AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0389610

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0389610 MtrunA17_Chr8g0360501 97.959 343 6 1 1 342 1 343 0.0 671
Msa0389610 MtrunA17_Chr5g0400691 66.346 312 103 2 29 339 45 355 2.13e-146 417
Msa0389610 MtrunA17_Chr4g0049321 64.423 312 109 2 29 339 43 353 3.03e-138 396
Msa0389610 MtrunA17_Chr4g0060781 61.250 320 120 3 26 342 85 403 8.25e-137 394
Msa0389610 MtrunA17_Chr8g0381211 52.113 71 31 2 255 325 419 486 4.89e-14 72.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0389610 AT3G15020.1 81.924 343 59 3 1 342 1 341 0.0 567
Msa0389610 AT1G53240.1 80.175 343 65 3 1 342 1 341 0.0 558
Msa0389610 AT3G15020.2 81.848 303 52 3 1 302 1 301 4.98e-180 501
Msa0389610 AT2G22780.1 64.762 315 109 2 29 342 41 354 6.51e-144 411
Msa0389610 AT3G47520.1 59.104 335 131 4 8 337 58 391 8.71e-135 389
Msa0389610 AT5G09660.2 65.064 312 107 2 29 339 20 330 7.85e-132 379
Msa0389610 AT5G09660.1 65.064 312 107 2 29 339 41 351 1.49e-131 379
Msa0389610 AT5G09660.5 64.309 311 110 1 29 339 41 350 2.52e-130 376
Msa0389610 AT5G09660.3 66.917 266 87 1 29 293 20 285 2.36e-111 328
Msa0389610 AT5G09660.4 66.917 266 87 1 29 293 41 306 5.53e-111 327

Find 165 sgRNAs with CRISPR-Local

Find 670 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTACAAGCATCAACTATTT+TGG 0.053862 3_1:+94548980 None:intergenic
ACGAGTCATTCCAGGCTTTC+TGG 0.199155 3_1:+94547425 None:intergenic
AATCTCTACTCGCAATAAAT+TGG 0.237446 3_1:-94548944 Msa0389610:five_prime_UTR
AAATTTGATTCGGTTCTAAA+TGG 0.244498 3_1:+94545440 None:intergenic
ATACATTTCTGGCAGGTTAC+TGG 0.259383 3_1:-94545469 Msa0389610:three_prime_UTR
AGATCTAAACCAAAATAAAA+TGG 0.281643 3_1:+94545139 None:intergenic
GCTTGCCTCAAAGGTCTTAA+TGG 0.290402 3_1:-94545913 Msa0389610:CDS
AATATAAATAAGAAATAAAA+AGG 0.291651 3_1:+94545186 None:intergenic
AAAGTGGTTATAAAATTATT+AGG 0.296327 3_1:-94545113 Msa0389610:three_prime_UTR
GAATGGTGTAGAGGAAATTC+TGG 0.304636 3_1:-94545604 Msa0389610:CDS
TCGAACATGTCATACATTTC+TGG 0.317383 3_1:-94545480 Msa0389610:three_prime_UTR
AGAAAAGAATTGTATAAGAT+AGG 0.319794 3_1:+94544983 None:intergenic
TTACAACTCTTGATGTAGTT+AGG 0.320658 3_1:-94546709 Msa0389610:CDS
CAACCTCTGTTCCTCCATCT+TGG 0.327215 3_1:+94546163 None:intergenic
GAGGCAAGCATCAGCAAATA+TGG 0.328154 3_1:+94545927 None:intergenic
TACGACGAGAAGAGATTGTT+TGG 0.338064 3_1:-94546734 Msa0389610:CDS
TCTGGATGATGATGTCATTA+AGG 0.345680 3_1:-94546202 Msa0389610:CDS
TGTATGACATGTTCGATTAC+TGG 0.355821 3_1:+94545487 None:intergenic
CTTTCTCTTTATGATATTGC+TGG 0.358856 3_1:-94548653 Msa0389610:CDS
GGCTTTCTGGGCACGCCGGC+AGG 0.365332 3_1:+94547438 None:intergenic
CAGATTTAATTATTAAATCT+AGG 0.369909 3_1:+94545340 None:intergenic
GAACGCAAGGTGGCCATTCT+CGG 0.375746 3_1:-94548740 Msa0389610:CDS
GGCATCACCTCAAGCCAATC+TGG 0.378443 3_1:-94546220 Msa0389610:CDS
GCCACCTTGCGTTCAGGAAC+CGG 0.381271 3_1:+94548749 None:intergenic
GAAAAGAATTGTATAAGATA+GGG 0.382735 3_1:+94544984 None:intergenic
CATGTTTCTTGCAGTTATGC+TGG 0.385172 3_1:-94545952 Msa0389610:intron
ATTGGCCTTTCCATTCATAA+TGG 0.385465 3_1:-94545270 Msa0389610:three_prime_UTR
TCTCCCTCTCTCTCTATTCT+CGG 0.385732 3_1:-94548869 Msa0389610:five_prime_UTR
AACCTCTGTTCCTCCATCTT+GGG 0.392469 3_1:+94546164 None:intergenic
ACAATTGTTTGTAATGTTGC+CGG 0.399363 3_1:-94545405 Msa0389610:three_prime_UTR
ACACTTTACATACCCGCAAC+TGG 0.402277 3_1:+94546654 None:intergenic
TGCGGAACCCTTTCCAGCCT+TGG 0.405924 3_1:+94546134 None:intergenic
AGGAAGTTCAGCAATGAGAT+TGG 0.408221 3_1:+94545855 None:intergenic
CAAGAACAGTTTATTGCTGC+AGG 0.409718 3_1:-94545317 Msa0389610:three_prime_UTR
TGGAAAGGCCAATCTAAAAC+TGG 0.411828 3_1:+94545280 None:intergenic
CTCGGTGCCGCCGGTGGGAT+CGG 0.412931 3_1:-94548722 Msa0389610:CDS
CCTGCATGGCCTCCTATAAC+AGG 0.414819 3_1:+94546374 None:intergenic
GAAGCTAATGTTCCAGTTGC+GGG 0.415422 3_1:-94546666 Msa0389610:intron
AGATGAGCTTGGAAAAGCTT+TGG 0.416154 3_1:-94547484 Msa0389610:CDS
TGAATTTGCAAAATTTGATT+CGG 0.416301 3_1:+94545430 None:intergenic
ACGACGAGAAGAGATTGTTT+GGG 0.422259 3_1:-94546733 Msa0389610:CDS
TTGAAAACCTCAGCAGCAAT+GGG 0.424506 3_1:+94546770 None:intergenic
GCCGGCGTGCCCAGAAAGCC+TGG 0.425749 3_1:-94547435 Msa0389610:CDS
CGAGTCATTCCAGGCTTTCT+GGG 0.427884 3_1:+94547426 None:intergenic
TACGAGCACTCAACAACATC+TGG 0.433263 3_1:+94545886 None:intergenic
CAGCAATATCATAAAGAGAA+AGG 0.433801 3_1:+94548654 None:intergenic
AACTGTCCCCATTGCTGCTG+AGG 0.435457 3_1:-94546777 Msa0389610:CDS
TATGATATTGCTGGTACCCC+TGG 0.437304 3_1:-94548644 Msa0389610:CDS
GCCATTCTCGGTGCCGCCGG+TGG 0.439694 3_1:-94548728 Msa0389610:CDS
TTCATATACTATGCAATTGA+AGG 0.442028 3_1:-94545228 Msa0389610:three_prime_UTR
GAGGTCAATGTACCTGTTAT+AGG 0.443809 3_1:-94546386 Msa0389610:CDS
AGAATGGCCACCTTGCGTTC+AGG 0.443817 3_1:+94548743 None:intergenic
AATGGCCCTTCACTAATGTA+TGG 0.448464 3_1:-94545252 Msa0389610:three_prime_UTR
CAGGTGAGGATTGGGAAGAA+TGG 0.448697 3_1:-94545621 Msa0389610:CDS
AGATCATCACGAGTCATTCC+AGG 0.455102 3_1:+94547417 None:intergenic
ACTTCCTTTCTTTGCTTCCA+AGG 0.457724 3_1:-94545839 Msa0389610:intron
GTTATAAAATTATTAGGCTC+AGG 0.462923 3_1:-94545107 Msa0389610:three_prime_UTR
TGAAAAGGGTACCTGAGATC+TGG 0.463834 3_1:+94548592 None:intergenic
TTTGCTGATGCTTGCCTCAA+AGG 0.464611 3_1:-94545922 Msa0389610:CDS
CCCACCGGCGGCACCGAGAA+TGG 0.465990 3_1:+94548727 None:intergenic
AGCAATATCATAAAGAGAAA+GGG 0.469702 3_1:+94548655 None:intergenic
AATAGAGAGAGAGGGAGAGA+GGG 0.470931 3_1:+94548874 None:intergenic
TACAACTCTTGATGTAGTTA+GGG 0.471552 3_1:-94546708 Msa0389610:CDS
TGCTGCGGGACACGGCTGAC+TGG 0.474178 3_1:+94548798 None:intergenic
CTTGAAAACCTCAGCAGCAA+TGG 0.481837 3_1:+94546769 None:intergenic
CTTGCGTTCAGGAACCGGTT+CGG 0.485970 3_1:+94548754 None:intergenic
GTGGCCATTCTCGGTGCCGC+CGG 0.486479 3_1:-94548731 Msa0389610:CDS
AATGACATCATCATCCAGAT+TGG 0.486665 3_1:+94546206 None:intergenic
TAGTGAAGGGCCATTATGAA+TGG 0.487719 3_1:+94545260 None:intergenic
AACAAAGCCACCACCTCTGC+CGG 0.490459 3_1:+94545386 None:intergenic
CTAACATCGGCAGCAACACC+AGG 0.490641 3_1:+94548626 None:intergenic
GGGTTCCGCAACTTTGTCAA+TGG 0.490990 3_1:-94546121 Msa0389610:CDS
GGAATTACCTGAGAAAATAG+TGG 0.493703 3_1:+94546338 None:intergenic
GAACTCCATTAAGACCTTTG+AGG 0.494787 3_1:+94545908 None:intergenic
GAGGTTGTGACTGCCAAGGC+TGG 0.496598 3_1:-94546147 Msa0389610:CDS
GTAGAGGAAATTCTGGGCCT+AGG 0.496739 3_1:-94545597 Msa0389610:CDS
GCGGGTTATGCTGCGGGACA+CGG 0.500052 3_1:+94548790 None:intergenic
CCATTCTCGGTGCCGCCGGT+GGG 0.500262 3_1:-94548727 Msa0389610:CDS
CCGTGGCTATGCCACCGAAC+CGG 0.500819 3_1:-94548768 Msa0389610:CDS
TTGGTTTAGATCTTGAAAAG+TGG 0.507338 3_1:-94545129 Msa0389610:three_prime_UTR
GTATGACATGTTCGATTACT+GGG 0.508568 3_1:+94545488 None:intergenic
AAAAGAATTGTATAAGATAG+GGG 0.509027 3_1:+94544985 None:intergenic
AAAATTATTAGGCTCAGGCT+AGG 0.511423 3_1:-94545102 Msa0389610:three_prime_UTR
ATGGGGACAGTTGAGTTCAC+AGG 0.511862 3_1:+94546788 None:intergenic
TGTGACTGCCAAGGCTGGAA+AGG 0.512626 3_1:-94546142 Msa0389610:CDS
GACGTTGTTATCATTCCTGC+CGG 0.514672 3_1:-94547453 Msa0389610:CDS
GTTTGTAATGTTGCCGGCAG+AGG 0.518493 3_1:-94545399 Msa0389610:three_prime_UTR
CCTGTTATAGGAGGCCATGC+AGG 0.522625 3_1:-94546374 Msa0389610:CDS
TGAGCTTGGAAAAGCTTTGG+AGG 0.525617 3_1:-94547481 Msa0389610:CDS
GCGGGACACGGCTGACTGGA+CGG 0.527623 3_1:+94548802 None:intergenic
CCACATCAACTCCAGATCTC+AGG 0.529181 3_1:-94548603 Msa0389610:intron
TCCAGGCTTTCTGGGCACGC+CGG 0.530779 3_1:+94547434 None:intergenic
GAATAGAGAGAGAGGGAGAG+AGG 0.534057 3_1:+94548873 None:intergenic
TTCGGTGGCATAGCCACGGC+GGG 0.536741 3_1:+94548772 None:intergenic
AATGAATGAACGCTTATGCT+TGG 0.538699 3_1:+94548906 None:intergenic
ACATGTCATACATTTCTGGC+AGG 0.543317 3_1:-94545476 Msa0389610:three_prime_UTR
GAGAAAGGGTTGAAACGAGA+GGG 0.543785 3_1:+94548669 None:intergenic
GCCACGGCGGGTTATGCTGC+GGG 0.544063 3_1:+94548784 None:intergenic
ATCACCTTGGAAGCAAAGAA+AGG 0.544474 3_1:+94545835 None:intergenic
AATGTTGCCGGCAGAGGTGG+TGG 0.545920 3_1:-94545393 Msa0389610:three_prime_UTR
AGCCACGGCGGGTTATGCTG+CGG 0.546095 3_1:+94548783 None:intergenic
AATGGTGTAGAGGAAATTCT+GGG 0.547032 3_1:-94545603 Msa0389610:CDS
TGTGGACATATGTGAACTGT+TGG 0.547069 3_1:-94545041 Msa0389610:three_prime_UTR
CTTAAGTCATCTATTGAGAA+GGG 0.549740 3_1:-94545525 Msa0389610:CDS
ATGACTTAAGTTCAGACTTG+AGG 0.553442 3_1:+94545538 None:intergenic
GTGACTGCCAAGGCTGGAAA+GGG 0.554401 3_1:-94546141 Msa0389610:CDS
GAGTATCGACGGCCTCATCA+TGG 0.558205 3_1:+94548829 None:intergenic
GGAAGCTAATGTTCCAGTTG+CGG 0.569359 3_1:-94546667 Msa0389610:CDS
TCATATACTATGCAATTGAA+GGG 0.571026 3_1:-94545227 Msa0389610:three_prime_UTR
CTAACTGCGAGGACCCAAGA+TGG 0.573904 3_1:-94546177 Msa0389610:CDS
ATGAAACCATACATTAGTGA+AGG 0.574546 3_1:+94545246 None:intergenic
ACTTAAGTCATCTATTGAGA+AGG 0.574569 3_1:-94545526 Msa0389610:CDS
AAATTATTAGGCTCAGGCTA+GGG 0.575193 3_1:-94545101 Msa0389610:three_prime_UTR
TACGCAGGTGAAGATGAGCT+TGG 0.576220 3_1:-94547495 Msa0389610:CDS
CGACGAGAAGAGATTGTTTG+GGG 0.576854 3_1:-94546732 Msa0389610:CDS
TGTAATGTTGCCGGCAGAGG+TGG 0.579567 3_1:-94545396 Msa0389610:three_prime_UTR
GAGCTTCATGAGAAGAGAGA+GGG 0.580913 3_1:+94548694 None:intergenic
CTCAGGCTAGGGTGGATGAG+TGG 0.582680 3_1:-94545090 Msa0389610:three_prime_UTR
AGAGAAAGGGTTGAAACGAG+AGG 0.583003 3_1:+94548668 None:intergenic
TTATTAGGCTCAGGCTAGGG+TGG 0.584243 3_1:-94545098 Msa0389610:three_prime_UTR
CCTGAGATCTGGAGTTGATG+TGG 0.592045 3_1:+94548603 None:intergenic
GTTGATGCTTGTAAGATGCT+CGG 0.592158 3_1:-94548972 Msa0389610:five_prime_UTR
TCTTCCGAGAATAGAGAGAG+AGG 0.594398 3_1:+94548865 None:intergenic
CCGGTTCGGTGGCATAGCCA+CGG 0.595900 3_1:+94548768 None:intergenic
GCGTTCAGGAACCGGTTCGG+TGG 0.596037 3_1:+94548757 None:intergenic
GTCCACGTGGATGAGTTATG+TGG 0.599348 3_1:-94545059 Msa0389610:three_prime_UTR
GAGGGGCTGACCGATCCCAC+CGG 0.599708 3_1:+94548712 None:intergenic
TGAAACCATACATTAGTGAA+GGG 0.599809 3_1:+94545247 None:intergenic
AAGAACAGTTTATTGCTGCA+GGG 0.600875 3_1:-94545316 Msa0389610:three_prime_UTR
TTCTCGAAGCATCCATGATG+AGG 0.602920 3_1:-94548841 Msa0389610:exon
AGCTTCATGAGAAGAGAGAG+GGG 0.608885 3_1:+94548695 None:intergenic
GAATTACCTGAGAAAATAGT+GGG 0.610521 3_1:+94546339 None:intergenic
GAGCTTGGAAAAGCTTTGGA+GGG 0.610948 3_1:-94547480 Msa0389610:CDS
GATTGGGAAGAATGGTGTAG+AGG 0.619575 3_1:-94545613 Msa0389610:CDS
GTCAATGTACCTGTTATAGG+AGG 0.620105 3_1:-94546383 Msa0389610:CDS
GGAGTTGATGTGGCTAACAT+CGG 0.621832 3_1:+94548613 None:intergenic
AAGGGCCATTATGAATGGAA+AGG 0.624743 3_1:+94545265 None:intergenic
GGAGAATAGTAACTCCTGCA+TGG 0.631392 3_1:+94546360 None:intergenic
CTTCCGAGAATAGAGAGAGA+GGG 0.632882 3_1:+94548866 None:intergenic
TGAGCTTCATGAGAAGAGAG+AGG 0.635248 3_1:+94548693 None:intergenic
ATGCAGGTAACTGGGTACGC+AGG 0.635967 3_1:-94547510 Msa0389610:intron
TGGGGACAGTTGAGTTCACA+GGG 0.637936 3_1:+94546789 None:intergenic
TTACGCCATTGACAAAGTTG+CGG 0.643353 3_1:+94546116 None:intergenic
CGAACCGGTTCCTGAACGCA+AGG 0.644125 3_1:-94548753 Msa0389610:CDS
TTATGCTTGGAGAGTGACGA+TGG 0.644637 3_1:+94548919 None:intergenic
TCCCGCAGCATAACCCGCCG+TGG 0.650564 3_1:-94548785 Msa0389610:CDS
GGATGTGCATCATAAATCAG+TGG 0.654082 3_1:+94545006 None:intergenic
AGGCTAGGGTGGATGAGTGG+AGG 0.654720 3_1:-94545087 Msa0389610:three_prime_UTR
CAAAATCTGAGAGAGAACCT+AGG 0.656711 3_1:+94545580 None:intergenic
AACAGAGGTTGTGACTGCCA+AGG 0.658548 3_1:-94546151 Msa0389610:CDS
GACCCAAGATGGAGGAACAG+AGG 0.666823 3_1:-94546166 Msa0389610:CDS
TCATCATCCAGATTGGCTTG+AGG 0.669069 3_1:+94546213 None:intergenic
ACCGGTTCCTGAACGCAAGG+TGG 0.673690 3_1:-94548750 Msa0389610:CDS
TAACATCGGCAGCAACACCA+GGG 0.676039 3_1:+94548627 None:intergenic
GTTCGGTGGCATAGCCACGG+CGG 0.681583 3_1:+94548771 None:intergenic
ACTGCGAGGACCCAAGATGG+AGG 0.683500 3_1:-94546174 Msa0389610:CDS
GGGCTGACCGATCCCACCGG+CGG 0.696199 3_1:+94548715 None:intergenic
TGGACGGATCTGAGTATCGA+CGG 0.700504 3_1:+94548818 None:intergenic
GCAGTACTTAGAAATAGCAG+TGG 0.701234 3_1:+94547359 None:intergenic
AGTGGAGGAAGTCGTCCACG+TGG 0.710170 3_1:-94545072 Msa0389610:three_prime_UTR
TCATTAAGGCTCTAACTGCG+AGG 0.713351 3_1:-94546188 Msa0389610:CDS
TGAAAACCTCAGCAGCAATG+GGG 0.722319 3_1:+94546771 None:intergenic
AACATCGGCAGCAACACCAG+GGG 0.724695 3_1:+94548628 None:intergenic
TGACATGTTCGATTACTGGG+AGG 0.743122 3_1:+94545491 None:intergenic
GTCCACATAACTCATCCACG+TGG 0.769200 3_1:+94545057 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATCTAAACAATTTTTTTTAA+GGG + chr3_1:94545907-94545926 None:intergenic 10.0%
!!! AATCTAAACAATTTTTTTTA+AGG + chr3_1:94545908-94545927 None:intergenic 10.0%
!!! AATCTAAACAATTTTTTTAT+AGG - chr3_1:94546066-94546085 Msa0389610:intron 10.0%
!!! ATCTAAACAATTTTTTTATA+GGG - chr3_1:94546067-94546086 Msa0389610:intron 10.0%
!!! ATCTAAACAATTTTTTTTAA+GGG + chr3_1:94545907-94545926 None:intergenic 10.0%
!!! AATCTAAACAATTTTTTTTA+AGG + chr3_1:94545908-94545927 None:intergenic 10.0%
!!! AATCTAAACAATTTTTTTAT+AGG - chr3_1:94546066-94546085 Msa0389610:intron 10.0%
!!! ATCTAAACAATTTTTTTATA+GGG - chr3_1:94546067-94546086 Msa0389610:intron 10.0%
!!! TTTGTTGTATTTTAATGTTA+TGG - chr3_1:94545820-94545839 Msa0389610:intron 15.0%
!!! TCTAAACAATTTTTTTTAAG+GGG + chr3_1:94545906-94545925 None:intergenic 15.0%
!! TTTGTAATTTGAAAGAATTT+CGG - chr3_1:94546004-94546023 Msa0389610:intron 15.0%
!!! TCTAAACAATTTTTTTATAG+GGG - chr3_1:94546068-94546087 Msa0389610:intron 15.0%
!! GCATGATTTATTTATTATTA+TGG - chr3_1:94546268-94546287 Msa0389610:intron 15.0%
!! AAACTAAACTAAAAAAATCA+CGG + chr3_1:94546427-94546446 None:intergenic 15.0%
!! CAGATTTAATTATTAAATCT+AGG + chr3_1:94548677-94548696 None:intergenic 15.0%
!! AAAGTGGTTATAAAATTATT+AGG - chr3_1:94548901-94548920 Msa0389610:five_prime_UTR 15.0%
!!! TTTGTTGTATTTTAATGTTA+TGG - chr3_1:94545820-94545839 Msa0389610:intron 15.0%
!!! TCTAAACAATTTTTTTTAAG+GGG + chr3_1:94545906-94545925 None:intergenic 15.0%
!! TTTGTAATTTGAAAGAATTT+CGG - chr3_1:94546004-94546023 Msa0389610:intron 15.0%
!!! TCTAAACAATTTTTTTATAG+GGG - chr3_1:94546068-94546087 Msa0389610:intron 15.0%
!! GCATGATTTATTTATTATTA+TGG - chr3_1:94546268-94546287 Msa0389610:intron 15.0%
!! AAACTAAACTAAAAAAATCA+CGG + chr3_1:94546427-94546446 None:intergenic 15.0%
!! CAGATTTAATTATTAAATCT+AGG + chr3_1:94548677-94548696 None:intergenic 15.0%
!! AAAGTGGTTATAAAATTATT+AGG - chr3_1:94548901-94548920 Msa0389610:five_prime_UTR 15.0%
!! ATGATGAATCTTAATTTCAA+AGG - chr3_1:94545479-94545498 Msa0389610:three_prime_UTR 20.0%
!! TTCAATGTAATCATATATGT+TGG + chr3_1:94545692-94545711 None:intergenic 20.0%
!! ATGTTATGGTAATTAACATT+TGG - chr3_1:94545834-94545853 Msa0389610:intron 20.0%
!! TGTTATGGTAATTAACATTT+GGG - chr3_1:94545835-94545854 Msa0389610:intron 20.0%
!!! ATTTAAAGATTCTTTGGTTT+TGG - chr3_1:94545938-94545957 Msa0389610:CDS 20.0%
!! GAAATTCTTTCAAATTACAA+AGG + chr3_1:94546005-94546024 None:intergenic 20.0%
!!! TTTTTTTTCCTTTCCAATTT+TGG - chr3_1:94546475-94546494 Msa0389610:intron 20.0%
!!! ATTTAAAACCAAAATTGGAA+AGG + chr3_1:94546486-94546505 None:intergenic 20.0%
!! CACTCAATTATTAGTATTAT+TGG + chr3_1:94546964-94546983 None:intergenic 20.0%
!! CAATAATACTAATAATTGAG+TGG - chr3_1:94546962-94546981 Msa0389610:intron 20.0%
!! ATATCATGCTTAAATATAGA+AGG + chr3_1:94547105-94547124 None:intergenic 20.0%
!! TTCTATATTTAAGCATGATA+TGG - chr3_1:94547104-94547123 Msa0389610:intron 20.0%
!!! GTTTCTATTTTTACTTCTAA+TGG - chr3_1:94548231-94548250 Msa0389610:intron 20.0%
!!! TTTTTACTTCTAATGGTTTA+AGG - chr3_1:94548238-94548257 Msa0389610:intron 20.0%
!! ACAACAAGTTAAAAGAAAAT+AGG + chr3_1:94548296-94548315 None:intergenic 20.0%
!! TGAATTTGCAAAATTTGATT+CGG + chr3_1:94548587-94548606 None:intergenic 20.0%
!!! AATTAAAACCAGTTTTAGAT+TGG - chr3_1:94548726-94548745 Msa0389610:CDS 20.0%
!! AGATCTAAACCAAAATAAAA+TGG + chr3_1:94548878-94548897 None:intergenic 20.0%
!! AAAAGAATTGTATAAGATAG+GGG + chr3_1:94549032-94549051 None:intergenic 20.0%
!! GAAAAGAATTGTATAAGATA+GGG + chr3_1:94549033-94549052 None:intergenic 20.0%
!! AGAAAAGAATTGTATAAGAT+AGG + chr3_1:94549034-94549053 None:intergenic 20.0%
!! ATGATGAATCTTAATTTCAA+AGG - chr3_1:94545479-94545498 Msa0389610:three_prime_UTR 20.0%
!! TTCAATGTAATCATATATGT+TGG + chr3_1:94545692-94545711 None:intergenic 20.0%
!! ATGTTATGGTAATTAACATT+TGG - chr3_1:94545834-94545853 Msa0389610:intron 20.0%
!! TGTTATGGTAATTAACATTT+GGG - chr3_1:94545835-94545854 Msa0389610:intron 20.0%
!!! ATTTAAAGATTCTTTGGTTT+TGG - chr3_1:94545938-94545957 Msa0389610:CDS 20.0%
!! GAAATTCTTTCAAATTACAA+AGG + chr3_1:94546005-94546024 None:intergenic 20.0%
!!! TTTTTTTTCCTTTCCAATTT+TGG - chr3_1:94546475-94546494 Msa0389610:intron 20.0%
!!! ATTTAAAACCAAAATTGGAA+AGG + chr3_1:94546486-94546505 None:intergenic 20.0%
!! CACTCAATTATTAGTATTAT+TGG + chr3_1:94546964-94546983 None:intergenic 20.0%
!! CAATAATACTAATAATTGAG+TGG - chr3_1:94546962-94546981 Msa0389610:intron 20.0%
!! ATATCATGCTTAAATATAGA+AGG + chr3_1:94547105-94547124 None:intergenic 20.0%
!! TTCTATATTTAAGCATGATA+TGG - chr3_1:94547104-94547123 Msa0389610:intron 20.0%
!!! GTTTCTATTTTTACTTCTAA+TGG - chr3_1:94548231-94548250 Msa0389610:intron 20.0%
!!! TTTTTACTTCTAATGGTTTA+AGG - chr3_1:94548238-94548257 Msa0389610:intron 20.0%
!! ACAACAAGTTAAAAGAAAAT+AGG + chr3_1:94548296-94548315 None:intergenic 20.0%
!! TGAATTTGCAAAATTTGATT+CGG + chr3_1:94548587-94548606 None:intergenic 20.0%
!!! AATTAAAACCAGTTTTAGAT+TGG - chr3_1:94548726-94548745 Msa0389610:CDS 20.0%
!! AGATCTAAACCAAAATAAAA+TGG + chr3_1:94548878-94548897 None:intergenic 20.0%
!! AAAAGAATTGTATAAGATAG+GGG + chr3_1:94549032-94549051 None:intergenic 20.0%
!! GAAAAGAATTGTATAAGATA+GGG + chr3_1:94549033-94549052 None:intergenic 20.0%
!! AGAAAAGAATTGTATAAGAT+AGG + chr3_1:94549034-94549053 None:intergenic 20.0%
! ACACAAAAAGAGGAAAATTT+GGG + chr3_1:94545010-94545029 None:intergenic 25.0%
!! TTACAAGCATCAACTATTTT+GGG + chr3_1:94545036-94545055 None:intergenic 25.0%
! AGCAATATCATAAAGAGAAA+GGG + chr3_1:94545362-94545381 None:intergenic 25.0%
! TTACAATTAACCAGTGAAAA+GGG + chr3_1:94545439-94545458 None:intergenic 25.0%
! TTTACAATTAACCAGTGAAA+AGG + chr3_1:94545440-94545459 None:intergenic 25.0%
! TAATAAAAATACGCATGAGA+TGG + chr3_1:94545594-94545613 None:intergenic 25.0%
!! TGATTTTCTTAAATGATCAG+CGG - chr3_1:94545717-94545736 Msa0389610:intron 25.0%
! AAACTTATGAAACATGGATA+TGG + chr3_1:94545782-94545801 None:intergenic 25.0%
! TCGTTAAAACTTATGAAACA+TGG + chr3_1:94545788-94545807 None:intergenic 25.0%
!!! ATTTTTTTTAAGGGGTACAT+CGG + chr3_1:94545898-94545917 None:intergenic 25.0%
! TTTGTAATTTGATGTCATGA+AGG + chr3_1:94545965-94545984 None:intergenic 25.0%
! AATTTGAAGATTCTTTGACA+GGG + chr3_1:94546036-94546055 None:intergenic 25.0%
! TAATTTGAAGATTCTTTGAC+AGG + chr3_1:94546037-94546056 None:intergenic 25.0%
!!! ATTTTTTTATAGGGGTAAAC+CGG - chr3_1:94546076-94546095 Msa0389610:intron 25.0%
!!! AGTGAACTGCAATTTTTTAT+AGG - chr3_1:94546159-94546178 Msa0389610:CDS 25.0%
!!! GTGAACTGCAATTTTTTATA+GGG - chr3_1:94546160-94546179 Msa0389610:CDS 25.0%
!!! TGAACTGCAATTTTTTATAG+GGG - chr3_1:94546161-94546180 Msa0389610:CDS 25.0%
!!! AATTTTTTATAGGGGTAAAC+CGG - chr3_1:94546169-94546188 Msa0389610:CDS 25.0%
!! CAATTCAGTGATGTTTATTT+TGG - chr3_1:94546750-94546769 Msa0389610:CDS 25.0%
! TGAGTGAATTTCATTACAAT+TGG - chr3_1:94546824-94546843 Msa0389610:intron 25.0%
!! TAATTTTCTTAAACTTACCC+TGG - chr3_1:94546859-94546878 Msa0389610:intron 25.0%
! ATAATTGAGTGGCATATTAT+TGG - chr3_1:94546973-94546992 Msa0389610:intron 25.0%
!! TTTACATCCATTAAAAGTGT+AGG - chr3_1:94547000-94547019 Msa0389610:intron 25.0%
!! AGGATTTGAGATTTATAAGT+TGG - chr3_1:94547020-94547039 Msa0389610:intron 25.0%
! ACTTCTTTAAATATGGAATC+AGG - chr3_1:94547180-94547199 Msa0389610:intron 25.0%
! AGTTATGTTCAACTTTCTTT+GGG + chr3_1:94547480-94547499 None:intergenic 25.0%
!! TTGTAATTGCATGAAGATTT+TGG - chr3_1:94547545-94547564 Msa0389610:intron 25.0%
! ATGTACAACTAATAGCAAAT+TGG + chr3_1:94547589-94547608 None:intergenic 25.0%
! ATACGAAAGAATAAAACAAC+TGG + chr3_1:94548349-94548368 None:intergenic 25.0%
!! AAACTGTTGAAATGTTTTAC+AGG - chr3_1:94548374-94548393 Msa0389610:intron 25.0%
!!! AAATTTGATTCGGTTCTAAA+TGG + chr3_1:94548577-94548596 None:intergenic 25.0%
!!! TTTGTTGTTTTATTTAGAGC+AGG - chr3_1:94548645-94548664 Msa0389610:CDS 25.0%
! TTCATATACTATGCAATTGA+AGG - chr3_1:94548786-94548805 Msa0389610:CDS 25.0%
! TCATATACTATGCAATTGAA+GGG - chr3_1:94548787-94548806 Msa0389610:CDS 25.0%
!!! CATATCGATCCATTTTATTT+TGG - chr3_1:94548866-94548885 Msa0389610:five_prime_UTR 25.0%
! GTTATAAAATTATTAGGCTC+AGG - chr3_1:94548907-94548926 Msa0389610:five_prime_UTR 25.0%
! ACACAAAAAGAGGAAAATTT+GGG + chr3_1:94545010-94545029 None:intergenic 25.0%
!! TTACAAGCATCAACTATTTT+GGG + chr3_1:94545036-94545055 None:intergenic 25.0%
! AGCAATATCATAAAGAGAAA+GGG + chr3_1:94545362-94545381 None:intergenic 25.0%
! TTACAATTAACCAGTGAAAA+GGG + chr3_1:94545439-94545458 None:intergenic 25.0%
! TTTACAATTAACCAGTGAAA+AGG + chr3_1:94545440-94545459 None:intergenic 25.0%
! TAATAAAAATACGCATGAGA+TGG + chr3_1:94545594-94545613 None:intergenic 25.0%
!! TGATTTTCTTAAATGATCAG+CGG - chr3_1:94545717-94545736 Msa0389610:intron 25.0%
! AAACTTATGAAACATGGATA+TGG + chr3_1:94545782-94545801 None:intergenic 25.0%
! TCGTTAAAACTTATGAAACA+TGG + chr3_1:94545788-94545807 None:intergenic 25.0%
!!! ATTTTTTTTAAGGGGTACAT+CGG + chr3_1:94545898-94545917 None:intergenic 25.0%
! TTTGTAATTTGATGTCATGA+AGG + chr3_1:94545965-94545984 None:intergenic 25.0%
! AATTTGAAGATTCTTTGACA+GGG + chr3_1:94546036-94546055 None:intergenic 25.0%
! TAATTTGAAGATTCTTTGAC+AGG + chr3_1:94546037-94546056 None:intergenic 25.0%
!!! ATTTTTTTATAGGGGTAAAC+CGG - chr3_1:94546076-94546095 Msa0389610:intron 25.0%
!!! AGTGAACTGCAATTTTTTAT+AGG - chr3_1:94546159-94546178 Msa0389610:CDS 25.0%
!!! GTGAACTGCAATTTTTTATA+GGG - chr3_1:94546160-94546179 Msa0389610:CDS 25.0%
!!! TGAACTGCAATTTTTTATAG+GGG - chr3_1:94546161-94546180 Msa0389610:CDS 25.0%
!!! AATTTTTTATAGGGGTAAAC+CGG - chr3_1:94546169-94546188 Msa0389610:CDS 25.0%
!! CAATTCAGTGATGTTTATTT+TGG - chr3_1:94546750-94546769 Msa0389610:CDS 25.0%
! TGAGTGAATTTCATTACAAT+TGG - chr3_1:94546824-94546843 Msa0389610:intron 25.0%
!! TAATTTTCTTAAACTTACCC+TGG - chr3_1:94546859-94546878 Msa0389610:intron 25.0%
! ATAATTGAGTGGCATATTAT+TGG - chr3_1:94546973-94546992 Msa0389610:intron 25.0%
!! TTTACATCCATTAAAAGTGT+AGG - chr3_1:94547000-94547019 Msa0389610:intron 25.0%
!! AGGATTTGAGATTTATAAGT+TGG - chr3_1:94547020-94547039 Msa0389610:intron 25.0%
! ACTTCTTTAAATATGGAATC+AGG - chr3_1:94547180-94547199 Msa0389610:intron 25.0%
! AGTTATGTTCAACTTTCTTT+GGG + chr3_1:94547480-94547499 None:intergenic 25.0%
!! TTGTAATTGCATGAAGATTT+TGG - chr3_1:94547545-94547564 Msa0389610:intron 25.0%
! ATGTACAACTAATAGCAAAT+TGG + chr3_1:94547589-94547608 None:intergenic 25.0%
! ATACGAAAGAATAAAACAAC+TGG + chr3_1:94548349-94548368 None:intergenic 25.0%
!! AAACTGTTGAAATGTTTTAC+AGG - chr3_1:94548374-94548393 Msa0389610:intron 25.0%
!!! AAATTTGATTCGGTTCTAAA+TGG + chr3_1:94548577-94548596 None:intergenic 25.0%
!!! TTTGTTGTTTTATTTAGAGC+AGG - chr3_1:94548645-94548664 Msa0389610:CDS 25.0%
! TTCATATACTATGCAATTGA+AGG - chr3_1:94548786-94548805 Msa0389610:CDS 25.0%
! TCATATACTATGCAATTGAA+GGG - chr3_1:94548787-94548806 Msa0389610:CDS 25.0%
!!! CATATCGATCCATTTTATTT+TGG - chr3_1:94548866-94548885 Msa0389610:five_prime_UTR 25.0%
! GTTATAAAATTATTAGGCTC+AGG - chr3_1:94548907-94548926 Msa0389610:five_prime_UTR 25.0%
CACAAAAAGAGGAAAATTTG+GGG + chr3_1:94545009-94545028 None:intergenic 30.0%
CACACAAAAAGAGGAAAATT+TGG + chr3_1:94545011-94545030 None:intergenic 30.0%
! CAAATTTTCCTCTTTTTGTG+TGG - chr3_1:94545009-94545028 Msa0389610:three_prime_UTR 30.0%
! CTTACAAGCATCAACTATTT+TGG + chr3_1:94545037-94545056 None:intergenic 30.0%
AATCTCTACTCGCAATAAAT+TGG - chr3_1:94545070-94545089 Msa0389610:three_prime_UTR 30.0%
CAGCAATATCATAAAGAGAA+AGG + chr3_1:94545363-94545382 None:intergenic 30.0%
CTTTCTCTTTATGATATTGC+TGG - chr3_1:94545361-94545380 Msa0389610:three_prime_UTR 30.0%
!! ACTTTACTTGTGCTGTTTAT+TGG - chr3_1:94545507-94545526 Msa0389610:CDS 30.0%
!! CTTTACTTGTGCTGTTTATT+GGG - chr3_1:94545508-94545527 Msa0389610:CDS 30.0%
AGAATCTTTAAATCACAGGT+TGG + chr3_1:94545931-94545950 None:intergenic 30.0%
CCAAAGAATCTTTAAATCAC+AGG + chr3_1:94545935-94545954 None:intergenic 30.0%
CCTGTGATTTAAAGATTCTT+TGG - chr3_1:94545932-94545951 Msa0389610:CDS 30.0%
ATTTGAAGATTCTTTGACAG+GGG + chr3_1:94546035-94546054 None:intergenic 30.0%
GAATCTTCAAATTACAGTGT+TGG - chr3_1:94546043-94546062 Msa0389610:intron 30.0%
! CATGTAATATTGGTGATTTC+CGG + chr3_1:94546098-94546117 None:intergenic 30.0%
GGAAATCACCAATATTACAT+GGG - chr3_1:94546097-94546116 Msa0389610:intron 30.0%
!!! TTAACCCTTAACCTTTTTTG+TGG - chr3_1:94546133-94546152 Msa0389610:CDS 30.0%
!!! TAACCCTTAACCTTTTTTGT+GGG - chr3_1:94546134-94546153 Msa0389610:CDS 30.0%
! CATGTAATATTGGTGATTTC+CGG + chr3_1:94546098-94546117 None:intergenic 30.0%
GGAAATCACCAATATTACAT+GGG - chr3_1:94546097-94546116 Msa0389610:intron 30.0%
! TTAACCCTTAACCTTATTTG+TGG - chr3_1:94546226-94546245 Msa0389610:intron 30.0%
! TAACCCTTAACCTTATTTGT+GGG - chr3_1:94546227-94546246 Msa0389610:intron 30.0%
!!! CATTTGATTTTAGAACACGA+AGG - chr3_1:94546294-94546313 Msa0389610:intron 30.0%
! CCTGCATTTAAAACCAAAAT+TGG + chr3_1:94546491-94546510 None:intergenic 30.0%
!!! CCAATTTTGGTTTTAAATGC+AGG - chr3_1:94546488-94546507 Msa0389610:intron 30.0%
! CTCAAATCCTACACTTTTAA+TGG + chr3_1:94547010-94547029 None:intergenic 30.0%
GCTGAGTACTTCTTTAAATA+TGG - chr3_1:94547173-94547192 Msa0389610:intron 30.0%
TTACAACTCTTGATGTAGTT+AGG - chr3_1:94547305-94547324 Msa0389610:intron 30.0%
TACAACTCTTGATGTAGTTA+GGG - chr3_1:94547306-94547325 Msa0389610:intron 30.0%
AAACATGAGGATTTGAGTAT+TGG - chr3_1:94547432-94547451 Msa0389610:CDS 30.0%
CAGTTATGTTCAACTTTCTT+TGG + chr3_1:94547481-94547500 None:intergenic 30.0%
!! AACATTTGATTTTTCTGCAG+AGG - chr3_1:94547609-94547628 Msa0389610:intron 30.0%
GAATTACCTGAGAAAATAGT+GGG + chr3_1:94547678-94547697 None:intergenic 30.0%
AAAATGCAAGTTAAAGAGCA+GGG + chr3_1:94547700-94547719 None:intergenic 30.0%
! CGTACTTCTAACATGTATTT+TGG - chr3_1:94547720-94547739 Msa0389610:intron 30.0%
TCTTAACTGTTCTCTTGTAT+AGG - chr3_1:94547773-94547792 Msa0389610:intron 30.0%
ACTACAAGAATTATGATTCC+TGG - chr3_1:94548005-94548024 Msa0389610:intron 30.0%
CTACAAGAATTATGATTCCT+GGG - chr3_1:94548006-94548025 Msa0389610:intron 30.0%
!! ACTTGTTGTGTTCATAGAAA+CGG - chr3_1:94548307-94548326 Msa0389610:intron 30.0%
ACTTAAGTCATCTATTGAGA+AGG - chr3_1:94548488-94548507 Msa0389610:intron 30.0%
CTTAAGTCATCTATTGAGAA+GGG - chr3_1:94548489-94548508 Msa0389610:intron 30.0%
ACAATTGTTTGTAATGTTGC+CGG - chr3_1:94548609-94548628 Msa0389610:CDS 30.0%
TGAAACCATACATTAGTGAA+GGG + chr3_1:94548770-94548789 None:intergenic 30.0%
ATGAAACCATACATTAGTGA+AGG + chr3_1:94548771-94548790 None:intergenic 30.0%
TTGGTTTAGATCTTGAAAAG+TGG - chr3_1:94548885-94548904 Msa0389610:five_prime_UTR 30.0%
CACAAAAAGAGGAAAATTTG+GGG + chr3_1:94545009-94545028 None:intergenic 30.0%
CACACAAAAAGAGGAAAATT+TGG + chr3_1:94545011-94545030 None:intergenic 30.0%
! CAAATTTTCCTCTTTTTGTG+TGG - chr3_1:94545009-94545028 Msa0389610:three_prime_UTR 30.0%
! CTTACAAGCATCAACTATTT+TGG + chr3_1:94545037-94545056 None:intergenic 30.0%
AATCTCTACTCGCAATAAAT+TGG - chr3_1:94545070-94545089 Msa0389610:three_prime_UTR 30.0%
CAGCAATATCATAAAGAGAA+AGG + chr3_1:94545363-94545382 None:intergenic 30.0%
CTTTCTCTTTATGATATTGC+TGG - chr3_1:94545361-94545380 Msa0389610:three_prime_UTR 30.0%
!! ACTTTACTTGTGCTGTTTAT+TGG - chr3_1:94545507-94545526 Msa0389610:CDS 30.0%
!! CTTTACTTGTGCTGTTTATT+GGG - chr3_1:94545508-94545527 Msa0389610:CDS 30.0%
AGAATCTTTAAATCACAGGT+TGG + chr3_1:94545931-94545950 None:intergenic 30.0%
CCAAAGAATCTTTAAATCAC+AGG + chr3_1:94545935-94545954 None:intergenic 30.0%
CCTGTGATTTAAAGATTCTT+TGG - chr3_1:94545932-94545951 Msa0389610:CDS 30.0%
ATTTGAAGATTCTTTGACAG+GGG + chr3_1:94546035-94546054 None:intergenic 30.0%
GAATCTTCAAATTACAGTGT+TGG - chr3_1:94546043-94546062 Msa0389610:intron 30.0%
! CATGTAATATTGGTGATTTC+CGG + chr3_1:94546098-94546117 None:intergenic 30.0%
GGAAATCACCAATATTACAT+GGG - chr3_1:94546097-94546116 Msa0389610:intron 30.0%
!!! TTAACCCTTAACCTTTTTTG+TGG - chr3_1:94546133-94546152 Msa0389610:CDS 30.0%
!!! TAACCCTTAACCTTTTTTGT+GGG - chr3_1:94546134-94546153 Msa0389610:CDS 30.0%
! CATGTAATATTGGTGATTTC+CGG + chr3_1:94546098-94546117 None:intergenic 30.0%
GGAAATCACCAATATTACAT+GGG - chr3_1:94546097-94546116 Msa0389610:intron 30.0%
! TTAACCCTTAACCTTATTTG+TGG - chr3_1:94546226-94546245 Msa0389610:intron 30.0%
! TAACCCTTAACCTTATTTGT+GGG - chr3_1:94546227-94546246 Msa0389610:intron 30.0%
!!! CATTTGATTTTAGAACACGA+AGG - chr3_1:94546294-94546313 Msa0389610:intron 30.0%
! CCTGCATTTAAAACCAAAAT+TGG + chr3_1:94546491-94546510 None:intergenic 30.0%
!!! CCAATTTTGGTTTTAAATGC+AGG - chr3_1:94546488-94546507 Msa0389610:intron 30.0%
! CTCAAATCCTACACTTTTAA+TGG + chr3_1:94547010-94547029 None:intergenic 30.0%
GCTGAGTACTTCTTTAAATA+TGG - chr3_1:94547173-94547192 Msa0389610:intron 30.0%
TTACAACTCTTGATGTAGTT+AGG - chr3_1:94547305-94547324 Msa0389610:intron 30.0%
TACAACTCTTGATGTAGTTA+GGG - chr3_1:94547306-94547325 Msa0389610:intron 30.0%
AAACATGAGGATTTGAGTAT+TGG - chr3_1:94547432-94547451 Msa0389610:CDS 30.0%
CAGTTATGTTCAACTTTCTT+TGG + chr3_1:94547481-94547500 None:intergenic 30.0%
!! AACATTTGATTTTTCTGCAG+AGG - chr3_1:94547609-94547628 Msa0389610:intron 30.0%
GAATTACCTGAGAAAATAGT+GGG + chr3_1:94547678-94547697 None:intergenic 30.0%
AAAATGCAAGTTAAAGAGCA+GGG + chr3_1:94547700-94547719 None:intergenic 30.0%
! CGTACTTCTAACATGTATTT+TGG - chr3_1:94547720-94547739 Msa0389610:intron 30.0%
TCTTAACTGTTCTCTTGTAT+AGG - chr3_1:94547773-94547792 Msa0389610:intron 30.0%
ACTACAAGAATTATGATTCC+TGG - chr3_1:94548005-94548024 Msa0389610:intron 30.0%
CTACAAGAATTATGATTCCT+GGG - chr3_1:94548006-94548025 Msa0389610:intron 30.0%
!! ACTTGTTGTGTTCATAGAAA+CGG - chr3_1:94548307-94548326 Msa0389610:intron 30.0%
ACTTAAGTCATCTATTGAGA+AGG - chr3_1:94548488-94548507 Msa0389610:intron 30.0%
CTTAAGTCATCTATTGAGAA+GGG - chr3_1:94548489-94548508 Msa0389610:intron 30.0%
ACAATTGTTTGTAATGTTGC+CGG - chr3_1:94548609-94548628 Msa0389610:CDS 30.0%
TGAAACCATACATTAGTGAA+GGG + chr3_1:94548770-94548789 None:intergenic 30.0%
ATGAAACCATACATTAGTGA+AGG + chr3_1:94548771-94548790 None:intergenic 30.0%
TTGGTTTAGATCTTGAAAAG+TGG - chr3_1:94548885-94548904 Msa0389610:five_prime_UTR 30.0%
AATGAATGAACGCTTATGCT+TGG + chr3_1:94545111-94545130 None:intergenic 35.0%
TGTGAGAGATCGGAATTAAT+CGG - chr3_1:94545538-94545557 Msa0389610:CDS 35.0%
GAAATCGCTCATATTATAGG+GGG + chr3_1:94545876-94545895 None:intergenic 35.0%
GGAAATCGCTCATATTATAG+GGG + chr3_1:94545877-94545896 None:intergenic 35.0%
CGGAAATCGCTCATATTATA+GGG + chr3_1:94545878-94545897 None:intergenic 35.0%
TCGGAAATCGCTCATATTAT+AGG + chr3_1:94545879-94545898 None:intergenic 35.0%
TTTGAAGATTCTTTGACAGG+GGG + chr3_1:94546034-94546053 None:intergenic 35.0%
CGGAAATCACCAATATTACA+TGG - chr3_1:94546096-94546115 Msa0389610:intron 35.0%
AATCACCAATATTACATGGG+AGG - chr3_1:94546100-94546119 Msa0389610:intron 35.0%
GTTTACCTCCCATGTAATAT+TGG + chr3_1:94546108-94546127 None:intergenic 35.0%
!!! AACCCTTAACCTTTTTTGTG+GGG - chr3_1:94546135-94546154 Msa0389610:CDS 35.0%
CGGAAATCACCAATATTACA+TGG - chr3_1:94546096-94546115 Msa0389610:intron 35.0%
AATCACCAATATTACATGGG+AGG - chr3_1:94546100-94546119 Msa0389610:intron 35.0%
GTTTACCTCCCATGTAATAT+TGG + chr3_1:94546108-94546127 None:intergenic 35.0%
! AACCCTTAACCTTATTTGTG+GGG - chr3_1:94546228-94546247 Msa0389610:intron 35.0%
!!! ACACGAAGGTACTCTTTTAT+TGG - chr3_1:94546308-94546327 Msa0389610:intron 35.0%
!!! TGGTTTTAAATGCAGGTAAC+TGG - chr3_1:94546495-94546514 Msa0389610:intron 35.0%
!!! GGTTTTAAATGCAGGTAACT+GGG - chr3_1:94546496-94546515 Msa0389610:intron 35.0%
! GATCTTTTCAACATTAACGC+TGG - chr3_1:94546615-94546634 Msa0389610:intron 35.0%
! TGTACTAGCTTATGCAATGA+AGG - chr3_1:94546798-94546817 Msa0389610:CDS 35.0%
TTTCCTTAAGACGAAACATG+AGG - chr3_1:94547419-94547438 Msa0389610:CDS 35.0%
AATCCTCATGTTTCGTCTTA+AGG + chr3_1:94547425-94547444 None:intergenic 35.0%
!!! TGTTTTTTCTCGAGCAAGAA+CGG - chr3_1:94547504-94547523 Msa0389610:CDS 35.0%
! TATTCTCCCACTATTTTCTC+AGG - chr3_1:94547669-94547688 Msa0389610:intron 35.0%
GGAATTACCTGAGAAAATAG+TGG + chr3_1:94547679-94547698 None:intergenic 35.0%
GAAAATGCAAGTTAAAGAGC+AGG + chr3_1:94547701-94547720 None:intergenic 35.0%
AATGACATCATCATCCAGAT+TGG + chr3_1:94547811-94547830 None:intergenic 35.0%
! TCTGGATGATGATGTCATTA+AGG - chr3_1:94547812-94547831 Msa0389610:intron 35.0%
TGATTTAGCCATGTTGATAC+TGG - chr3_1:94547925-94547944 Msa0389610:intron 35.0%
!! GTTCATTCTCTTGTTGTTTG+TGG - chr3_1:94548260-94548279 Msa0389610:intron 35.0%
!! TTGTTGTTTGTGGATGCATA+GGG - chr3_1:94548270-94548289 Msa0389610:intron 35.0%
CGAAAGAATAAAACAACTGG+TGG + chr3_1:94548346-94548365 None:intergenic 35.0%
! GTTGAAATGTTTTACAGGTG+AGG - chr3_1:94548379-94548398 Msa0389610:intron 35.0%
! AATGTTTTACAGGTGAGGAT+TGG - chr3_1:94548384-94548403 Msa0389610:intron 35.0%
! ATGTTTTACAGGTGAGGATT+GGG - chr3_1:94548385-94548404 Msa0389610:intron 35.0%
AATGGTGTAGAGGAAATTCT+GGG - chr3_1:94548411-94548430 Msa0389610:intron 35.0%
!! CTCTCAGATTTTGAGAAACA+AGG - chr3_1:94548444-94548463 Msa0389610:intron 35.0%
ATGACTTAAGTTCAGACTTG+AGG + chr3_1:94548479-94548498 None:intergenic 35.0%
GTATGACATGTTCGATTACT+GGG + chr3_1:94548529-94548548 None:intergenic 35.0%
TGTATGACATGTTCGATTAC+TGG + chr3_1:94548530-94548549 None:intergenic 35.0%
TCGAACATGTCATACATTTC+TGG - chr3_1:94548534-94548553 Msa0389610:intron 35.0%
AAGAACAGTTTATTGCTGCA+GGG - chr3_1:94548698-94548717 Msa0389610:CDS 35.0%
!! ATTGGCCTTTCCATTCATAA+TGG - chr3_1:94548744-94548763 Msa0389610:CDS 35.0%
AAAATTATTAGGCTCAGGCT+AGG - chr3_1:94548912-94548931 Msa0389610:five_prime_UTR 35.0%
AAATTATTAGGCTCAGGCTA+GGG - chr3_1:94548913-94548932 Msa0389610:five_prime_UTR 35.0%
AATGAATGAACGCTTATGCT+TGG + chr3_1:94545111-94545130 None:intergenic 35.0%
TGTGAGAGATCGGAATTAAT+CGG - chr3_1:94545538-94545557 Msa0389610:CDS 35.0%
GAAATCGCTCATATTATAGG+GGG + chr3_1:94545876-94545895 None:intergenic 35.0%
GGAAATCGCTCATATTATAG+GGG + chr3_1:94545877-94545896 None:intergenic 35.0%
CGGAAATCGCTCATATTATA+GGG + chr3_1:94545878-94545897 None:intergenic 35.0%
TCGGAAATCGCTCATATTAT+AGG + chr3_1:94545879-94545898 None:intergenic 35.0%
TTTGAAGATTCTTTGACAGG+GGG + chr3_1:94546034-94546053 None:intergenic 35.0%
CGGAAATCACCAATATTACA+TGG - chr3_1:94546096-94546115 Msa0389610:intron 35.0%
AATCACCAATATTACATGGG+AGG - chr3_1:94546100-94546119 Msa0389610:intron 35.0%
GTTTACCTCCCATGTAATAT+TGG + chr3_1:94546108-94546127 None:intergenic 35.0%
!!! AACCCTTAACCTTTTTTGTG+GGG - chr3_1:94546135-94546154 Msa0389610:CDS 35.0%
CGGAAATCACCAATATTACA+TGG - chr3_1:94546096-94546115 Msa0389610:intron 35.0%
AATCACCAATATTACATGGG+AGG - chr3_1:94546100-94546119 Msa0389610:intron 35.0%
GTTTACCTCCCATGTAATAT+TGG + chr3_1:94546108-94546127 None:intergenic 35.0%
! AACCCTTAACCTTATTTGTG+GGG - chr3_1:94546228-94546247 Msa0389610:intron 35.0%
!!! ACACGAAGGTACTCTTTTAT+TGG - chr3_1:94546308-94546327 Msa0389610:intron 35.0%
!!! TGGTTTTAAATGCAGGTAAC+TGG - chr3_1:94546495-94546514 Msa0389610:intron 35.0%
!!! GGTTTTAAATGCAGGTAACT+GGG - chr3_1:94546496-94546515 Msa0389610:intron 35.0%
! GATCTTTTCAACATTAACGC+TGG - chr3_1:94546615-94546634 Msa0389610:intron 35.0%
! TGTACTAGCTTATGCAATGA+AGG - chr3_1:94546798-94546817 Msa0389610:CDS 35.0%
TTTCCTTAAGACGAAACATG+AGG - chr3_1:94547419-94547438 Msa0389610:CDS 35.0%
AATCCTCATGTTTCGTCTTA+AGG + chr3_1:94547425-94547444 None:intergenic 35.0%
!!! TGTTTTTTCTCGAGCAAGAA+CGG - chr3_1:94547504-94547523 Msa0389610:CDS 35.0%
! TATTCTCCCACTATTTTCTC+AGG - chr3_1:94547669-94547688 Msa0389610:intron 35.0%
GGAATTACCTGAGAAAATAG+TGG + chr3_1:94547679-94547698 None:intergenic 35.0%
GAAAATGCAAGTTAAAGAGC+AGG + chr3_1:94547701-94547720 None:intergenic 35.0%
AATGACATCATCATCCAGAT+TGG + chr3_1:94547811-94547830 None:intergenic 35.0%
! TCTGGATGATGATGTCATTA+AGG - chr3_1:94547812-94547831 Msa0389610:intron 35.0%
TGATTTAGCCATGTTGATAC+TGG - chr3_1:94547925-94547944 Msa0389610:intron 35.0%
!! GTTCATTCTCTTGTTGTTTG+TGG - chr3_1:94548260-94548279 Msa0389610:intron 35.0%
!! TTGTTGTTTGTGGATGCATA+GGG - chr3_1:94548270-94548289 Msa0389610:intron 35.0%
CGAAAGAATAAAACAACTGG+TGG + chr3_1:94548346-94548365 None:intergenic 35.0%
! GTTGAAATGTTTTACAGGTG+AGG - chr3_1:94548379-94548398 Msa0389610:intron 35.0%
! AATGTTTTACAGGTGAGGAT+TGG - chr3_1:94548384-94548403 Msa0389610:intron 35.0%
! ATGTTTTACAGGTGAGGATT+GGG - chr3_1:94548385-94548404 Msa0389610:intron 35.0%
AATGGTGTAGAGGAAATTCT+GGG - chr3_1:94548411-94548430 Msa0389610:intron 35.0%
!! CTCTCAGATTTTGAGAAACA+AGG - chr3_1:94548444-94548463 Msa0389610:intron 35.0%
ATGACTTAAGTTCAGACTTG+AGG + chr3_1:94548479-94548498 None:intergenic 35.0%
GTATGACATGTTCGATTACT+GGG + chr3_1:94548529-94548548 None:intergenic 35.0%
TGTATGACATGTTCGATTAC+TGG + chr3_1:94548530-94548549 None:intergenic 35.0%
TCGAACATGTCATACATTTC+TGG - chr3_1:94548534-94548553 Msa0389610:intron 35.0%
AAGAACAGTTTATTGCTGCA+GGG - chr3_1:94548698-94548717 Msa0389610:CDS 35.0%
!! ATTGGCCTTTCCATTCATAA+TGG - chr3_1:94548744-94548763 Msa0389610:CDS 35.0%
AAAATTATTAGGCTCAGGCT+AGG - chr3_1:94548912-94548931 Msa0389610:five_prime_UTR 35.0%
AAATTATTAGGCTCAGGCTA+GGG - chr3_1:94548913-94548932 Msa0389610:five_prime_UTR 35.0%
!! TTTTGGGTCCACACAAAAAG+AGG + chr3_1:94545020-94545039 None:intergenic 40.0%
GTTGATGCTTGTAAGATGCT+CGG - chr3_1:94545042-94545061 Msa0389610:three_prime_UTR 40.0%
GGGTTATTCTTGTGAGAGAT+CGG - chr3_1:94545528-94545547 Msa0389610:CDS 40.0%
TCTTAAATGATCAGCGGTGT+CGG - chr3_1:94545723-94545742 Msa0389610:intron 40.0%
!!! ACCCTTAACCTTTTTTGTGG+GGG - chr3_1:94546136-94546155 Msa0389610:CDS 40.0%
TCCCCCACAAAAAAGGTTAA+GGG + chr3_1:94546140-94546159 None:intergenic 40.0%
! ACCCTTAACCTTATTTGTGG+GGG - chr3_1:94546229-94546248 Msa0389610:intron 40.0%
TCCCCCACAAATAAGGTTAA+GGG + chr3_1:94546233-94546252 None:intergenic 40.0%
AGTTTACTCCCCCACAAATA+AGG + chr3_1:94546240-94546259 None:intergenic 40.0%
AAAATCACGGCATTGCTGAA+GGG + chr3_1:94546414-94546433 None:intergenic 40.0%
AAAAATCACGGCATTGCTGA+AGG + chr3_1:94546415-94546434 None:intergenic 40.0%
! TGTTGTTGAGCTGTTGATTG+AGG - chr3_1:94546449-94546468 Msa0389610:intron 40.0%
AGATGAGCTTGGAAAAGCTT+TGG - chr3_1:94546530-94546549 Msa0389610:intron 40.0%
GCAGTACTTAGAAATAGCAG+TGG + chr3_1:94546658-94546677 None:intergenic 40.0%
ACGAAAACAGAGACTCACAT+GGG + chr3_1:94546682-94546701 None:intergenic 40.0%
AACGAAAACAGAGACTCACA+TGG + chr3_1:94546683-94546702 None:intergenic 40.0%
CCAGTCTAAGAGTAAATCCA+GGG + chr3_1:94546879-94546898 None:intergenic 40.0%
ACCAGTCTAAGAGTAAATCC+AGG + chr3_1:94546880-94546899 None:intergenic 40.0%
TTGAAAACCTCAGCAGCAAT+GGG + chr3_1:94547247-94547266 None:intergenic 40.0%
TACGACGAGAAGAGATTGTT+TGG - chr3_1:94547280-94547299 Msa0389610:intron 40.0%
ACGACGAGAAGAGATTGTTT+GGG - chr3_1:94547281-94547300 Msa0389610:intron 40.0%
AGGGCAAAAACTTTCTATGC+TGG - chr3_1:94547325-94547344 Msa0389610:intron 40.0%
GGGCAAAAACTTTCTATGCT+GGG - chr3_1:94547326-94547345 Msa0389610:intron 40.0%
!!! GTTTTTTCTCGAGCAAGAAC+GGG - chr3_1:94547505-94547524 Msa0389610:CDS 40.0%
!!! TTTTTTCTCGAGCAAGAACG+GGG - chr3_1:94547506-94547525 Msa0389610:CDS 40.0%
GAGGTCAATGTACCTGTTAT+AGG - chr3_1:94547628-94547647 Msa0389610:intron 40.0%
GTCAATGTACCTGTTATAGG+AGG - chr3_1:94547631-94547650 Msa0389610:intron 40.0%
TTACGCCATTGACAAAGTTG+CGG + chr3_1:94547901-94547920 None:intergenic 40.0%
CATGTTTCTTGCAGTTATGC+TGG - chr3_1:94548062-94548081 Msa0389610:intron 40.0%
GAACTCCATTAAGACCTTTG+AGG + chr3_1:94548109-94548128 None:intergenic 40.0%
AGGAAGTTCAGCAATGAGAT+TGG + chr3_1:94548162-94548181 None:intergenic 40.0%
ACTTCCTTTCTTTGCTTCCA+AGG - chr3_1:94548175-94548194 Msa0389610:intron 40.0%
ATCACCTTGGAAGCAAAGAA+AGG + chr3_1:94548182-94548201 None:intergenic 40.0%
!! CTTGTTGTTTGTGGATGCAT+AGG - chr3_1:94548269-94548288 Msa0389610:intron 40.0%
GAATGGTGTAGAGGAAATTC+TGG - chr3_1:94548410-94548429 Msa0389610:intron 40.0%
CAAAATCTGAGAGAGAACCT+AGG + chr3_1:94548437-94548456 None:intergenic 40.0%
! GTTCAGACTTGAGGTTTTCA+AGG + chr3_1:94548470-94548489 None:intergenic 40.0%
!! ACATGTCATACATTTCTGGC+AGG - chr3_1:94548538-94548557 Msa0389610:intron 40.0%
!! ATACATTTCTGGCAGGTTAC+TGG - chr3_1:94548545-94548564 Msa0389610:intron 40.0%
CAAGAACAGTTTATTGCTGC+AGG - chr3_1:94548697-94548716 Msa0389610:CDS 40.0%
! TGGAAAGGCCAATCTAAAAC+TGG + chr3_1:94548737-94548756 None:intergenic 40.0%
AAGGGCCATTATGAATGGAA+AGG + chr3_1:94548752-94548771 None:intergenic 40.0%
TAGTGAAGGGCCATTATGAA+TGG + chr3_1:94548757-94548776 None:intergenic 40.0%
AATGGCCCTTCACTAATGTA+TGG - chr3_1:94548762-94548781 Msa0389610:CDS 40.0%
TGTGGACATATGTGAACTGT+TGG - chr3_1:94548973-94548992 Msa0389610:five_prime_UTR 40.0%
GGATGTGCATCATAAATCAG+TGG + chr3_1:94549011-94549030 None:intergenic 40.0%
!! TTTTGGGTCCACACAAAAAG+AGG + chr3_1:94545020-94545039 None:intergenic 40.0%
GTTGATGCTTGTAAGATGCT+CGG - chr3_1:94545042-94545061 Msa0389610:three_prime_UTR 40.0%
GGGTTATTCTTGTGAGAGAT+CGG - chr3_1:94545528-94545547 Msa0389610:CDS 40.0%
TCTTAAATGATCAGCGGTGT+CGG - chr3_1:94545723-94545742 Msa0389610:intron 40.0%
!!! ACCCTTAACCTTTTTTGTGG+GGG - chr3_1:94546136-94546155 Msa0389610:CDS 40.0%
TCCCCCACAAAAAAGGTTAA+GGG + chr3_1:94546140-94546159 None:intergenic 40.0%
! ACCCTTAACCTTATTTGTGG+GGG - chr3_1:94546229-94546248 Msa0389610:intron 40.0%
TCCCCCACAAATAAGGTTAA+GGG + chr3_1:94546233-94546252 None:intergenic 40.0%
AGTTTACTCCCCCACAAATA+AGG + chr3_1:94546240-94546259 None:intergenic 40.0%
AAAATCACGGCATTGCTGAA+GGG + chr3_1:94546414-94546433 None:intergenic 40.0%
AAAAATCACGGCATTGCTGA+AGG + chr3_1:94546415-94546434 None:intergenic 40.0%
! TGTTGTTGAGCTGTTGATTG+AGG - chr3_1:94546449-94546468 Msa0389610:intron 40.0%
AGATGAGCTTGGAAAAGCTT+TGG - chr3_1:94546530-94546549 Msa0389610:intron 40.0%
GCAGTACTTAGAAATAGCAG+TGG + chr3_1:94546658-94546677 None:intergenic 40.0%
ACGAAAACAGAGACTCACAT+GGG + chr3_1:94546682-94546701 None:intergenic 40.0%
AACGAAAACAGAGACTCACA+TGG + chr3_1:94546683-94546702 None:intergenic 40.0%
CCAGTCTAAGAGTAAATCCA+GGG + chr3_1:94546879-94546898 None:intergenic 40.0%
ACCAGTCTAAGAGTAAATCC+AGG + chr3_1:94546880-94546899 None:intergenic 40.0%
TTGAAAACCTCAGCAGCAAT+GGG + chr3_1:94547247-94547266 None:intergenic 40.0%
TACGACGAGAAGAGATTGTT+TGG - chr3_1:94547280-94547299 Msa0389610:intron 40.0%
ACGACGAGAAGAGATTGTTT+GGG - chr3_1:94547281-94547300 Msa0389610:intron 40.0%
AGGGCAAAAACTTTCTATGC+TGG - chr3_1:94547325-94547344 Msa0389610:intron 40.0%
GGGCAAAAACTTTCTATGCT+GGG - chr3_1:94547326-94547345 Msa0389610:intron 40.0%
!!! GTTTTTTCTCGAGCAAGAAC+GGG - chr3_1:94547505-94547524 Msa0389610:CDS 40.0%
!!! TTTTTTCTCGAGCAAGAACG+GGG - chr3_1:94547506-94547525 Msa0389610:CDS 40.0%
GAGGTCAATGTACCTGTTAT+AGG - chr3_1:94547628-94547647 Msa0389610:intron 40.0%
GTCAATGTACCTGTTATAGG+AGG - chr3_1:94547631-94547650 Msa0389610:intron 40.0%
TTACGCCATTGACAAAGTTG+CGG + chr3_1:94547901-94547920 None:intergenic 40.0%
CATGTTTCTTGCAGTTATGC+TGG - chr3_1:94548062-94548081 Msa0389610:intron 40.0%
GAACTCCATTAAGACCTTTG+AGG + chr3_1:94548109-94548128 None:intergenic 40.0%
AGGAAGTTCAGCAATGAGAT+TGG + chr3_1:94548162-94548181 None:intergenic 40.0%
ACTTCCTTTCTTTGCTTCCA+AGG - chr3_1:94548175-94548194 Msa0389610:intron 40.0%
ATCACCTTGGAAGCAAAGAA+AGG + chr3_1:94548182-94548201 None:intergenic 40.0%
!! CTTGTTGTTTGTGGATGCAT+AGG - chr3_1:94548269-94548288 Msa0389610:intron 40.0%
GAATGGTGTAGAGGAAATTC+TGG - chr3_1:94548410-94548429 Msa0389610:intron 40.0%
CAAAATCTGAGAGAGAACCT+AGG + chr3_1:94548437-94548456 None:intergenic 40.0%
! GTTCAGACTTGAGGTTTTCA+AGG + chr3_1:94548470-94548489 None:intergenic 40.0%
!! ACATGTCATACATTTCTGGC+AGG - chr3_1:94548538-94548557 Msa0389610:intron 40.0%
!! ATACATTTCTGGCAGGTTAC+TGG - chr3_1:94548545-94548564 Msa0389610:intron 40.0%
CAAGAACAGTTTATTGCTGC+AGG - chr3_1:94548697-94548716 Msa0389610:CDS 40.0%
! TGGAAAGGCCAATCTAAAAC+TGG + chr3_1:94548737-94548756 None:intergenic 40.0%
AAGGGCCATTATGAATGGAA+AGG + chr3_1:94548752-94548771 None:intergenic 40.0%
TAGTGAAGGGCCATTATGAA+TGG + chr3_1:94548757-94548776 None:intergenic 40.0%
AATGGCCCTTCACTAATGTA+TGG - chr3_1:94548762-94548781 Msa0389610:CDS 40.0%
TGTGGACATATGTGAACTGT+TGG - chr3_1:94548973-94548992 Msa0389610:five_prime_UTR 40.0%
GGATGTGCATCATAAATCAG+TGG + chr3_1:94549011-94549030 None:intergenic 40.0%
TTATGCTTGGAGAGTGACGA+TGG + chr3_1:94545098-94545117 None:intergenic 45.0%
AATAGAGAGAGAGGGAGAGA+GGG + chr3_1:94545143-94545162 None:intergenic 45.0%
TCTCCCTCTCTCTCTATTCT+CGG - chr3_1:94545145-94545164 Msa0389610:three_prime_UTR 45.0%
CTTCCGAGAATAGAGAGAGA+GGG + chr3_1:94545151-94545170 None:intergenic 45.0%
TCTTCCGAGAATAGAGAGAG+AGG + chr3_1:94545152-94545171 None:intergenic 45.0%
! TTCTCGAAGCATCCATGATG+AGG - chr3_1:94545173-94545192 Msa0389610:three_prime_UTR 45.0%
AGCTTCATGAGAAGAGAGAG+GGG + chr3_1:94545322-94545341 None:intergenic 45.0%
GAGCTTCATGAGAAGAGAGA+GGG + chr3_1:94545323-94545342 None:intergenic 45.0%
TGAGCTTCATGAGAAGAGAG+AGG + chr3_1:94545324-94545343 None:intergenic 45.0%
GAGAAAGGGTTGAAACGAGA+GGG + chr3_1:94545348-94545367 None:intergenic 45.0%
AGAGAAAGGGTTGAAACGAG+AGG + chr3_1:94545349-94545368 None:intergenic 45.0%
TATGATATTGCTGGTACCCC+TGG - chr3_1:94545370-94545389 Msa0389610:three_prime_UTR 45.0%
!! GGAGTTGATGTGGCTAACAT+CGG + chr3_1:94545404-94545423 None:intergenic 45.0%
!! TGAAAAGGGTACCTGAGATC+TGG + chr3_1:94545425-94545444 None:intergenic 45.0%
! ATCTCAGGTACCCTTTTCAC+TGG - chr3_1:94545426-94545445 Msa0389610:three_prime_UTR 45.0%
GTGTCTATGTCTGTCTTGTG+CGG - chr3_1:94545753-94545772 Msa0389610:intron 45.0%
CTCCCCCACAAAAAAGGTTA+AGG + chr3_1:94546141-94546160 None:intergenic 45.0%
AGTTCACTCCCCCACAAAAA+AGG + chr3_1:94546147-94546166 None:intergenic 45.0%
CTCCCCCACAAATAAGGTTA+AGG + chr3_1:94546234-94546253 None:intergenic 45.0%
! TGAGCTTGGAAAAGCTTTGG+AGG - chr3_1:94546533-94546552 Msa0389610:intron 45.0%
!! GAGCTTGGAAAAGCTTTGGA+GGG - chr3_1:94546534-94546553 Msa0389610:intron 45.0%
GACGTTGTTATCATTCCTGC+CGG - chr3_1:94546561-94546580 Msa0389610:intron 45.0%
AGATCATCACGAGTCATTCC+AGG + chr3_1:94546600-94546619 None:intergenic 45.0%
GAAAACAGAGACTCACATGG+GGG + chr3_1:94546680-94546699 None:intergenic 45.0%
CGAAAACAGAGACTCACATG+GGG + chr3_1:94546681-94546700 None:intergenic 45.0%
CCCTGGATTTACTCTTAGAC+TGG - chr3_1:94546876-94546895 Msa0389610:intron 45.0%
TGAAAACCTCAGCAGCAATG+GGG + chr3_1:94547246-94547265 None:intergenic 45.0%
CTTGAAAACCTCAGCAGCAA+TGG + chr3_1:94547248-94547267 None:intergenic 45.0%
!! TGCTGCTGAGGTTTTCAAGA+AGG - chr3_1:94547249-94547268 Msa0389610:intron 45.0%
!! CTGAGGTTTTCAAGAAGGCA+GGG - chr3_1:94547254-94547273 Msa0389610:intron 45.0%
CGACGAGAAGAGATTGTTTG+GGG - chr3_1:94547282-94547301 Msa0389610:intron 45.0%
GGAAGCTAATGTTCCAGTTG+CGG - chr3_1:94547347-94547366 Msa0389610:intron 45.0%
GAAGCTAATGTTCCAGTTGC+GGG - chr3_1:94547348-94547367 Msa0389610:intron 45.0%
ACACTTTACATACCCGCAAC+TGG + chr3_1:94547363-94547382 None:intergenic 45.0%
! TTTTTCTCGAGCAAGAACGG+GGG - chr3_1:94547507-94547526 Msa0389610:CDS 45.0%
GGAGAATAGTAACTCCTGCA+TGG + chr3_1:94547657-94547676 None:intergenic 45.0%
!! TCATCATCCAGATTGGCTTG+AGG + chr3_1:94547804-94547823 None:intergenic 45.0%
! TCATTAAGGCTCTAACTGCG+AGG - chr3_1:94547826-94547845 Msa0389610:intron 45.0%
AACCTCTGTTCCTCCATCTT+GGG + chr3_1:94547853-94547872 None:intergenic 45.0%
TAGCCATGTTGATACTGGAC+TGG - chr3_1:94547930-94547949 Msa0389610:intron 45.0%
TGTCCAGTCCAGTATCAACA+TGG + chr3_1:94547936-94547955 None:intergenic 45.0%
ACTACACGAAAAACTCACCC+AGG + chr3_1:94548026-94548045 None:intergenic 45.0%
GAGGCAAGCATCAGCAAATA+TGG + chr3_1:94548090-94548109 None:intergenic 45.0%
TTTGCTGATGCTTGCCTCAA+AGG - chr3_1:94548092-94548111 Msa0389610:intron 45.0%
GCTTGCCTCAAAGGTCTTAA+TGG - chr3_1:94548101-94548120 Msa0389610:intron 45.0%
TACGAGCACTCAACAACATC+TGG + chr3_1:94548131-94548150 None:intergenic 45.0%
CATTGCAGTTTCGATCACCT+TGG + chr3_1:94548195-94548214 None:intergenic 45.0%
GATTGGGAAGAATGGTGTAG+AGG - chr3_1:94548401-94548420 Msa0389610:intron 45.0%
TGACATGTTCGATTACTGGG+AGG + chr3_1:94548526-94548545 None:intergenic 45.0%
TTATGCTTGGAGAGTGACGA+TGG + chr3_1:94545098-94545117 None:intergenic 45.0%
AATAGAGAGAGAGGGAGAGA+GGG + chr3_1:94545143-94545162 None:intergenic 45.0%
TCTCCCTCTCTCTCTATTCT+CGG - chr3_1:94545145-94545164 Msa0389610:three_prime_UTR 45.0%
CTTCCGAGAATAGAGAGAGA+GGG + chr3_1:94545151-94545170 None:intergenic 45.0%
TCTTCCGAGAATAGAGAGAG+AGG + chr3_1:94545152-94545171 None:intergenic 45.0%
! TTCTCGAAGCATCCATGATG+AGG - chr3_1:94545173-94545192 Msa0389610:three_prime_UTR 45.0%
AGCTTCATGAGAAGAGAGAG+GGG + chr3_1:94545322-94545341 None:intergenic 45.0%
GAGCTTCATGAGAAGAGAGA+GGG + chr3_1:94545323-94545342 None:intergenic 45.0%
TGAGCTTCATGAGAAGAGAG+AGG + chr3_1:94545324-94545343 None:intergenic 45.0%
GAGAAAGGGTTGAAACGAGA+GGG + chr3_1:94545348-94545367 None:intergenic 45.0%
AGAGAAAGGGTTGAAACGAG+AGG + chr3_1:94545349-94545368 None:intergenic 45.0%
TATGATATTGCTGGTACCCC+TGG - chr3_1:94545370-94545389 Msa0389610:three_prime_UTR 45.0%
!! GGAGTTGATGTGGCTAACAT+CGG + chr3_1:94545404-94545423 None:intergenic 45.0%
!! TGAAAAGGGTACCTGAGATC+TGG + chr3_1:94545425-94545444 None:intergenic 45.0%
! ATCTCAGGTACCCTTTTCAC+TGG - chr3_1:94545426-94545445 Msa0389610:three_prime_UTR 45.0%
GTGTCTATGTCTGTCTTGTG+CGG - chr3_1:94545753-94545772 Msa0389610:intron 45.0%
CTCCCCCACAAAAAAGGTTA+AGG + chr3_1:94546141-94546160 None:intergenic 45.0%
AGTTCACTCCCCCACAAAAA+AGG + chr3_1:94546147-94546166 None:intergenic 45.0%
CTCCCCCACAAATAAGGTTA+AGG + chr3_1:94546234-94546253 None:intergenic 45.0%
! TGAGCTTGGAAAAGCTTTGG+AGG - chr3_1:94546533-94546552 Msa0389610:intron 45.0%
!! GAGCTTGGAAAAGCTTTGGA+GGG - chr3_1:94546534-94546553 Msa0389610:intron 45.0%
GACGTTGTTATCATTCCTGC+CGG - chr3_1:94546561-94546580 Msa0389610:intron 45.0%
AGATCATCACGAGTCATTCC+AGG + chr3_1:94546600-94546619 None:intergenic 45.0%
GAAAACAGAGACTCACATGG+GGG + chr3_1:94546680-94546699 None:intergenic 45.0%
CGAAAACAGAGACTCACATG+GGG + chr3_1:94546681-94546700 None:intergenic 45.0%
CCCTGGATTTACTCTTAGAC+TGG - chr3_1:94546876-94546895 Msa0389610:intron 45.0%
TGAAAACCTCAGCAGCAATG+GGG + chr3_1:94547246-94547265 None:intergenic 45.0%
CTTGAAAACCTCAGCAGCAA+TGG + chr3_1:94547248-94547267 None:intergenic 45.0%
!! TGCTGCTGAGGTTTTCAAGA+AGG - chr3_1:94547249-94547268 Msa0389610:intron 45.0%
!! CTGAGGTTTTCAAGAAGGCA+GGG - chr3_1:94547254-94547273 Msa0389610:intron 45.0%
CGACGAGAAGAGATTGTTTG+GGG - chr3_1:94547282-94547301 Msa0389610:intron 45.0%
GGAAGCTAATGTTCCAGTTG+CGG - chr3_1:94547347-94547366 Msa0389610:intron 45.0%
GAAGCTAATGTTCCAGTTGC+GGG - chr3_1:94547348-94547367 Msa0389610:intron 45.0%
ACACTTTACATACCCGCAAC+TGG + chr3_1:94547363-94547382 None:intergenic 45.0%
! TTTTTCTCGAGCAAGAACGG+GGG - chr3_1:94547507-94547526 Msa0389610:CDS 45.0%
GGAGAATAGTAACTCCTGCA+TGG + chr3_1:94547657-94547676 None:intergenic 45.0%
!! TCATCATCCAGATTGGCTTG+AGG + chr3_1:94547804-94547823 None:intergenic 45.0%
! TCATTAAGGCTCTAACTGCG+AGG - chr3_1:94547826-94547845 Msa0389610:intron 45.0%
AACCTCTGTTCCTCCATCTT+GGG + chr3_1:94547853-94547872 None:intergenic 45.0%
TAGCCATGTTGATACTGGAC+TGG - chr3_1:94547930-94547949 Msa0389610:intron 45.0%
TGTCCAGTCCAGTATCAACA+TGG + chr3_1:94547936-94547955 None:intergenic 45.0%
ACTACACGAAAAACTCACCC+AGG + chr3_1:94548026-94548045 None:intergenic 45.0%
GAGGCAAGCATCAGCAAATA+TGG + chr3_1:94548090-94548109 None:intergenic 45.0%
TTTGCTGATGCTTGCCTCAA+AGG - chr3_1:94548092-94548111 Msa0389610:intron 45.0%
GCTTGCCTCAAAGGTCTTAA+TGG - chr3_1:94548101-94548120 Msa0389610:intron 45.0%
TACGAGCACTCAACAACATC+TGG + chr3_1:94548131-94548150 None:intergenic 45.0%
CATTGCAGTTTCGATCACCT+TGG + chr3_1:94548195-94548214 None:intergenic 45.0%
GATTGGGAAGAATGGTGTAG+AGG - chr3_1:94548401-94548420 Msa0389610:intron 45.0%
TGACATGTTCGATTACTGGG+AGG + chr3_1:94548526-94548545 None:intergenic 45.0%
!! AATATAAATAAGAAATAAAA+AGG + chr3_1:94548831-94548850 None:intergenic 5.0%
!! AATATAAATAAGAAATAAAA+AGG + chr3_1:94548831-94548850 None:intergenic 5.0%
GAATAGAGAGAGAGGGAGAG+AGG + chr3_1:94545144-94545163 None:intergenic 50.0%
!! TGGACGGATCTGAGTATCGA+CGG + chr3_1:94545199-94545218 None:intergenic 50.0%
TAACATCGGCAGCAACACCA+GGG + chr3_1:94545390-94545409 None:intergenic 50.0%
!! CCTGAGATCTGGAGTTGATG+TGG + chr3_1:94545414-94545433 None:intergenic 50.0%
CCACATCAACTCCAGATCTC+AGG - chr3_1:94545411-94545430 Msa0389610:three_prime_UTR 50.0%
! ATGAGAGCACAAGCACTCCT+CGG - chr3_1:94545643-94545662 Msa0389610:intron 50.0%
TACGCAGGTGAAGATGAGCT+TGG - chr3_1:94546519-94546538 Msa0389610:intron 50.0%
CGAGTCATTCCAGGCTTTCT+GGG + chr3_1:94546591-94546610 None:intergenic 50.0%
ACGAGTCATTCCAGGCTTTC+TGG + chr3_1:94546592-94546611 None:intergenic 50.0%
TGGGGACAGTTGAGTTCACA+GGG + chr3_1:94547228-94547247 None:intergenic 50.0%
ATGGGGACAGTTGAGTTCAC+AGG + chr3_1:94547229-94547248 None:intergenic 50.0%
!! GCTGAGGTTTTCAAGAAGGC+AGG - chr3_1:94547253-94547272 Msa0389610:intron 50.0%
!!! TTTTGGCTTCCAAACGCTGC+TGG - chr3_1:94547737-94547756 Msa0389610:intron 50.0%
TTCCAAACGCTGCTGGTATG+TGG - chr3_1:94547744-94547763 Msa0389610:intron 50.0%
TACCACATACCAGCAGCGTT+TGG + chr3_1:94547749-94547768 None:intergenic 50.0%
CAACCTCTGTTCCTCCATCT+TGG + chr3_1:94547854-94547873 None:intergenic 50.0%
AACAGAGGTTGTGACTGCCA+AGG - chr3_1:94547863-94547882 Msa0389610:intron 50.0%
GGGTTCCGCAACTTTGTCAA+TGG - chr3_1:94547893-94547912 Msa0389610:intron 50.0%
CAGGTGAGGATTGGGAAGAA+TGG - chr3_1:94548393-94548412 Msa0389610:intron 50.0%
GTAGAGGAAATTCTGGGCCT+AGG - chr3_1:94548417-94548436 Msa0389610:intron 50.0%
GTTTGTAATGTTGCCGGCAG+AGG - chr3_1:94548615-94548634 Msa0389610:CDS 50.0%
TTATTAGGCTCAGGCTAGGG+TGG - chr3_1:94548916-94548935 Msa0389610:five_prime_UTR 50.0%
GTCCACGTGGATGAGTTATG+TGG - chr3_1:94548955-94548974 Msa0389610:five_prime_UTR 50.0%
GTCCACATAACTCATCCACG+TGG + chr3_1:94548960-94548979 None:intergenic 50.0%
GAATAGAGAGAGAGGGAGAG+AGG + chr3_1:94545144-94545163 None:intergenic 50.0%
!! TGGACGGATCTGAGTATCGA+CGG + chr3_1:94545199-94545218 None:intergenic 50.0%
TAACATCGGCAGCAACACCA+GGG + chr3_1:94545390-94545409 None:intergenic 50.0%
!! CCTGAGATCTGGAGTTGATG+TGG + chr3_1:94545414-94545433 None:intergenic 50.0%
CCACATCAACTCCAGATCTC+AGG - chr3_1:94545411-94545430 Msa0389610:three_prime_UTR 50.0%
! ATGAGAGCACAAGCACTCCT+CGG - chr3_1:94545643-94545662 Msa0389610:intron 50.0%
TACGCAGGTGAAGATGAGCT+TGG - chr3_1:94546519-94546538 Msa0389610:intron 50.0%
CGAGTCATTCCAGGCTTTCT+GGG + chr3_1:94546591-94546610 None:intergenic 50.0%
ACGAGTCATTCCAGGCTTTC+TGG + chr3_1:94546592-94546611 None:intergenic 50.0%
TGGGGACAGTTGAGTTCACA+GGG + chr3_1:94547228-94547247 None:intergenic 50.0%
ATGGGGACAGTTGAGTTCAC+AGG + chr3_1:94547229-94547248 None:intergenic 50.0%
!! GCTGAGGTTTTCAAGAAGGC+AGG - chr3_1:94547253-94547272 Msa0389610:intron 50.0%
!!! TTTTGGCTTCCAAACGCTGC+TGG - chr3_1:94547737-94547756 Msa0389610:intron 50.0%
TTCCAAACGCTGCTGGTATG+TGG - chr3_1:94547744-94547763 Msa0389610:intron 50.0%
TACCACATACCAGCAGCGTT+TGG + chr3_1:94547749-94547768 None:intergenic 50.0%
CAACCTCTGTTCCTCCATCT+TGG + chr3_1:94547854-94547873 None:intergenic 50.0%
AACAGAGGTTGTGACTGCCA+AGG - chr3_1:94547863-94547882 Msa0389610:intron 50.0%
GGGTTCCGCAACTTTGTCAA+TGG - chr3_1:94547893-94547912 Msa0389610:intron 50.0%
CAGGTGAGGATTGGGAAGAA+TGG - chr3_1:94548393-94548412 Msa0389610:intron 50.0%
GTAGAGGAAATTCTGGGCCT+AGG - chr3_1:94548417-94548436 Msa0389610:intron 50.0%
GTTTGTAATGTTGCCGGCAG+AGG - chr3_1:94548615-94548634 Msa0389610:CDS 50.0%
TTATTAGGCTCAGGCTAGGG+TGG - chr3_1:94548916-94548935 Msa0389610:five_prime_UTR 50.0%
GTCCACGTGGATGAGTTATG+TGG - chr3_1:94548955-94548974 Msa0389610:five_prime_UTR 50.0%
GTCCACATAACTCATCCACG+TGG + chr3_1:94548960-94548979 None:intergenic 50.0%
!! GAGTATCGACGGCCTCATCA+TGG + chr3_1:94545188-94545207 None:intergenic 55.0%
CTTGCGTTCAGGAACCGGTT+CGG + chr3_1:94545263-94545282 None:intergenic 55.0%
AGAATGGCCACCTTGCGTTC+AGG + chr3_1:94545274-94545293 None:intergenic 55.0%
GAACGCAAGGTGGCCATTCT+CGG - chr3_1:94545274-94545293 Msa0389610:three_prime_UTR 55.0%
AACATCGGCAGCAACACCAG+GGG + chr3_1:94545389-94545408 None:intergenic 55.0%
CTAACATCGGCAGCAACACC+AGG + chr3_1:94545391-94545410 None:intergenic 55.0%
GCACAAGCACTCCTCGGATT+AGG - chr3_1:94545649-94545668 Msa0389610:intron 55.0%
! TCCTCGGATTAGGCGTGTCT+CGG - chr3_1:94545659-94545678 Msa0389610:intron 55.0%
ATGCAGGTAACTGGGTACGC+AGG - chr3_1:94546504-94546523 Msa0389610:intron 55.0%
AACTGTCCCCATTGCTGCTG+AGG - chr3_1:94547237-94547256 Msa0389610:intron 55.0%
CCTGCATGGCCTCCTATAAC+AGG + chr3_1:94547643-94547662 None:intergenic 55.0%
CCTGTTATAGGAGGCCATGC+AGG - chr3_1:94547640-94547659 Msa0389610:intron 55.0%
GGCATCACCTCAAGCCAATC+TGG - chr3_1:94547794-94547813 Msa0389610:intron 55.0%
CTAACTGCGAGGACCCAAGA+TGG - chr3_1:94547837-94547856 Msa0389610:intron 55.0%
GACCCAAGATGGAGGAACAG+AGG - chr3_1:94547848-94547867 Msa0389610:intron 55.0%
TGTGACTGCCAAGGCTGGAA+AGG - chr3_1:94547872-94547891 Msa0389610:intron 55.0%
GTGACTGCCAAGGCTGGAAA+GGG - chr3_1:94547873-94547892 Msa0389610:intron 55.0%
TGTAATGTTGCCGGCAGAGG+TGG - chr3_1:94548618-94548637 Msa0389610:CDS 55.0%
AACAAAGCCACCACCTCTGC+CGG + chr3_1:94548631-94548650 None:intergenic 55.0%
!! GAGTATCGACGGCCTCATCA+TGG + chr3_1:94545188-94545207 None:intergenic 55.0%
CTTGCGTTCAGGAACCGGTT+CGG + chr3_1:94545263-94545282 None:intergenic 55.0%
AGAATGGCCACCTTGCGTTC+AGG + chr3_1:94545274-94545293 None:intergenic 55.0%
GAACGCAAGGTGGCCATTCT+CGG - chr3_1:94545274-94545293 Msa0389610:three_prime_UTR 55.0%
AACATCGGCAGCAACACCAG+GGG + chr3_1:94545389-94545408 None:intergenic 55.0%
CTAACATCGGCAGCAACACC+AGG + chr3_1:94545391-94545410 None:intergenic 55.0%
GCACAAGCACTCCTCGGATT+AGG - chr3_1:94545649-94545668 Msa0389610:intron 55.0%
! TCCTCGGATTAGGCGTGTCT+CGG - chr3_1:94545659-94545678 Msa0389610:intron 55.0%
ATGCAGGTAACTGGGTACGC+AGG - chr3_1:94546504-94546523 Msa0389610:intron 55.0%
AACTGTCCCCATTGCTGCTG+AGG - chr3_1:94547237-94547256 Msa0389610:intron 55.0%
CCTGCATGGCCTCCTATAAC+AGG + chr3_1:94547643-94547662 None:intergenic 55.0%
CCTGTTATAGGAGGCCATGC+AGG - chr3_1:94547640-94547659 Msa0389610:intron 55.0%
GGCATCACCTCAAGCCAATC+TGG - chr3_1:94547794-94547813 Msa0389610:intron 55.0%
CTAACTGCGAGGACCCAAGA+TGG - chr3_1:94547837-94547856 Msa0389610:intron 55.0%
GACCCAAGATGGAGGAACAG+AGG - chr3_1:94547848-94547867 Msa0389610:intron 55.0%
TGTGACTGCCAAGGCTGGAA+AGG - chr3_1:94547872-94547891 Msa0389610:intron 55.0%
GTGACTGCCAAGGCTGGAAA+GGG - chr3_1:94547873-94547892 Msa0389610:intron 55.0%
TGTAATGTTGCCGGCAGAGG+TGG - chr3_1:94548618-94548637 Msa0389610:CDS 55.0%
AACAAAGCCACCACCTCTGC+CGG + chr3_1:94548631-94548650 None:intergenic 55.0%
! CGAACCGGTTCCTGAACGCA+AGG - chr3_1:94545261-94545280 Msa0389610:three_prime_UTR 60.0%
! ACCGGTTCCTGAACGCAAGG+TGG - chr3_1:94545264-94545283 Msa0389610:three_prime_UTR 60.0%
GCCACCTTGCGTTCAGGAAC+CGG + chr3_1:94545268-94545287 None:intergenic 60.0%
TCTCGAGCAAGAACGGGGGT+CGG - chr3_1:94547511-94547530 Msa0389610:intron 60.0%
ACTGCGAGGACCCAAGATGG+AGG - chr3_1:94547840-94547859 Msa0389610:intron 60.0%
GAGGTTGTGACTGCCAAGGC+TGG - chr3_1:94547867-94547886 Msa0389610:intron 60.0%
TGCGGAACCCTTTCCAGCCT+TGG + chr3_1:94547883-94547902 None:intergenic 60.0%
AATGTTGCCGGCAGAGGTGG+TGG - chr3_1:94548621-94548640 Msa0389610:CDS 60.0%
CTCAGGCTAGGGTGGATGAG+TGG - chr3_1:94548924-94548943 Msa0389610:five_prime_UTR 60.0%
AGGCTAGGGTGGATGAGTGG+AGG - chr3_1:94548927-94548946 Msa0389610:five_prime_UTR 60.0%
AGTGGAGGAAGTCGTCCACG+TGG - chr3_1:94548942-94548961 Msa0389610:five_prime_UTR 60.0%
! CGAACCGGTTCCTGAACGCA+AGG - chr3_1:94545261-94545280 Msa0389610:three_prime_UTR 60.0%
! ACCGGTTCCTGAACGCAAGG+TGG - chr3_1:94545264-94545283 Msa0389610:three_prime_UTR 60.0%
GCCACCTTGCGTTCAGGAAC+CGG + chr3_1:94545268-94545287 None:intergenic 60.0%
TCTCGAGCAAGAACGGGGGT+CGG - chr3_1:94547511-94547530 Msa0389610:intron 60.0%
ACTGCGAGGACCCAAGATGG+AGG - chr3_1:94547840-94547859 Msa0389610:intron 60.0%
GAGGTTGTGACTGCCAAGGC+TGG - chr3_1:94547867-94547886 Msa0389610:intron 60.0%
TGCGGAACCCTTTCCAGCCT+TGG + chr3_1:94547883-94547902 None:intergenic 60.0%
AATGTTGCCGGCAGAGGTGG+TGG - chr3_1:94548621-94548640 Msa0389610:CDS 60.0%
CTCAGGCTAGGGTGGATGAG+TGG - chr3_1:94548924-94548943 Msa0389610:five_prime_UTR 60.0%
AGGCTAGGGTGGATGAGTGG+AGG - chr3_1:94548927-94548946 Msa0389610:five_prime_UTR 60.0%
AGTGGAGGAAGTCGTCCACG+TGG - chr3_1:94548942-94548961 Msa0389610:five_prime_UTR 60.0%
! GCGGGTTATGCTGCGGGACA+CGG + chr3_1:94545227-94545246 None:intergenic 65.0%
!! AGCCACGGCGGGTTATGCTG+CGG + chr3_1:94545234-94545253 None:intergenic 65.0%
TTCGGTGGCATAGCCACGGC+GGG + chr3_1:94545245-94545264 None:intergenic 65.0%
! GTTCGGTGGCATAGCCACGG+CGG + chr3_1:94545246-94545265 None:intergenic 65.0%
!! CCGGTTCGGTGGCATAGCCA+CGG + chr3_1:94545249-94545268 None:intergenic 65.0%
CCGTGGCTATGCCACCGAAC+CGG - chr3_1:94545246-94545265 Msa0389610:three_prime_UTR 65.0%
!! GCGTTCAGGAACCGGTTCGG+TGG + chr3_1:94545260-94545279 None:intergenic 65.0%
GCCGAGACACGCCTAATCCG+AGG + chr3_1:94545663-94545682 None:intergenic 65.0%
TCCAGGCTTTCTGGGCACGC+CGG + chr3_1:94546583-94546602 None:intergenic 65.0%
GAGCAAGAACGGGGGTCGGT+GGG - chr3_1:94547515-94547534 Msa0389610:intron 65.0%
AGCAAGAACGGGGGTCGGTG+GGG - chr3_1:94547516-94547535 Msa0389610:intron 65.0%
! GCGGGTTATGCTGCGGGACA+CGG + chr3_1:94545227-94545246 None:intergenic 65.0%
!! AGCCACGGCGGGTTATGCTG+CGG + chr3_1:94545234-94545253 None:intergenic 65.0%
TTCGGTGGCATAGCCACGGC+GGG + chr3_1:94545245-94545264 None:intergenic 65.0%
! GTTCGGTGGCATAGCCACGG+CGG + chr3_1:94545246-94545265 None:intergenic 65.0%
!! CCGGTTCGGTGGCATAGCCA+CGG + chr3_1:94545249-94545268 None:intergenic 65.0%
CCGTGGCTATGCCACCGAAC+CGG - chr3_1:94545246-94545265 Msa0389610:three_prime_UTR 65.0%
!! GCGTTCAGGAACCGGTTCGG+TGG + chr3_1:94545260-94545279 None:intergenic 65.0%
GCCGAGACACGCCTAATCCG+AGG + chr3_1:94545663-94545682 None:intergenic 65.0%
TCCAGGCTTTCTGGGCACGC+CGG + chr3_1:94546583-94546602 None:intergenic 65.0%
GAGCAAGAACGGGGGTCGGT+GGG - chr3_1:94547515-94547534 Msa0389610:intron 65.0%
AGCAAGAACGGGGGTCGGTG+GGG - chr3_1:94547516-94547535 Msa0389610:intron 65.0%
GCGGGACACGGCTGACTGGA+CGG + chr3_1:94545215-94545234 None:intergenic 70.0%
TGCTGCGGGACACGGCTGAC+TGG + chr3_1:94545219-94545238 None:intergenic 70.0%
TCCCGCAGCATAACCCGCCG+TGG - chr3_1:94545229-94545248 Msa0389610:three_prime_UTR 70.0%
!! GCCACGGCGGGTTATGCTGC+GGG + chr3_1:94545233-94545252 None:intergenic 70.0%
!! GTGGCCATTCTCGGTGCCGC+CGG - chr3_1:94545283-94545302 Msa0389610:three_prime_UTR 70.0%
!! CCATTCTCGGTGCCGCCGGT+GGG - chr3_1:94545287-94545306 Msa0389610:three_prime_UTR 70.0%
GAGGGGCTGACCGATCCCAC+CGG + chr3_1:94545305-94545324 None:intergenic 70.0%
CGAGCAAGAACGGGGGTCGG+TGG - chr3_1:94547514-94547533 Msa0389610:intron 70.0%
GAACGGGGGTCGGTGGGGAA+AGG - chr3_1:94547521-94547540 Msa0389610:intron 70.0%
GCGGGACACGGCTGACTGGA+CGG + chr3_1:94545215-94545234 None:intergenic 70.0%
TGCTGCGGGACACGGCTGAC+TGG + chr3_1:94545219-94545238 None:intergenic 70.0%
TCCCGCAGCATAACCCGCCG+TGG - chr3_1:94545229-94545248 Msa0389610:three_prime_UTR 70.0%
!! GCCACGGCGGGTTATGCTGC+GGG + chr3_1:94545233-94545252 None:intergenic 70.0%
!! GTGGCCATTCTCGGTGCCGC+CGG - chr3_1:94545283-94545302 Msa0389610:three_prime_UTR 70.0%
!! CCATTCTCGGTGCCGCCGGT+GGG - chr3_1:94545287-94545306 Msa0389610:three_prime_UTR 70.0%
GAGGGGCTGACCGATCCCAC+CGG + chr3_1:94545305-94545324 None:intergenic 70.0%
CGAGCAAGAACGGGGGTCGG+TGG - chr3_1:94547514-94547533 Msa0389610:intron 70.0%
GAACGGGGGTCGGTGGGGAA+AGG - chr3_1:94547521-94547540 Msa0389610:intron 70.0%
!! GCCATTCTCGGTGCCGCCGG+TGG - chr3_1:94545286-94545305 Msa0389610:three_prime_UTR 75.0%
! CCCACCGGCGGCACCGAGAA+TGG + chr3_1:94545290-94545309 None:intergenic 75.0%
!! CTCGGTGCCGCCGGTGGGAT+CGG - chr3_1:94545292-94545311 Msa0389610:three_prime_UTR 75.0%
GGGCTGACCGATCCCACCGG+CGG + chr3_1:94545302-94545321 None:intergenic 75.0%
GGCTTTCTGGGCACGCCGGC+AGG + chr3_1:94546579-94546598 None:intergenic 75.0%
GCCGGCGTGCCCAGAAAGCC+TGG - chr3_1:94546579-94546598 Msa0389610:intron 75.0%
!! GCCATTCTCGGTGCCGCCGG+TGG - chr3_1:94545286-94545305 Msa0389610:three_prime_UTR 75.0%
! CCCACCGGCGGCACCGAGAA+TGG + chr3_1:94545290-94545309 None:intergenic 75.0%
!! CTCGGTGCCGCCGGTGGGAT+CGG - chr3_1:94545292-94545311 Msa0389610:three_prime_UTR 75.0%
GGGCTGACCGATCCCACCGG+CGG + chr3_1:94545302-94545321 None:intergenic 75.0%
GGCTTTCTGGGCACGCCGGC+AGG + chr3_1:94546579-94546598 None:intergenic 75.0%
GCCGGCGTGCCCAGAAAGCC+TGG - chr3_1:94546579-94546598 Msa0389610:intron 75.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 94544973 94549063 94544973 ID=Msa0389610;Name=Msa0389610
chr3_1 mRNA 94544973 94549063 94544973 ID=Msa0389610-mRNA-1;Parent=Msa0389610;Name=Msa0389610-mRNA-1;_AED=0.07;_eAED=0.07;_QI=214|0.83|0.85|1|1|1|7|530|342
chr3_1 exon 94544973 94545640 94544973 ID=Msa0389610-mRNA-1:exon:26902;Parent=Msa0389610-mRNA-1
chr3_1 exon 94545840 94545960 94545840 ID=Msa0389610-mRNA-1:exon:26901;Parent=Msa0389610-mRNA-1
chr3_1 exon 94546120 94546241 94546120 ID=Msa0389610-mRNA-1:exon:26900;Parent=Msa0389610-mRNA-1
chr3_1 exon 94546346 94546405 94546346 ID=Msa0389610-mRNA-1:exon:26899;Parent=Msa0389610-mRNA-1
chr3_1 exon 94546667 94546834 94546667 ID=Msa0389610-mRNA-1:exon:26898;Parent=Msa0389610-mRNA-1
chr3_1 exon 94547353 94547526 94547353 ID=Msa0389610-mRNA-1:exon:26897;Parent=Msa0389610-mRNA-1
chr3_1 exon 94548604 94549063 94548604 ID=Msa0389610-mRNA-1:exon:26896;Parent=Msa0389610-mRNA-1
chr3_1 five_prime_UTR 94548850 94549063 94548850 ID=Msa0389610-mRNA-1:five_prime_utr;Parent=Msa0389610-mRNA-1
chr3_1 CDS 94548604 94548849 94548604 ID=Msa0389610-mRNA-1:cds;Parent=Msa0389610-mRNA-1
chr3_1 CDS 94547353 94547526 94547353 ID=Msa0389610-mRNA-1:cds;Parent=Msa0389610-mRNA-1
chr3_1 CDS 94546667 94546834 94546667 ID=Msa0389610-mRNA-1:cds;Parent=Msa0389610-mRNA-1
chr3_1 CDS 94546346 94546405 94546346 ID=Msa0389610-mRNA-1:cds;Parent=Msa0389610-mRNA-1
chr3_1 CDS 94546120 94546241 94546120 ID=Msa0389610-mRNA-1:cds;Parent=Msa0389610-mRNA-1
chr3_1 CDS 94545840 94545960 94545840 ID=Msa0389610-mRNA-1:cds;Parent=Msa0389610-mRNA-1
chr3_1 CDS 94545503 94545640 94545503 ID=Msa0389610-mRNA-1:cds;Parent=Msa0389610-mRNA-1
chr3_1 three_prime_UTR 94544973 94545502 94544973 ID=Msa0389610-mRNA-1:three_prime_utr;Parent=Msa0389610-mRNA-1
Gene Sequence

>Msa0389610

ATGATGAGGCCGTCGATACTCAGATCCGTCCAGTCAGCCGTGTCCCGCAGCATAACCCGCCGTGGCTATGCCACCGAACCGGTTCCTGAACGCAAGGTGGCCATTCTCGGTGCCGCCGGTGGGATCGGTCAGCCCCTCTCTCTTCTCATGAAGCTCAACCCTCTCGTTTCAACCCTTTCTCTTTATGATATTGCTGGTACCCCTGGTGTTGCTGCCGATGTTAGCCACATCAACTCCAGATCTCAGGTAACTGGGTACGCAGGTGAAGATGAGCTTGGAAAAGCTTTGGAGGGTGCTGACGTTGTTATCATTCCTGCCGGCGTGCCCAGAAAGCCTGGAATGACTCGTGATGATCTTTTCAACATTAACGCTGGCATTGTTAAATCACTTGCCACTGCTATTTCTAAGTACTGCCCCCATGCTCTTGTTAACATGATAAGCAACCCTGTGAACTCAACTGTCCCCATTGCTGCTGAGGTTTTCAAGAAGGCAGGGACATACGACGAGAAGAGATTGTTTGGGGTTACAACTCTTGATGTAGTTAGGGCAAAAACTTTCTATGCTGGGAAGCTAATGTTCCAGTTGCGGGTCAATGTACCTGTTATAGGAGGCCATGCAGGAGTTACTATTCTCCCACTATTTTCTCAGGCATCACCTCAAGCCAATCTGGATGATGATGTCATTAAGGCTCTAACTGCGAGGACCCAAGATGGAGGAACAGAGGTTGTGACTGCCAAGGCTGGAAAGGGTTCCGCAACTTTGTCAATGGCTTATGCTGGAGCCATATTTGCTGATGCTTGCCTCAAAGGTCTTAATGGAGTTCCAGATGTTGTTGAGTGCTCGTATGTGCAATCCAATCTCATTGCTGAACTTCCTTTCTTTGCTTCCAAGGTGAGGATTGGGAAGAATGGTGTAGAGGAAATTCTGGGCCTAGGTTCTCTCTCAGATTTTGAGAAACAAGGCCTTGAAAACCTCAAGTCTGAACTTAAGTCATCTATTGAGAAGGGAATCAAATTTGCCTCCCAGTAA
Protein sequence

>Msa0389610

MMRPSILRSVQSAVSRSITRRGYATEPVPERKVAILGAAGGIGQPLSLLMKLNPLVSTLSLYDIAGTPGVAADVSHINSRSQVTGYAGEDELGKALEGADVVIIPAGVPRKPGMTRDDLFNINAGIVKSLATAISKYCPHALVNMISNPVNSTVPIAAEVFKKAGTYDEKRLFGVTTLDVVRAKTFYAGKLMFQLRVNVPVIGGHAGVTILPLFSQASPQANLDDDVIKALTARTQDGGTEVVTAKAGKGSATLSMAYAGAIFADACLKGLNGVPDVVECSYVQSNLIAELPFFASKVRIGKNGVEEILGLGSLSDFEKQGLENLKSELKSSIEKGIKFASQ*