCAGGTAACTGGGTACGC+AGG - chr4_1:1455513-1455532 Msa0528610:intron 55.0%
AACTGTCCCCATTGCTGCTG+AGG - chr4_1:1456246-1456265 Msa0528610:intron 55.0%
CCTGCATGGCCTCCTATAAC+AGG + chr4_1:1456653-1456672 None:intergenic 55.0%
CCTGTTATAGGAGGCCATGC+AGG - chr4_1:1456650-1456669 Msa0528610:intron 55.0%
GGCATCACCTCAAGCCAATC+TGG - chr4_1:1456804-1456823 Msa0528610:intron 55.0%
CTAACTGCGAGGACCCAAGA+TGG - chr4_1:1456847-1456866 Msa0528610:intron 55.0%
GACCCAAGATGGAGGAACAG+AGG - chr4_1:1456858-1456877 Msa0528610:intron 55.0%
TGTGACTGCCAAGGCTGGAA+AGG - chr4_1:1456882-1456901 Msa0528610:intron 55.0%
GTGACTGCCAAGGCTGGAAA+GGG - chr4_1:1456883-1456902 Msa0528610:intron 55.0%
TGTAATGTTGCCGGCAGAGG+TGG - chr4_1:1457628-1457647 Msa0528610:CDS 55.0%
AACAAAGCCACCACCTCTGC+CGG + chr4_1:1457641-1457660 None:intergenic 55.0%
! CGAACCGGTTCCTGAACGCA+AGG - chr4_1:1454272-1454291 Msa0528610:three_prime_UTR 60.0%
! ACCGGTTCCTGAACGCAAGG+TGG - chr4_1:1454275-1454294 Msa0528610:three_prime_UTR 60.0%
GCCACCTTGCGTTCAGGAAC+CGG + chr4_1:1454279-1454298 None:intergenic 60.0%
TCTCGAGCAAGAACGGGGGT+CGG - chr4_1:1456521-1456540 Msa0528610:intron 60.0%
ACTGCGAGGACCCAAGATGG+AGG - chr4_1:1456850-1456869 Msa0528610:intron 60.0%
GAGGTTGTGACTGCCAAGGC+TGG - chr4_1:1456877-1456896 Msa0528610:intron 60.0%
TGCGGAACCCTTTCCAGCCT+TGG + chr4_1:1456893-1456912 None:intergenic 60.0%
AATGTTGCCGGCAGAGGTGG+TGG - chr4_1:1457631-1457650 Msa0528610:CDS 60.0%
CTCAGGCTAGGGTGGATGAG+TGG - chr4_1:1457934-1457953 Msa0528610:five_prime_UTR 60.0%
AGGCTAGGGTGGATGAGTGG+AGG - chr4_1:1457937-1457956 Msa0528610:five_prime_UTR 60.0%
AGTGGAGGAAGTCGTCCACG+TGG - chr4_1:1457952-1457971 Msa0528610:five_prime_UTR 60.0%
! CGAACCGGTTCCTGAACGCA+AGG - chr4_1:1454272-1454291 Msa0528610:three_prime_UTR 60.0%
! ACCGGTTCCTGAACGCAAGG+TGG - chr4_1:1454275-1454294 Msa0528610:three_prime_UTR 60.0%
GCCACCTTGCGTTCAGGAAC+CGG + chr4_1:1454279-1454298 None:intergenic 60.0%
TCTCGAGCAAGAACGGGGGT+CGG - chr4_1:1456521-1456540 Msa0528610:intron 60.0%
ACTGCGAGGACCCAAGATGG+AGG - chr4_1:1456850-1456869 Msa0528610:intron 60.0%
GAGGTTGTGACTGCCAAGGC+TGG - chr4_1:1456877-1456896 Msa0528610:intron 60.0%
TGCGGAACCCTTTCCAGCCT+TGG + chr4_1:1456893-1456912 None:intergenic 60.0%
AATGTTGCCGGCAGAGGTGG+TGG - chr4_1:1457631-1457650 Msa0528610:CDS 60.0%
CTCAGGCTAGGGTGGATGAG+TGG - chr4_1:1457934-1457953 Msa0528610:five_prime_UTR 60.0%
AGGCTAGGGTGGATGAGTGG+AGG - chr4_1:1457937-1457956 Msa0528610:five_prime_UTR 60.0%
AGTGGAGGAAGTCGTCCACG+TGG - chr4_1:1457952-1457971 Msa0528610:five_prime_UTR 60.0%
! GCGGGTTATGCTGCGGGACA+CGG + chr4_1:1454238-1454257 None:intergenic 65.0%
!! AGCCACGGCGGGTTATGCTG+CGG + chr4_1:1454245-1454264 None:intergenic 65.0%
TTCGGTGGCATAGCCACGGC+GGG + chr4_1:1454256-1454275 None:intergenic 65.0%
! GTTCGGTGGCATAGCCACGG+CGG + chr4_1:1454257-1454276 None:intergenic 65.0%
!! CCGGTTCGGTGGCATAGCCA+CGG + chr4_1:1454260-1454279 None:intergenic 65.0%
CCGTGGCTATGCCACCGAAC+CGG - chr4_1:1454257-1454276 Msa0528610:three_prime_UTR 65.0%
!! GCGTTCAGGAACCGGTTCGG+TGG + chr4_1:1454271-1454290 None:intergenic 65.0%
GCCGAGACACGCCTAATCCG+AGG + chr4_1:1454673-1454692 None:intergenic 65.0%
TCCAGGCTTTCTGGGCACGC+CGG + chr4_1:1455592-1455611 None:intergenic 65.0%
GAGCAAGAACGGGGGTCGGT+GGG - chr4_1:1456525-1456544 Msa0528610:intron 65.0%
AGCAAGAACGGGGGTCGGTG+GGG - chr4_1:1456526-1456545 Msa0528610:intron 65.0%
! GCGGGTTATGCTGCGGGACA+CGG + chr4_1:1454238-1454257 None:intergenic 65.0%
!! AGCCACGGCGGGTTATGCTG+CGG + chr4_1:1454245-1454264 None:intergenic 65.0%
TTCGGTGGCATAGCCACGGC+GGG + chr4_1:1454256-1454275 None:intergenic 65.0%
! GTTCGGTGGCATAGCCACGG+CGG + chr4_1:1454257-1454276 None:intergenic 65.0%
!! CCGGTTCGGTGGCATAGCCA+CGG + chr4_1:1454260-1454279 None:intergenic 65.0%
CCGTGGCTATGCCACCGAAC+CGG - chr4_1:1454257-1454276 Msa0528610:three_prime_UTR 65.0%
!! GCGTTCAGGAACCGGTTCGG+TGG + chr4_1:1454271-1454290 None:intergenic 65.0%
GCCGAGACACGCCTAATCCG+AGG + chr4_1:1454673-1454692 None:intergenic 65.0%
TCCAGGCTTTCTGGGCACGC+CGG + chr4_1:1455592-1455611 None:intergenic 65.0%
GAGCAAGAACGGGGGTCGGT+GGG - chr4_1:1456525-1456544 Msa0528610:intron 65.0%
AGCAAGAACGGGGGTCGGTG+GGG - chr4_1:1456526-1456545 Msa0528610:intron 65.0%
GCGGGACACGGCTGACTGGA+CGG + chr4_1:1454226-1454245 None:intergenic 70.0%
TGCTGCGGGACACGGCTGAC+TGG + chr4_1:1454230-1454249 None:intergenic 70.0%
TCCCGCAGCATAACCCGCCG+TGG - chr4_1:1454240-1454259 Msa0528610:three_prime_UTR 70.0%
!! GCCACGGCGGGTTATGCTGC+GGG + chr4_1:1454244-1454263 None:intergenic 70.0%
!! GTGGCCATTCTCGGTGCCGC+CGG - chr4_1:1454294-1454313 Msa0528610:three_prime_UTR 70.0%
!! CCATTCTCGGTGCCGCCGGT+GGG - chr4_1:1454298-1454317 Msa0528610:three_prime_UTR 70.0%
GAGGGGCTGACCGATCCCAC+CGG + chr4_1:1454316-1454335 None:intergenic 70.0%
CGAGCAAGAACGGGGGTCGG+TGG - chr4_1:1456524-1456543 Msa0528610:intron 70.0%
GAACGGGGGTCGGTGGGGAA+AGG - chr4_1:1456531-1456550 Msa0528610:intron 70.0%
GCGGGACACGGCTGACTGGA+CGG + chr4_1:1454226-1454245 None:intergenic 70.0%
TGCTGCGGGACACGGCTGAC+TGG + chr4_1:1454230-1454249 None:intergenic 70.0%
TCCCGCAGCATAACCCGCCG+TGG - chr4_1:1454240-1454259 Msa0528610:three_prime_UTR 70.0%
!! GCCACGGCGGGTTATGCTGC+GGG + chr4_1:1454244-1454263 None:intergenic 70.0%
!! GTGGCCATTCTCGGTGCCGC+CGG - chr4_1:1454294-1454313 Msa0528610:three_prime_UTR 70.0%
!! CCATTCTCGGTGCCGCCGGT+GGG - chr4_1:1454298-1454317 Msa0528610:three_prime_UTR 70.0%
GAGGGGCTGACCGATCCCAC+CGG + chr4_1:1454316-1454335 None:intergenic 70.0%
CGAGCAAGAACGGGGGTCGG+TGG - chr4_1:1456524-1456543 Msa0528610:intron 70.0%
GAACGGGGGTCGGTGGGGAA+AGG - chr4_1:1456531-1456550 Msa0528610:intron 70.0%
!! GCCATTCTCGGTGCCGCCGG+TGG - chr4_1:1454297-1454316 Msa0528610:three_prime_UTR 75.0%
! CCCACCGGCGGCACCGAGAA+TGG + chr4_1:1454301-1454320 None:intergenic 75.0%
!! CTCGGTGCCGCCGGTGGGAT+CGG - chr4_1:1454303-1454322 Msa0528610:three_prime_UTR 75.0%
GGGCTGACCGATCCCACCGG+CGG + chr4_1:1454313-1454332 None:intergenic 75.0%
GGCTTTCTGGGCACGCCGGC+AGG + chr4_1:1455588-1455607 None:intergenic 75.0%
GCCGGCGTGCCCAGAAAGCC+TGG - chr4_1:1455588-1455607 Msa0528610:intron 75.0%
!! GCCATTCTCGGTGCCGCCGG+TGG - chr4_1:1454297-1454316 Msa0528610:three_prime_UTR 75.0%
! CCCACCGGCGGCACCGAGAA+TGG + chr4_1:1454301-1454320 None:intergenic 75.0%
!! CTCGGTGCCGCCGGTGGGAT+CGG - chr4_1:1454303-1454322 Msa0528610:three_prime_UTR 75.0%
GGGCTGACCGATCCCACCGG+CGG + chr4_1:1454313-1454332 None:intergenic 75.0%
GGCTTTCTGGGCACGCCGGC+AGG + chr4_1:1455588-1455607 None:intergenic 75.0%
GCCGGCGTGCCCAGAAAGCC+TGG - chr4_1:1455588-1455607 Msa0528610:intron 75.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 1453984 1458073 1453984 ID=Msa0528610;Name=Msa0528610
chr4_1 mRNA 1453984 1458073 1453984 ID=Msa0528610-mRNA-1;Parent=Msa0528610;Name=Msa0528610-mRNA-1;_AED=0.07;_eAED=0.07;_QI=214|1|1|1|1|1|7|530|343
chr4_1 exon 1453984 1454651 1453984 ID=Msa0528610-mRNA-1:exon:433;Parent=Msa0528610-mRNA-1
chr4_1 exon 1454851 1454971 1454851 ID=Msa0528610-mRNA-1:exon:432;Parent=Msa0528610-mRNA-1
chr4_1 exon 1455131 1455252 1455131 ID=Msa0528610-mRNA-1:exon:431;Parent=Msa0528610-mRNA-1
chr4_1 exon 1455357 1455418 1455357 ID=Msa0528610-mRNA-1:exon:430;Parent=Msa0528610-mRNA-1
chr4_1 exon 1455678 1455846 1455678 ID=Msa0528610-mRNA-1:exon:429;Parent=Msa0528610-mRNA-1
chr4_1 exon 1456365 1456538 1456365 ID=Msa0528610-mRNA-1:exon:428;Parent=Msa0528610-mRNA-1
chr4_1 exon 1457614 1458073 1457614 ID=Msa0528610-mRNA-1:exon:427;Parent=Msa0528610-mRNA-1
chr4_1 five_prime_UTR 1457860 1458073 1457860 ID=Msa0528610-mRNA-1:five_prime_utr;Parent=Msa0528610-mRNA-1
chr4_1 CDS 1457614 1457859 1457614 ID=Msa0528610-mRNA-1:cds;Parent=Msa0528610-mRNA-1
chr4_1 CDS 1456365 1456538 1456365 ID=Msa0528610-mRNA-1:cds;Parent=Msa0528610-mRNA-1
chr4_1 CDS 1455678 1455846 1455678 ID=Msa0528610-mRNA-1:cds;Parent=Msa0528610-mRNA-1
chr4_1 CDS 1455357 1455418 1455357 ID=Msa0528610-mRNA-1:cds;Parent=Msa0528610-mRNA-1
chr4_1 CDS 1455131 1455252 1455131 ID=Msa0528610-mRNA-1:cds;Parent=Msa0528610-mRNA-1
chr4_1 CDS 1454851 1454971 1454851 ID=Msa0528610-mRNA-1:cds;Parent=Msa0528610-mRNA-1
chr4_1 CDS 1454514 1454651 1454514 ID=Msa0528610-mRNA-1:cds;Parent=Msa0528610-mRNA-1
chr4_1 three_prime_UTR 1453984 1454513 1453984 ID=Msa0528610-mRNA-1:three_prime_utr;Parent=Msa0528610-mRNA-1
Gene Sequence

>Msa0528610

ATGATGAGGCCGTCGATACTCAGATCCGTCCAGTCAGCCGTGTCCCGCAGCATAACCCGCCGTGGCTATGCCACCGAACCGGTTCCTGAACGCAAGGTGGCCATTCTCGGTGCCGCCGGTGGGATCGGTCAGCCCCTCTCTCTTCTCATGAAGCTCAACCCTCTCGTTTCAACCCTTTCTCTTTATGATATTGCTGGTACCCCTGGTGTTGCTGCCGATGTTAGCCACATCAACTCCAGATCTCAGGTAACTGGGTACGCAGGTGAAGATGAGCTTGGAAAAGCTTTGGAGGGTGCTGACGTTGTTATCATTCCTGCCGGCGTGCCCAGAAAGCCTGGAATGACTCGTGATGATCTTTTCAACATTAACGCTGGCATTGTTAAATCACTTGCCACTGCTATTTCTAAGTACTGCCCCCATGCTCTTGTTAACATGATAAGCAACCCTGTGAACTCAACTGTCCCCATTGCTGCTGAGGTTTTCAAGAAGGCAGGGACATACGACGAGAAGAGATTGTTTGGGGTTACAACTCTTGATGTAGTTAGGGCAAAAACTTTCTATGCTGGGAAAGCTAATGTTCCAGTTGCGGAGGTCAATGTACCTGTTATAGGAGGCCATGCAGGAGTTACTATTCTCCCACTATTTTCTCAGGCATCACCTCAAGCCAATCTGGATGATGATGTCATTAAGGCTCTAACTGCGAGGACCCAAGATGGAGGAACAGAGGTTGTGACTGCCAAGGCTGGAAAGGGTTCCGCAACTTTGTCAATGGCTTATGCTGGAGCCATATTTGCTGATGCTTGCCTCAAAGGTCTTAATGGAGTTCCAGATGTTGTTGAGTGCTCGTATGTGCAATCCAATCTCATTGCTGAACTTCCTTTCTTTGCTTCCAAGGTGAGGATTGGGAAGAATGGTGTAGAGGAAATTCTGGGCCTAGGTTCTCTCTCAGATTTTGAGAAACAAGGCCTTGAAAACCTCAAGTCTGAACTTAAGTCATCTATTGAGAAGGGAATCAAATTTGCCTCCCAGTAA

Protein sequence

>Msa0528610

MMRPSILRSVQSAVSRSITRRGYATEPVPERKVAILGAAGGIGQPLSLLMKLNPLVSTLSLYDIAGTPGVAADVSHINSRSQVTGYAGEDELGKALEGADVVIIPAGVPRKPGMTRDDLFNINAGIVKSLATAISKYCPHALVNMISNPVNSTVPIAAEVFKKAGTYDEKRLFGVTTLDVVRAKTFYAGKANVPVAEVNVPVIGGHAGVTILPLFSQASPQANLDDDVIKALTARTQDGGTEVVTAKAGKGSATLSMAYAGAIFADACLKGLNGVPDVVECSYVQSNLIAELPFFASKVRIGKNGVEEILGLGSLSDFEKQGLENLKSELKSSIEKGIKFASQ*