AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0369720

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0369720 MtrunA17_Chr3g0114451 82.986 288 30 2 1 270 1 287 1.14e-167 477
Msa0369720 MtrunA17_Chr3g0114451 91.878 197 16 0 335 531 122 318 5.33e-128 376
Msa0369720 MtrunA17_Chr3g0114461 90.217 184 17 1 349 531 9 192 4.55e-118 346
Msa0369720 MtrunA17_Chr3g0114461 89.542 153 16 0 118 270 9 161 8.01e-94 284
Msa0369720 MtrunA17_Chr5g0438021 57.246 276 92 5 6 261 16 285 5.86e-96 294
Msa0369720 MtrunA17_Chr5g0438021 55.276 199 87 1 335 531 127 325 3.39e-68 222
Msa0369720 MtrunA17_Chr3g0129051 50.671 298 117 5 1 275 9 299 7.07e-94 289
Msa0369720 MtrunA17_Chr3g0129051 55.779 199 86 1 335 531 124 322 2.47e-70 228
Msa0369720 MtrunA17_Chr3g0129051 47.368 76 34 1 273 348 4 73 2.00e-13 71.6
Msa0369720 MtrunA17_Chr3g0129061 54.945 273 96 4 6 258 14 279 2.87e-92 285
Msa0369720 MtrunA17_Chr3g0129061 59.459 185 73 1 349 531 138 322 6.09e-70 227
Msa0369720 MtrunA17_Chr3g0129061 53.030 66 25 1 283 348 14 73 1.27e-12 68.9
Msa0369720 MtrunA17_Chr3g0106901 52.612 268 105 2 5 254 14 277 4.51e-92 284
Msa0369720 MtrunA17_Chr3g0106901 56.284 183 80 0 349 531 141 323 7.54e-67 219
Msa0369720 MtrunA17_Chr3g0106901 43.478 92 46 2 282 373 14 99 1.13e-14 75.1
Msa0369720 MtrunA17_Chr3g0129041 53.480 273 100 4 6 258 14 279 1.38e-90 280
Msa0369720 MtrunA17_Chr3g0129041 58.919 185 74 1 349 531 138 322 1.48e-67 221
Msa0369720 MtrunA17_Chr3g0106921 56.015 266 93 5 25 267 24 288 8.88e-90 278
Msa0369720 MtrunA17_Chr3g0106921 52.968 219 93 3 323 531 102 320 8.45e-67 219
Msa0369720 MtrunA17_Chr7g0244461 51.908 262 107 2 25 267 19 280 2.00e-87 272
Msa0369720 MtrunA17_Chr7g0244461 53.241 216 94 1 323 531 97 312 1.82e-69 225
Msa0369720 MtrunA17_Chr2g0320071 50.350 286 122 3 1 267 1 285 1.43e-86 270
Msa0369720 MtrunA17_Chr2g0320071 54.822 197 89 0 335 531 121 317 2.01e-66 218
Msa0369720 MtrunA17_Chr2g0320071 29.187 209 124 6 282 485 4 193 5.79e-14 73.2
Msa0369720 MtrunA17_Chr5g0432441 55.952 252 89 3 25 254 29 280 3.25e-86 269
Msa0369720 MtrunA17_Chr5g0432441 55.000 220 88 3 323 531 107 326 4.09e-69 225
Msa0369720 MtrunA17_Chr4g0013201 51.807 249 102 1 24 254 44 292 6.26e-86 269
Msa0369720 MtrunA17_Chr4g0013201 53.807 197 91 0 335 531 142 338 8.01e-66 216
Msa0369720 MtrunA17_Chr2g0320101 49.827 289 118 3 1 263 1 288 1.29e-85 267
Msa0369720 MtrunA17_Chr2g0320101 54.315 197 90 0 335 531 121 317 3.82e-65 214
Msa0369720 MtrunA17_Chr2g0320101 30.097 206 120 6 285 485 7 193 8.59e-14 72.4
Msa0369720 MtrunA17_Chr1g0213061 50.376 266 110 4 25 270 26 289 1.18e-83 263
Msa0369720 MtrunA17_Chr1g0213061 49.500 200 97 3 335 531 123 321 1.61e-59 200
Msa0369720 MtrunA17_Chr4g0013171 50.871 287 114 5 3 267 8 289 1.87e-83 262
Msa0369720 MtrunA17_Chr4g0013171 53.881 219 100 1 314 531 103 321 7.79e-72 232
Msa0369720 MtrunA17_Chr2g0320061 51.504 266 102 3 25 263 24 289 9.25e-83 260
Msa0369720 MtrunA17_Chr2g0320061 40.064 312 122 4 285 531 7 318 7.39e-63 208
Msa0369720 MtrunA17_Chr7g0244451 54.098 244 94 1 25 250 23 266 3.69e-82 258
Msa0369720 MtrunA17_Chr7g0244451 48.148 216 105 1 323 531 101 316 7.15e-57 192
Msa0369720 MtrunA17_Chr3g0107881 47.387 287 125 4 5 267 8 292 8.10e-82 258
Msa0369720 MtrunA17_Chr3g0107881 48.869 221 109 2 315 531 104 324 9.44e-60 200
Msa0369720 MtrunA17_Chr4g0013181 52.874 261 100 4 29 267 62 321 1.24e-80 256
Msa0369720 MtrunA17_Chr4g0013181 52.968 219 102 1 314 531 135 353 4.10e-69 226
Msa0369720 MtrunA17_Chr2g0320091 51.282 273 112 3 25 278 24 294 1.56e-80 254
Msa0369720 MtrunA17_Chr2g0320091 53.535 198 91 1 335 531 121 318 1.95e-61 204
Msa0369720 MtrunA17_Chr2g0320091 28.774 212 128 6 278 485 1 193 5.51e-12 67.0
Msa0369720 MtrunA17_Chr2g0320051 50.000 266 106 3 25 263 24 289 5.01e-79 250
Msa0369720 MtrunA17_Chr2g0320051 39.103 312 125 4 285 531 7 318 2.56e-59 199
Msa0369720 MtrunA17_Chr2g0320031 46.341 287 134 2 1 267 1 287 6.07e-79 250
Msa0369720 MtrunA17_Chr2g0320031 50.000 226 99 3 320 531 94 319 1.49e-60 202
Msa0369720 MtrunA17_Chr5g0432351 48.014 277 119 5 4 258 5 278 5.62e-77 245
Msa0369720 MtrunA17_Chr5g0432351 46.396 222 114 3 314 531 101 321 1.21e-56 192
Msa0369720 MtrunA17_Chr5g0432351 47.143 70 35 1 279 348 3 70 8.26e-12 66.6
Msa0369720 MtrunA17_Chr5g0432341 48.364 275 117 5 6 258 7 278 1.72e-76 244
Msa0369720 MtrunA17_Chr5g0432341 45.946 222 115 3 314 531 101 321 1.09e-56 192
Msa0369720 MtrunA17_Chr5g0432341 53.030 66 29 1 283 348 7 70 2.33e-12 68.2
Msa0369720 MtrunA17_Chr7g0224371 45.238 294 131 4 1 268 9 298 1.90e-76 244
Msa0369720 MtrunA17_Chr7g0224371 51.777 197 94 1 335 531 127 322 3.18e-59 199
Msa0369720 MtrunA17_Chr4g0013191 47.482 278 116 4 7 254 17 294 2.03e-76 244
Msa0369720 MtrunA17_Chr4g0013191 52.764 199 92 1 335 531 142 340 4.66e-61 204
Msa0369720 MtrunA17_Chr4g0038171 47.368 285 122 5 7 267 9 289 2.51e-76 243
Msa0369720 MtrunA17_Chr4g0038171 48.020 202 100 3 335 531 120 321 1.98e-51 178
Msa0369720 MtrunA17_Chr5g0432331 50.781 256 103 4 25 258 55 309 4.03e-76 244
Msa0369720 MtrunA17_Chr5g0432331 47.297 222 112 3 314 531 132 352 1.98e-55 190
Msa0369720 MtrunA17_Chr5g0432331 48.485 66 32 1 283 348 38 101 5.61e-11 64.3
Msa0369720 MtrunA17_Chr4g0043391 47.018 285 123 5 7 267 12 292 6.20e-76 243
Msa0369720 MtrunA17_Chr4g0043391 47.030 202 102 3 335 531 123 324 1.09e-50 176
Msa0369720 MtrunA17_Chr8g0372601 48.529 272 105 3 26 262 30 301 3.71e-75 241
Msa0369720 MtrunA17_Chr8g0372601 51.152 217 95 3 326 531 114 330 7.62e-57 193
Msa0369720 MtrunA17_Chr5g0404721 47.744 266 114 2 30 270 34 299 4.32e-74 238
Msa0369720 MtrunA17_Chr5g0404721 50.000 224 101 3 319 531 107 330 1.38e-57 195
Msa0369720 MtrunA17_Chr4g0068621 44.333 300 135 3 3 270 6 305 5.18e-74 238
Msa0369720 MtrunA17_Chr4g0068621 42.128 235 123 3 310 531 102 336 1.37e-45 163
Msa0369720 MtrunA17_Chr4g0038151 48.315 267 113 5 25 267 24 289 3.33e-73 235
Msa0369720 MtrunA17_Chr4g0038151 47.761 201 101 2 335 531 121 321 1.88e-52 181
Msa0369720 MtrunA17_Chr4g0038161 46.739 276 118 5 1 254 6 274 1.77e-71 231
Msa0369720 MtrunA17_Chr4g0038161 47.761 201 101 2 335 531 120 320 1.80e-52 181
Msa0369720 MtrunA17_Chr1g0175561 45.196 281 119 5 2 255 8 280 4.58e-69 225
Msa0369720 MtrunA17_Chr1g0175561 35.831 307 123 6 299 531 20 326 2.03e-52 181
Msa0369720 MtrunA17_Chr7g0258811 47.410 251 106 3 25 249 68 318 5.49e-69 226
Msa0369720 MtrunA17_Chr7g0258811 41.739 230 109 4 311 531 158 371 4.27e-51 179
Msa0369720 MtrunA17_Chr7g0258811 31.159 138 85 2 277 411 50 180 7.54e-11 63.9
Msa0369720 MtrunA17_Chr1g0155611 46.691 272 117 4 26 270 46 316 1.78e-68 224
Msa0369720 MtrunA17_Chr1g0155611 49.215 191 88 2 350 531 157 347 2.25e-51 179
Msa0369720 MtrunA17_Chr4g0070951 46.154 273 116 4 2 249 8 274 5.29e-68 222
Msa0369720 MtrunA17_Chr4g0070951 39.754 244 129 3 306 531 86 329 5.75e-45 161
Msa0369720 MtrunA17_Chr4g0070951 52.941 68 28 1 281 348 10 73 1.51e-14 75.1
Msa0369720 MtrunA17_Chr2g0291751 48.400 250 104 2 25 249 28 277 2.76e-67 221
Msa0369720 MtrunA17_Chr2g0291751 44.255 235 115 3 313 531 96 330 4.39e-50 176
Msa0369720 MtrunA17_Chr2g0292211 46.800 250 108 3 25 249 39 288 3.11e-67 221
Msa0369720 MtrunA17_Chr2g0292211 48.421 190 89 3 351 531 152 341 3.37e-48 171
Msa0369720 MtrunA17_Chr2g0292091 44.664 253 115 2 22 249 20 272 7.42e-67 219
Msa0369720 MtrunA17_Chr2g0292091 42.544 228 118 4 316 531 99 325 5.42e-48 169
Msa0369720 MtrunA17_Chr2g0292151 46.400 250 109 2 25 249 28 277 1.34e-66 219
Msa0369720 MtrunA17_Chr2g0292151 42.128 235 120 3 313 531 96 330 5.06e-47 167
Msa0369720 MtrunA17_Chr2g0299691 46.520 273 112 5 30 270 60 330 1.36e-66 219
Msa0369720 MtrunA17_Chr2g0299691 37.386 329 126 8 278 531 35 358 5.07e-52 181
Msa0369720 MtrunA17_Chr3g0114491 84.298 121 19 0 14 134 6 126 3.59e-66 210
Msa0369720 MtrunA17_Chr3g0114491 50.413 121 54 3 292 408 7 125 5.32e-28 108
Msa0369720 MtrunA17_Chr5g0400331 45.455 264 116 2 15 250 15 278 4.65e-66 217
Msa0369720 MtrunA17_Chr5g0400331 44.550 211 102 3 335 531 122 331 8.88e-48 169
Msa0369720 MtrunA17_Chr2g0292251 44.622 251 114 2 25 250 27 277 4.67e-65 215
Msa0369720 MtrunA17_Chr2g0292251 43.612 227 117 3 316 531 103 329 7.79e-49 172
Msa0369720 MtrunA17_Chr4g0013821 44.800 250 112 3 25 249 27 275 1.15e-63 211
Msa0369720 MtrunA17_Chr4g0013821 40.196 204 112 3 335 531 124 324 1.60e-41 152
Msa0369720 MtrunA17_Chr2g0292261 46.586 249 108 3 25 248 28 276 1.67e-63 211
Msa0369720 MtrunA17_Chr2g0292261 44.298 228 114 5 316 531 104 330 6.03e-45 162
Msa0369720 MtrunA17_Chr2g0292181 44.800 250 113 2 25 249 37 286 4.66e-63 210
Msa0369720 MtrunA17_Chr2g0292181 42.982 228 117 4 316 531 113 339 1.07e-46 167
Msa0369720 MtrunA17_Chr5g0402571 41.637 281 131 6 25 279 26 299 1.06e-62 208
Msa0369720 MtrunA17_Chr5g0402571 39.744 234 125 4 313 531 94 326 6.18e-42 153
Msa0369720 MtrunA17_Chr2g0292271 41.219 279 137 3 1 254 6 282 2.90e-62 207
Msa0369720 MtrunA17_Chr2g0292271 45.789 190 94 2 351 531 141 330 1.56e-45 163
Msa0369720 MtrunA17_Chr2g0292111 44.000 250 115 2 25 249 28 277 3.79e-62 207
Msa0369720 MtrunA17_Chr2g0292111 39.922 258 127 5 290 531 85 330 1.05e-44 161
Msa0369720 MtrunA17_Chr2g0292101 43.629 259 121 3 16 249 15 273 1.83e-61 205
Msa0369720 MtrunA17_Chr2g0292101 45.026 191 96 3 350 531 136 326 8.89e-42 153
Msa0369720 MtrunA17_Chr5g0402581 41.727 278 129 6 25 272 26 300 3.29e-61 204
Msa0369720 MtrunA17_Chr5g0402581 41.463 205 111 3 335 531 123 326 1.13e-41 152
Msa0369720 MtrunA17_Chr4g0013721 41.481 270 131 4 24 267 98 366 3.69e-61 207
Msa0369720 MtrunA17_Chr4g0013721 42.647 204 107 3 335 531 196 396 1.72e-43 159
Msa0369720 MtrunA17_Chr2g0292241 42.966 263 124 3 25 261 28 290 3.84e-61 205
Msa0369720 MtrunA17_Chr2g0292241 42.982 228 117 4 316 531 104 330 8.24e-46 164
Msa0369720 MtrunA17_Chr2g0292291 44.223 251 114 4 25 249 29 279 1.10e-59 201
Msa0369720 MtrunA17_Chr2g0292291 40.254 236 124 4 313 531 97 332 2.55e-41 152
Msa0369720 MtrunA17_Chr5g0432401 41.455 275 95 6 6 258 13 243 3.92e-56 189
Msa0369720 MtrunA17_Chr5g0432401 34.875 281 145 9 283 530 10 285 5.32e-37 138
Msa0369720 MtrunA17_Chr5g0421411 43.089 246 112 5 53 270 8 253 6.02e-56 189
Msa0369720 MtrunA17_Chr5g0421411 40.670 209 112 5 335 531 77 285 4.36e-42 152
Msa0369720 MtrunA17_Chr7g0225221 36.749 283 155 5 20 279 19 300 4.83e-53 182
Msa0369720 MtrunA17_Chr7g0225221 38.525 244 135 4 295 531 85 320 8.65e-48 168
Msa0369720 MtrunA17_Chr1g0164891 40.310 258 125 5 30 258 93 350 8.37e-51 178
Msa0369720 MtrunA17_Chr1g0164891 35.321 218 131 3 324 531 175 392 2.02e-33 131
Msa0369720 MtrunA17_Chr1g0204011 40.149 269 125 8 6 248 14 272 3.91e-50 175
Msa0369720 MtrunA17_Chr1g0204011 38.235 204 116 4 335 531 122 322 1.23e-35 135
Msa0369720 MtrunA17_Chr2g0322861 38.376 271 135 7 5 249 70 334 3.15e-49 174
Msa0369720 MtrunA17_Chr2g0322861 39.320 206 116 3 335 531 181 386 5.54e-38 144
Msa0369720 MtrunA17_Chr3g0128061 37.319 276 144 5 6 254 8 281 3.97e-49 172
Msa0369720 MtrunA17_Chr3g0128061 36.842 190 112 2 350 531 137 326 4.35e-33 128
Msa0369720 MtrunA17_Chr1g0157051 36.900 271 137 7 6 250 9 271 4.71e-49 172
Msa0369720 MtrunA17_Chr1g0157051 42.289 201 103 5 335 527 119 314 1.64e-38 143
Msa0369720 MtrunA17_Chr1g0188431 35.889 287 156 8 5 270 20 299 1.66e-48 171
Msa0369720 MtrunA17_Chr1g0188431 38.767 227 127 5 313 531 105 327 1.94e-39 146
Msa0369720 MtrunA17_Chr4g0024121 38.235 272 137 5 4 249 9 275 1.97e-48 170
Msa0369720 MtrunA17_Chr4g0024121 39.024 205 117 2 335 531 122 326 5.68e-38 142
Msa0369720 MtrunA17_Chr7g0268501 35.842 279 154 4 1 256 1 277 5.90e-48 169
Msa0369720 MtrunA17_Chr7g0268501 38.235 204 116 3 335 531 120 320 1.72e-35 135
Msa0369720 MtrunA17_Chr7g0268521 35.842 279 154 4 1 256 1 277 5.90e-48 169
Msa0369720 MtrunA17_Chr7g0268521 38.235 204 116 3 335 531 120 320 1.72e-35 135
Msa0369720 MtrunA17_Chr6g0460711 36.842 247 129 5 25 248 20 262 1.57e-47 167
Msa0369720 MtrunA17_Chr6g0460711 33.663 202 126 3 335 531 116 314 6.97e-30 119
Msa0369720 MtrunA17_Chr1g0194151 35.145 276 147 4 6 252 13 285 2.19e-47 167
Msa0369720 MtrunA17_Chr1g0194151 37.113 194 113 2 347 531 140 333 6.16e-30 120
Msa0369720 MtrunA17_Chr7g0254201 36.940 268 138 7 25 268 21 281 3.30e-47 167
Msa0369720 MtrunA17_Chr7g0254201 33.663 202 125 3 335 531 115 312 1.06e-30 121
Msa0369720 MtrunA17_Chr6g0477071 37.643 263 140 7 6 249 34 291 7.85e-47 166
Msa0369720 MtrunA17_Chr6g0477071 41.414 198 111 5 335 531 149 342 1.94e-38 144
Msa0369720 MtrunA17_Chr2g0296621 38.846 260 126 7 16 250 40 291 2.18e-46 165
Msa0369720 MtrunA17_Chr2g0296621 37.500 224 120 8 323 531 123 341 9.91e-29 117
Msa0369720 MtrunA17_Chr8g0371381 37.154 253 130 6 24 250 24 273 3.13e-46 164
Msa0369720 MtrunA17_Chr8g0371381 39.614 207 107 6 335 531 121 319 2.76e-36 137
Msa0369720 MtrunA17_Chr5g0405991 37.319 276 141 9 1 250 1 270 2.35e-45 162
Msa0369720 MtrunA17_Chr5g0405991 41.546 207 103 7 335 531 118 316 2.00e-37 140
Msa0369720 MtrunA17_Chr2g0279041 36.131 274 142 6 6 254 10 275 1.12e-44 160
Msa0369720 MtrunA17_Chr2g0279041 34.286 245 128 5 298 531 103 325 1.22e-31 124
Msa0369720 MtrunA17_Chr1g0148021 38.462 260 131 5 25 256 26 284 7.73e-44 158
Msa0369720 MtrunA17_Chr1g0148021 41.176 204 113 1 335 531 125 328 5.29e-41 150
Msa0369720 MtrunA17_Chr1g0194271 33.922 283 148 4 6 252 13 292 9.87e-44 158
Msa0369720 MtrunA17_Chr1g0194271 34.328 201 116 2 347 531 140 340 2.04e-25 107
Msa0369720 MtrunA17_Chr6g0467251 36.604 265 144 6 6 248 14 276 1.33e-43 158
Msa0369720 MtrunA17_Chr6g0467251 37.113 194 119 3 335 527 133 324 1.86e-33 130
Msa0369720 MtrunA17_Chr4g0063671 36.567 268 138 5 25 267 20 280 4.15e-43 155
Msa0369720 MtrunA17_Chr4g0063671 33.971 209 125 3 335 531 113 320 4.70e-28 114
Msa0369720 MtrunA17_Chr7g0254231 36.090 266 140 7 25 267 21 279 3.70e-42 153
Msa0369720 MtrunA17_Chr7g0254231 33.333 198 128 3 335 531 117 311 2.97e-27 112
Msa0369720 MtrunA17_Chr4g0076211 38.367 245 118 6 31 250 46 282 5.57e-42 153
Msa0369720 MtrunA17_Chr4g0076211 37.073 205 117 4 335 531 133 333 3.53e-27 112
Msa0369720 MtrunA17_Chr6g0467161 35.766 274 147 7 2 250 17 286 6.76e-42 153
Msa0369720 MtrunA17_Chr6g0467161 40.984 183 105 3 350 531 156 336 6.95e-36 136
Msa0369720 MtrunA17_Chr4g0053871 36.680 259 137 5 25 258 26 282 9.20e-42 152
Msa0369720 MtrunA17_Chr4g0053871 35.039 254 141 3 287 527 78 320 1.25e-37 141
Msa0369720 MtrunA17_Chr4g0046131 35.827 254 134 5 24 248 40 293 1.01e-40 150
Msa0369720 MtrunA17_Chr4g0046131 39.583 192 106 4 346 527 151 342 1.32e-31 125
Msa0369720 MtrunA17_Chr5g0401431 36.364 253 133 5 25 249 26 278 1.08e-40 149
Msa0369720 MtrunA17_Chr5g0401431 34.746 236 136 3 313 530 93 328 1.01e-35 136
Msa0369720 MtrunA17_Chr4g0075241 30.970 268 159 4 6 248 9 275 1.95e-38 143
Msa0369720 MtrunA17_Chr4g0075241 31.383 188 123 2 350 531 140 327 1.03e-26 110
Msa0369720 MtrunA17_Chr6g0467121 34.323 303 162 10 4 275 44 340 4.19e-38 144
Msa0369720 MtrunA17_Chr6g0467121 37.158 183 112 3 350 531 183 363 1.24e-27 114
Msa0369720 MtrunA17_Chr6g0451571 32.721 272 153 6 5 250 17 284 5.17e-38 142
Msa0369720 MtrunA17_Chr6g0451571 36.410 195 118 2 343 531 140 334 8.76e-35 133
Msa0369720 MtrunA17_Chr8g0364291 33.200 250 140 4 23 245 20 269 5.84e-38 142
Msa0369720 MtrunA17_Chr8g0364291 35.122 205 125 2 335 531 120 324 2.33e-33 129
Msa0369720 MtrunA17_Chr2g0278671 36.000 250 132 5 23 248 21 266 8.53e-38 141
Msa0369720 MtrunA17_Chr2g0278671 32.692 208 128 3 335 531 117 323 3.06e-24 103
Msa0369720 MtrunA17_Chr2g0292281 41.053 190 93 5 351 531 37 216 6.51e-37 136
Msa0369720 MtrunA17_Chr2g0292281 43.066 137 61 4 120 249 37 163 6.99e-24 100
Msa0369720 MtrunA17_Chr4g0072091 36.641 262 139 6 25 259 23 284 2.16e-36 137
Msa0369720 MtrunA17_Chr4g0072091 38.235 204 119 2 335 531 120 323 5.34e-33 128
Msa0369720 MtrunA17_Chr1g0197411 30.952 252 146 5 25 248 27 278 8.50e-35 133
Msa0369720 MtrunA17_Chr1g0197411 30.901 233 144 4 316 531 98 330 1.39e-28 116
Msa0369720 MtrunA17_Chr5g0413051 35.907 259 134 8 23 250 70 327 1.43e-34 134
Msa0369720 MtrunA17_Chr5g0413051 37.838 185 102 6 359 531 194 377 8.50e-27 112
Msa0369720 MtrunA17_Chr1g0181511 31.600 250 147 4 22 248 23 271 5.12e-34 131
Msa0369720 MtrunA17_Chr1g0181511 32.710 214 136 3 326 531 110 323 7.42e-27 111
Msa0369720 MtrunA17_Chr1g0181431 32.000 250 146 5 22 248 23 271 3.71e-33 129
Msa0369720 MtrunA17_Chr1g0181431 32.243 214 137 4 326 531 110 323 2.89e-26 109
Msa0369720 MtrunA17_Chr1g0181481 32.800 250 144 5 22 248 23 271 3.97e-33 129
Msa0369720 MtrunA17_Chr1g0181481 32.710 214 136 4 326 531 110 323 1.25e-25 107
Msa0369720 MtrunA17_Chr5g0432321 51.282 117 56 1 129 245 17 132 1.13e-32 121
Msa0369720 MtrunA17_Chr5g0432321 52.137 117 55 1 360 476 17 132 2.45e-32 120
Msa0369720 MtrunA17_Chr2g0279061 34.694 245 127 5 298 531 44 266 1.85e-32 125
Msa0369720 MtrunA17_Chr2g0279061 36.667 210 103 5 70 254 12 216 2.89e-30 119
Msa0369720 MtrunA17_Chr3g0136751 31.481 270 154 3 8 250 7 272 2.21e-30 121
Msa0369720 MtrunA17_Chr3g0136751 34.466 206 126 1 335 531 117 322 1.77e-25 107
Msa0369720 MtrunA17_Chr2g0329641 30.451 266 149 6 23 258 33 292 4.17e-29 117
Msa0369720 MtrunA17_Chr2g0329641 29.665 209 133 3 335 531 129 335 8.83e-25 105
Msa0369720 MtrunA17_Chr4g0004591 28.214 280 148 5 303 530 77 355 2.12e-28 116
Msa0369720 MtrunA17_Chr4g0004591 26.295 251 137 5 26 249 77 306 6.21e-16 79.3
Msa0369720 MtrunA17_Chr2g0316481 29.682 283 143 6 21 248 72 353 5.65e-28 115
Msa0369720 MtrunA17_Chr2g0316831 28.975 283 145 6 21 248 108 389 3.10e-27 114
Msa0369720 MtrunA17_Chr2g0316791 28.975 283 145 6 21 248 72 353 4.96e-27 113
Msa0369720 MtrunA17_Chr2g0316191 28.521 284 146 6 21 248 72 354 1.99e-26 111
Msa0369720 MtrunA17_Chr4g0074851 30.435 276 153 8 6 248 7 276 2.78e-26 109
Msa0369720 MtrunA17_Chr4g0074851 32.020 203 123 5 335 527 127 324 1.88e-22 98.6
Msa0369720 MtrunA17_Chr1g0181501 33.158 190 121 4 347 531 1 189 8.56e-24 99.0
Msa0369720 MtrunA17_Chr1g0181501 33.088 136 85 4 118 248 3 137 4.76e-13 68.2
Msa0369720 MtrunA17_Chr2g0311251 28.571 287 142 9 21 249 7 288 6.04e-23 100
Msa0369720 MtrunA17_Chr2g0311251 27.517 298 167 7 282 530 42 339 9.22e-22 96.7
Msa0369720 MtrunA17_Chr3g0104101 40.426 141 72 5 403 531 9 149 2.66e-22 93.2
Msa0369720 MtrunA17_Chr3g0104101 39.535 86 44 3 172 249 9 94 3.50e-11 61.6
Msa0369720 MtrunA17_Chr2g0316811 35.465 172 91 3 21 173 46 216 3.02e-22 97.8
Msa0369720 MtrunA17_Chr2g0311241 28.440 218 119 4 350 530 212 429 7.92e-20 92.0
Msa0369720 MtrunA17_Chr2g0311241 41.593 113 63 2 21 133 56 165 2.59e-18 87.4
Msa0369720 MtrunA17_Chr5g0432361 45.161 93 48 2 440 530 17 108 6.65e-19 82.4
Msa0369720 MtrunA17_Chr4g0013811 52.055 73 35 0 350 422 6 78 1.85e-18 80.1
Msa0369720 MtrunA17_Chr4g0013811 49.333 75 38 0 117 191 4 78 1.62e-17 77.4
Msa0369720 MtrunA17_Chr2g0316141 28.972 214 132 5 337 530 64 277 6.09e-15 75.5
Msa0369720 MtrunA17_Chr2g0316181 28.972 214 132 5 337 530 64 277 6.09e-15 75.5
Msa0369720 MtrunA17_Chr1g0181491 37.838 111 67 2 23 133 9 117 8.46e-15 72.0
Msa0369720 MtrunA17_Chr4g0037131 32.738 168 77 5 350 513 108 243 1.31e-12 68.6
Msa0369720 MtrunA17_Chr7g0268491 40.964 83 48 1 449 531 16 97 1.86e-12 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0369720 AT5G05340.1 56.175 251 88 3 25 254 29 278 3.63e-90 280
Msa0369720 AT5G05340.1 51.500 200 93 2 335 531 126 324 1.72e-62 208
Msa0369720 AT5G58400.1 51.273 275 106 5 2 254 11 279 8.88e-77 245
Msa0369720 AT5G58400.1 45.333 225 113 3 317 531 101 325 2.75e-52 181
Msa0369720 AT5G58400.1 50.000 70 30 1 279 348 11 75 1.11e-12 69.7
Msa0369720 AT3G32980.1 48.029 279 115 5 11 263 20 294 4.23e-74 239
Msa0369720 AT3G32980.1 50.254 197 86 5 347 531 138 334 9.06e-50 175
Msa0369720 AT5G06720.1 47.292 277 118 5 5 255 13 287 5.79e-74 238
Msa0369720 AT5G06720.1 50.262 191 86 3 350 531 143 333 5.26e-52 180
Msa0369720 AT5G06720.1 33.835 133 81 4 283 411 13 142 6.65e-11 64.3
Msa0369720 AT5G58390.1 50.929 269 107 4 7 254 6 270 8.88e-74 237
Msa0369720 AT5G58390.1 51.000 200 95 2 335 531 117 316 1.22e-55 189
Msa0369720 AT4G08770.1 49.057 265 109 4 25 263 23 287 2.28e-73 237
Msa0369720 AT4G08770.1 47.596 208 98 3 335 531 120 327 3.47e-51 179
Msa0369720 AT2G18140.1 43.772 281 133 2 6 261 15 295 3.71e-72 233
Msa0369720 AT2G18140.1 49.756 205 95 2 335 531 131 335 5.21e-57 194
Msa0369720 AT5G06730.1 44.086 279 128 5 3 255 12 288 6.30e-72 233
Msa0369720 AT5G06730.1 45.550 191 95 3 350 531 144 334 2.93e-48 171
Msa0369720 AT5G06730.1 32.090 134 84 4 282 411 13 143 8.28e-11 64.3
Msa0369720 AT3G49110.1 48.485 264 110 4 25 262 32 295 8.68e-72 233
Msa0369720 AT3G49110.1 46.635 208 100 4 335 531 129 336 1.21e-47 169
Msa0369720 AT4G36430.1 44.981 269 120 3 30 270 34 302 3.62e-71 231
Msa0369720 AT4G36430.1 47.768 224 102 3 323 531 107 330 2.31e-58 197
Msa0369720 AT2G38390.1 44.097 288 134 4 10 270 15 302 5.19e-71 231
Msa0369720 AT2G38390.1 46.875 192 92 3 350 531 142 333 2.12e-47 169
Msa0369720 AT2G18150.1 45.455 264 119 2 23 261 33 296 6.60e-71 230
Msa0369720 AT2G18150.1 50.244 205 94 2 335 531 132 336 1.86e-58 197
Msa0369720 AT4G08780.1 45.296 287 125 5 25 280 23 308 7.06e-70 228
Msa0369720 AT4G08780.1 43.750 208 106 3 335 531 120 327 1.29e-45 164
Msa0369720 AT3G49120.1 47.727 264 112 4 25 262 31 294 2.96e-69 226
Msa0369720 AT3G49120.1 47.668 193 90 4 350 531 143 335 8.10e-45 162
Msa0369720 AT1G14540.1 41.958 286 141 4 3 267 2 283 8.57e-69 224
Msa0369720 AT1G14540.1 43.216 199 111 2 335 531 117 315 1.25e-48 171
Msa0369720 AT2G38380.1 47.619 252 106 3 25 250 30 281 2.55e-68 224
Msa0369720 AT2G38380.1 46.875 192 92 3 350 531 142 333 7.62e-49 172
Msa0369720 AT5G66390.1 45.736 258 115 2 26 258 33 290 4.05e-68 223
Msa0369720 AT5G66390.1 48.095 210 101 2 330 531 124 333 3.08e-53 184
Msa0369720 AT3G50990.1 45.055 273 122 3 26 270 41 313 1.28e-67 222
Msa0369720 AT3G50990.1 47.321 224 103 3 323 531 118 341 9.11e-53 182
Msa0369720 AT5G19890.1 47.431 253 104 4 23 250 27 275 1.13e-66 219
Msa0369720 AT5G19890.1 34.983 303 124 7 300 531 27 327 1.12e-44 160
Msa0369720 AT1G14550.1 42.909 275 133 4 4 258 8 278 1.83e-65 215
Msa0369720 AT1G14550.1 45.000 200 107 3 335 531 122 321 4.70e-47 167
Msa0369720 AT1G44970.1 48.016 252 104 3 30 254 49 300 4.36e-65 215
Msa0369720 AT1G44970.1 47.573 206 99 2 335 531 141 346 2.03e-47 168
Msa0369720 AT2G35380.1 46.324 272 118 3 5 248 9 280 7.02e-65 214
Msa0369720 AT2G35380.1 44.286 210 104 2 335 531 126 335 2.73e-45 162
Msa0369720 AT2G22420.1 42.279 272 122 4 4 250 10 271 7.66e-64 211
Msa0369720 AT2G22420.1 41.667 204 109 3 335 531 119 319 2.98e-45 162
Msa0369720 AT4G16270.1 44.528 265 110 3 21 248 33 297 2.69e-63 211
Msa0369720 AT4G16270.1 41.880 234 119 4 313 531 117 348 6.70e-43 156
Msa0369720 AT1G49570.1 46.154 247 105 4 30 248 52 298 1.23e-61 206
Msa0369720 AT1G49570.1 39.901 203 112 3 335 527 144 346 3.73e-35 135
Msa0369720 AT1G68850.1 41.502 253 119 5 26 250 30 281 6.94e-57 193
Msa0369720 AT1G68850.1 42.180 211 107 6 335 531 126 335 1.32e-40 150
Msa0369720 AT5G19880.1 39.474 266 132 4 25 261 24 289 2.90e-52 181
Msa0369720 AT5G19880.1 40.104 192 105 2 350 531 138 329 5.26e-39 145
Msa0369720 AT4G33420.1 40.800 250 124 6 26 256 37 281 6.27e-50 174
Msa0369720 AT4G33420.1 41.414 198 111 4 335 531 132 325 1.02e-38 144
Msa0369720 AT4G33420.2 40.800 250 124 6 26 256 84 328 2.19e-49 174
Msa0369720 AT4G33420.2 41.414 198 111 4 335 531 179 372 2.67e-38 144
Msa0369720 AT3G03670.1 36.397 272 139 4 25 263 22 292 2.39e-49 173
Msa0369720 AT3G03670.1 39.153 189 108 1 350 531 133 321 2.65e-37 140
Msa0369720 AT5G51890.1 38.971 272 132 8 5 249 9 273 7.52e-49 172
Msa0369720 AT5G51890.1 35.802 243 122 8 298 531 105 322 1.40e-35 135
Msa0369720 AT1G71695.1 36.992 246 132 5 26 249 44 288 1.53e-47 169
Msa0369720 AT1G71695.1 40.000 200 116 3 335 531 141 339 8.07e-39 145
Msa0369720 AT2G35380.2 44.286 210 104 2 335 531 38 247 3.87e-46 162
Msa0369720 AT2G35380.2 46.597 191 74 3 86 248 2 192 3.51e-42 151
Msa0369720 AT2G41480.1 35.273 275 147 5 1 250 5 273 6.01e-46 164
Msa0369720 AT2G41480.1 36.364 209 120 3 335 531 121 328 4.81e-34 131
Msa0369720 AT5G40150.1 35.458 251 140 4 22 250 28 278 8.36e-46 164
Msa0369720 AT5G40150.1 38.000 200 121 2 335 531 129 328 1.41e-37 141
Msa0369720 AT4G11290.1 35.821 268 144 4 7 248 8 273 1.23e-45 163
Msa0369720 AT4G11290.1 38.350 206 118 3 335 531 121 326 2.80e-34 132
Msa0369720 AT1G05240.1 36.400 250 131 4 26 250 26 272 1.38e-45 163
Msa0369720 AT1G05240.1 39.901 203 111 3 335 527 120 321 3.52e-36 137
Msa0369720 AT1G05250.1 36.400 250 131 4 26 250 26 272 1.38e-45 163
Msa0369720 AT1G05250.1 39.901 203 111 3 335 527 120 321 3.52e-36 137
Msa0369720 AT5G42180.1 36.585 287 147 9 6 266 8 285 1.87e-45 162
Msa0369720 AT5G42180.1 41.176 204 107 6 335 530 118 316 1.52e-37 141
Msa0369720 AT3G21770.1 37.698 252 125 7 25 248 28 275 4.05e-45 162
Msa0369720 AT3G21770.1 42.157 204 105 6 335 527 123 324 4.08e-37 140
Msa0369720 AT1G05260.1 36.800 250 130 4 25 248 25 272 9.02e-45 160
Msa0369720 AT1G05260.1 35.776 232 133 4 316 531 94 325 1.57e-32 127
Msa0369720 AT3G01190.1 37.175 269 134 7 7 250 12 270 1.25e-44 160
Msa0369720 AT3G01190.1 36.098 205 120 4 335 531 120 321 1.06e-29 119
Msa0369720 AT5G15180.1 34.657 277 148 6 1 250 8 278 2.91e-44 159
Msa0369720 AT5G15180.1 39.024 205 116 3 335 531 126 329 1.86e-36 138
Msa0369720 AT5G14130.1 35.145 276 147 6 5 254 15 284 3.45e-44 159
Msa0369720 AT5G14130.1 33.333 231 137 3 317 531 101 330 9.01e-35 134
Msa0369720 AT5G64120.1 34.586 266 145 5 8 249 17 277 6.94e-44 158
Msa0369720 AT5G64120.1 34.975 203 125 2 335 531 127 328 6.17e-34 131
Msa0369720 AT5G14130.2 34.783 276 148 6 5 254 56 325 8.91e-44 159
Msa0369720 AT5G14130.2 35.294 204 124 2 335 531 169 371 2.65e-34 133
Msa0369720 AT4G37530.2 36.364 253 133 5 25 249 26 278 1.23e-43 156
Msa0369720 AT4G37530.2 39.869 153 85 2 335 480 126 278 8.72e-27 110
Msa0369720 AT4G37530.1 36.364 253 133 5 25 249 26 278 4.68e-43 156
Msa0369720 AT4G37530.1 38.235 204 119 2 335 531 126 329 3.73e-36 137
Msa0369720 AT5G17820.1 34.559 272 135 7 25 263 23 284 1.12e-42 155
Msa0369720 AT5G17820.1 35.294 204 119 3 335 531 116 313 4.89e-34 131
Msa0369720 AT5G67400.1 35.461 282 152 5 3 254 2 283 3.30e-42 154
Msa0369720 AT5G67400.1 36.275 204 123 1 335 531 126 329 1.88e-33 130
Msa0369720 AT1G30870.1 37.600 250 123 5 24 248 49 290 7.84e-42 153
Msa0369720 AT1G30870.1 37.949 195 107 6 347 531 155 345 7.40e-27 112
Msa0369720 AT5G17820.2 34.926 272 134 7 25 263 76 337 8.37e-42 154
Msa0369720 AT5G17820.2 35.784 204 118 3 335 531 169 366 2.49e-33 130
Msa0369720 AT4G37520.2 36.000 250 135 5 25 249 26 275 1.48e-41 152
Msa0369720 AT4G37520.2 38.095 189 110 2 350 531 138 326 7.03e-33 128
Msa0369720 AT3G28200.1 33.200 250 146 4 22 250 17 266 1.96e-41 151
Msa0369720 AT3G28200.1 34.171 199 129 2 335 531 118 316 1.57e-31 124
Msa0369720 AT4G37520.1 35.573 253 135 5 25 249 26 278 5.13e-41 150
Msa0369720 AT4G37520.1 36.765 204 122 2 335 531 126 329 2.25e-33 130
Msa0369720 AT2G18980.1 36.332 289 144 8 7 265 12 290 6.10e-41 150
Msa0369720 AT2G18980.1 38.235 204 119 1 335 531 120 323 1.60e-36 138
Msa0369720 AT4G30170.1 36.842 266 142 6 25 264 26 291 8.34e-41 150
Msa0369720 AT4G30170.1 36.765 204 122 1 335 531 122 325 3.48e-36 137
Msa0369720 AT3G49960.1 36.047 258 137 6 25 254 26 283 4.66e-40 148
Msa0369720 AT3G49960.1 36.275 204 123 3 335 531 126 329 7.36e-32 125
Msa0369720 AT1G24110.1 31.879 298 171 6 1 270 1 294 1.71e-39 146
Msa0369720 AT1G24110.1 36.316 190 114 2 349 531 133 322 6.32e-31 123
Msa0369720 AT4G26010.1 31.229 301 161 9 6 275 8 293 6.15e-39 144
Msa0369720 AT4G26010.1 34.848 198 123 4 335 531 117 309 1.46e-28 115
Msa0369720 AT4G26010.2 31.229 301 161 9 6 275 36 321 9.56e-39 145
Msa0369720 AT4G26010.2 34.848 198 123 4 335 531 145 337 2.22e-28 116
Msa0369720 AT2G34060.1 37.891 256 128 7 24 249 40 294 1.80e-38 144
Msa0369720 AT2G34060.1 39.378 193 107 4 346 528 151 343 3.04e-29 119
Msa0369720 AT5G47000.1 32.877 292 168 7 5 270 13 302 1.96e-38 144
Msa0369720 AT5G47000.1 29.804 255 161 5 287 531 84 330 6.06e-29 117
Msa0369720 AT1G77100.1 36.179 246 134 5 25 250 23 265 1.66e-37 141
Msa0369720 AT1G77100.1 33.990 203 127 4 335 531 118 319 1.10e-25 108
Msa0369720 AT5G64110.1 36.032 247 127 5 28 249 36 276 5.65e-37 140
Msa0369720 AT5G64110.1 33.333 234 135 6 316 531 100 330 2.37e-25 107
Msa0369720 AT4G25980.1 33.600 250 137 5 26 250 26 271 6.26e-37 139
Msa0369720 AT4G25980.1 29.386 228 141 4 323 531 100 326 4.75e-23 100
Msa0369720 AT5G39580.1 34.201 269 145 7 6 249 7 268 6.48e-37 139
Msa0369720 AT5G39580.1 31.950 241 135 5 298 531 101 319 2.68e-27 112
Msa0369720 AT1G34510.1 31.868 273 154 7 1 254 4 263 2.49e-36 137
Msa0369720 AT1G34510.1 30.876 217 137 5 323 531 98 309 4.67e-26 108
Msa0369720 AT2G39040.1 33.969 262 144 3 17 249 37 298 2.75e-36 138
Msa0369720 AT2G39040.1 32.950 261 155 7 284 531 97 350 3.27e-26 110
Msa0369720 AT4G33870.1 29.316 307 152 7 16 261 58 360 9.19e-36 138
Msa0369720 AT4G33870.1 30.682 264 132 5 316 529 137 399 6.52e-28 116
Msa0369720 AT5G22410.1 33.858 254 135 7 22 248 26 273 3.60e-35 135
Msa0369720 AT5G22410.1 28.646 192 118 6 350 528 137 322 7.91e-17 82.4
Msa0369720 AT5G64100.1 34.146 246 129 6 30 250 41 278 8.00e-35 134
Msa0369720 AT5G64100.1 33.333 207 124 4 335 531 129 331 2.11e-26 110
Msa0369720 AT4G17690.1 33.333 252 144 5 26 254 26 276 4.87e-33 129
Msa0369720 AT4G17690.1 29.921 254 161 5 287 531 77 322 6.46e-26 108
Msa0369720 AT2G24800.1 34.884 258 126 5 25 249 30 278 6.01e-33 129
Msa0369720 AT2G24800.1 33.962 212 120 3 335 531 123 329 1.96e-26 110
Msa0369720 AT4G31760.1 34.661 251 133 4 26 249 29 275 6.89e-33 128
Msa0369720 AT4G31760.1 32.039 206 131 1 335 531 121 326 5.14e-27 112
Msa0369720 AT2G37130.1 32.669 251 144 5 22 248 26 275 2.48e-31 124
Msa0369720 AT2G37130.1 30.693 303 167 7 251 531 46 327 3.05e-29 118
Msa0369720 AT3G17070.1 32.130 277 157 7 2 248 12 287 4.64e-31 123
Msa0369720 AT3G17070.1 33.171 205 126 4 337 531 136 339 8.59e-26 108
Msa0369720 AT2G37130.2 32.377 244 140 5 29 248 2 244 7.78e-30 119
Msa0369720 AT2G37130.2 34.862 218 133 4 323 531 79 296 1.78e-29 118
Msa0369720 AT4G21960.1 32.472 271 147 8 8 248 11 275 2.04e-29 119
Msa0369720 AT4G21960.1 34.921 189 108 5 349 527 140 323 2.47e-24 104
Msa0369720 AT5G24070.1 31.071 280 152 10 6 250 12 285 1.46e-26 110
Msa0369720 AT5G24070.1 31.140 228 136 7 323 531 110 335 2.47e-22 98.6
Msa0369720 AT3G17070.2 32.850 207 128 4 335 531 71 276 3.88e-26 108
Msa0369720 AT3G17070.2 31.579 209 113 6 68 248 18 224 3.69e-20 91.3
Msa0369720 AT2G43480.1 26.552 290 166 7 1 249 1 284 3.17e-25 107
Msa0369720 AT2G43480.1 27.273 209 138 3 335 531 129 335 5.93e-21 94.7
Msa0369720 AT5G39580.2 31.674 221 122 6 6 208 7 216 1.87e-24 102
Msa0369720 AT4G25980.2 35.714 168 86 4 26 175 71 234 1.64e-23 100
Msa0369720 AT2G24800.2 34.731 167 87 2 25 173 30 192 4.47e-19 87.0

Find 128 sgRNAs with CRISPR-Local

Find 339 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACATTGTCATTTCCACTTC+TGG 0.104036 3_1:+67031164 None:intergenic
AACATTGTCGTTTCCACTTC+TGG 0.115473 3_1:+67027952 None:intergenic
GAGGACTTGGTGGCTCTTTC+AGG 0.143018 3_1:-67031436 Msa0369720:intron
AAGGACTTGGTGGCTCTTTC+AGG 0.146777 3_1:-67028219 Msa0369720:intron
AAATTCTCAATTTCCTAATT+AGG 0.159366 3_1:+67027400 None:intergenic
CAAGAATTTACTAGCTAAAA+AGG 0.215677 3_1:-67027879 Msa0369720:CDS
CCCTTGATTACAACCTAATT+AGG 0.219088 3_1:-67027413 Msa0369720:three_prime_UTR
TATGCGAGTTTCTTTCTTAA+TGG 0.222413 3_1:+67029198 None:intergenic
CAAGAATTTACTAGCTAAAA+AGG 0.225103 3_1:-67031091 Msa0369720:CDS
GACCAAGAGTTGTTCAATAT+TGG 0.252796 3_1:-67031054 Msa0369720:CDS
ATAAACATGAAGGATGAAAT+TGG 0.272753 3_1:+67032708 None:intergenic
CTAGTAAATTCTTGAAGTAT+AGG 0.325478 3_1:+67027888 None:intergenic
CTAGTAAATTCTTGAAGTAT+AGG 0.325478 3_1:+67031100 None:intergenic
GGGTGCTGGAATTGAGTTAT+TGG 0.333191 3_1:+67031513 None:intergenic
TACGTAAAAGCAATTCAAAT+TGG 0.340851 3_1:-67032782 Msa0369720:five_prime_UTR
GAGAGTGCTTAGATTCATAA+AGG 0.342825 3_1:+67028275 None:intergenic
GGGTGCAGGAATTGAGTTAT+TGG 0.349043 3_1:+67028296 None:intergenic
TTCACTATAGACAACAGTTC+CGG 0.373371 3_1:+67032511 None:intergenic
AGATAGTGTAATTAATTGTC+AGG 0.374172 3_1:-67027451 Msa0369720:three_prime_UTR
TCCTAATTAGGTTGTAATCA+AGG 0.375001 3_1:+67027412 None:intergenic
TGGAAGCTCTACTGATAATC+TGG 0.379903 3_1:-67027825 Msa0369720:CDS
TACAGCTAGGAGGCCCTTCA+TGG 0.385396 3_1:-67028368 Msa0369720:intron
ACATTGTCATTTCCACTTCT+GGG 0.391311 3_1:+67031165 None:intergenic
ACATTGTCGTTTCCACTTCT+GGG 0.395378 3_1:+67027953 None:intergenic
TACAGCTAGGAGGCCCTTCA+TGG 0.398807 3_1:-67031585 Msa0369720:intron
AGTCCTTAGCTGAGAGGCCT+TGG 0.400121 3_1:+67028235 None:intergenic
TGGAAGTTCTACTAATAATC+TGG 0.403475 3_1:-67031034 Msa0369720:intron
TAATGGCATTTATGACTCCT+TGG 0.408894 3_1:+67029215 None:intergenic
CCAGCACCCTTTCTCAATCT+AGG 0.413027 3_1:-67031499 Msa0369720:CDS
GATGATACAAGCAGTTTCAT+AGG 0.416762 3_1:-67032284 Msa0369720:CDS
CCCTTCATGGGATGTAGGCT+TGG 0.421379 3_1:-67031572 Msa0369720:CDS
TTCCAATATTGAACAACTCT+TGG 0.421834 3_1:+67031052 None:intergenic
AGGGCTCTCAGTTGAGGACT+TGG 0.425051 3_1:-67031449 Msa0369720:CDS
TCCTCTAGCTGAATTATTGT+TGG 0.430062 3_1:+67032244 None:intergenic
GGGATTCAATCACAGCTAGT+AGG 0.433896 3_1:-67028326 Msa0369720:CDS
GGGATTCAATCACAGCTAGT+AGG 0.433896 3_1:-67031543 Msa0369720:CDS
CCCTTCATGGAATGTAGGCT+TGG 0.437782 3_1:-67028355 Msa0369720:CDS
CAAAATGAGTCGGTGTTTGA+TGG 0.444016 3_1:+67027915 None:intergenic
TCACTATAGACAACAGTTCC+GGG 0.444339 3_1:+67032512 None:intergenic
GGGATGTAGGCTTGGGAAGA+AGG 0.448719 3_1:-67031564 Msa0369720:CDS
GAGAGCACCTAGATTGAGAA+AGG 0.455148 3_1:+67031492 None:intergenic
CCTAATTAGGTTGTAATCAA+GGG 0.455422 3_1:+67027413 None:intergenic
TGAACAACTCTTGGTCTGAA+TGG 0.456022 3_1:+67031061 None:intergenic
TGTTCTCTATATAGCTTACA+TGG 0.456264 3_1:-67029362 Msa0369720:CDS
TTCACTATAGACAACAGTTC+CGG 0.457196 3_1:+67029238 None:intergenic
CAGCAACAAGAACAAATAAG+AGG 0.458381 3_1:+67029326 None:intergenic
GGAATGTAGGCTTGGGAAGA+AGG 0.468250 3_1:-67028347 Msa0369720:CDS
TTGTCCATTGCTTCCTGTGA+GGG 0.470094 3_1:+67027724 None:intergenic
TAAAGCCTTTGCCAAGGGTA+TGG 0.475959 3_1:-67027768 Msa0369720:CDS
AAGCAACAAGAACAATTAAG+AGG 0.476569 3_1:+67032599 None:intergenic
ATATCAGGTGCACATACAAT+TGG 0.478538 3_1:-67031276 Msa0369720:intron
AGAGTGCTTAGATTCATAAA+GGG 0.480504 3_1:+67028276 None:intergenic
GGTTCTTCTCCATTCAGATC+AGG 0.483284 3_1:-67027858 Msa0369720:CDS
CCTTCATGGGATGTAGGCTT+GGG 0.484592 3_1:-67031571 Msa0369720:CDS
TGAATAGCTCCTGATCTGAA+TGG 0.484938 3_1:+67027849 None:intergenic
GCTCTCAGTTGAGGACTTGG+TGG 0.486682 3_1:-67031446 Msa0369720:CDS
TAAGAGCATTTACGACTCCT+TGG 0.486870 3_1:+67032488 None:intergenic
ATAACAGGTGCACATACAAT+TGG 0.496578 3_1:-67028064 Msa0369720:intron
CCTTCATGGAATGTAGGCTT+GGG 0.499877 3_1:-67028354 Msa0369720:CDS
CTTCTACTGCAGCAGCTGTC+CGG 0.501343 3_1:-67029257 Msa0369720:CDS
CCTCTCAGCTAAGGACTTGG+TGG 0.509614 3_1:-67028229 Msa0369720:CDS
CAAAACAAGTGCCCCAGAAG+TGG 0.514491 3_1:-67027965 Msa0369720:CDS
CAAAACAAGTGCCCCAGAAG+TGG 0.514491 3_1:-67031177 Msa0369720:CDS
GGAGGCCCTTCATGGGATGT+AGG 0.516630 3_1:-67031577 Msa0369720:CDS
AGGCCTCTCAGCTAAGGACT+TGG 0.517418 3_1:-67028232 Msa0369720:CDS
TCAGATCAGGAGCTATTCAA+TGG 0.519217 3_1:-67027845 Msa0369720:CDS
TTGTAGAGACTTTCTATACA+AGG 0.526476 3_1:+67027985 None:intergenic
CTTAGATTCATAAAGGGTGC+AGG 0.528162 3_1:+67028282 None:intergenic
CTTCTACTGCAGCAGCTGCC+CGG 0.529821 3_1:-67032530 Msa0369720:CDS
GGAGGCCCTTCATGGAATGT+AGG 0.532058 3_1:-67028360 Msa0369720:CDS
CCCAAGCCTACATTCCATGA+AGG 0.533028 3_1:+67028354 None:intergenic
AGTCCTCAACTGAGAGCCCT+TGG 0.538010 3_1:+67031452 None:intergenic
CCCAAGCCTACATCCCATGA+AGG 0.538878 3_1:+67031571 None:intergenic
GGGGCATGATTTCTCCACAC+TGG 0.540613 3_1:+67032196 None:intergenic
AGTCGGTGTTTGATGGTCGA+GGG 0.544407 3_1:+67027922 None:intergenic
GGATGTAGGCTTGGGAAGAA+GGG 0.547053 3_1:-67031563 Msa0369720:CDS
TCTATACAAGGGGTCGACAT+TGG 0.551386 3_1:+67027997 None:intergenic
GTTCTCTATAGCTTCTTACA+TGG 0.554349 3_1:-67032635 Msa0369720:exon
CATTGTCGTTTCCACTTCTG+GGG 0.558904 3_1:+67027954 None:intergenic
TGTCCATTGCTTCCTGTGAG+GGG 0.559457 3_1:+67027725 None:intergenic
TTTGACCATACCCTTGGCAA+AGG 0.562288 3_1:+67027763 None:intergenic
CATTGTCATTTCCACTTCTG+GGG 0.563012 3_1:+67031166 None:intergenic
GGATTCAATCACAGCTAGTA+GGG 0.564451 3_1:-67028325 Msa0369720:CDS
GGATTCAATCACAGCTAGTA+GGG 0.564451 3_1:-67031542 Msa0369720:CDS
GAGTCGGTGTTTGATGGTCG+AGG 0.565121 3_1:+67027921 None:intergenic
CCTAGATTGAGAAAGGGTGC+TGG 0.565170 3_1:+67031499 None:intergenic
TCACGTTTACAAAGCAGTCA+TGG 0.565557 3_1:+67029149 None:intergenic
ATCATTTGACAAGACTAGCA+TGG 0.568907 3_1:-67032815 Msa0369720:five_prime_UTR
AAACCCCTCACAGGAAGCAA+TGG 0.570558 3_1:-67027728 Msa0369720:CDS
GATAGTGTAATTAATTGTCA+GGG 0.571468 3_1:-67027450 Msa0369720:three_prime_UTR
TAACCAAGGCCTCTCAGCTA+AGG 0.582422 3_1:-67028238 Msa0369720:CDS
TTGTAGAGACTTTCTAAACA+AGG 0.582654 3_1:+67031197 None:intergenic
AGTAGCATCAAACCCCTCAC+AGG 0.582667 3_1:-67027737 Msa0369720:CDS
TGTAGAGACTTTCTATACAA+GGG 0.584213 3_1:+67027986 None:intergenic
TGTAGAGACTTTCTAAACAA+GGG 0.584213 3_1:+67031198 None:intergenic
AGTCGGTGTTTGATAGTCGA+GGG 0.584764 3_1:+67031134 None:intergenic
GAATGTAGGCTTGGGAAGAA+GGG 0.585276 3_1:-67028346 Msa0369720:CDS
CTGCTGCAGTAGAAGTCTGT+AGG 0.587539 3_1:+67029265 None:intergenic
AGAGCACCTAGATTGAGAAA+GGG 0.588529 3_1:+67031493 None:intergenic
CTGTGACGCATCGATTCTGT+TGG 0.589559 3_1:-67032306 Msa0369720:CDS
ACAGCTAGGAGGCCCTTCAT+GGG 0.592407 3_1:-67031584 Msa0369720:intron
TAACCAAGGGCTCTCAGTTG+AGG 0.592954 3_1:-67031455 Msa0369720:CDS
GTACTAATTAATAAACATGA+AGG 0.593115 3_1:+67032698 None:intergenic
GTAGAGACTTTCTATACAAG+GGG 0.593968 3_1:+67027987 None:intergenic
GTAGAGACTTTCTAAACAAG+GGG 0.593968 3_1:+67031199 None:intergenic
GCCAACAATAATTCAGCTAG+AGG 0.597481 3_1:-67032245 Msa0369720:CDS
CCAAGCCTACATTCCATGAA+GGG 0.598974 3_1:+67028355 None:intergenic
TACTAGTACTATAAAAGAGA+AGG 0.599512 3_1:-67029406 Msa0369720:intron
GTCAAATGATAAAAGTTATG+TGG 0.601120 3_1:+67032828 None:intergenic
TGTTGGAATTTACAGCTAGG+AGG 0.611020 3_1:-67028378 Msa0369720:intron
TGTTGGAATTTACAGCTAGG+AGG 0.611020 3_1:-67031595 Msa0369720:intron
TTTGTCCATTGCTTCCTGTG+AGG 0.611149 3_1:+67027723 None:intergenic
CCAAGCCTACATCCCATGAA+GGG 0.612588 3_1:+67031572 None:intergenic
AGTACTACATATATAAGAGA+AGG 0.619799 3_1:-67032680 Msa0369720:five_prime_UTR
TCACATTTACAAAGCAGTCG+TGG 0.627284 3_1:+67032422 None:intergenic
TCTGCAATATCTGAAGCAGA+TGG 0.628991 3_1:-67032574 Msa0369720:CDS
GTCGGTGTTTGATGGTCGAG+GGG 0.631377 3_1:+67027923 None:intergenic
CCACCAAGTCCTTAGCTGAG+AGG 0.638173 3_1:+67028229 None:intergenic
TCTAAACAAGGGGTCAACGT+TGG 0.638866 3_1:+67031209 None:intergenic
GAGTCGGTGTTTGATAGTCG+AGG 0.639212 3_1:+67031133 None:intergenic
TATAGGTTATCAAAATGAGT+CGG 0.643577 3_1:+67027905 None:intergenic
GTCGGTGTTTGATAGTCGAG+GGG 0.646321 3_1:+67031135 None:intergenic
ATTAAGAAAGAAACTCGCAT+AGG 0.651906 3_1:-67029196 Msa0369720:CDS
TATAGGTTATCGAAATGAGT+CGG 0.655911 3_1:+67031117 None:intergenic
TGTGGAGAAATCATGCCCCA+AGG 0.668608 3_1:-67032192 Msa0369720:intron
CTGTTGTCTATAGTGAACCA+AGG 0.680644 3_1:-67029232 Msa0369720:CDS
CTGTTGTCTATAGTGAACCA+AGG 0.680644 3_1:-67032505 Msa0369720:CDS
TGATGATATCAAAGCCAGTG+TGG 0.742684 3_1:-67032210 Msa0369720:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATAGTTAAAAAATATAACA+AGG - chr3_1:67028253-67028272 Msa0369720:CDS 10.0%
!!! TTCAAATAAACATAATTTTT+AGG - chr3_1:67028351-67028370 Msa0369720:CDS 10.0%
!! AGATTTAATTAATCTATAAA+GGG - chr3_1:67028649-67028668 Msa0369720:intron 10.0%
!! ATGAATATGATTATATTATA+TGG + chr3_1:67030061-67030080 None:intergenic 10.0%
!! TGAATATAATAATAAACTAA+AGG + chr3_1:67030458-67030477 None:intergenic 10.0%
!!! TGGTTTATTTTATTTATAAA+GGG - chr3_1:67031866-67031885 Msa0369720:intron 10.0%
!! AGTAAACATTAAAAATTCTT+AGG + chr3_1:67027536-67027555 None:intergenic 15.0%
!!! ACACATTTTAAATATTTATG+TGG - chr3_1:67028216-67028235 Msa0369720:intron 15.0%
!! AATTAAATCTCTCTAATTAA+GGG + chr3_1:67028639-67028658 None:intergenic 15.0%
!! TAATTAAATCTCTCTAATTA+AGG + chr3_1:67028640-67028659 None:intergenic 15.0%
!! GAGATTTAATTAATCTATAA+AGG - chr3_1:67028648-67028667 Msa0369720:intron 15.0%
!! AAAAATGATACAATATCATT+AGG + chr3_1:67029475-67029494 None:intergenic 15.0%
!!! ATATTGTATCATTTTTCATT+AGG - chr3_1:67029479-67029498 Msa0369720:intron 15.0%
!! AATATGATTATATTATATGG+AGG + chr3_1:67030058-67030077 None:intergenic 15.0%
!!! GTGGTTTATTTTATTTATAA+AGG - chr3_1:67031865-67031884 Msa0369720:intron 15.0%
!! TTTATTTATAAAGGGTTATA+TGG - chr3_1:67031874-67031893 Msa0369720:intron 15.0%
!! AAAAAAGATACAATATCATT+AGG + chr3_1:67032684-67032703 None:intergenic 15.0%
!!! ATATTGTATCTTTTTTCATT+AGG - chr3_1:67032688-67032707 Msa0369720:five_prime_UTR 15.0%
!! GTACTAATTAATAAACATGA+AGG + chr3_1:67027581-67027600 None:intergenic 20.0%
!! AACACTAGAATGAAAAAAAT+TGG + chr3_1:67027624-67027643 None:intergenic 20.0%
!!! TCGTAGTTAATTTTGTTTTA+TGG + chr3_1:67028299-67028318 None:intergenic 20.0%
!! AATTATGTTTATTTGAACAC+TGG + chr3_1:67028348-67028367 None:intergenic 20.0%
!! GATGTTTAATGAATATAACA+AGG + chr3_1:67028493-67028512 None:intergenic 20.0%
!! TTAATCTATAAAGGGTTAAA+TGG - chr3_1:67028657-67028676 Msa0369720:intron 20.0%
!!! AATCATGATAAAGCATTAAT+AGG + chr3_1:67028878-67028897 None:intergenic 20.0%
!! AAATTCTCAATTTCCTAATT+AGG + chr3_1:67029661-67029680 None:intergenic 20.0%
!! AAGATGTAAAAGTTTAACAA+AGG - chr3_1:67029732-67029751 Msa0369720:intron 20.0%
!! AGATGTAAAAGTTTAACAAA+GGG - chr3_1:67029733-67029752 Msa0369720:intron 20.0%
!!! TTTTGCTTTTATTATCCTAT+AGG + chr3_1:67030211-67030230 None:intergenic 20.0%
!! AATCAATATCATATTGTGAT+AGG + chr3_1:67030315-67030334 None:intergenic 20.0%
!!! AATATACCACAAGTTTTTTT+TGG - chr3_1:67030716-67030735 Msa0369720:intron 20.0%
!! TACGTAAAAGTAATTCAAAT+TGG - chr3_1:67030798-67030817 Msa0369720:intron 20.0%
!! AAGTAATTCAAATTGGATAT+TGG - chr3_1:67030805-67030824 Msa0369720:intron 20.0%
!! AACACAAAAATGAACAAAAT+TGG + chr3_1:67030898-67030917 None:intergenic 20.0%
!! TAGTTAACAAATATAACAGA+AGG - chr3_1:67031501-67031520 Msa0369720:CDS 20.0%
!! ATTTGAACACTTAAAAGTTA+TGG + chr3_1:67031575-67031594 None:intergenic 20.0%
!! GTATATTTGAATACAAATTG+TGG + chr3_1:67031615-67031634 None:intergenic 20.0%
!! TTTGTATTCAAATATACATC+TGG - chr3_1:67031618-67031637 Msa0369720:intron 20.0%
!! TATGGTATCATTATTCTATT+GGG + chr3_1:67031828-67031847 None:intergenic 20.0%
!!! AATCATGATAAAGCATTAAT+AGG + chr3_1:67028878-67028897 None:intergenic 20.0%
!!! AGAATTTTTGAATAAAGTTG+TGG + chr3_1:67032125-67032144 None:intergenic 20.0%
!! ATTCAAAAATTCTCAGAATA+TGG - chr3_1:67032132-67032151 Msa0369720:intron 20.0%
!!! CATAATTTTGAAAATGTAGA+TGG + chr3_1:67032661-67032680 None:intergenic 20.0%
!! GGTAAATAAATGTAAAAACA+TGG - chr3_1:67032709-67032728 Msa0369720:five_prime_UTR 20.0%
!! AAATTCTCAATTTCCTAATT+AGG + chr3_1:67029661-67029680 None:intergenic 20.0%
!! TTGAATCAAAAAAAGTGTGT+AGG + chr3_1:67027350-67027369 None:intergenic 25.0%
!!! ATATGCCACAAGTTTTTTTT+TGG - chr3_1:67027414-67027433 Msa0369720:three_prime_UTR 25.0%
! AATCACCAAAAAAAAACTTG+TGG + chr3_1:67027422-67027441 None:intergenic 25.0%
! GTCAAATGATAAAAGTTATG+TGG + chr3_1:67027451-67027470 None:intergenic 25.0%
! TACGTAAAAGCAATTCAAAT+TGG - chr3_1:67027494-67027513 Msa0369720:three_prime_UTR 25.0%
! ATAAACATGAAGGATGAAAT+TGG + chr3_1:67027571-67027590 None:intergenic 25.0%
! AGTACTACATATATAAGAGA+AGG - chr3_1:67027596-67027615 Msa0369720:three_prime_UTR 25.0%
! CTTAAAAAAGAAACTCGAAT+AGG - chr3_1:67027807-67027826 Msa0369720:CDS 25.0%
! ATTTAACGCAATGATCATTA+AGG - chr3_1:67027946-67027965 Msa0369720:CDS 25.0%
! TTTAACGCAATGATCATTAA+GGG - chr3_1:67027947-67027966 Msa0369720:CDS 25.0%
! AAATATACACTTGAAATTCG+TGG - chr3_1:67028430-67028449 Msa0369720:intron 25.0%
!! AAAACAAATTTTGCTAACCA+AGG - chr3_1:67028807-67028826 Msa0369720:intron 25.0%
!! AAACAAATTTTGCTAACCAA+GGG - chr3_1:67028808-67028827 Msa0369720:intron 25.0%
! AGAATTCTTGAATAAAGTTG+TGG + chr3_1:67028906-67028925 None:intergenic 25.0%
! AACTTTATTCAAGAATTCTC+TGG - chr3_1:67028907-67028926 Msa0369720:intron 25.0%
! TTGAGTATATCTTCAATATC+AGG - chr3_1:67028985-67029004 Msa0369720:intron 25.0%
! CTAGTAAATTCTTGAAGTAT+AGG + chr3_1:67029179-67029198 None:intergenic 25.0%
! CAAGAATTTACTAGCTAAAA+AGG - chr3_1:67029185-67029204 Msa0369720:CDS 25.0%
!! ATTACTCACTAATTTTCAGT+TGG + chr3_1:67029391-67029410 None:intergenic 25.0%
!!! ATTGAGAATTTTGAAGAGTA+TGG - chr3_1:67029670-67029689 Msa0369720:intron 25.0%
! ACAATCAATTAATGCATGTA+TGG - chr3_1:67029709-67029728 Msa0369720:intron 25.0%
!! TGGTTAGTTAAAGACAATTT+GGG - chr3_1:67029756-67029775 Msa0369720:intron 25.0%
! TTAAGAAGGATTAGACAATA+AGG - chr3_1:67030003-67030022 Msa0369720:intron 25.0%
!!! TAGCGACATTATTTTTTTGT+CGG - chr3_1:67030532-67030551 Msa0369720:intron 25.0%
! TTAAGGAAAAAAAACAATGC+TGG + chr3_1:67030628-67030647 None:intergenic 25.0%
!!! ACTATGCTAGTCTTTTTTTA+AGG + chr3_1:67030645-67030664 None:intergenic 25.0%
! TAATCACCAAAAAAAACTTG+TGG + chr3_1:67030725-67030744 None:intergenic 25.0%
! ATCAAATGATTAAAGTTGTG+TGG + chr3_1:67030753-67030772 None:intergenic 25.0%
! TATAGTACTAGTATACATGA+AGG + chr3_1:67030863-67030882 None:intergenic 25.0%
! TACTAGTACTATAAAAGAGA+AGG - chr3_1:67030870-67030889 Msa0369720:intron 25.0%
! TAATGATCATTGCGTTAAAT+GGG + chr3_1:67027946-67027965 None:intergenic 25.0%
! TTAATGATCATTGCGTTAAA+TGG + chr3_1:67027947-67027966 None:intergenic 25.0%
! ATTTAACGCAATGATCATTA+AGG - chr3_1:67027946-67027965 Msa0369720:CDS 25.0%
! TTTAACGCAATGATCATTAA+GGG - chr3_1:67027947-67027966 Msa0369720:CDS 25.0%
! AACAAAATTCAACAACAACT+TGG - chr3_1:67031460-67031479 Msa0369720:CDS 25.0%
! GTATGGTATCATTATTCTAT+TGG + chr3_1:67031829-67031848 None:intergenic 25.0%
!! AAAACAAATTTTGCTAACCA+AGG - chr3_1:67028807-67028826 Msa0369720:intron 25.0%
! AAGCATTAATAGGAATACTA+TGG + chr3_1:67028868-67028887 None:intergenic 25.0%
! TTGACTATATCTTGAATAAC+AGG - chr3_1:67032197-67032216 Msa0369720:CDS 25.0%
! TATAGGTTATCAAAATGAGT+CGG + chr3_1:67032374-67032393 None:intergenic 25.0%
! CTAGTAAATTCTTGAAGTAT+AGG + chr3_1:67029179-67029198 None:intergenic 25.0%
! CAAGAATTTACTAGCTAAAA+AGG - chr3_1:67029185-67029204 Msa0369720:CDS 25.0%
! ATAAATGTAAAAACATGGCA+AGG - chr3_1:67032714-67032733 Msa0369720:five_prime_UTR 25.0%
! AGATAGTGTAATTAATTGTC+AGG - chr3_1:67032825-67032844 Msa0369720:five_prime_UTR 25.0%
! GATAGTGTAATTAATTGTCA+GGG - chr3_1:67032826-67032845 Msa0369720:five_prime_UTR 25.0%
!! TAGGAAATTGAGAATTTTGA+AGG - chr3_1:67029664-67029683 Msa0369720:intron 25.0%
!! AGGAAATTGAGAATTTTGAA+GGG - chr3_1:67029665-67029684 Msa0369720:intron 25.0%
AAGCAACAAGAACAATTAAG+AGG + chr3_1:67027680-67027699 None:intergenic 30.0%
GTTCACATCAATATAGTAGA+TGG - chr3_1:67028190-67028209 Msa0369720:intron 30.0%
AATTTAAATGGTTACTGCAG+TGG + chr3_1:67028533-67028552 None:intergenic 30.0%
! TAAGGGCATAGTATCATATT+GGG + chr3_1:67028622-67028641 None:intergenic 30.0%
! TTAAGGGCATAGTATCATAT+TGG + chr3_1:67028623-67028642 None:intergenic 30.0%
ATAAAGGGTTAAATGGTTGT+TGG - chr3_1:67028664-67028683 Msa0369720:intron 30.0%
TGTAGAGACTTTCTAAACAA+GGG + chr3_1:67029081-67029100 None:intergenic 30.0%
TTGTAGAGACTTTCTAAACA+AGG + chr3_1:67029082-67029101 None:intergenic 30.0%
TATAGGTTATCGAAATGAGT+CGG + chr3_1:67029162-67029181 None:intergenic 30.0%
TTCCAATATTGAACAACTCT+TGG + chr3_1:67029227-67029246 None:intergenic 30.0%
TGGAAGTTCTACTAATAATC+TGG - chr3_1:67029242-67029261 Msa0369720:CDS 30.0%
GTTCTACTAATAATCTGGTA+AGG - chr3_1:67029247-67029266 Msa0369720:CDS 30.0%
AGGCAAATAAATGCAAAACA+TGG - chr3_1:67029499-67029518 Msa0369720:intron 30.0%
CAAGATATTCATTTATAGCG+AGG - chr3_1:67029522-67029541 Msa0369720:intron 30.0%
AGATAGTGTAATTAATTGCC+AGG - chr3_1:67029608-67029627 Msa0369720:intron 30.0%
GATAGTGTAATTAATTGCCA+GGG - chr3_1:67029609-67029628 Msa0369720:intron 30.0%
! CCTAATTAGGTTGTAATCAA+GGG + chr3_1:67029648-67029667 None:intergenic 30.0%
! TCCTAATTAGGTTGTAATCA+AGG + chr3_1:67029649-67029668 None:intergenic 30.0%
TGTAAAAGTTTAACAAAGGG+TGG - chr3_1:67029736-67029755 Msa0369720:intron 30.0%
! GTGGTTAGTTAAAGACAATT+TGG - chr3_1:67029755-67029774 Msa0369720:intron 30.0%
! GGTTAGTTAAAGACAATTTG+GGG - chr3_1:67029757-67029776 Msa0369720:intron 30.0%
GTTAGTTAAAGACAATTTGG+GGG - chr3_1:67029758-67029777 Msa0369720:intron 30.0%
TTAGTTAAAGACAATTTGGG+GGG - chr3_1:67029759-67029778 Msa0369720:intron 30.0%
TCATTAGCCATTGAAATCAA+CGG - chr3_1:67029820-67029839 Msa0369720:intron 30.0%
!!! ATTTTGAGCGTAAAAGCATT+TGG + chr3_1:67029949-67029968 None:intergenic 30.0%
! AAAATCTAGGGTTAGTGTTA+TGG - chr3_1:67029964-67029983 Msa0369720:intron 30.0%
AGGATTAGACAATAAGGATA+AGG - chr3_1:67030009-67030028 Msa0369720:intron 30.0%
TATTATATGGAGGAGAAAGT+TGG + chr3_1:67030048-67030067 None:intergenic 30.0%
TATAGGAATTCTTAGTAGAG+TGG + chr3_1:67030194-67030213 None:intergenic 30.0%
ACTCTACTAAGAATTCCTAT+AGG - chr3_1:67030193-67030212 Msa0369720:intron 30.0%
! AATTAGGCTCTCTTTTGTAA+GGG + chr3_1:67030280-67030299 None:intergenic 30.0%
! TAATTAGGCTCTCTTTTGTA+AGG + chr3_1:67030281-67030300 None:intergenic 30.0%
TAGGAACATTGGAGTTAATT+AGG + chr3_1:67030296-67030315 None:intergenic 30.0%
TCATATTGTGATAGGAACAT+TGG + chr3_1:67030307-67030326 None:intergenic 30.0%
!! CTAATAGGTGTACTTTTTAG+CGG - chr3_1:67030381-67030400 Msa0369720:intron 30.0%
CTAAAGGAACAATTATTGAC+TGG + chr3_1:67030442-67030461 None:intergenic 30.0%
!!! AGCGACATTATTTTTTTGTC+GGG - chr3_1:67030533-67030552 Msa0369720:intron 30.0%
!!! TATGCCACAAGTCTTTTTTT+TGG - chr3_1:67030564-67030583 Msa0369720:intron 30.0%
ATCACCAAAAAAAAGACTTG+TGG + chr3_1:67030571-67030590 None:intergenic 30.0%
!!! TAGTAGCAGCATTTTTTTGT+CGG - chr3_1:67030686-67030705 Msa0369720:intron 30.0%
CATTTGATATAAGACTAGCA+TGG - chr3_1:67030765-67030784 Msa0369720:intron 30.0%
TGTTCTCTATATAGCTTACA+TGG - chr3_1:67030914-67030933 Msa0369720:intron 30.0%
TATGCGAGTTTCTTTCTTAA+TGG + chr3_1:67031081-67031100 None:intergenic 30.0%
ATTAAGAAAGAAACTCGCAT+AGG - chr3_1:67031080-67031099 Msa0369720:CDS 30.0%
TTAACGCAATGATCATTAAG+GGG - chr3_1:67027948-67027967 Msa0369720:CDS 30.0%
CTAACAATAATTCAGCTAGA+GGG - chr3_1:67031309-67031328 Msa0369720:intron 30.0%
AATAATCTAGATGGCTAACA+TGG + chr3_1:67031742-67031761 None:intergenic 30.0%
AAGTTCCACAATAATCTAGA+TGG + chr3_1:67031751-67031770 None:intergenic 30.0%
AATAAACCACTCTAATGAAG+AGG + chr3_1:67031855-67031874 None:intergenic 30.0%
ATAAAGGGTTATATGGTTGT+TGG - chr3_1:67031881-67031900 Msa0369720:intron 30.0%
! AGAGTGCTTAGATTCATAAA+GGG + chr3_1:67032003-67032022 None:intergenic 30.0%
TGTAGAGACTTTCTATACAA+GGG + chr3_1:67032293-67032312 None:intergenic 30.0%
TTGTAGAGACTTTCTATACA+AGG + chr3_1:67032294-67032313 None:intergenic 30.0%
!!! ATTTTTTAAAGCCTTTGCCA+AGG - chr3_1:67032502-67032521 Msa0369720:CDS 30.0%
!!! TTTTTTAAAGCCTTTGCCAA+GGG - chr3_1:67032503-67032522 Msa0369720:CDS 30.0%
!! TCAGTTGATTTTTCTGCAAT+TGG + chr3_1:67032585-67032604 None:intergenic 30.0%
! CCTAATTAGGTTGTAATCAA+GGG + chr3_1:67029648-67029667 None:intergenic 30.0%
! TCCTAATTAGGTTGTAATCA+AGG + chr3_1:67029649-67029668 None:intergenic 30.0%
!!! TAGCGACATTGTTTTTTGTC+TGG - chr3_1:67027384-67027403 Msa0369720:three_prime_UTR 35.0%
ATCATTTGACAAGACTAGCA+TGG - chr3_1:67027461-67027480 Msa0369720:three_prime_UTR 35.0%
GTTCTCTATAGCTTCTTACA+TGG - chr3_1:67027641-67027660 Msa0369720:three_prime_UTR 35.0%
TTCACTATAGACAACAGTTC+CGG + chr3_1:67027768-67027787 None:intergenic 35.0%
ATCCTCTGCTTTACTTAAGT+TGG - chr3_1:67027919-67027938 Msa0369720:CDS 35.0%
GATGATACAAGCAGTTTCAT+AGG - chr3_1:67027992-67028011 Msa0369720:CDS 35.0%
TCCTCTAGCTGAATTATTGT+TGG + chr3_1:67028035-67028054 None:intergenic 35.0%
ATATCAGGTGCACATACAAT+TGG - chr3_1:67029000-67029019 Msa0369720:intron 35.0%
GTAGAGACTTTCTAAACAAG+GGG + chr3_1:67029080-67029099 None:intergenic 35.0%
! ACATTGTCATTTCCACTTCT+GGG + chr3_1:67029114-67029133 None:intergenic 35.0%
GACCAAGAGTTGTTCAATAT+TGG - chr3_1:67029222-67029241 Msa0369720:CDS 35.0%
!!! ATTTTTTAAAGCCTTTGCCG+AGG - chr3_1:67029293-67029312 Msa0369720:CDS 35.0%
!!! TTTTTTAAAGCCTTTGCCGA+GGG - chr3_1:67029294-67029313 Msa0369720:CDS 35.0%
CCCTTGATTACAACCTAATT+AGG - chr3_1:67029645-67029664 Msa0369720:intron 35.0%
! TTTGAAGAGTATGGAATGCA+TGG - chr3_1:67029679-67029698 Msa0369720:intron 35.0%
! TTGAAGAGTATGGAATGCAT+GGG - chr3_1:67029680-67029699 Msa0369720:intron 35.0%
!! ATCTCATCCGTTGATTTCAA+TGG + chr3_1:67029830-67029849 None:intergenic 35.0%
ACCCAAAGTAAGTAGGTTTA+GGG - chr3_1:67029858-67029877 Msa0369720:intron 35.0%
TCCCTAAACCTACTTACTTT+GGG + chr3_1:67029862-67029881 None:intergenic 35.0%
ATCCCTAAACCTACTTACTT+TGG + chr3_1:67029863-67029882 None:intergenic 35.0%
! TGCTTTTACGCTCAAAATCT+AGG - chr3_1:67029951-67029970 Msa0369720:intron 35.0%
! GCTTTTACGCTCAAAATCTA+GGG - chr3_1:67029952-67029971 Msa0369720:intron 35.0%
! AGGGTTAGTGTTATGGAATT+AGG - chr3_1:67029971-67029990 Msa0369720:intron 35.0%
! GGGTTAGTGTTATGGAATTA+GGG - chr3_1:67029972-67029991 Msa0369720:intron 35.0%
TTAGGGTAGCAATGTTAAGA+AGG - chr3_1:67029989-67030008 Msa0369720:intron 35.0%
AAGGATAAGGATGACAAACA+AGG - chr3_1:67030022-67030041 Msa0369720:intron 35.0%
GAGGATGAGTTTATACTTGA+AGG + chr3_1:67030111-67030130 None:intergenic 35.0%
TTTGAACAATCTAAGCGTAG+AGG + chr3_1:67030130-67030149 None:intergenic 35.0%
TGAACAATCTCTTAGTAGAG+TGG + chr3_1:67030161-67030180 None:intergenic 35.0%
AATTCTTAGTAGAGTGGTGA+AGG + chr3_1:67030188-67030207 None:intergenic 35.0%
ACCTATTAGTGCCTATCATT+GGG + chr3_1:67030370-67030389 None:intergenic 35.0%
! AGGAACAATTATTGACTGGT+TGG + chr3_1:67030438-67030457 None:intergenic 35.0%
!!! AGTAGCAGCATTTTTTTGTC+GGG - chr3_1:67030687-67030706 Msa0369720:intron 35.0%
GTATACATGAAGGATAGAGT+TGG + chr3_1:67030853-67030872 None:intergenic 35.0%
CAGCAACAAGAACAAATAAG+AGG + chr3_1:67030953-67030972 None:intergenic 35.0%
! GTCTGTAGGTAACTTCTTTT+TGG + chr3_1:67031000-67031019 None:intergenic 35.0%
TTCACTATAGACAACAGTTC+CGG + chr3_1:67027768-67027787 None:intergenic 35.0%
TAATGGCATTTATGACTCCT+TGG + chr3_1:67031064-67031083 None:intergenic 35.0%
AATGGGACCAAATTAAGTGA+AGG + chr3_1:67031206-67031225 None:intergenic 35.0%
! GTGTGATGCATCAATACTTT+TGG - chr3_1:67031247-67031266 Msa0369720:CDS 35.0%
GATGATACAAGCAGTTTCAT+AGG - chr3_1:67027992-67028011 Msa0369720:CDS 35.0%
GCTAACAATAATTCAGCTAG+AGG - chr3_1:67031308-67031327 Msa0369720:intron 35.0%
TCGTCGTTAATTGTGTTAAG+TGG - chr3_1:67031644-67031663 Msa0369720:intron 35.0%
CGTTAATTGTGTTAAGTGGA+TGG - chr3_1:67031648-67031667 Msa0369720:intron 35.0%
TAAGTGGATGGTTAATGAAC+TGG - chr3_1:67031660-67031679 Msa0369720:intron 35.0%
GGTTAATTGAGTTTAGTGGA+TGG + chr3_1:67031708-67031727 None:intergenic 35.0%
ACGTGGTTAATTGAGTTTAG+TGG + chr3_1:67031712-67031731 None:intergenic 35.0%
GTTAGCCATCTAGATTATTG+TGG - chr3_1:67031743-67031762 Msa0369720:intron 35.0%
CTCTAATGAAGAGGATAGTA+TGG + chr3_1:67031846-67031865 None:intergenic 35.0%
TACTATCCTCTTCATTAGAG+TGG - chr3_1:67031846-67031865 Msa0369720:intron 35.0%
!! GAGAGTGCTTAGATTCATAA+AGG + chr3_1:67032004-67032023 None:intergenic 35.0%
ATAACAGGTGCACATACAAT+TGG - chr3_1:67032212-67032231 Msa0369720:CDS 35.0%
GTAGAGACTTTCTATACAAG+GGG + chr3_1:67032292-67032311 None:intergenic 35.0%
CCCTTGATTACAACCTAATT+AGG - chr3_1:67029645-67029664 Msa0369720:intron 35.0%
! TCTGCAATATCTGAAGCAGA+TGG - chr3_1:67027702-67027721 Msa0369720:CDS 40.0%
GCAGATGGCAAAAATGAGTT+AGG - chr3_1:67027717-67027736 Msa0369720:CDS 40.0%
TCACTATAGACAACAGTTCC+GGG + chr3_1:67027767-67027786 None:intergenic 40.0%
CTGTTGTCTATAGTGAACCA+AGG - chr3_1:67027771-67027790 Msa0369720:CDS 40.0%
!! TAAGAGCATTTACGACTCCT+TGG + chr3_1:67027791-67027810 None:intergenic 40.0%
TCACATTTACAAAGCAGTCG+TGG + chr3_1:67027857-67027876 None:intergenic 40.0%
AGCCAACTTAAGTAAAGCAG+AGG + chr3_1:67027924-67027943 None:intergenic 40.0%
GCCAACAATAATTCAGCTAG+AGG - chr3_1:67028031-67028050 Msa0369720:CDS 40.0%
TGATGATATCAAAGCCAGTG+TGG - chr3_1:67028066-67028085 Msa0369720:intron 40.0%
! ATGTGCTGATATTCTTGCTC+TGG - chr3_1:67028114-67028133 Msa0369720:intron 40.0%
ATTTGAACACTGGAAAGTCG+TGG + chr3_1:67028338-67028357 None:intergenic 40.0%
GGTTAATTGTGTTGAACGAG+AGG - chr3_1:67028451-67028470 Msa0369720:intron 40.0%
GGTTGTTGGAATTTACAGCT+AGG - chr3_1:67028678-67028697 Msa0369720:intron 40.0%
TGTTGGAATTTACAGCTAGG+AGG - chr3_1:67028681-67028700 Msa0369720:intron 40.0%
GGATTCAATCACAGCTAGTA+GGG - chr3_1:67028734-67028753 Msa0369720:intron 40.0%
! AGAGCACCTAGATTGAGAAA+GGG + chr3_1:67028786-67028805 None:intergenic 40.0%
! CATTGTCATTTCCACTTCTG+GGG + chr3_1:67029113-67029132 None:intergenic 40.0%
! CACATTGTCATTTCCACTTC+TGG + chr3_1:67029115-67029134 None:intergenic 40.0%
TGAACAACTCTTGGTCTGAA+TGG + chr3_1:67029218-67029237 None:intergenic 40.0%
AGGGAAAAGTTGTTTAACCC+TGG + chr3_1:67029629-67029648 None:intergenic 40.0%
AATCAACGGATGAGATGCAT+TGG - chr3_1:67029834-67029853 Msa0369720:intron 40.0%
CACCCAAAGTAAGTAGGTTT+AGG - chr3_1:67029857-67029876 Msa0369720:intron 40.0%
AGGTTTAGGGATTGCAATCA+AGG - chr3_1:67029871-67029890 Msa0369720:intron 40.0%
ATCTCTTAGTAGAGTGGTGA+AGG + chr3_1:67030155-67030174 None:intergenic 40.0%
! ATCATTGGGTTCCTTTTGCA+TGG + chr3_1:67030356-67030375 None:intergenic 40.0%
TGCAAAAGGAACCCAATGAT+AGG - chr3_1:67030356-67030375 Msa0369720:intron 40.0%
ACCCAATGATAGGCACTAAT+AGG - chr3_1:67030366-67030385 Msa0369720:intron 40.0%
CACCTATTAGTGCCTATCAT+TGG + chr3_1:67030371-67030390 None:intergenic 40.0%
CTGTTGTCTATAGTGAACCA+AGG - chr3_1:67027771-67027790 Msa0369720:CDS 40.0%
TCACGTTTACAAAGCAGTCA+TGG + chr3_1:67031130-67031149 None:intergenic 40.0%
GGACCAAATTAAGTGAAGGA+GGG + chr3_1:67031202-67031221 None:intergenic 40.0%
TGATGACATCAAAGCCAATG+TGG - chr3_1:67031343-67031362 Msa0369720:intron 40.0%
GGTTGTTGGAATTTACAGCT+AGG - chr3_1:67028678-67028697 Msa0369720:intron 40.0%
TGTTGGAATTTACAGCTAGG+AGG - chr3_1:67028681-67028700 Msa0369720:intron 40.0%
GGATTCAATCACAGCTAGTA+GGG - chr3_1:67028734-67028753 Msa0369720:intron 40.0%
! CTTAGATTCATAAAGGGTGC+AGG + chr3_1:67031997-67032016 None:intergenic 40.0%
! CAAAATGAGTCGGTGTTTGA+TGG + chr3_1:67032364-67032383 None:intergenic 40.0%
TGAATAGCTCCTGATCTGAA+TGG + chr3_1:67032430-67032449 None:intergenic 40.0%
TCAGATCAGGAGCTATTCAA+TGG - chr3_1:67032431-67032450 Msa0369720:CDS 40.0%
TGGAAGCTCTACTGATAATC+TGG - chr3_1:67032451-67032470 Msa0369720:CDS 40.0%
!! ACTCATTTTGACCATACCCT+TGG + chr3_1:67032522-67032541 None:intergenic 40.0%
TCAGCACATGACACAACCTT+GGG + chr3_1:67028103-67028122 None:intergenic 45.0%
ATCAGCACATGACACAACCT+TGG + chr3_1:67028104-67028123 None:intergenic 45.0%
GGGATTCAATCACAGCTAGT+AGG - chr3_1:67028733-67028752 Msa0369720:intron 45.0%
!! GGGTGCTGGAATTGAGTTAT+TGG + chr3_1:67028766-67028785 None:intergenic 45.0%
!! GAGAGCACCTAGATTGAGAA+AGG + chr3_1:67028787-67028806 None:intergenic 45.0%
TCTAAACAAGGGGTCAACGT+TGG + chr3_1:67029070-67029089 None:intergenic 45.0%
! AGTCGGTGTTTGATAGTCGA+GGG + chr3_1:67029145-67029164 None:intergenic 45.0%
!! ACTCATTTTGACCATGCCCT+CGG + chr3_1:67029313-67029332 None:intergenic 45.0%
AGTAGCATCAAACCCCTTAC+AGG - chr3_1:67029330-67029349 Msa0369720:CDS 45.0%
AAACCCCTTACAGGAAGCAA+TGG - chr3_1:67029339-67029358 Msa0369720:CDS 45.0%
TGTCCATTGCTTCCTGTAAG+GGG + chr3_1:67029345-67029364 None:intergenic 45.0%
CTGTCCATTGCTTCCTGTAA+GGG + chr3_1:67029346-67029365 None:intergenic 45.0%
TCTGTCCATTGCTTCCTGTA+AGG + chr3_1:67029347-67029366 None:intergenic 45.0%
CATTGGCACCCAAAGTAAGT+AGG - chr3_1:67029851-67029870 Msa0369720:intron 45.0%
! TATTGATTGAGCCCTTGTCG+AGG - chr3_1:67030327-67030346 Msa0369720:intron 45.0%
TTGCATGGATTCCTCGACAA+GGG + chr3_1:67030341-67030360 None:intergenic 45.0%
TTTGCATGGATTCCTCGACA+AGG + chr3_1:67030342-67030361 None:intergenic 45.0%
TGTCGAGGAATCCATGCAAA+AGG - chr3_1:67030342-67030361 Msa0369720:intron 45.0%
GTGCCCTCCTTCACTTAATT+TGG - chr3_1:67031196-67031215 Msa0369720:CDS 45.0%
GGGACCAAATTAAGTGAAGG+AGG + chr3_1:67031203-67031222 None:intergenic 45.0%
!!! TGGGCATGCTTTTTCCACAT+TGG + chr3_1:67031360-67031379 None:intergenic 45.0%
! AATGTGGAAAAAGCATGCCC+AGG - chr3_1:67031359-67031378 Msa0369720:intron 45.0%
CAGGGTAAGAATATCAGCAC+AGG + chr3_1:67031393-67031412 None:intergenic 45.0%
! CTGTGCTGATATTCTTACCC+TGG - chr3_1:67031391-67031410 Msa0369720:intron 45.0%
TCACATGAACAACAGAGTCC+CGG + chr3_1:67031421-67031440 None:intergenic 45.0%
GCTAACATGGTTCACATACG+TGG + chr3_1:67031729-67031748 None:intergenic 45.0%
CCAAGCCTACATTCCATGAA+GGG + chr3_1:67031924-67031943 None:intergenic 45.0%
CCTTCATGGAATGTAGGCTT+GGG - chr3_1:67031922-67031941 Msa0369720:intron 45.0%
GAATGTAGGCTTGGGAAGAA+GGG - chr3_1:67031930-67031949 Msa0369720:intron 45.0%
GGGATTCAATCACAGCTAGT+AGG - chr3_1:67028733-67028752 Msa0369720:intron 45.0%
GGGTGCAGGAATTGAGTTAT+TGG + chr3_1:67031983-67032002 None:intergenic 45.0%
TCTATACAAGGGGTCGACAT+TGG + chr3_1:67032282-67032301 None:intergenic 45.0%
GGTTCTTCTCCATTCAGATC+AGG - chr3_1:67032418-67032437 Msa0369720:intron 45.0%
TAAAGCCTTTGCCAAGGGTA+TGG - chr3_1:67032508-67032527 Msa0369720:CDS 45.0%
TTTGACCATACCCTTGGCAA+AGG + chr3_1:67032516-67032535 None:intergenic 45.0%
TTGTCCATTGCTTCCTGTGA+GGG + chr3_1:67032555-67032574 None:intergenic 45.0%
TTTGTCCATTGCTTCCTGTG+AGG + chr3_1:67032556-67032575 None:intergenic 45.0%
!! AAATTCAATAATAATTTAAA+TGG + chr3_1:67028545-67028564 None:intergenic 5.0%
!! TAAAAAAATCTATAATTATA+TGG - chr3_1:67030082-67030101 Msa0369720:intron 5.0%
!! AAAAAAATCTATAATTATAT+GGG - chr3_1:67030083-67030102 Msa0369720:intron 5.0%
!! CTGTGACGCATCGATTCTGT+TGG - chr3_1:67027970-67027989 Msa0369720:CDS 50.0%
TGTGGAGAAATCATGCCCCA+AGG - chr3_1:67028084-67028103 Msa0369720:intron 50.0%
CAGCACATGACACAACCTTG+GGG + chr3_1:67028102-67028121 None:intergenic 50.0%
CCAAGCCTACATCCCATGAA+GGG + chr3_1:67028707-67028726 None:intergenic 50.0%
CCTTCATGGGATGTAGGCTT+GGG - chr3_1:67028705-67028724 Msa0369720:intron 50.0%
GGATGTAGGCTTGGGAAGAA+GGG - chr3_1:67028713-67028732 Msa0369720:intron 50.0%
! CCTAGATTGAGAAAGGGTGC+TGG + chr3_1:67028780-67028799 None:intergenic 50.0%
CCAGCACCCTTTCTCAATCT+AGG - chr3_1:67028777-67028796 Msa0369720:intron 50.0%
TAACCAAGGGCTCTCAGTTG+AGG - chr3_1:67028821-67028840 Msa0369720:intron 50.0%
CAAAACAAGTGCCCCAGAAG+TGG - chr3_1:67029099-67029118 Msa0369720:intron 50.0%
! GTCGGTGTTTGATAGTCGAG+GGG + chr3_1:67029144-67029163 None:intergenic 50.0%
! GAGTCGGTGTTTGATAGTCG+AGG + chr3_1:67029146-67029165 None:intergenic 50.0%
CTGCTGCAGTAGAAGTCTGT+AGG + chr3_1:67027741-67027760 None:intergenic 50.0%
ATATTCTTACCCTGGCTGCC+CGG - chr3_1:67031399-67031418 Msa0369720:intron 50.0%
CACATGAACAACAGAGTCCC+GGG + chr3_1:67031420-67031439 None:intergenic 50.0%
CCCTTCATGGAATGTAGGCT+TGG - chr3_1:67031921-67031940 Msa0369720:intron 50.0%
CCCAAGCCTACATTCCATGA+AGG + chr3_1:67031925-67031944 None:intergenic 50.0%
GGAATGTAGGCTTGGGAAGA+AGG - chr3_1:67031929-67031948 Msa0369720:intron 50.0%
TAACCAAGGCCTCTCAGCTA+AGG - chr3_1:67032038-67032057 Msa0369720:intron 50.0%
!! AAGGACTTGGTGGCTCTTTC+AGG - chr3_1:67032057-67032076 Msa0369720:intron 50.0%
CAAAACAAGTGCCCCAGAAG+TGG - chr3_1:67029099-67029118 Msa0369720:intron 50.0%
! AGTCGGTGTTTGATGGTCGA+GGG + chr3_1:67032357-67032376 None:intergenic 50.0%
AGTAGCATCAAACCCCTCAC+AGG - chr3_1:67032539-67032558 Msa0369720:CDS 50.0%
AAACCCCTCACAGGAAGCAA+TGG - chr3_1:67032548-67032567 Msa0369720:CDS 50.0%
TGTCCATTGCTTCCTGTGAG+GGG + chr3_1:67032554-67032573 None:intergenic 50.0%
GGGGCATGATTTCTCCACAC+TGG + chr3_1:67028083-67028102 None:intergenic 55.0%
TACAGCTAGGAGGCCCTTCA+TGG - chr3_1:67028691-67028710 Msa0369720:intron 55.0%
ACAGCTAGGAGGCCCTTCAT+GGG - chr3_1:67028692-67028711 Msa0369720:intron 55.0%
CCCTTCATGGGATGTAGGCT+TGG - chr3_1:67028704-67028723 Msa0369720:intron 55.0%
CCCAAGCCTACATCCCATGA+AGG + chr3_1:67028708-67028727 None:intergenic 55.0%
GGGATGTAGGCTTGGGAAGA+AGG - chr3_1:67028712-67028731 Msa0369720:intron 55.0%
AGTCCTCAACTGAGAGCCCT+TGG + chr3_1:67028827-67028846 None:intergenic 55.0%
AGGGCTCTCAGTTGAGGACT+TGG - chr3_1:67028827-67028846 Msa0369720:intron 55.0%
GCTCTCAGTTGAGGACTTGG+TGG - chr3_1:67028830-67028849 Msa0369720:intron 55.0%
!! GAGGACTTGGTGGCTCTTTC+AGG - chr3_1:67028840-67028859 Msa0369720:intron 55.0%
TAAAGCCTTTGCCGAGGGCA+TGG - chr3_1:67029299-67029318 Msa0369720:CDS 55.0%
TTTGACCATGCCCTCGGCAA+AGG + chr3_1:67029307-67029326 None:intergenic 55.0%
CTTCTACTGCAGCAGCTGTC+CGG - chr3_1:67031019-67031038 Msa0369720:intron 55.0%
CAGCACAGGACACAACTCCT+GGG + chr3_1:67031379-67031398 None:intergenic 55.0%
TCAGCACAGGACACAACTCC+TGG + chr3_1:67031380-67031399 None:intergenic 55.0%
TATTCTTACCCTGGCTGCCC+GGG - chr3_1:67031400-67031419 Msa0369720:intron 55.0%
TACAGCTAGGAGGCCCTTCA+TGG - chr3_1:67028691-67028710 Msa0369720:intron 55.0%
GGAGGCCCTTCATGGAATGT+AGG - chr3_1:67031916-67031935 Msa0369720:intron 55.0%
AGTCCTTAGCTGAGAGGCCT+TGG + chr3_1:67032044-67032063 None:intergenic 55.0%
AGGCCTCTCAGCTAAGGACT+TGG - chr3_1:67032044-67032063 Msa0369720:intron 55.0%
CCACCAAGTCCTTAGCTGAG+AGG + chr3_1:67032050-67032069 None:intergenic 55.0%
CCTCTCAGCTAAGGACTTGG+TGG - chr3_1:67032047-67032066 Msa0369720:intron 55.0%
! GTCGGTGTTTGATGGTCGAG+GGG + chr3_1:67032356-67032375 None:intergenic 55.0%
! GAGTCGGTGTTTGATGGTCG+AGG + chr3_1:67032358-67032377 None:intergenic 55.0%
CTTCTACTGCAGCAGCTGCC+CGG - chr3_1:67027746-67027765 Msa0369720:CDS 60.0%
TGCTCTGGCTGCTCGAGACT+CGG - chr3_1:67028129-67028148 Msa0369720:intron 60.0%
GGAGGCCCTTCATGGGATGT+AGG - chr3_1:67028699-67028718 Msa0369720:intron 60.0%
AACAGAGTCCCGGGCAGCCA+GGG + chr3_1:67031411-67031430 None:intergenic 65.0%
CAACAGAGTCCCGGGCAGCC+AGG + chr3_1:67031412-67031431 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 67027343 67032955 67027343 ID=Msa0369720;Name=Msa0369720
chr3_1 mRNA 67027343 67032955 67027343 ID=Msa0369720-mRNA-1;Parent=Msa0369720;Name=Msa0369720-mRNA-1;_AED=0.19;_eAED=0.19;_QI=296|0.57|0.62|1|0.71|0.5|8|351|531
chr3_1 exon 67027343 67028079 67027343 ID=Msa0369720-mRNA-1:exon:13747;Parent=Msa0369720-mRNA-1
chr3_1 exon 67028220 67028385 67028220 ID=Msa0369720-mRNA-1:exon:13746;Parent=Msa0369720-mRNA-1
chr3_1 exon 67029153 67029422 67029153 ID=Msa0369720-mRNA-1:exon:13745;Parent=Msa0369720-mRNA-1
chr3_1 exon 67031035 67031291 67031035 ID=Msa0369720-mRNA-1:exon:13744;Parent=Msa0369720-mRNA-1
chr3_1 exon 67031437 67031602 67031437 ID=Msa0369720-mRNA-1:exon:13743;Parent=Msa0369720-mRNA-1
chr3_1 exon 67032193 67032330 67032193 ID=Msa0369720-mRNA-1:exon:13742;Parent=Msa0369720-mRNA-1
chr3_1 exon 67032426 67032743 67032426 ID=Msa0369720-mRNA-1:exon:13741;Parent=Msa0369720-mRNA-1
chr3_1 exon 67032765 67032955 67032765 ID=Msa0369720-mRNA-1:exon:13740;Parent=Msa0369720-mRNA-1
chr3_1 five_prime_UTR 67032765 67032955 67032765 ID=Msa0369720-mRNA-1:five_prime_utr;Parent=Msa0369720-mRNA-1
chr3_1 five_prime_UTR 67032639 67032743 67032639 ID=Msa0369720-mRNA-1:five_prime_utr;Parent=Msa0369720-mRNA-1
chr3_1 CDS 67032426 67032638 67032426 ID=Msa0369720-mRNA-1:cds;Parent=Msa0369720-mRNA-1
chr3_1 CDS 67032193 67032330 67032193 ID=Msa0369720-mRNA-1:cds;Parent=Msa0369720-mRNA-1
chr3_1 CDS 67031437 67031602 67031437 ID=Msa0369720-mRNA-1:cds;Parent=Msa0369720-mRNA-1
chr3_1 CDS 67031035 67031291 67031035 ID=Msa0369720-mRNA-1:cds;Parent=Msa0369720-mRNA-1
chr3_1 CDS 67029153 67029422 67029153 ID=Msa0369720-mRNA-1:cds;Parent=Msa0369720-mRNA-1
chr3_1 CDS 67028220 67028385 67028220 ID=Msa0369720-mRNA-1:cds;Parent=Msa0369720-mRNA-1
chr3_1 CDS 67027694 67028079 67027694 ID=Msa0369720-mRNA-1:cds;Parent=Msa0369720-mRNA-1
chr3_1 three_prime_UTR 67027343 67027693 67027343 ID=Msa0369720-mRNA-1:three_prime_utr;Parent=Msa0369720-mRNA-1
Gene Sequence

>Msa0369720

ATGGCAGCTTACTACTTCCTCTTAATTGTTCTTGTTGCTTCTTCTGCAATATCTGAAGCAGATGGCAAAAATGAGTTAGGTACAGACTTCTACTGCAGCAGCTGCCCGGAACTGTTGTCTATAGTGAACCAAGGAGTCGTAAATGCTCTTAAAAAAGAAACTCGAATAGGAGCTTCTTTACTTCGATTGCATTTCCACGACTGCTTTGTAAATGGCTGTGACGCATCGATTCTGTTGGATGATACAAGCAGTTTCATAGGAGAAAAAACAGCAGCAGCCAACAATAATTCAGCTAGAGGATTCAACGTGATTGATGATATCAAAGCCAGTGTGGAGAAATCATGCCCCAAGCTAGGAGGCCCTTCATGGGATGTAGGCTTGGGAAGAAGGGATTCAATCACAGCTAGTAGGGCTGATGCCAATAACTCAATTCCAGCACCCTTTCTCAATCTAGGTGCTCTCAAAACAAATTTTGCTAACCAAGGGCTCTCAGTTGAGGACTTGGTGGCTCTTTCAGGTGCACATACAATTGGTCTCGCTCGATGTGTACAATTTCGAGCACACATCTACAATGACTCCAACGTTGACCCCTTGTTTAGAAAGTCTCTACAAAACAAGTGCCCCAGAAGTGGAAATGACAATGTGCTCGAACCCCTCGACTATCAAACACCGACTCATTTCGATAACCTATACTTCAAGAATTTACTAGCTAAAAAGGCTCTTCTCCATTCAGACCAAGAGTTGTTCAATATTGGAAGTTCTACTAATAATCTGTACTATAAAAGAGAAGGCACCAATTTTGTTCATTTTTGTGTTCTCTATATAGCTTACATGGCTTCTTACTACTTCCTCTTATTTGTTCTTGTTGCTGCTTCTGCAATATCTGAAGCAGATGCCAAAAAGAAGTTACCTACAGACTTCTACTGCAGCAGCTGTCCGGAACTGTTGTCTATAGTGAACCAAGGAGTCATAAATGCCATTAAGAAAGAAACTCGCATAGGAGCTTCTTTACTTCGATTGCATTTCCATGACTGCTTTGTAAACCTAGGAGGCCCTTCATGGAATGTAGGCTTGGGAAGAAGGGATTCAATCACAGCTAGTAGGGCTGATGCCAATAACTCAATTCCTGCACCCTTTATGAATCTAAGCACTCTCAAAACAAATTTTGCTAACCAAGGCCTCTCAGCTAAGGACTTGGTGGCTCTTTCAGGTGCACATACAATTGGTCTAGCTAGATGTGTACAATTTCGAGCACATATCTACAATGACTCCAATGTCGACCCCTTGTATAGAAAGTCTCTACAAAACAAGTGCCCCAGAAGTGGAAACGACAATGTTCTCGAACCCCTCGACCATCAAACACCGACTCATTTTGATAACCTATACTTCAAGAATTTACTAGCTAAAAAGGTTCTTCTCCATTCAGATCAGGAGCTATTCAATGGAAGCTCTACTGATAATCTGGTAAAGAAATATGCTACTGATAATGCTAAATTTTTTAAAGCCTTTGCCAAGGGTATGGTCAAAATGAGTAGCATCAAACCCCTCACAGGAAGCAATGGACAAATCAGAACCAATTGCAGAAAAATCAACTGA
Protein sequence

>Msa0369720

MAAYYFLLIVLVASSAISEADGKNELGTDFYCSSCPELLSIVNQGVVNALKKETRIGASLLRLHFHDCFVNGCDASILLDDTSSFIGEKTAAANNNSARGFNVIDDIKASVEKSCPKLGGPSWDVGLGRRDSITASRADANNSIPAPFLNLGALKTNFANQGLSVEDLVALSGAHTIGLARCVQFRAHIYNDSNVDPLFRKSLQNKCPRSGNDNVLEPLDYQTPTHFDNLYFKNLLAKKALLHSDQELFNIGSSTNNLYYKREGTNFVHFCVLYIAYMASYYFLLFVLVAASAISEADAKKKLPTDFYCSSCPELLSIVNQGVINAIKKETRIGASLLRLHFHDCFVNLGGPSWNVGLGRRDSITASRADANNSIPAPFMNLSTLKTNFANQGLSAKDLVALSGAHTIGLARCVQFRAHIYNDSNVDPLYRKSLQNKCPRSGNDNVLEPLDHQTPTHFDNLYFKNLLAKKVLLHSDQELFNGSSTDNLVKKYATDNAKFFKAFAKGMVKMSSIKPLTGSNGQIRTNCRKIN*