AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1088290

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1088290 MtrunA17_Chr3g0121351 98.862 615 2 4 1 612 1 613 0.0 1227
Msa1088290 MtrunA17_Chr1g0176041 75.167 600 110 8 34 612 27 608 0.0 847
Msa1088290 MtrunA17_Chr4g0063551 60.590 576 200 12 1 562 1 563 0.0 636
Msa1088290 MtrunA17_Chr2g0330401 43.649 433 217 8 108 535 61 471 1.06e-113 348
Msa1088290 MtrunA17_Chr3g0107851 44.638 401 209 5 129 526 101 491 2.76e-107 334
Msa1088290 MtrunA17_Chr6g0449911 42.094 468 240 10 132 587 152 600 8.93e-103 327
Msa1088290 MtrunA17_Chr2g0293631 44.028 427 218 7 132 556 483 890 5.14e-101 332
Msa1088290 MtrunA17_Chr4g0076491 41.014 434 228 7 128 546 270 690 6.10e-101 322
Msa1088290 MtrunA17_Chr6g0449741 40.323 434 229 7 128 546 232 650 9.68e-100 318
Msa1088290 MtrunA17_Chr7g0270131 40.217 460 246 10 94 540 170 613 3.60e-97 314
Msa1088290 MtrunA17_Chr1g0200181 36.364 473 272 7 132 592 132 587 4.45e-94 301
Msa1088290 MtrunA17_Chr1g0157691 38.983 413 230 6 132 537 134 531 1.18e-93 300
Msa1088290 MtrunA17_Chr4g0058591 42.228 386 204 6 95 479 154 521 1.48e-88 284
Msa1088290 MtrunA17_Chr2g0277821 39.078 412 232 5 130 538 489 884 1.96e-87 294
Msa1088290 MtrunA17_Chr5g0409981 41.429 420 217 10 129 537 84 485 6.56e-87 280
Msa1088290 MtrunA17_Chr6g0461751 34.123 422 260 6 137 555 132 538 1.39e-75 250
Msa1088290 MtrunA17_Chr7g0271121 40.000 395 210 10 135 520 91 467 3.63e-74 252
Msa1088290 MtrunA17_Chr5g0442191 39.153 378 208 10 146 520 82 440 6.49e-74 248
Msa1088290 MtrunA17_Chr1g0193491 34.864 479 252 13 111 562 85 530 1.64e-72 245
Msa1088290 MtrunA17_Chr7g0263771 32.653 441 264 9 106 537 88 504 2.60e-70 238
Msa1088290 MtrunA17_Chr3g0095031 39.024 369 203 10 166 531 111 460 3.90e-69 234
Msa1088290 MtrunA17_Chr7g0236841 33.565 432 253 7 143 560 8 419 1.33e-65 221
Msa1088290 MtrunA17_Chr6g0483491 33.729 421 251 7 143 555 8 408 1.66e-65 221
Msa1088290 MtrunA17_Chr2g0297261 32.924 407 248 8 126 531 17 399 5.89e-63 213
Msa1088290 MtrunA17_Chr2g0300291 36.719 384 213 10 144 519 140 501 1.03e-62 221
Msa1088290 MtrunA17_Chr2g0310581 35.264 397 231 8 133 524 41 416 5.80e-62 213
Msa1088290 MtrunA17_Chr3g0098121 36.528 386 210 11 144 519 151 511 1.05e-61 218
Msa1088290 MtrunA17_Chr4g0070981 34.103 390 234 8 144 532 40 407 1.62e-60 207
Msa1088290 MtrunA17_Chr2g0299681 33.846 390 235 8 144 532 40 407 5.30e-59 203
Msa1088290 MtrunA17_Chr2g0329931 34.103 390 234 7 144 532 40 407 1.21e-58 202
Msa1088290 MtrunA17_Chr8g0342861 33.333 390 237 7 144 532 40 407 1.16e-57 199
Msa1088290 MtrunA17_Chr6g0475251 34.805 385 219 11 144 517 102 465 1.38e-57 205
Msa1088290 MtrunA17_Chr4g0040761 32.992 391 237 8 146 532 20 389 3.62e-55 200
Msa1088290 MtrunA17_Chr1g0204391 32.824 393 216 8 144 509 43 414 3.78e-54 194
Msa1088290 MtrunA17_Chr4g0003441 36.311 347 191 8 167 507 130 452 3.27e-52 186
Msa1088290 MtrunA17_Chr3g0114081 34.737 380 209 11 151 508 22 384 5.78e-52 188
Msa1088290 MtrunA17_Chr6g0466611 31.043 393 250 7 143 525 140 521 6.03e-52 190
Msa1088290 MtrunA17_Chr7g0247221 29.620 395 251 8 144 536 142 511 1.69e-49 179
Msa1088290 MtrunA17_Chr7g0247181 29.873 395 250 10 144 536 139 508 1.94e-49 179
Msa1088290 MtrunA17_Chr1g0149251 36.446 332 179 10 183 507 2 308 3.49e-49 174
Msa1088290 MtrunA17_Chr7g0247191 29.873 395 250 10 144 536 149 518 5.07e-49 178
Msa1088290 MtrunA17_Chr8g0386451 31.435 439 274 12 96 522 240 663 1.75e-47 178
Msa1088290 MtrunA17_Chr8g0347161 34.870 347 208 10 164 502 121 457 3.62e-47 174
Msa1088290 MtrunA17_Chr7g0236831 30.323 465 252 12 116 519 137 590 3.59e-46 174
Msa1088290 MtrunA17_Chr8g0347151 35.196 358 206 10 157 502 213 556 1.09e-45 172
Msa1088290 MtrunA17_Chr2g0307471 32.737 391 221 12 145 520 91 454 2.46e-45 169
Msa1088290 MtrunA17_Chr4g0062301 33.151 365 211 11 168 521 120 462 4.06e-45 169
Msa1088290 MtrunA17_Chr8g0347171 33.151 365 226 9 146 502 161 515 5.08e-44 166
Msa1088290 MtrunA17_Chr4g0029191 28.281 442 244 12 145 522 44 476 1.36e-42 162
Msa1088290 MtrunA17_Chr4g0034411 33.154 371 223 10 156 520 87 438 1.73e-42 163
Msa1088290 MtrunA17_Chr2g0301281 28.507 442 243 11 145 522 41 473 1.98e-42 161
Msa1088290 MtrunA17_Chr5g0443991 32.884 371 225 9 156 520 87 439 3.53e-41 159
Msa1088290 MtrunA17_Chr1g0179761 28.837 430 251 15 110 509 43 447 1.53e-36 142
Msa1088290 MtrunA17_Chr2g0309551 26.906 446 269 7 138 538 102 535 1.02e-35 141
Msa1088290 MtrunA17_Chr1g0192021 27.007 411 236 11 145 509 26 418 2.37e-34 138
Msa1088290 MtrunA17_Chr4g0074521 31.671 401 215 15 130 497 67 441 3.55e-32 130
Msa1088290 MtrunA17_Chr5g0429221 27.913 369 243 8 143 509 1 348 7.30e-32 128
Msa1088290 MtrunA17_Chr3g0145781 27.047 403 258 14 143 521 130 520 1.36e-31 129
Msa1088290 MtrunA17_Chr1g0169331 25.436 401 243 10 166 531 12 391 1.06e-28 118
Msa1088290 MtrunA17_Chr4g0004301 27.114 402 209 13 182 519 70 451 2.29e-27 116
Msa1088290 MtrunA17_Chr5g0434301 26.866 402 210 13 182 519 70 451 1.32e-26 114
Msa1088290 MtrunA17_Chr3g0137901 43.411 129 66 1 379 507 23 144 2.27e-26 106
Msa1088290 MtrunA17_Chr8g0342851 25.967 362 215 9 174 532 2 313 5.43e-25 106
Msa1088290 MtrunA17_Chr4g0039471 32.906 234 130 7 131 353 202 419 4.35e-24 105
Msa1088290 MtrunA17_Chr4g0039471 30.622 209 90 8 145 352 2 156 1.05e-16 82.8
Msa1088290 MtrunA17_Chr8g0349951 35.000 160 93 3 143 301 8 157 7.46e-24 98.2
Msa1088290 MtrunA17_Chr1g0155201 29.487 312 170 14 276 568 14 294 1.57e-23 102
Msa1088290 MtrunA17_Chr4g0062321 32.018 228 132 8 256 475 23 235 1.21e-21 94.7
Msa1088290 MtrunA17_Chr8g0354761 26.050 357 220 11 168 508 31 359 4.41e-21 96.7
Msa1088290 MtrunA17_Chr4g0025141 32.461 191 104 6 334 509 15 195 2.07e-18 85.1
Msa1088290 MtrunA17_Chr3g0137891 35.393 178 99 6 183 358 2 165 5.43e-18 83.6
Msa1088290 MtrunA17_Chr0c30g0494091 32.174 230 133 6 130 349 67 283 8.62e-18 85.9
Msa1088290 MtrunA17_Chr4g0058601 47.368 76 40 0 469 544 9 84 1.85e-16 75.9
Msa1088290 MtrunA17_Chr8g0364251 33.113 151 92 3 407 555 438 581 2.75e-15 79.3
Msa1088290 MtrunA17_Chr3g0108851 22.824 425 259 14 169 572 19 395 5.71e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1088290 AT2G42520.2 74.746 590 110 11 1 564 1 577 0.0 829
Msa1088290 AT2G42520.1 74.746 590 110 11 1 564 1 577 0.0 829
Msa1088290 AT2G42520.3 74.746 590 110 11 1 564 1 577 0.0 829
Msa1088290 AT3G58570.1 73.142 592 107 9 3 569 4 568 0.0 806
Msa1088290 AT3G58510.1 73.604 591 104 12 1 564 1 566 0.0 796
Msa1088290 AT3G58510.3 73.604 591 104 12 1 564 1 566 0.0 796
Msa1088290 AT3G58510.2 73.604 591 104 12 1 564 1 566 0.0 796
Msa1088290 AT5G63120.2 45.833 432 207 8 109 535 132 541 6.85e-117 360
Msa1088290 AT1G55150.1 40.980 449 238 8 87 530 44 470 1.18e-110 341
Msa1088290 AT5G14610.2 44.681 423 214 6 132 552 149 553 1.48e-110 345
Msa1088290 AT5G14610.6 44.681 423 214 6 132 552 149 553 1.64e-110 345
Msa1088290 AT5G14610.5 44.681 423 214 6 132 552 157 561 1.97e-110 345
Msa1088290 AT1G55150.2 39.749 478 256 9 87 554 69 524 6.71e-110 340
Msa1088290 AT3G01540.1 44.787 422 211 7 132 551 146 547 4.15e-108 338
Msa1088290 AT3G01540.4 44.787 422 211 7 132 551 146 547 4.17e-108 338
Msa1088290 AT3G01540.2 44.787 422 211 7 132 551 146 547 4.17e-108 338
Msa1088290 AT3G01540.3 44.787 422 211 7 132 551 146 547 4.17e-108 338
Msa1088290 AT5G14610.7 45.780 391 192 6 164 552 50 422 1.37e-103 323
Msa1088290 AT5G14610.3 45.780 391 192 6 164 552 50 422 1.37e-103 323
Msa1088290 AT5G14610.1 44.203 414 211 6 141 552 226 621 5.03e-103 328
Msa1088290 AT2G33730.1 40.553 434 230 6 128 546 297 717 4.40e-100 321
Msa1088290 AT3G06480.1 41.995 431 226 7 132 556 423 835 7.00e-96 317
Msa1088290 AT2G47330.1 40.173 463 240 10 95 540 168 610 8.69e-96 310
Msa1088290 AT5G51280.1 36.730 471 273 8 132 592 134 589 1.01e-94 303
Msa1088290 AT1G20920.2 39.614 414 231 6 128 538 175 572 1.18e-93 306
Msa1088290 AT1G20920.4 39.614 414 231 6 128 538 513 910 1.04e-91 307
Msa1088290 AT1G20920.6 39.614 414 231 6 128 538 513 910 1.04e-91 307
Msa1088290 AT1G20920.3 39.614 414 231 6 128 538 513 910 1.04e-91 307
Msa1088290 AT1G20920.7 39.614 414 231 6 128 538 513 910 1.04e-91 307
Msa1088290 AT1G20920.5 39.614 414 231 6 128 538 513 910 1.04e-91 307
Msa1088290 AT1G20920.1 39.614 414 231 6 128 538 513 910 1.04e-91 307
Msa1088290 AT4G33370.1 38.015 413 234 6 132 537 85 482 1.55e-91 293
Msa1088290 AT1G31970.1 42.680 403 205 9 143 537 115 499 1.06e-89 288
Msa1088290 AT5G63120.1 44.384 365 176 8 109 468 132 474 3.48e-88 282
Msa1088290 AT5G63120.3 44.384 365 176 8 109 468 132 474 4.68e-88 282
Msa1088290 AT5G63120.4 44.384 365 176 8 109 468 132 474 4.68e-88 282
Msa1088290 AT5G63120.5 44.384 365 176 8 109 468 132 474 4.68e-88 282
Msa1088290 AT5G14610.4 43.642 346 175 6 132 475 157 484 3.31e-84 273
Msa1088290 AT1G28180.1 41.444 374 201 6 174 546 3 359 4.98e-81 260
Msa1088290 AT3G09620.1 38.929 411 202 9 125 531 376 741 7.88e-79 269
Msa1088290 AT3G09620.2 38.929 411 202 9 125 531 377 742 8.30e-79 269
Msa1088290 AT3G02065.3 34.824 425 261 6 129 552 95 504 3.67e-78 257
Msa1088290 AT3G02065.2 34.824 425 261 6 129 552 95 504 3.67e-78 257
Msa1088290 AT3G06480.2 41.954 348 182 6 132 477 423 752 5.45e-75 255
Msa1088290 AT3G22330.1 39.459 370 202 10 166 532 126 476 1.46e-73 248
Msa1088290 AT5G60990.1 34.298 449 274 6 143 582 8 444 4.75e-72 239
Msa1088290 AT3G22310.2 38.642 383 213 10 166 545 138 501 6.13e-72 243
Msa1088290 AT3G22310.1 38.642 383 213 10 166 545 138 501 8.46e-72 243
Msa1088290 AT3G09720.2 31.973 441 264 10 108 534 92 510 4.48e-68 231
Msa1088290 AT3G09720.1 31.973 441 264 10 108 534 92 510 4.48e-68 231
Msa1088290 AT5G26742.1 38.684 380 211 8 146 520 104 466 5.63e-68 235
Msa1088290 AT5G26742.2 38.684 380 211 8 146 520 104 466 5.72e-68 235
Msa1088290 AT3G02065.1 33.858 381 236 6 173 552 2 367 6.21e-68 226
Msa1088290 AT5G26742.3 41.092 348 183 9 178 520 43 373 1.72e-65 227
Msa1088290 AT1G16280.1 37.127 369 207 7 159 521 70 419 4.33e-65 222
Msa1088290 AT3G19760.1 32.500 400 245 8 133 531 26 401 7.41e-64 216
Msa1088290 AT4G16630.1 36.126 382 217 8 144 519 167 527 2.75e-61 218
Msa1088290 AT1G72730.1 32.918 401 246 6 133 532 30 408 3.35e-59 204
Msa1088290 AT1G51380.1 30.318 409 258 8 128 534 8 391 8.42e-59 202
Msa1088290 AT3G13920.1 33.333 390 237 6 144 532 39 406 1.06e-58 202
Msa1088290 AT1G54270.1 33.846 390 235 8 144 532 39 406 1.37e-58 202
Msa1088290 AT3G13920.3 33.333 390 237 6 144 532 29 396 3.39e-58 201
Msa1088290 AT3G13920.4 33.773 379 227 7 155 532 46 401 3.93e-58 201
Msa1088290 AT1G54270.2 34.301 379 225 9 155 532 46 401 4.40e-58 201
Msa1088290 AT1G77030.1 34.711 363 218 5 146 507 30 374 5.97e-58 209
Msa1088290 AT3G13920.2 34.048 373 223 6 144 515 39 389 5.88e-57 198
Msa1088290 AT3G13920.5 34.048 373 223 6 144 515 43 393 7.89e-57 197
Msa1088290 AT4G09730.1 31.690 426 255 11 143 549 111 519 2.97e-54 195
Msa1088290 AT4G00660.1 30.256 390 246 7 144 531 131 496 5.52e-54 192
Msa1088290 AT4G00660.2 30.256 390 246 7 144 531 131 496 5.52e-54 192
Msa1088290 AT5G11170.1 35.372 376 210 12 167 534 69 419 8.13e-53 187
Msa1088290 AT5G11200.1 35.372 376 210 12 167 534 69 419 8.13e-53 187
Msa1088290 AT5G05450.1 35.427 398 207 17 133 508 13 382 3.36e-52 189
Msa1088290 AT2G45810.1 30.303 396 247 10 144 536 154 523 2.03e-51 186
Msa1088290 AT1G71370.1 35.340 382 214 12 146 513 16 378 3.29e-51 186
Msa1088290 AT3G61240.2 30.184 381 240 8 144 522 124 480 8.12e-51 183
Msa1088290 AT3G61240.1 30.184 381 240 8 144 522 124 480 8.12e-51 183
Msa1088290 AT5G62190.1 34.097 349 220 5 169 517 121 459 1.20e-48 181
Msa1088290 AT5G11170.2 35.278 360 200 12 183 534 2 336 3.29e-48 172
Msa1088290 AT5G11200.3 32.933 416 207 14 167 534 69 460 1.04e-47 174
Msa1088290 AT5G65900.1 33.696 368 217 10 144 504 154 501 2.04e-47 176
Msa1088290 AT5G11200.2 32.019 431 203 14 167 531 69 475 2.46e-47 173
Msa1088290 AT5G08610.1 34.711 363 219 8 168 522 406 758 2.93e-47 178
Msa1088290 AT5G63630.1 34.043 376 222 10 159 522 69 430 1.44e-45 169
Msa1088290 AT5G63630.2 34.043 376 222 10 159 522 263 624 2.31e-45 172
Msa1088290 AT5G08620.1 33.333 369 216 9 168 522 104 456 7.25e-45 168
Msa1088290 AT2G40700.1 27.928 444 244 11 145 520 31 466 8.35e-43 163
Msa1088290 AT1G63250.1 34.670 349 205 12 165 502 349 685 1.98e-42 164
Msa1088290 AT2G07750.1 34.670 349 205 13 165 502 396 732 7.44e-42 162
Msa1088290 AT3G18600.1 30.548 383 238 8 145 520 90 451 3.51e-41 157
Msa1088290 AT5G54910.1 31.401 414 242 15 143 539 70 458 8.62e-40 155
Msa1088290 AT3G16840.2 28.571 434 224 13 155 519 202 618 6.69e-39 153
Msa1088290 AT3G16840.1 28.571 434 224 13 155 519 201 617 7.87e-39 153
Msa1088290 AT3G06980.1 29.175 473 268 17 76 519 326 760 1.01e-37 149
Msa1088290 AT3G53110.1 26.464 461 279 13 112 543 59 488 2.12e-37 145
Msa1088290 AT1G12770.2 27.316 421 255 8 144 520 110 523 4.17e-37 145
Msa1088290 AT1G12770.1 27.316 421 255 8 144 520 110 523 4.17e-37 145
Msa1088290 AT1G71280.2 32.840 338 170 13 146 471 17 309 2.88e-35 136
Msa1088290 AT1G71280.1 32.362 343 175 13 146 476 17 314 5.04e-35 138
Msa1088290 AT5G19210.2 29.121 364 203 13 164 497 96 434 2.32e-29 122
Msa1088290 AT4G15850.1 26.914 405 216 14 182 526 73 457 1.34e-28 120
Msa1088290 AT4G34910.1 27.136 398 234 10 144 498 46 430 1.66e-28 121
Msa1088290 AT1G51380.2 30.213 235 147 5 128 362 8 225 7.15e-28 114
Msa1088290 AT1G51380.4 30.568 229 142 5 128 356 8 219 2.94e-27 112
Msa1088290 AT1G51380.3 30.568 229 142 5 128 356 8 219 5.30e-27 112
Msa1088290 AT1G28180.2 45.299 117 61 1 174 290 3 116 5.78e-23 94.7
Msa1088290 AT5G19210.1 28.049 246 139 9 276 497 46 277 8.61e-17 82.0
Msa1088290 AT5G19210.3 28.049 246 139 9 276 497 46 277 8.61e-17 82.0
Msa1088290 AT1G59990.1 32.203 118 79 1 407 524 427 543 3.95e-14 75.9
Msa1088290 AT1G59990.2 32.203 118 79 1 407 524 427 543 4.02e-14 75.9
Msa1088290 AT1G27880.1 24.167 360 230 11 171 519 274 601 4.49e-12 69.7
Msa1088290 AT1G27880.2 24.167 360 230 11 171 519 274 601 8.78e-12 68.9

Find 247 sgRNAs with CRISPR-Local

Find 442 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAAGAAACGCCTTCAATTT+TGG 0.107084 7_3:+1343427 None:intergenic
GTCATAATTCCACTGATTAT+TGG 0.169636 7_3:+1342573 None:intergenic
AAACCAACCTGCTGGTTTAT+TGG 0.188033 7_3:+1342277 None:intergenic
GGTGGTCGTGGTGGTGGTTA+TGG 0.195984 7_3:-1342936 Msa1088290:CDS
GGAAATAGCGGTGGTGGATA+TGG 0.224387 7_3:-1338383 Msa1088290:CDS
GGTGGGTATGGTGGAGGATA+TGG 0.226026 7_3:-1338353 Msa1088290:CDS
TATATACTGTCTTAGGTATT+AGG 0.238341 7_3:-1338254 Msa1088290:three_prime_UTR
AAACAAACCTGTATCTCTTT+TGG 0.239901 7_3:+1341469 None:intergenic
GGTGCTGCTGGTGCAGGTGC+TGG 0.248580 7_3:+1343023 None:intergenic
ATAGCATTATATACTGTCTT+AGG 0.248960 7_3:-1338261 Msa1088290:three_prime_UTR
CCTTGCTGGAAGGGATTTGA+TGG 0.252328 7_3:-1342640 Msa1088290:CDS
CAAGCCAACATCATTACTTA+TGG 0.276012 7_3:-1338135 Msa1088290:three_prime_UTR
AACAAATCAACCAGCCTTCC+TGG 0.280880 7_3:+1341655 None:intergenic
GCTTGTGCGCAGACGGGTTC+AGG 0.311912 7_3:-1342618 Msa1088290:CDS
TCCTGCTCCTCTTGAGTAAC+AGG 0.324089 7_3:+1342843 None:intergenic
GTGGTCGTGGTGGTGGTTAT+GGG 0.326186 7_3:-1342935 Msa1088290:CDS
CACATCAGTAGCAACCAATA+TGG 0.326327 7_3:+1338748 None:intergenic
TTCCCAGCAACTACTATTCA+TGG 0.328013 7_3:-1340100 Msa1088290:CDS
GGCTGATAGGATGCTGGATA+TGG 0.328852 7_3:-1341581 Msa1088290:CDS
GGATATGGTGGTGGGTATGC+TGG 0.331530 7_3:-1338338 Msa1088290:CDS
TTCGCTGCACGTTCATCCTT+TGG 0.338007 7_3:-1338506 Msa1088290:CDS
CTTGAACGTACTCAACTCTT+TGG 0.345926 7_3:+1340890 None:intergenic
GCGATCTTCATGGGCTGATT+TGG 0.346074 7_3:-1343171 Msa1088290:CDS
CTCTTGCTGGATGCTTGTAT+TGG 0.346478 7_3:-1337776 Msa1088290:three_prime_UTR
AGGAAGGCTGGTTGATTTGT+TGG 0.354413 7_3:-1341653 Msa1088290:CDS
GAGTTTCACTGTCGATGATT+AGG 0.356718 7_3:-1341621 Msa1088290:CDS
GCAATTCCGATTTCCCTTGC+TGG 0.358836 7_3:-1342654 Msa1088290:CDS
GGGTATGGTGGAGGATATGG+TGG 0.365974 7_3:-1338350 Msa1088290:CDS
AACTCTTTGGTCAATTAAAT+CGG 0.368348 7_3:+1340903 None:intergenic
TTTCATACCAGACAGGGGTT+AGG 0.368632 7_3:-1342324 Msa1088290:CDS
CGTTCAGGAGGAGGCCGATT+TGG 0.370232 7_3:-1338467 Msa1088290:CDS
AGGCGCTTAATCAGAATATT+AGG 0.371626 7_3:-1342716 Msa1088290:CDS
TACATAATCATCAATGTCAT+TGG 0.372997 7_3:+1338670 None:intergenic
GGAGGAAAGAACCGCCGTTC+AGG 0.374297 7_3:-1338482 Msa1088290:CDS
TGATGCTTACGAGGATATTC+CGG 0.374320 7_3:-1342802 Msa1088290:CDS
TGGCGGTGTTGGTGCATTCT+CGG 0.377078 7_3:+1343133 None:intergenic
AGCTTTGACTTTAGTCTTTG+TGG 0.377942 7_3:-1340173 Msa1088290:CDS
GAAATAGCGGTGGTGGATAT+GGG 0.378936 7_3:-1338382 Msa1088290:CDS
TAATGAAAACAACACATCTA+TGG 0.379843 7_3:-1338591 Msa1088290:CDS
GGGGCTTCTGGTGGGTATGG+TGG 0.380906 7_3:-1338362 Msa1088290:CDS
GCTGGAAATAGCGCCGGTCC+TGG 0.381422 7_3:-1338320 Msa1088290:CDS
GGTGGATATGGGGCTTCTGG+TGG 0.388095 7_3:-1338371 Msa1088290:CDS
ATCTATTCTACCTCAGGCTC+AGG 0.389503 7_3:+1343470 None:intergenic
CATCCTATCAGCCTCATCTA+AGG 0.391228 7_3:+1341591 None:intergenic
CTGGAAATAGCGCCGGTCCT+GGG 0.392227 7_3:-1338319 Msa1088290:CDS
TTGATACTATGCGATCTTCA+TGG 0.393903 7_3:-1343181 Msa1088290:exon
GGTGGTGGATATGGGGCTTC+TGG 0.394612 7_3:-1338374 Msa1088290:CDS
AGCAAATCCATTTGCAGATC+AGG 0.397080 7_3:-1342880 Msa1088290:CDS
TCCCTTCCAGCAAGGGAAAT+CGG 0.397386 7_3:+1342648 None:intergenic
GTTAGGGTGGTTGTTGCTTA+CGG 0.398532 7_3:-1342307 Msa1088290:CDS
TAGAAAGATTGTTGAACAAA+TGG 0.399399 7_3:-1341542 Msa1088290:CDS
TATGGGGCTTCTGGTGGGTA+TGG 0.399921 7_3:-1338365 Msa1088290:CDS
GGAATTGCATGCCGCTGAAC+AGG 0.401326 7_3:+1342669 None:intergenic
GGTGCAGGTGCTGGTGCTGA+AGG 0.405023 7_3:+1343032 None:intergenic
GATGATTATGTACACCGTAT+TGG 0.405202 7_3:-1338659 Msa1088290:CDS
CTGCACAGAGGCCGCCTCGT+GGG 0.405380 7_3:-1342542 Msa1088290:CDS
CGATAACTCCGGATCGCGTT+GGG 0.405949 7_3:-1342994 Msa1088290:CDS
TATGGTGGAGGATATGGTGG+TGG 0.407720 7_3:-1338347 Msa1088290:CDS
ACATCAGTAGCAACCAATAT+GGG 0.412266 7_3:+1338749 None:intergenic
GCTTCTGGTGGGTATGGTGG+AGG 0.413902 7_3:-1338359 Msa1088290:CDS
GGAACAGAGGTGGTGGTGGT+TGG 0.417185 7_3:-1342914 Msa1088290:CDS
CTCTTGTTCTCTCGCCAACT+AGG 0.419822 7_3:-1342497 Msa1088290:CDS
GGTGGTGGTGGTCGTGGTGG+TGG 0.423551 7_3:-1342942 Msa1088290:CDS
CCACGAGGCGGCCTCTGTGC+AGG 0.425187 7_3:+1342543 None:intergenic
AGATGAGGAGGAACGTAAAC+AGG 0.426503 7_3:+1343068 None:intergenic
TTCATACCAGACAGGGGTTA+GGG 0.430328 7_3:-1342323 Msa1088290:CDS
TGTTGCAACTCCAGGAAGGC+TGG 0.431189 7_3:-1341665 Msa1088290:CDS
ATGGTGATTACTAACATATT+AGG 0.431590 7_3:-1338020 Msa1088290:three_prime_UTR
CAAGAGGAGCAGGAGAATAC+AGG 0.433370 7_3:-1342834 Msa1088290:CDS
AAAGCAGGTGCTGCTGGTGC+AGG 0.438000 7_3:+1343017 None:intergenic
TTGCTCTTTGTGCATGAAGA+AGG 0.438217 7_3:+1340839 None:intergenic
GCAGCAGAAGGTGGCGGTGT+TGG 0.438885 7_3:+1343122 None:intergenic
TATGGGAACAGAGGTGGTGG+TGG 0.439069 7_3:-1342918 Msa1088290:CDS
GAACAGAGGTGGTGGTGGTT+GGG 0.439117 7_3:-1342913 Msa1088290:CDS
TCACCATGAATAGTAGTTGC+TGG 0.448574 7_3:+1340097 None:intergenic
TAGCCTTAGATGAGGCTGAT+AGG 0.448823 7_3:-1341594 Msa1088290:CDS
CTCTCCCTGTCCTTCCAATA+CGG 0.450963 7_3:+1338645 None:intergenic
TTTCTGGCTGTTGGAAGAGT+GGG 0.454670 7_3:-1340934 Msa1088290:CDS
GCCTGTTACTCAAGAGGAGC+AGG 0.456084 7_3:-1342844 Msa1088290:CDS
TCCGATTTCCCTTGCTGGAA+GGG 0.456489 7_3:-1342649 Msa1088290:CDS
GAAAGTCACGGCCACCAAAT+CGG 0.458285 7_3:+1338453 None:intergenic
TTTAACATTTCCTACATGGA+TGG 0.459298 7_3:-1337844 Msa1088290:three_prime_UTR
TTTGATGGCTTGTGCGCAGA+CGG 0.462192 7_3:-1342625 Msa1088290:CDS
GTGGATATGGGGCTTCTGGT+GGG 0.464539 7_3:-1338370 Msa1088290:CDS
AACGATTACCGCGGTGGTGG+TGG 0.465638 7_3:-1342957 Msa1088290:CDS
GACATTCTTGTTGCAACTCC+AGG 0.467487 7_3:-1341673 Msa1088290:CDS
CGGAGGTGCCCAACGCGATC+CGG 0.468791 7_3:+1342986 None:intergenic
AACTTCAAATAAAGAGAGAA+AGG 0.469032 7_3:+1338191 None:intergenic
CAACCACCCTAACCCCTGTC+TGG 0.470522 7_3:+1342317 None:intergenic
ATAGTTTGTCTGACACCTGC+TGG 0.470533 7_3:+1341511 None:intergenic
TCCTGGGGTGACCAGTGCAT+GGG 0.473646 7_3:-1338303 Msa1088290:CDS
GTCCTGGGGTGACCAGTGCA+TGG 0.473952 7_3:-1338304 Msa1088290:CDS
GAATCATCCTGATCTGCAAA+TGG 0.473989 7_3:+1342873 None:intergenic
TGATACTATGCGATCTTCAT+GGG 0.476741 7_3:-1343180 Msa1088290:exon
TGCACAGAGGCCGCCTCGTG+GGG 0.477031 7_3:-1342541 Msa1088290:CDS
GGTTATGGGAACAGAGGTGG+TGG 0.477100 7_3:-1342921 Msa1088290:CDS
CAAAGAGCAAATGGCGTACA+AGG 0.477788 7_3:-1340826 Msa1088290:CDS
AGAAGTTGTGTAGTGTTAGC+AGG 0.478789 7_3:-1338051 Msa1088290:three_prime_UTR
TCGATAACTCCGGATCGCGT+TGG 0.484000 7_3:-1342995 Msa1088290:CDS
GATTACCGCGGTGGTGGTGG+TGG 0.484866 7_3:-1342954 Msa1088290:CDS
AGTCTTTGTGGAGACAAAGA+AGG 0.485926 7_3:-1340161 Msa1088290:CDS
TCATGGTGACAGGTCACAAC+AGG 0.489281 7_3:-1340083 Msa1088290:intron
TTATCGAAAGCAGGTGCTGC+TGG 0.490130 7_3:+1343011 None:intergenic
CTTCATGCACAAAGAGCAAA+TGG 0.491515 7_3:-1340835 Msa1088290:CDS
TGCACTGGTCACCCCAGGAC+CGG 0.491777 7_3:+1338307 None:intergenic
TCCATCCATCCCAAAATTGA+AGG 0.492933 7_3:-1343437 Msa1088290:five_prime_UTR
GAGCTGATGCGCTGGAACAC+TGG 0.498191 7_3:-1340138 Msa1088290:CDS
GAAGCAGCAGCAGAAGGTGG+CGG 0.500887 7_3:+1343116 None:intergenic
ATTTCCTACATGGATGGGTA+AGG 0.502508 7_3:-1337838 Msa1088290:three_prime_UTR
AACTAGGGAGCTATCGATGC+AGG 0.503242 7_3:-1342481 Msa1088290:intron
ACAGGGAGAGCAGGAAAGAA+AGG 0.503939 7_3:-1338632 Msa1088290:CDS
ACATAATCATCAATGTCATT+GGG 0.504262 7_3:+1338671 None:intergenic
GGTGGTTATGGGAACAGAGG+TGG 0.507683 7_3:-1342924 Msa1088290:CDS
TCCCATGCACTGGTCACCCC+AGG 0.510105 7_3:+1338302 None:intergenic
AAAGAAGGGAGCTGATGCGC+TGG 0.510762 7_3:-1340146 Msa1088290:CDS
GCTGCACGTTCATCCTTTGG+TGG 0.511407 7_3:-1338503 Msa1088290:CDS
TCAGGAGGAGGCCGATTTGG+TGG 0.511851 7_3:-1338464 Msa1088290:CDS
AAGAACCGCCGTTCAGGAGG+AGG 0.511872 7_3:-1338476 Msa1088290:CDS
ATGTGGTGAGGGGTTGATTG+AGG 0.514168 7_3:-1337929 Msa1088290:three_prime_UTR
TCAACAATCTTTCTAATCTG+TGG 0.514562 7_3:+1341550 None:intergenic
AGATGTAGAATATGTGGTGA+GGG 0.515636 7_3:-1337940 Msa1088290:three_prime_UTR
TTAACATTTCCTACATGGAT+GGG 0.516854 7_3:-1337843 Msa1088290:three_prime_UTR
GTACACCGTATTGGAAGGAC+AGG 0.521546 7_3:-1338650 Msa1088290:CDS
GCGAACCGCGAGAGCCAAGC+AGG 0.522473 7_3:+1338524 None:intergenic
GCAAAAGTATTCACCGGTGG+AGG 0.524079 7_3:+1342756 None:intergenic
TGTTGGTGCATTCTCGGCCG+CGG 0.525546 7_3:+1343139 None:intergenic
TGACAAGAGAAGCCATCTCA+TGG 0.529627 7_3:-1340863 Msa1088290:CDS
CCACCGCGGTAATCGTTCCT+AGG 0.530683 7_3:+1342963 None:intergenic
TTCCGATTTCCCTTGCTGGA+AGG 0.531502 7_3:-1342650 Msa1088290:CDS
TGCTGAGATTGATTTGGGCG+AGG 0.533864 7_3:-1342736 Msa1088290:CDS
CGCGTTGGGCACCTCCGCCT+AGG 0.535532 7_3:-1342980 Msa1088290:CDS
GGCCGTGACTTTCGAAGAGA+AGG 0.536463 7_3:-1338443 Msa1088290:CDS
TCTTGTTCTCTCGCCAACTA+GGG 0.537140 7_3:-1342496 Msa1088290:CDS
ATACACACCCACATGTCCCT+TGG 0.537196 7_3:+1338096 None:intergenic
CCTGCACAGAGGCCGCCTCG+TGG 0.537603 7_3:-1342543 Msa1088290:CDS
GCACGTTCATCCTTTGGTGG+AGG 0.538128 7_3:-1338500 Msa1088290:CDS
AGGAACGATTACCGCGGTGG+TGG 0.538214 7_3:-1342960 Msa1088290:CDS
GGTTCTGATTACCATGGTGC+AGG 0.539362 7_3:-1338404 Msa1088290:CDS
CACCATGAATAGTAGTTGCT+GGG 0.539374 7_3:+1340098 None:intergenic
CGGTAATCGTTCCTAGGCGG+AGG 0.539400 7_3:+1342969 None:intergenic
GGTGCAGGAAATAGCGGTGG+TGG 0.542275 7_3:-1338389 Msa1088290:CDS
ATTGGAAGGACAGGGAGAGC+AGG 0.544432 7_3:-1338641 Msa1088290:CDS
TGTGTAGTGTTAGCAGGTGT+TGG 0.549428 7_3:-1338045 Msa1088290:three_prime_UTR
TGCATCGATAGCTCCCTAGT+TGG 0.549761 7_3:+1342483 None:intergenic
AGCAAATGGCGTACAAGGAA+AGG 0.550127 7_3:-1340821 Msa1088290:intron
GCTGATAGGATGCTGGATAT+GGG 0.550426 7_3:-1341580 Msa1088290:CDS
TTGATGGCTTGTGCGCAGAC+GGG 0.550920 7_3:-1342624 Msa1088290:CDS
GAAATAACCACCGAAAATGT+TGG 0.551907 7_3:+1337970 None:intergenic
TAAACCATAAGTAATGATGT+TGG 0.554379 7_3:+1338131 None:intergenic
CAAATGGACATGCCTCCAGC+AGG 0.555699 7_3:-1341526 Msa1088290:CDS
GCATTAAGATCATTTAAAAG+TGG 0.555949 7_3:-1338779 Msa1088290:CDS
GAAGGCGCACCCTGAGCCTG+AGG 0.556445 7_3:-1343480 Msa1088290:five_prime_UTR
CATCAAATCCCTTCCAGCAA+GGG 0.556584 7_3:+1342641 None:intergenic
AAGTACCTGCTTGGCTCTCG+CGG 0.562257 7_3:-1338529 Msa1088290:CDS
AATAATCAGTGGAATTATGA+CGG 0.562685 7_3:-1342571 Msa1088290:CDS
CAACTACTATTCATGGTGAC+AGG 0.562813 7_3:-1340093 Msa1088290:CDS
AACAAGAGCAAGCGGACACA+CGG 0.562965 7_3:+1342512 None:intergenic
GCTAATCGCCAAGGGACATG+TGG 0.563601 7_3:-1338104 Msa1088290:three_prime_UTR
ACTTCAAATAAAGAGAGAAA+GGG 0.564240 7_3:+1338192 None:intergenic
ATAATCAGTGGAATTATGAC+GGG 0.564273 7_3:-1342570 Msa1088290:CDS
GTGCTGGTGCTGAAGGTCCA+CGG 0.565006 7_3:+1343039 None:intergenic
AAAACCCTGAAAATGGAGAA+AGG 0.565240 7_3:+1343360 None:intergenic
TGGTGGAAATGTTCCTCCAC+CGG 0.566056 7_3:-1342769 Msa1088290:CDS
TTTCCACCACTCGTCTCCAC+CGG 0.568311 7_3:+1342783 None:intergenic
GGGACATGTGGGTGTGTATG+TGG 0.569476 7_3:-1338092 Msa1088290:three_prime_UTR
TGGAAATAGCGCCGGTCCTG+GGG 0.571169 7_3:-1338318 Msa1088290:CDS
TTCAGATACACGAAGAGGCT+AGG 0.571605 7_3:-1342351 Msa1088290:intron
AGATGAGGCTGATAGGATGC+TGG 0.571680 7_3:-1341587 Msa1088290:CDS
ATGGTGGAGGATATGGTGGT+GGG 0.572911 7_3:-1338346 Msa1088290:CDS
CAAATCAAGAAGTACCTGCT+TGG 0.574468 7_3:-1338538 Msa1088290:CDS
GGGAGAAGATGTAGAATATG+TGG 0.575502 7_3:-1337946 Msa1088290:three_prime_UTR
AACGTAAACAGGTCGAGTGT+TGG 0.575532 7_3:+1343079 None:intergenic
CCATCAAATCCCTTCCAGCA+AGG 0.576291 7_3:+1342640 None:intergenic
GCATGCCGCTGAACAGGTGT+CGG 0.577393 7_3:+1342675 None:intergenic
GCGGTTCTTTCCTCCACCAA+AGG 0.578855 7_3:+1338490 None:intergenic
TTTACGTTCCTCCTCATCTG+AGG 0.579339 7_3:-1343064 Msa1088290:CDS
ATCTCAGCAAAAGTATTCAC+CGG 0.579776 7_3:+1342750 None:intergenic
CATATTGGTTGCTACTGATG+TGG 0.580918 7_3:-1338747 Msa1088290:CDS
GTCTTTGTGGAGACAAAGAA+GGG 0.581107 7_3:-1340160 Msa1088290:CDS
TGGTGCTCCAATAAACCAGC+AGG 0.584862 7_3:-1342284 Msa1088290:intron
TTAACAGAAGCAGCAGCAGA+AGG 0.586556 7_3:+1343110 None:intergenic
AATCATCGACAGTGAAACTC+TGG 0.587863 7_3:+1341624 None:intergenic
ATTATGTACACCGTATTGGA+AGG 0.588871 7_3:-1338655 Msa1088290:CDS
GATCCGGAGTTATCGAAAGC+AGG 0.589393 7_3:+1343002 None:intergenic
TGCAGATCAGGATGATTCTG+AGG 0.590279 7_3:-1342868 Msa1088290:CDS
AAGAGGAGCAGGAGAATACA+GGG 0.591173 7_3:-1342833 Msa1088290:CDS
GGCGAGAGAACAAGAGCAAG+CGG 0.592909 7_3:+1342504 None:intergenic
AACCTTCTCTTCGAAAGTCA+CGG 0.593383 7_3:+1338441 None:intergenic
TGATTTGGCTGCAAATTCCG+CGG 0.593942 7_3:-1343156 Msa1088290:CDS
CATCAGTAGCAACCAATATG+GGG 0.596151 7_3:+1338750 None:intergenic
GCAATGCCTGCAGGAAAGAG+AGG 0.597727 7_3:-1338804 Msa1088290:intron
GGGTATGCTGGAAATAGCGC+CGG 0.598506 7_3:-1338326 Msa1088290:CDS
GTTTACAACGCTAATCGCCA+AGG 0.598686 7_3:-1338113 Msa1088290:three_prime_UTR
GGAAAGAACCGCCGTTCAGG+AGG 0.601920 7_3:-1338479 Msa1088290:CDS
AAATAGCGGTGGTGGATATG+GGG 0.603867 7_3:-1338381 Msa1088290:CDS
GAAAATGGAGAAAGGAAGAG+AGG 0.605827 7_3:+1343368 None:intergenic
TGAGGAGCCTGTTACTCAAG+AGG 0.606228 7_3:-1342850 Msa1088290:CDS
ACAGAAGCAGCAGCAGAAGG+TGG 0.609445 7_3:+1343113 None:intergenic
CAGCTACGAGAGCTTGAGAG+AGG 0.609572 7_3:-1341700 Msa1088290:CDS
GCTACTGATGTGGCTGCACG+TGG 0.610943 7_3:-1338737 Msa1088290:CDS
GTGTTAGCAGGTGTTGGCAA+TGG 0.611267 7_3:-1338039 Msa1088290:three_prime_UTR
TTTGTTTCAGATACACGAAG+AGG 0.612799 7_3:-1342356 Msa1088290:intron
AGGGTGGTTGTTGCTTACGG+TGG 0.614559 7_3:-1342304 Msa1088290:CDS
GCACCTGCTTTCGATAACTC+CGG 0.616286 7_3:-1343005 Msa1088290:CDS
CTACACAACTTCTATTCGAG+TGG 0.623210 7_3:+1338061 None:intergenic
AAAACCTTACCCATCCATGT+AGG 0.623257 7_3:+1337834 None:intergenic
ATCGGCCTCCTCCTGAACGG+CGG 0.623410 7_3:+1338471 None:intergenic
TACCATGGTGCAGGAAATAG+CGG 0.626118 7_3:-1338395 Msa1088290:CDS
ATTCCGGTGGAGACGAGTGG+TGG 0.627247 7_3:-1342786 Msa1088290:CDS
AAGATGTAGAATATGTGGTG+AGG 0.627675 7_3:-1337941 Msa1088290:three_prime_UTR
TTCTTGTTGCAACTCCAGGA+AGG 0.627799 7_3:-1341669 Msa1088290:CDS
ACGAGAGCTTGAGAGAGGAG+TGG 0.631044 7_3:-1341695 Msa1088290:CDS
CCACGGTTCCTCAGATGAGG+AGG 0.633176 7_3:+1343056 None:intergenic
ATAATTTGAAAGGAAATCAG+AGG 0.635272 7_3:+1340960 None:intergenic
GATGTTGGCTTGAAAACACT+AGG 0.636987 7_3:+1338146 None:intergenic
TCTATTCTACCTCAGGCTCA+GGG 0.637543 7_3:+1343471 None:intergenic
CCTCCTCATCTGAGGAACCG+TGG 0.637971 7_3:-1343056 Msa1088290:CDS
GATAAACTTTGATGCTTACG+AGG 0.638411 7_3:-1342811 Msa1088290:CDS
TGCTTACGAGGATATTCCGG+TGG 0.638728 7_3:-1342799 Msa1088290:CDS
GGTCCACGGTTCCTCAGATG+AGG 0.639824 7_3:+1343053 None:intergenic
CACCGCTATTTCCTGCACCA+TGG 0.641692 7_3:+1338393 None:intergenic
ATACCAGACAGGGGTTAGGG+TGG 0.642202 7_3:-1342320 Msa1088290:CDS
CCTAGGAACGATTACCGCGG+TGG 0.645514 7_3:-1342963 Msa1088290:CDS
AAATAAAATAGAGAAAGAGA+AGG 0.647498 7_3:-1343498 None:intergenic
CAAATCGGCCTCCTCCTGAA+CGG 0.654518 7_3:+1338468 None:intergenic
CATGAAGAAGGTCCATGAGA+TGG 0.654546 7_3:+1340851 None:intergenic
TTGGCTTGAAAACACTAGGA+GGG 0.660677 7_3:+1338150 None:intergenic
GTTTGTCTGACACCTGCTGG+AGG 0.661568 7_3:+1341514 None:intergenic
TGAAGCCGACACCTGTTCAG+CGG 0.662139 7_3:-1342680 Msa1088290:CDS
GATATTCCGGTGGAGACGAG+TGG 0.668865 7_3:-1342789 Msa1088290:CDS
AGGGGTGGTTCTGATTACCA+TGG 0.669156 7_3:-1338410 Msa1088290:CDS
GTTGGCTTGAAAACACTAGG+AGG 0.671168 7_3:+1338149 None:intergenic
CTAATCGCCAAGGGACATGT+GGG 0.673532 7_3:-1338103 Msa1088290:three_prime_UTR
TTAACTACATGTGCAACATG+TGG 0.673678 7_3:+1338704 None:intergenic
TTTACAACGCTAATCGCCAA+GGG 0.677411 7_3:-1338112 Msa1088290:three_prime_UTR
CATGGTGCAGGAAATAGCGG+TGG 0.677728 7_3:-1338392 Msa1088290:CDS
ACGGTACGCACCCCACGAGG+CGG 0.682057 7_3:+1342531 None:intergenic
GATGTAGAATATGTGGTGAG+GGG 0.683102 7_3:-1337939 Msa1088290:three_prime_UTR
ATCAGTAGCAACCAATATGG+GGG 0.683355 7_3:+1338751 None:intergenic
TAGGTATCTAGCCTTAGATG+AGG 0.687328 7_3:-1341602 Msa1088290:CDS
CACACGGTACGCACCCCACG+AGG 0.696620 7_3:+1342528 None:intergenic
TCAGCAAAAGTATTCACCGG+TGG 0.697347 7_3:+1342753 None:intergenic
GGTGGTGGTTATGGGAACAG+AGG 0.710981 7_3:-1342927 Msa1088290:CDS
CCGCGGTAATCGTTCCTAGG+CGG 0.719043 7_3:+1342966 None:intergenic
TGACGGGACAGCCTGCACAG+AGG 0.753358 7_3:-1342554 Msa1088290:CDS
TACACCGTATTGGAAGGACA+GGG 0.770780 7_3:-1338649 Msa1088290:CDS
CCGCCTAGGAACGATTACCG+CGG 0.778227 7_3:-1342966 Msa1088290:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTGTTTTAAAAATTGTT+TGG - chr7_3:1341984-1342003 Msa1088290:intron 10.0%
!!! ATGATATTCATTTTAATTTG+TGG - chr7_3:1338780-1338799 Msa1088290:CDS 15.0%
!! ATACGCAAAAAATTAAAAAT+GGG + chr7_3:1338962-1338981 None:intergenic 15.0%
!! TATACGCAAAAAATTAAAAA+TGG + chr7_3:1338963-1338982 None:intergenic 15.0%
!!! TTTGTATTCAAATTTTTGTA+AGG + chr7_3:1339265-1339284 None:intergenic 15.0%
!! ATTCAAAAGTAAAATATGAT+TGG + chr7_3:1339436-1339455 None:intergenic 15.0%
!!! AAAATATAAATGTTTTGTAC+TGG + chr7_3:1339460-1339479 None:intergenic 15.0%
!!! TGTTTTTTTATTATGTGAAA+AGG - chr7_3:1339758-1339777 Msa1088290:intron 15.0%
!! AAAAAAAACGAATATAACAA+TGG + chr7_3:1340493-1340512 None:intergenic 15.0%
!!! CTTTTTTCTTTTATAAAATG+TGG - chr7_3:1340572-1340591 Msa1088290:intron 15.0%
!!! ATATTTGTATTGGTATTTTA+GGG - chr7_3:1340773-1340792 Msa1088290:intron 15.0%
!! AGGAAAAATTTAAGAATATA+TGG - chr7_3:1341408-1341427 Msa1088290:intron 15.0%
!! GGAAAAATTTAAGAATATAT+GGG - chr7_3:1341409-1341428 Msa1088290:intron 15.0%
!!! GTAAAATTAACACAAATTTT+AGG - chr7_3:1341682-1341701 Msa1088290:CDS 15.0%
!! ATTCCATTATTTAAATTCTT+AGG - chr7_3:1341929-1341948 Msa1088290:intron 15.0%
!!! TAACATTTTTTACAATTTCT+CGG + chr7_3:1342077-1342096 None:intergenic 15.0%
!! ATTATAAATCAAAAGCAATA+TGG + chr7_3:1342327-1342346 None:intergenic 15.0%
!! AAATGTTTGAATTCGATTTA+TGG - chr7_3:1337994-1338013 Msa1088290:three_prime_UTR 20.0%
!! TTTATCAAAAGTGATTATTC+AGG - chr7_3:1339004-1339023 Msa1088290:intron 20.0%
!! TTTGGTGAAATAATTCAATT+TGG - chr7_3:1339380-1339399 Msa1088290:intron 20.0%
!! CCAGAAAAATATAATTTGAA+AGG + chr7_3:1340262-1340281 None:intergenic 20.0%
!!! CCTTTCAAATTATATTTTTC+TGG - chr7_3:1340259-1340278 Msa1088290:intron 20.0%
!!! TTAAAATCATTTAAGTTTGC+TGG + chr7_3:1340614-1340633 None:intergenic 20.0%
!! AAATCTGTATAAATTCAATC+TGG - chr7_3:1340661-1340680 Msa1088290:intron 20.0%
!!! CATATTTGTATTGGTATTTT+AGG - chr7_3:1340772-1340791 Msa1088290:intron 20.0%
!! TGTTATAAAGACAAAGATAA+AGG + chr7_3:1341165-1341184 None:intergenic 20.0%
!! AAAGAAAATTGAGAAAACAT+GGG + chr7_3:1341241-1341260 None:intergenic 20.0%
!! AAAAGAAAATTGAGAAAACA+TGG + chr7_3:1341242-1341261 None:intergenic 20.0%
!!! TAAATTTTTCCTAATACAGT+AGG + chr7_3:1341400-1341419 None:intergenic 20.0%
!!! TTGTAAATTGAACACTTTTT+AGG + chr7_3:1341782-1341801 None:intergenic 20.0%
!!! TTTAAATAATGGAATGCAAA+TGG + chr7_3:1341924-1341943 None:intergenic 20.0%
!! GTTCCTAAGAATTTAAATAA+TGG + chr7_3:1341935-1341954 None:intergenic 20.0%
!!! AACATTTTTTACAATTTCTC+GGG + chr7_3:1342076-1342095 None:intergenic 20.0%
!! ACATAGGTAATTTAGTTATT+AGG - chr7_3:1342197-1342216 Msa1088290:intron 20.0%
!!! TTATTTTTGAGAGCATTTTT+AGG - chr7_3:1342349-1342368 Msa1088290:CDS 20.0%
!!! TATTTTTGAGAGCATTTTTA+GGG - chr7_3:1342350-1342369 Msa1088290:intron 20.0%
!! AAAAAATAAATCTATAGGTG+TGG + chr7_3:1342995-1343014 None:intergenic 20.0%
! AAAAATATCTATTCTACCTC+AGG + chr7_3:1337748-1337767 None:intergenic 25.0%
! AAAAAGTAAAACCCTGAAAA+TGG + chr7_3:1337859-1337878 None:intergenic 25.0%
!!! TTACTTTTTCATTTCAACAC+AGG - chr7_3:1337870-1337889 Msa1088290:three_prime_UTR 25.0%
!!! TTTTGTTTTCCAATAATCAG+TGG - chr7_3:1338627-1338646 Msa1088290:CDS 25.0%
! AATAATCAGTGGAATTATGA+CGG - chr7_3:1338638-1338657 Msa1088290:CDS 25.0%
!!! TTGTTGATTTCGTTCTTATT+TGG - chr7_3:1339362-1339381 Msa1088290:intron 25.0%
! TAGAAAGATTGTTGAACAAA+TGG - chr7_3:1339667-1339686 Msa1088290:intron 25.0%
! ATTACACACACATATATGAA+AGG + chr7_3:1339799-1339818 None:intergenic 25.0%
! GATTTCAAACAACATTCAAT+AGG + chr7_3:1339982-1340001 None:intergenic 25.0%
!! TTTCTAAGAATTAAGATGGA+AGG + chr7_3:1340067-1340086 None:intergenic 25.0%
! TTCCATCTTAATTCTTAGAA+AGG - chr7_3:1340066-1340085 Msa1088290:intron 25.0%
!! AACCTTTCTAAGAATTAAGA+TGG + chr7_3:1340071-1340090 None:intergenic 25.0%
! ATAATTTGAAAGGAAATCAG+AGG + chr7_3:1340252-1340271 None:intergenic 25.0%
!!! AATTATATTTTTCTGGCTGT+TGG - chr7_3:1340266-1340285 Msa1088290:intron 25.0%
! AACTCTTTGGTCAATTAAAT+CGG + chr7_3:1340309-1340328 None:intergenic 25.0%
! AAACGAATATAACAATGGAA+AGG + chr7_3:1340488-1340507 None:intergenic 25.0%
! TGTATAAATTCAATCTGGAT+GGG - chr7_3:1340666-1340685 Msa1088290:intron 25.0%
! AATTAAGACAACAGATTGTA+TGG + chr7_3:1340803-1340822 None:intergenic 25.0%
! TCAAAAACCTTAAACTTACA+TGG + chr7_3:1341197-1341216 None:intergenic 25.0%
! AATGTATTCACAAAGTAAAC+AGG + chr7_3:1341476-1341495 None:intergenic 25.0%
! GTAAAACTAACACAAAATTC+AGG + chr7_3:1341513-1341532 None:intergenic 25.0%
!!! GTACAATTGTTCACATTTTT+TGG - chr7_3:1341565-1341584 Msa1088290:CDS 25.0%
!!! AACAATTGTGTGCATTTTTT+TGG + chr7_3:1341629-1341648 None:intergenic 25.0%
! AATAATGTTCTCACAGTAAT+TGG - chr7_3:1341712-1341731 Msa1088290:intron 25.0%
! ATAATGTTCTCACAGTAATT+GGG - chr7_3:1341713-1341732 Msa1088290:intron 25.0%
! TTATGTGAAACTTATGCTTT+AGG + chr7_3:1341808-1341827 None:intergenic 25.0%
!!! TTCCTTTTTTAACAAGTGTT+TGG - chr7_3:1342036-1342055 Msa1088290:intron 25.0%
!! AACCAAACACTTGTTAAAAA+AGG + chr7_3:1342041-1342060 None:intergenic 25.0%
!!! ACATTTTTTACAATTTCTCG+GGG + chr7_3:1342075-1342094 None:intergenic 25.0%
!!! CTTTTTTTTAATGGCTTTCA+AGG + chr7_3:1342102-1342121 None:intergenic 25.0%
! TGAAAGCCATTAAAAAAAAG+TGG - chr7_3:1342102-1342121 Msa1088290:intron 25.0%
!!! CACAAACCACTTTTTTTTAA+TGG + chr7_3:1342111-1342130 None:intergenic 25.0%
! CAACTCTAATATGAATACAT+AGG - chr7_3:1342181-1342200 Msa1088290:intron 25.0%
! GCATTAAGATCATTTAAAAG+TGG - chr7_3:1342430-1342449 Msa1088290:intron 25.0%
! ACATAATCATCAATGTCATT+GGG + chr7_3:1342541-1342560 None:intergenic 25.0%
! TACATAATCATCAATGTCAT+TGG + chr7_3:1342542-1342561 None:intergenic 25.0%
! TAATGAAAACAACACATCTA+TGG - chr7_3:1342618-1342637 Msa1088290:CDS 25.0%
! ATAGCATTATATACTGTCTT+AGG - chr7_3:1342948-1342967 Msa1088290:CDS 25.0%
! TATATACTGTCTTAGGTATT+AGG - chr7_3:1342955-1342974 Msa1088290:CDS 25.0%
! GGGAGAAAAAATAAATCTAT+AGG + chr7_3:1343000-1343019 None:intergenic 25.0%
! ACTTCAAATAAAGAGAGAAA+GGG + chr7_3:1343020-1343039 None:intergenic 25.0%
! AACTTCAAATAAAGAGAGAA+AGG + chr7_3:1343021-1343040 None:intergenic 25.0%
! TAAACCATAAGTAATGATGT+TGG + chr7_3:1343081-1343100 None:intergenic 25.0%
! ATGGTGATTACTAACATATT+AGG - chr7_3:1343189-1343208 Msa1088290:intron 25.0%
!!! TCATTTTAACATTTCCTACA+TGG - chr7_3:1343361-1343380 Msa1088290:five_prime_UTR 25.0%
!!! TAAGGTTTTGTAATAGTTAG+TGG - chr7_3:1343389-1343408 Msa1088290:five_prime_UTR 25.0%
! AAAGAAACGCCTTCAATTTT+GGG + chr7_3:1337784-1337803 None:intergenic 30.0%
! AAAAGAAACGCCTTCAATTT+TGG + chr7_3:1337785-1337804 None:intergenic 30.0%
AATTCGATTTATGGAGTCTT+AGG - chr7_3:1338003-1338022 Msa1088290:three_prime_UTR 30.0%
! TACTTTTGCTGAGATTGATT+TGG - chr7_3:1338467-1338486 Msa1088290:CDS 30.0%
!! ACTTTTGCTGAGATTGATTT+GGG - chr7_3:1338468-1338487 Msa1088290:CDS 30.0%
! GTCATAATTCCACTGATTAT+TGG + chr7_3:1338639-1338658 None:intergenic 30.0%
ATAATCAGTGGAATTATGAC+GGG - chr7_3:1338639-1338658 Msa1088290:CDS 30.0%
!!! TGTTGATTCTGAATCTTTTG+TGG - chr7_3:1339159-1339178 Msa1088290:intron 30.0%
AAAACCTTGAATGTGACTTA+TGG + chr7_3:1339207-1339226 None:intergenic 30.0%
!!! GGTTTTGTTTTGTATATCAG+AGG - chr7_3:1339221-1339240 Msa1088290:intron 30.0%
TCAACAATCTTTCTAATCTG+TGG + chr7_3:1339662-1339681 None:intergenic 30.0%
! AAACAAACCTGTATCTCTTT+TGG + chr7_3:1339743-1339762 None:intergenic 30.0%
!! GATATGTCTAATTTGAGTTG+AGG - chr7_3:1340115-1340134 Msa1088290:CDS 30.0%
ATCACTATTTATATACCTCC+AGG + chr7_3:1340151-1340170 None:intergenic 30.0%
!! CCAAAAACACAGTTTTATAG+AGG + chr7_3:1340443-1340462 None:intergenic 30.0%
! CCTCTATAAAACTGTGTTTT+TGG - chr7_3:1340440-1340459 Msa1088290:intron 30.0%
CTGTATAAATTCAATCTGGA+TGG - chr7_3:1340665-1340684 Msa1088290:intron 30.0%
GCTGTATGTCATATTTGTAT+TGG - chr7_3:1340763-1340782 Msa1088290:intron 30.0%
AAGAAGACCATGTAAGTTTA+AGG - chr7_3:1341187-1341206 Msa1088290:intron 30.0%
ACACAAATATATAGGAGAGA+CGG + chr7_3:1341370-1341389 None:intergenic 30.0%
CTCTCCTATATATTTGTGTT+TGG - chr7_3:1341371-1341390 Msa1088290:intron 30.0%
GTAGCCAAACACAAATATAT+AGG + chr7_3:1341378-1341397 None:intergenic 30.0%
TATATGTCTGACAACTTGAT+TGG + chr7_3:1341439-1341458 None:intergenic 30.0%
!!! GTTAGTTTTACTTGCTAACA+AGG - chr7_3:1341522-1341541 Msa1088290:CDS 30.0%
AAAATATGCATGACAATACG+TGG - chr7_3:1341756-1341775 Msa1088290:intron 30.0%
AGCATAAGTTTCACATAAGA+TGG - chr7_3:1341810-1341829 Msa1088290:intron 30.0%
CTTATGTCAACTTATGCTTT+AGG + chr7_3:1341854-1341873 None:intergenic 30.0%
! AAGCATAAGTTGACATAAGA+TGG - chr7_3:1341855-1341874 Msa1088290:intron 30.0%
! AGCATAAGTTGACATAAGAT+GGG - chr7_3:1341856-1341875 Msa1088290:intron 30.0%
AAAGAATACTTGAAGGAATC+AGG + chr7_3:1341957-1341976 None:intergenic 30.0%
CCTAGTAAAAGAATACTTGA+AGG + chr7_3:1341964-1341983 None:intergenic 30.0%
! CCTTCAAGTATTCTTTTACT+AGG - chr7_3:1341961-1341980 Msa1088290:intron 30.0%
TGTCTCAAGGTTAATGTTAT+TGG - chr7_3:1342285-1342304 Msa1088290:CDS 30.0%
! AAGAGAAGGTTCTTTTAGTA+GGG - chr7_3:1342780-1342799 Msa1088290:CDS 30.0%
! CTTTCTGTAACCAACATTTT+CGG - chr7_3:1343229-1343248 Msa1088290:intron 30.0%
! AACATTTTCGGTGGTTATTT+CGG - chr7_3:1343241-1343260 Msa1088290:intron 30.0%
TTTAACATTTCCTACATGGA+TGG - chr7_3:1343365-1343384 Msa1088290:five_prime_UTR 30.0%
TTAACATTTCCTACATGGAT+GGG - chr7_3:1343366-1343385 Msa1088290:five_prime_UTR 30.0%
!! GTTTCTTTTGCTGTCGTTTA+GGG - chr7_3:1337796-1337815 Msa1088290:three_prime_UTR 35.0%
! TCTTCCTTTCTCCATTTTCA+GGG - chr7_3:1337845-1337864 Msa1088290:three_prime_UTR 35.0%
AAAACCCTGAAAATGGAGAA+AGG + chr7_3:1337852-1337871 None:intergenic 35.0%
TTGATACTATGCGATCTTCA+TGG - chr7_3:1338028-1338047 Msa1088290:three_prime_UTR 35.0%
TGATACTATGCGATCTTCAT+GGG - chr7_3:1338029-1338048 Msa1088290:three_prime_UTR 35.0%
GATAAACTTTGATGCTTACG+AGG - chr7_3:1338398-1338417 Msa1088290:CDS 35.0%
!! ATCTCAGCAAAAGTATTCAC+CGG + chr7_3:1338462-1338481 None:intergenic 35.0%
AGGCGCTTAATCAGAATATT+AGG - chr7_3:1338493-1338512 Msa1088290:CDS 35.0%
TTTGTTTCAGATACACGAAG+AGG - chr7_3:1338853-1338872 Msa1088290:intron 35.0%
AAGCATTATACCACTAGGTT+GGG + chr7_3:1339114-1339133 None:intergenic 35.0%
TAAGCATTATACCACTAGGT+TGG + chr7_3:1339115-1339134 None:intergenic 35.0%
CAACTAAGCATTATACCACT+AGG + chr7_3:1339119-1339138 None:intergenic 35.0%
!! CTGTATCTCTTTTGGAAAAG+TGG + chr7_3:1339735-1339754 None:intergenic 35.0%
! CACTTTTCCAAAAGAGATAC+AGG - chr7_3:1339733-1339752 Msa1088290:intron 35.0%
TCTAGCTGTTCTACTTCATT+GGG - chr7_3:1339838-1339857 Msa1088290:intron 35.0%
CAAATGTATCCATAGAGACA+AGG + chr7_3:1339899-1339918 None:intergenic 35.0%
AATAGGTGCATCTCTCTAAA+TGG + chr7_3:1339965-1339984 None:intergenic 35.0%
AAGAACACCAGATGCAAATA+TGG + chr7_3:1340029-1340048 None:intergenic 35.0%
! GTGCTGTTAGAGTTAAATAG+TGG - chr7_3:1340093-1340112 Msa1088290:CDS 35.0%
ATACATGCAGCAGTGTTAAA+CGG + chr7_3:1340528-1340547 None:intergenic 35.0%
CTGCATGTATGCATTTATCT+GGG - chr7_3:1340538-1340557 Msa1088290:intron 35.0%
GCATCGTGTGCTTAAAAAAA+GGG + chr7_3:1340716-1340735 None:intergenic 35.0%
TGCATCGTGTGCTTAAAAAA+AGG + chr7_3:1340717-1340736 None:intergenic 35.0%
! AGTTGCACATATATTTCTGC+TGG - chr7_3:1340886-1340905 Msa1088290:CDS 35.0%
! GAGTTTATTCTCTGAGAAAC+AGG + chr7_3:1340976-1340995 None:intergenic 35.0%
GACTATTGCATGCTTTACTT+TGG - chr7_3:1341002-1341021 Msa1088290:intron 35.0%
! AGCTTTGACTTTAGTCTTTG+TGG - chr7_3:1341036-1341055 Msa1088290:intron 35.0%
GTAAAAGTTTGCAATGCTCT+TGG - chr7_3:1341262-1341281 Msa1088290:intron 35.0%
GAAAGCAGTGGAAAATTCAT+GGG - chr7_3:1341284-1341303 Msa1088290:intron 35.0%
! TGAGGTAACCTTTTCTTGTT+TGG - chr7_3:1341311-1341330 Msa1088290:intron 35.0%
!! AACCTTTTCTTGTTTGGAGT+TGG - chr7_3:1341317-1341336 Msa1088290:intron 35.0%
TATATAGGAGAGACGGTTAA+TGG + chr7_3:1341363-1341382 None:intergenic 35.0%
! GCATAAGTTGACATAAGATG+GGG - chr7_3:1341857-1341876 Msa1088290:intron 35.0%
! TTTGGTTCACATGAAGCATA+AGG - chr7_3:1342002-1342021 Msa1088290:intron 35.0%
ATATGGATCATTGACGATGA+TGG - chr7_3:1342146-1342165 Msa1088290:intron 35.0%
TATGGATCATTGACGATGAT+GGG - chr7_3:1342147-1342166 Msa1088290:intron 35.0%
ACATCAGTAGCAACCAATAT+GGG + chr7_3:1342463-1342482 None:intergenic 35.0%
TTAACTACATGTGCAACATG+TGG + chr7_3:1342508-1342527 None:intergenic 35.0%
GATGATTATGTACACCGTAT+TGG - chr7_3:1342550-1342569 Msa1088290:CDS 35.0%
ATTATGTACACCGTATTGGA+AGG - chr7_3:1342554-1342573 Msa1088290:CDS 35.0%
! GAAGAGAAGGTTCTTTTAGT+AGG - chr7_3:1342779-1342798 Msa1088290:CDS 35.0%
! AGAGAAGGTTCTTTTAGTAG+GGG - chr7_3:1342781-1342800 Msa1088290:CDS 35.0%
CAAGCCAACATCATTACTTA+TGG - chr7_3:1343074-1343093 Msa1088290:CDS 35.0%
GAAATAACCACCGAAAATGT+TGG + chr7_3:1343242-1343261 None:intergenic 35.0%
!! ACATTTTCGGTGGTTATTTC+GGG - chr7_3:1343242-1343261 Msa1088290:intron 35.0%
AAGATGTAGAATATGTGGTG+AGG - chr7_3:1343268-1343287 Msa1088290:intron 35.0%
AGATGTAGAATATGTGGTGA+GGG - chr7_3:1343269-1343288 Msa1088290:intron 35.0%
! CTTTTCATTACAGTCGTATC+TGG - chr7_3:1343303-1343322 Msa1088290:intron 35.0%
GAATGAAAAAGTTCTCTTGC+TGG - chr7_3:1343420-1343439 Msa1088290:five_prime_UTR 35.0%
TCCATCCATCCCAAAATTGA+AGG - chr7_3:1337772-1337791 Msa1088290:three_prime_UTR 40.0%
!! AAACGCCTTCAATTTTGGGA+TGG + chr7_3:1337780-1337799 None:intergenic 40.0%
!! CGTTTCTTTTGCTGTCGTTT+AGG - chr7_3:1337795-1337814 Msa1088290:three_prime_UTR 40.0%
GAAAATGGAGAAAGGAAGAG+AGG + chr7_3:1337844-1337863 None:intergenic 40.0%
! CTCTTCCTTTCTCCATTTTC+AGG - chr7_3:1337844-1337863 Msa1088290:three_prime_UTR 40.0%
AGCAAATCCATTTGCAGATC+AGG - chr7_3:1338329-1338348 Msa1088290:CDS 40.0%
GAATCATCCTGATCTGCAAA+TGG + chr7_3:1338339-1338358 None:intergenic 40.0%
TGATGCTTACGAGGATATTC+CGG - chr7_3:1338407-1338426 Msa1088290:CDS 40.0%
! AGGAAGTTTTCATACCAGAC+AGG - chr7_3:1338878-1338897 Msa1088290:intron 40.0%
! GGAAGTTTTCATACCAGACA+GGG - chr7_3:1338879-1338898 Msa1088290:intron 40.0%
! GAAGTTTTCATACCAGACAG+GGG - chr7_3:1338880-1338899 Msa1088290:intron 40.0%
!! AAACCAACCTGCTGGTTTAT+TGG + chr7_3:1338935-1338954 None:intergenic 40.0%
CTGTCCATAAGTCACATTCA+AGG - chr7_3:1339200-1339219 Msa1088290:intron 40.0%
GTCATTCAAGAACAATACGC+TGG + chr7_3:1339414-1339433 None:intergenic 40.0%
AATCATCGACAGTGAAACTC+TGG + chr7_3:1339588-1339607 None:intergenic 40.0%
GAGTTTCACTGTCGATGATT+AGG - chr7_3:1339588-1339607 Msa1088290:intron 40.0%
!! TAGGTATCTAGCCTTAGATG+AGG - chr7_3:1339607-1339626 Msa1088290:intron 40.0%
CTCTAGCTGTTCTACTTCAT+TGG - chr7_3:1339837-1339856 Msa1088290:intron 40.0%
CTAGCTGTTCTACTTCATTG+GGG - chr7_3:1339839-1339858 Msa1088290:intron 40.0%
ATGTATCCATAGAGACAAGG+AGG + chr7_3:1339896-1339915 None:intergenic 40.0%
GTGCATTCCATATTTGCATC+TGG - chr7_3:1340019-1340038 Msa1088290:intron 40.0%
TAAGATGGAAGGAGCAATTG+AGG + chr7_3:1340056-1340075 None:intergenic 40.0%
AGTTGAGGCAATAAATTGCC+TGG - chr7_3:1340130-1340149 Msa1088290:CDS 40.0%
!! TGTCTCGTCTTTGACTTTTG+TGG - chr7_3:1340198-1340217 Msa1088290:intron 40.0%
CTTGAACGTACTCAACTCTT+TGG + chr7_3:1340322-1340341 None:intergenic 40.0%
TTGCTCTTTGTGCATGAAGA+AGG + chr7_3:1340373-1340392 None:intergenic 40.0%
CTTCATGCACAAAGAGCAAA+TGG - chr7_3:1340374-1340393 Msa1088290:intron 40.0%
!! CGTACAAGGAAAGGTATTCT+CGG - chr7_3:1340397-1340416 Msa1088290:intron 40.0%
GCTGCATGTATGCATTTATC+TGG - chr7_3:1340537-1340556 Msa1088290:intron 40.0%
TCGTGTGCTTAAAAAAAGGG+TGG + chr7_3:1340713-1340732 None:intergenic 40.0%
AATATATGTGCAACTGCCAG+AGG + chr7_3:1340881-1340900 None:intergenic 40.0%
! CACATATATTTCTGCTGGTG+TGG - chr7_3:1340891-1340910 Msa1088290:CDS 40.0%
GGTGTGGAAGAAATATAGCT+AGG - chr7_3:1340907-1340926 Msa1088290:CDS 40.0%
AGTCTTTGTGGAGACAAAGA+AGG - chr7_3:1341048-1341067 Msa1088290:intron 40.0%
GTCTTTGTGGAGACAAAGAA+GGG - chr7_3:1341049-1341068 Msa1088290:intron 40.0%
TTCCCAGCAACTACTATTCA+TGG - chr7_3:1341109-1341128 Msa1088290:intron 40.0%
CACCATGAATAGTAGTTGCT+GGG + chr7_3:1341114-1341133 None:intergenic 40.0%
TCACCATGAATAGTAGTTGC+TGG + chr7_3:1341115-1341134 None:intergenic 40.0%
CAACTACTATTCATGGTGAC+AGG - chr7_3:1341116-1341135 Msa1088290:intron 40.0%
GGAAAGCAGTGGAAAATTCA+TGG - chr7_3:1341283-1341302 Msa1088290:intron 40.0%
CACCAACTCCAAACAAGAAA+AGG + chr7_3:1341322-1341341 None:intergenic 40.0%
!! AGTTGGTGAAGTGTCAAGTT+GGG - chr7_3:1341334-1341353 Msa1088290:intron 40.0%
GTTTGGCTACCTACTGTATT+AGG - chr7_3:1341388-1341407 Msa1088290:intron 40.0%
TGTGAAGCACAAGCATCATA+TGG - chr7_3:1342129-1342148 Msa1088290:intron 40.0%
ATGGATCATTGACGATGATG+GGG - chr7_3:1342148-1342167 Msa1088290:intron 40.0%
TACCATAGACAAGAGTTCTG+GGG + chr7_3:1342240-1342259 None:intergenic 40.0%
CTACCATAGACAAGAGTTCT+GGG + chr7_3:1342241-1342260 None:intergenic 40.0%
ACTACCATAGACAAGAGTTC+TGG + chr7_3:1342242-1342261 None:intergenic 40.0%
ATCAGTAGCAACCAATATGG+GGG + chr7_3:1342461-1342480 None:intergenic 40.0%
CATCAGTAGCAACCAATATG+GGG + chr7_3:1342462-1342481 None:intergenic 40.0%
CACATCAGTAGCAACCAATA+TGG + chr7_3:1342464-1342483 None:intergenic 40.0%
! CATATTGGTTGCTACTGATG+TGG - chr7_3:1342462-1342481 Msa1088290:intron 40.0%
!! CAAATCAAGAAGTACCTGCT+TGG - chr7_3:1342671-1342690 Msa1088290:CDS 40.0%
AACCTTCTCTTCGAAAGTCA+CGG + chr7_3:1342771-1342790 None:intergenic 40.0%
! TTGGCTTGAAAACACTAGGA+GGG + chr7_3:1343062-1343081 None:intergenic 40.0%
!! GATGTTGGCTTGAAAACACT+AGG + chr7_3:1343066-1343085 None:intergenic 40.0%
TTTACAACGCTAATCGCCAA+GGG - chr7_3:1343097-1343116 Msa1088290:CDS 40.0%
CTACACAACTTCTATTCGAG+TGG + chr7_3:1343151-1343170 None:intergenic 40.0%
AGAAGTTGTGTAGTGTTAGC+AGG - chr7_3:1343158-1343177 Msa1088290:CDS 40.0%
! TCTGTAACCAACATTTTCGG+TGG - chr7_3:1343232-1343251 Msa1088290:intron 40.0%
!! CATTTTCGGTGGTTATTTCG+GGG - chr7_3:1343243-1343262 Msa1088290:intron 40.0%
GGGAGAAGATGTAGAATATG+TGG - chr7_3:1343263-1343282 Msa1088290:intron 40.0%
GATGTAGAATATGTGGTGAG+GGG - chr7_3:1343270-1343289 Msa1088290:intron 40.0%
ATTTCCTACATGGATGGGTA+AGG - chr7_3:1343371-1343390 Msa1088290:five_prime_UTR 40.0%
AAAACCTTACCCATCCATGT+AGG + chr7_3:1343378-1343397 None:intergenic 40.0%
TCTATTCTACCTCAGGCTCA+GGG + chr7_3:1337741-1337760 None:intergenic 45.0%
ATCTATTCTACCTCAGGCTC+AGG + chr7_3:1337742-1337761 None:intergenic 45.0%
!!! GCCTTCAATTTTGGGATGGA+TGG + chr7_3:1337776-1337795 None:intergenic 45.0%
GAGAGAGAAGAGAGAGAAGA+AGG + chr7_3:1337898-1337917 None:intergenic 45.0%
! TGATTTGGCTGCAAATTCCG+CGG - chr7_3:1338053-1338072 Msa1088290:three_prime_UTR 45.0%
TTAACAGAAGCAGCAGCAGA+AGG + chr7_3:1338102-1338121 None:intergenic 45.0%
AACGTAAACAGGTCGAGTGT+TGG + chr7_3:1338133-1338152 None:intergenic 45.0%
AGATGAGGAGGAACGTAAAC+AGG + chr7_3:1338144-1338163 None:intergenic 45.0%
TTTACGTTCCTCCTCATCTG+AGG - chr7_3:1338145-1338164 Msa1088290:three_prime_UTR 45.0%
TGCAGATCAGGATGATTCTG+AGG - chr7_3:1338341-1338360 Msa1088290:CDS 45.0%
AAGAGGAGCAGGAGAATACA+GGG - chr7_3:1338376-1338395 Msa1088290:CDS 45.0%
!! TCAGCAAAAGTATTCACCGG+TGG + chr7_3:1338459-1338478 None:intergenic 45.0%
CATCAAATCCCTTCCAGCAA+GGG + chr7_3:1338571-1338590 None:intergenic 45.0%
TCTTGTTCTCTCGCCAACTA+GGG - chr7_3:1338713-1338732 Msa1088290:CDS 45.0%
TTCAGATACACGAAGAGGCT+AGG - chr7_3:1338858-1338877 Msa1088290:intron 45.0%
TTTCATACCAGACAGGGGTT+AGG - chr7_3:1338885-1338904 Msa1088290:intron 45.0%
TTCATACCAGACAGGGGTTA+GGG - chr7_3:1338886-1338905 Msa1088290:intron 45.0%
! GTTAGGGTGGTTGTTGCTTA+CGG - chr7_3:1338902-1338921 Msa1088290:intron 45.0%
!! ACTAGGTTGGGTTAGCTATG+TGG + chr7_3:1339102-1339121 None:intergenic 45.0%
ACATAGCTAACCCAACCTAG+TGG - chr7_3:1339101-1339120 Msa1088290:intron 45.0%
GACATTCTTGTTGCAACTCC+AGG - chr7_3:1339536-1339555 Msa1088290:intron 45.0%
TTCTTGTTGCAACTCCAGGA+AGG - chr7_3:1339540-1339559 Msa1088290:intron 45.0%
AACAAATCAACCAGCCTTCC+TGG + chr7_3:1339557-1339576 None:intergenic 45.0%
!! AGGAAGGCTGGTTGATTTGT+TGG - chr7_3:1339556-1339575 Msa1088290:intron 45.0%
! TAGCCTTAGATGAGGCTGAT+AGG - chr7_3:1339615-1339634 Msa1088290:intron 45.0%
CATCCTATCAGCCTCATCTA+AGG + chr7_3:1339621-1339640 None:intergenic 45.0%
GCTGATAGGATGCTGGATAT+GGG - chr7_3:1339629-1339648 Msa1088290:intron 45.0%
! ATAGTTTGTCTGACACCTGC+TGG + chr7_3:1339701-1339720 None:intergenic 45.0%
AGACAAGGAGGCAAGAAAAG+CGG + chr7_3:1339884-1339903 None:intergenic 45.0%
TTCTTGCCTCCTTGTCTCTA+TGG - chr7_3:1339887-1339906 Msa1088290:intron 45.0%
TGAGGCAATAAATTGCCTGG+AGG - chr7_3:1340133-1340152 Msa1088290:CDS 45.0%
!!! TTTTCTGGCTGTTGGAAGAG+TGG - chr7_3:1340274-1340293 Msa1088290:intron 45.0%
!! TTTCTGGCTGTTGGAAGAGT+GGG - chr7_3:1340275-1340294 Msa1088290:intron 45.0%
TGACAAGAGAAGCCATCTCA+TGG - chr7_3:1340346-1340365 Msa1088290:intron 45.0%
CATGAAGAAGGTCCATGAGA+TGG + chr7_3:1340361-1340380 None:intergenic 45.0%
CAAAGAGCAAATGGCGTACA+AGG - chr7_3:1340383-1340402 Msa1088290:intron 45.0%
AGCAAATGGCGTACAAGGAA+AGG - chr7_3:1340388-1340407 Msa1088290:intron 45.0%
!! TCAATCTGGATGGGTTGTTC+TGG - chr7_3:1340675-1340694 Msa1088290:intron 45.0%
AGAGCTAAGACAGACAGACA+AGG + chr7_3:1340843-1340862 None:intergenic 45.0%
GGAAAATTCATGGGTGTGTG+AGG - chr7_3:1341293-1341312 Msa1088290:intron 45.0%
!! GAGTTGGTGAAGTGTCAAGT+TGG - chr7_3:1341333-1341352 Msa1088290:intron 45.0%
CATGACAATATGCAGGCTTG+TGG - chr7_3:1341884-1341903 Msa1088290:intron 45.0%
ACAATATGCAGGCTTGTGGA+TGG - chr7_3:1341888-1341907 Msa1088290:intron 45.0%
! TGGATCATTGACGATGATGG+GGG - chr7_3:1342149-1342168 Msa1088290:intron 45.0%
TTCCCCAGAACTCTTGTCTA+TGG - chr7_3:1342235-1342254 Msa1088290:intron 45.0%
GCAACAGCTATGTTGTCTCA+AGG - chr7_3:1342272-1342291 Msa1088290:intron 45.0%
! TGCAGGCATTGCAAAGTATG+AGG + chr7_3:1342397-1342416 None:intergenic 45.0%
TCATACTTTGCAATGCCTGC+AGG - chr7_3:1342396-1342415 Msa1088290:intron 45.0%
TACACCGTATTGGAAGGACA+GGG - chr7_3:1342560-1342579 Msa1088290:CDS 45.0%
! GAAGGTTCTTTTAGTAGGGG+TGG - chr7_3:1342784-1342803 Msa1088290:CDS 45.0%
TACCATGGTGCAGGAAATAG+CGG - chr7_3:1342814-1342833 Msa1088290:CDS 45.0%
!! GAAATAGCGGTGGTGGATAT+GGG - chr7_3:1342827-1342846 Msa1088290:CDS 45.0%
!! AAATAGCGGTGGTGGATATG+GGG - chr7_3:1342828-1342847 Msa1088290:CDS 45.0%
GAAAAATCAGTCCCATGCAC+TGG + chr7_3:1342920-1342939 None:intergenic 45.0%
!! GTTGGCTTGAAAACACTAGG+AGG + chr7_3:1343063-1343082 None:intergenic 45.0%
GTTTACAACGCTAATCGCCA+AGG - chr7_3:1343096-1343115 Msa1088290:CDS 45.0%
TGTGTAGTGTTAGCAGGTGT+TGG - chr7_3:1343164-1343183 Msa1088290:CDS 45.0%
CTCTTGCTGGATGCTTGTAT+TGG - chr7_3:1343433-1343452 Msa1088290:five_prime_UTR 45.0%
! GCGATCTTCATGGGCTGATT+TGG - chr7_3:1338038-1338057 Msa1088290:three_prime_UTR 50.0%
! TTATCGAAAGCAGGTGCTGC+TGG + chr7_3:1338201-1338220 None:intergenic 50.0%
GCACCTGCTTTCGATAACTC+CGG - chr7_3:1338204-1338223 Msa1088290:three_prime_UTR 50.0%
GATCCGGAGTTATCGAAAGC+AGG + chr7_3:1338210-1338229 None:intergenic 50.0%
TGAGGAGCCTGTTACTCAAG+AGG - chr7_3:1338359-1338378 Msa1088290:CDS 50.0%
TCCTGCTCCTCTTGAGTAAC+AGG + chr7_3:1338369-1338388 None:intergenic 50.0%
CAAGAGGAGCAGGAGAATAC+AGG - chr7_3:1338375-1338394 Msa1088290:CDS 50.0%
TGCTTACGAGGATATTCCGG+TGG - chr7_3:1338410-1338429 Msa1088290:CDS 50.0%
TGGTGGAAATGTTCCTCCAC+CGG - chr7_3:1338440-1338459 Msa1088290:CDS 50.0%
!! GCAAAAGTATTCACCGGTGG+AGG + chr7_3:1338456-1338475 None:intergenic 50.0%
!! TGCTGAGATTGATTTGGGCG+AGG - chr7_3:1338473-1338492 Msa1088290:CDS 50.0%
GCAATTCCGATTTCCCTTGC+TGG - chr7_3:1338555-1338574 Msa1088290:CDS 50.0%
TTCCGATTTCCCTTGCTGGA+AGG - chr7_3:1338559-1338578 Msa1088290:CDS 50.0%
TCCGATTTCCCTTGCTGGAA+GGG - chr7_3:1338560-1338579 Msa1088290:CDS 50.0%
TCCCTTCCAGCAAGGGAAAT+CGG + chr7_3:1338564-1338583 None:intergenic 50.0%
CCATCAAATCCCTTCCAGCA+AGG + chr7_3:1338572-1338591 None:intergenic 50.0%
CCTTGCTGGAAGGGATTTGA+TGG - chr7_3:1338569-1338588 Msa1088290:CDS 50.0%
! TTTGATGGCTTGTGCGCAGA+CGG - chr7_3:1338584-1338603 Msa1088290:CDS 50.0%
AACAAGAGCAAGCGGACACA+CGG + chr7_3:1338700-1338719 None:intergenic 50.0%
CTCTTGTTCTCTCGCCAACT+AGG - chr7_3:1338712-1338731 Msa1088290:CDS 50.0%
! TGCATCGATAGCTCCCTAGT+TGG + chr7_3:1338729-1338748 None:intergenic 50.0%
AACTAGGGAGCTATCGATGC+AGG - chr7_3:1338728-1338747 Msa1088290:CDS 50.0%
TGGTGCTCCAATAAACCAGC+AGG - chr7_3:1338925-1338944 Msa1088290:intron 50.0%
GCTCCAATAAACCAGCAGGT+TGG - chr7_3:1338929-1338948 Msa1088290:intron 50.0%
TGGGACATAAACCAACCTGC+TGG + chr7_3:1338943-1338962 None:intergenic 50.0%
AGATGAGGCTGATAGGATGC+TGG - chr7_3:1339622-1339641 Msa1088290:intron 50.0%
GGCTGATAGGATGCTGGATA+TGG - chr7_3:1339628-1339647 Msa1088290:intron 50.0%
GCGGAGAGACAAAGTCTAAC+TGG + chr7_3:1339865-1339884 None:intergenic 50.0%
!! CTGTCTGTCTTAGCTCTGTC+AGG - chr7_3:1340846-1340865 Msa1088290:CDS 50.0%
TGTCAGGTTATGCCAACCTC+TGG - chr7_3:1340862-1340881 Msa1088290:CDS 50.0%
TATGTGCAACTGCCAGAGGT+TGG + chr7_3:1340877-1340896 None:intergenic 50.0%
CACACGCGCGATAAGAAAAC+AGG + chr7_3:1340937-1340956 None:intergenic 50.0%
TCATGGTGACAGGTCACAAC+AGG - chr7_3:1341126-1341145 Msa1088290:intron 50.0%
GCAATGCTCTTGGAAAGCAG+TGG - chr7_3:1341272-1341291 Msa1088290:intron 50.0%
GGGTCAGCATGACAATATGC+AGG - chr7_3:1341877-1341896 Msa1088290:intron 50.0%
AAGTGGCAACACCCCCATAT+TGG - chr7_3:1342447-1342466 Msa1088290:intron 50.0%
GTACACCGTATTGGAAGGAC+AGG - chr7_3:1342559-1342578 Msa1088290:CDS 50.0%
CTCTCCCTGTCCTTCCAATA+CGG + chr7_3:1342567-1342586 None:intergenic 50.0%
ACAGGGAGAGCAGGAAAGAA+AGG - chr7_3:1342577-1342596 Msa1088290:CDS 50.0%
GAAAGTCACGGCCACCAAAT+CGG + chr7_3:1342759-1342778 None:intergenic 50.0%
!! AGGGGTGGTTCTGATTACCA+TGG - chr7_3:1342799-1342818 Msa1088290:CDS 50.0%
! GGTTCTGATTACCATGGTGC+AGG - chr7_3:1342805-1342824 Msa1088290:CDS 50.0%
!! GGAAATAGCGGTGGTGGATA+TGG - chr7_3:1342826-1342845 Msa1088290:CDS 50.0%
! TATGGTGGAGGATATGGTGG+TGG - chr7_3:1342862-1342881 Msa1088290:CDS 50.0%
! ATGGTGGAGGATATGGTGGT+GGG - chr7_3:1342863-1342882 Msa1088290:CDS 50.0%
CTAATCGCCAAGGGACATGT+GGG - chr7_3:1343106-1343125 Msa1088290:CDS 50.0%
ATACACACCCACATGTCCCT+TGG + chr7_3:1343116-1343135 None:intergenic 50.0%
!! GTGTTAGCAGGTGTTGGCAA+TGG - chr7_3:1343170-1343189 Msa1088290:CDS 50.0%
! ATGTGGTGAGGGGTTGATTG+AGG - chr7_3:1343280-1343299 Msa1088290:intron 50.0%
!! TGGCGGTGTTGGTGCATTCT+CGG + chr7_3:1338079-1338098 None:intergenic 55.0%
ACAGAAGCAGCAGCAGAAGG+TGG + chr7_3:1338099-1338118 None:intergenic 55.0%
TCGATAACTCCGGATCGCGT+TGG - chr7_3:1338214-1338233 Msa1088290:three_prime_UTR 55.0%
CGATAACTCCGGATCGCGTT+GGG - chr7_3:1338215-1338234 Msa1088290:three_prime_UTR 55.0%
!! GTGGTCGTGGTGGTGGTTAT+GGG - chr7_3:1338274-1338293 Msa1088290:three_prime_UTR 55.0%
! GGTGGTGGTTATGGGAACAG+AGG - chr7_3:1338282-1338301 Msa1088290:exon 55.0%
GGTGGTTATGGGAACAGAGG+TGG - chr7_3:1338285-1338304 Msa1088290:exon 55.0%
GGTTATGGGAACAGAGGTGG+TGG - chr7_3:1338288-1338307 Msa1088290:exon 55.0%
! TATGGGAACAGAGGTGGTGG+TGG - chr7_3:1338291-1338310 Msa1088290:exon 55.0%
!! GAACAGAGGTGGTGGTGGTT+GGG - chr7_3:1338296-1338315 Msa1088290:exon 55.0%
GCCTGTTACTCAAGAGGAGC+AGG - chr7_3:1338365-1338384 Msa1088290:CDS 55.0%
GATATTCCGGTGGAGACGAG+TGG - chr7_3:1338420-1338439 Msa1088290:CDS 55.0%
TTTCCACCACTCGTCTCCAC+CGG + chr7_3:1338429-1338448 None:intergenic 55.0%
TGAAGCCGACACCTGTTCAG+CGG - chr7_3:1338529-1338548 Msa1088290:CDS 55.0%
GGAATTGCATGCCGCTGAAC+AGG + chr7_3:1338543-1338562 None:intergenic 55.0%
! TTGATGGCTTGTGCGCAGAC+GGG - chr7_3:1338585-1338604 Msa1088290:CDS 55.0%
GGCGAGAGAACAAGAGCAAG+CGG + chr7_3:1338708-1338727 None:intergenic 55.0%
ATACCAGACAGGGGTTAGGG+TGG - chr7_3:1338889-1338908 Msa1088290:intron 55.0%
! AGGGTGGTTGTTGCTTACGG+TGG - chr7_3:1338905-1338924 Msa1088290:intron 55.0%
CAGCTACGAGAGCTTGAGAG+AGG - chr7_3:1339509-1339528 Msa1088290:intron 55.0%
ACGAGAGCTTGAGAGAGGAG+TGG - chr7_3:1339514-1339533 Msa1088290:intron 55.0%
TGTTGCAACTCCAGGAAGGC+TGG - chr7_3:1339544-1339563 Msa1088290:intron 55.0%
CAAATGGACATGCCTCCAGC+AGG - chr7_3:1339683-1339702 Msa1088290:intron 55.0%
GTTTGTCTGACACCTGCTGG+AGG + chr7_3:1339698-1339717 None:intergenic 55.0%
AAAGAAGGGAGCTGATGCGC+TGG - chr7_3:1341063-1341082 Msa1088290:intron 55.0%
GCAATGCCTGCAGGAAAGAG+AGG - chr7_3:1342405-1342424 Msa1088290:intron 55.0%
ATGCTGCCTCTCTTTCCTGC+AGG + chr7_3:1342414-1342433 None:intergenic 55.0%
ATTGGAAGGACAGGGAGAGC+AGG - chr7_3:1342568-1342587 Msa1088290:CDS 55.0%
! AAGTACCTGCTTGGCTCTCG+CGG - chr7_3:1342680-1342699 Msa1088290:CDS 55.0%
CAAATCGGCCTCCTCCTGAA+CGG + chr7_3:1342744-1342763 None:intergenic 55.0%
GGCCGTGACTTTCGAAGAGA+AGG - chr7_3:1342766-1342785 Msa1088290:CDS 55.0%
! CACCGCTATTTCCTGCACCA+TGG + chr7_3:1342819-1342838 None:intergenic 55.0%
CATGGTGCAGGAAATAGCGG+TGG - chr7_3:1342817-1342836 Msa1088290:CDS 55.0%
GTGGATATGGGGCTTCTGGT+GGG - chr7_3:1342839-1342858 Msa1088290:CDS 55.0%
! TATGGGGCTTCTGGTGGGTA+TGG - chr7_3:1342844-1342863 Msa1088290:CDS 55.0%
! GGTGGGTATGGTGGAGGATA+TGG - chr7_3:1342856-1342875 Msa1088290:CDS 55.0%
! GGGTATGGTGGAGGATATGG+TGG - chr7_3:1342859-1342878 Msa1088290:CDS 55.0%
!! GGATATGGTGGTGGGTATGC+TGG - chr7_3:1342871-1342890 Msa1088290:CDS 55.0%
GGGTATGCTGGAAATAGCGC+CGG - chr7_3:1342883-1342902 Msa1088290:CDS 55.0%
GCTAATCGCCAAGGGACATG+TGG - chr7_3:1343105-1343124 Msa1088290:CDS 55.0%
GGGACATGTGGGTGTGTATG+TGG - chr7_3:1343117-1343136 Msa1088290:CDS 55.0%
TGTTGGTGCATTCTCGGCCG+CGG + chr7_3:1338073-1338092 None:intergenic 60.0%
GAAGCAGCAGCAGAAGGTGG+CGG + chr7_3:1338096-1338115 None:intergenic 60.0%
CCACGGTTCCTCAGATGAGG+AGG + chr7_3:1338156-1338175 None:intergenic 60.0%
CCTCCTCATCTGAGGAACCG+TGG - chr7_3:1338153-1338172 Msa1088290:three_prime_UTR 60.0%
GGTCCACGGTTCCTCAGATG+AGG + chr7_3:1338159-1338178 None:intergenic 60.0%
! GTGCTGGTGCTGAAGGTCCA+CGG + chr7_3:1338173-1338192 None:intergenic 60.0%
!! AAAGCAGGTGCTGCTGGTGC+AGG + chr7_3:1338195-1338214 None:intergenic 60.0%
CGGTAATCGTTCCTAGGCGG+AGG + chr7_3:1338243-1338262 None:intergenic 60.0%
CCGCGGTAATCGTTCCTAGG+CGG + chr7_3:1338246-1338265 None:intergenic 60.0%
CCGCCTAGGAACGATTACCG+CGG - chr7_3:1338243-1338262 Msa1088290:three_prime_UTR 60.0%
CCACCGCGGTAATCGTTCCT+AGG + chr7_3:1338249-1338268 None:intergenic 60.0%
CCTAGGAACGATTACCGCGG+TGG - chr7_3:1338246-1338265 Msa1088290:three_prime_UTR 60.0%
AGGAACGATTACCGCGGTGG+TGG - chr7_3:1338249-1338268 Msa1088290:three_prime_UTR 60.0%
! AACGATTACCGCGGTGGTGG+TGG - chr7_3:1338252-1338271 Msa1088290:three_prime_UTR 60.0%
!! GGTGGTCGTGGTGGTGGTTA+TGG - chr7_3:1338273-1338292 Msa1088290:three_prime_UTR 60.0%
!! GGAACAGAGGTGGTGGTGGT+TGG - chr7_3:1338295-1338314 Msa1088290:exon 60.0%
ATTCCGGTGGAGACGAGTGG+TGG - chr7_3:1338423-1338442 Msa1088290:CDS 60.0%
GCATGCCGCTGAACAGGTGT+CGG + chr7_3:1338537-1338556 None:intergenic 60.0%
CAACCACCCTAACCCCTGTC+TGG + chr7_3:1338895-1338914 None:intergenic 60.0%
GAGCTGATGCGCTGGAACAC+TGG - chr7_3:1341071-1341090 Msa1088290:intron 60.0%
GCTACTGATGTGGCTGCACG+TGG - chr7_3:1342472-1342491 Msa1088290:intron 60.0%
GGAGGAAAGAACCGCCGTTC+AGG - chr7_3:1342727-1342746 Msa1088290:CDS 60.0%
GGAAAGAACCGCCGTTCAGG+AGG - chr7_3:1342730-1342749 Msa1088290:CDS 60.0%
AAGAACCGCCGTTCAGGAGG+AGG - chr7_3:1342733-1342752 Msa1088290:CDS 60.0%
CGTTCAGGAGGAGGCCGATT+TGG - chr7_3:1342742-1342761 Msa1088290:CDS 60.0%
!! TCAGGAGGAGGCCGATTTGG+TGG - chr7_3:1342745-1342764 Msa1088290:CDS 60.0%
GGTGCAGGAAATAGCGGTGG+TGG - chr7_3:1342820-1342839 Msa1088290:CDS 60.0%
!! GGTGGTGGATATGGGGCTTC+TGG - chr7_3:1342835-1342854 Msa1088290:CDS 60.0%
GGTGGATATGGGGCTTCTGG+TGG - chr7_3:1342838-1342857 Msa1088290:CDS 60.0%
! GCTTCTGGTGGGTATGGTGG+AGG - chr7_3:1342850-1342869 Msa1088290:CDS 60.0%
!! CTGGAAATAGCGCCGGTCCT+GGG - chr7_3:1342890-1342909 Msa1088290:CDS 60.0%
!! TGGAAATAGCGCCGGTCCTG+GGG - chr7_3:1342891-1342910 Msa1088290:CDS 60.0%
TCCTGGGGTGACCAGTGCAT+GGG - chr7_3:1342906-1342925 Msa1088290:CDS 60.0%
! GCAGCAGAAGGTGGCGGTGT+TGG + chr7_3:1338090-1338109 None:intergenic 65.0%
!! GGTGCAGGTGCTGGTGCTGA+AGG + chr7_3:1338180-1338199 None:intergenic 65.0%
!! GATTACCGCGGTGGTGGTGG+TGG - chr7_3:1338255-1338274 Msa1088290:three_prime_UTR 65.0%
! GCTTGTGCGCAGACGGGTTC+AGG - chr7_3:1338591-1338610 Msa1088290:CDS 65.0%
TGACGGGACAGCCTGCACAG+AGG - chr7_3:1338655-1338674 Msa1088290:CDS 65.0%
ATCGGCCTCCTCCTGAACGG+CGG + chr7_3:1342741-1342760 None:intergenic 65.0%
! GGGGCTTCTGGTGGGTATGG+TGG - chr7_3:1342847-1342866 Msa1088290:CDS 65.0%
!! GCTGGAAATAGCGCCGGTCC+TGG - chr7_3:1342889-1342908 Msa1088290:CDS 65.0%
! TGCACTGGTCACCCCAGGAC+CGG + chr7_3:1342905-1342924 None:intergenic 65.0%
GTCCTGGGGTGACCAGTGCA+TGG - chr7_3:1342905-1342924 Msa1088290:CDS 65.0%
! TCCCATGCACTGGTCACCCC+AGG + chr7_3:1342910-1342929 None:intergenic 65.0%
! GAAGGCGCACCCTGAGCCTG+AGG - chr7_3:1337729-1337748 Msa1088290:three_prime_UTR 70.0%
!! GGTGCTGCTGGTGCAGGTGC+TGG + chr7_3:1338189-1338208 None:intergenic 70.0%
!! CGGAGGTGCCCAACGCGATC+CGG + chr7_3:1338226-1338245 None:intergenic 70.0%
CACGACCACCACCACCACCG+CGG + chr7_3:1338263-1338282 None:intergenic 70.0%
!! GGTGGTGGTGGTGGTCGTGG+TGG - chr7_3:1338264-1338283 Msa1088290:three_prime_UTR 70.0%
!! GGTGGTGGTGGTCGTGGTGG+TGG - chr7_3:1338267-1338286 Msa1088290:three_prime_UTR 70.0%
CTGCACAGAGGCCGCCTCGT+GGG - chr7_3:1338667-1338686 Msa1088290:CDS 70.0%
TGCACAGAGGCCGCCTCGTG+GGG - chr7_3:1338668-1338687 Msa1088290:CDS 70.0%
ACGGTACGCACCCCACGAGG+CGG + chr7_3:1338681-1338700 None:intergenic 70.0%
CACACGGTACGCACCCCACG+AGG + chr7_3:1338684-1338703 None:intergenic 70.0%
GCGAACCGCGAGAGCCAAGC+AGG + chr7_3:1342688-1342707 None:intergenic 70.0%
CGCGTTGGGCACCTCCGCCT+AGG - chr7_3:1338229-1338248 Msa1088290:three_prime_UTR 75.0%
!! CGCGGTGGTGGTGGTGGTCG+TGG - chr7_3:1338261-1338280 Msa1088290:three_prime_UTR 75.0%
CCACGAGGCGGCCTCTGTGC+AGG + chr7_3:1338669-1338688 None:intergenic 75.0%
CCTGCACAGAGGCCGCCTCG+TGG - chr7_3:1338666-1338685 Msa1088290:CDS 75.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 1337723 1343508 1337723 ID=Msa1088290;Name=Msa1088290
chr7_3 mRNA 1337723 1343508 1337723 ID=Msa1088290-mRNA-1;Parent=Msa1088290;Name=Msa1088290-mRNA-1;_AED=0.28;_eAED=0.28;_QI=180|1|1|1|0.83|0.71|7|575|612
chr7_3 exon 1337723 1338813 1337723 ID=Msa1088290-mRNA-1:exon:568;Parent=Msa1088290-mRNA-1
chr7_3 exon 1340084 1340197 1340084 ID=Msa1088290-mRNA-1:exon:567;Parent=Msa1088290-mRNA-1
chr7_3 exon 1340822 1340989 1340822 ID=Msa1088290-mRNA-1:exon:566;Parent=Msa1088290-mRNA-1
chr7_3 exon 1341477 1341719 1341477 ID=Msa1088290-mRNA-1:exon:565;Parent=Msa1088290-mRNA-1
chr7_3 exon 1342285 1342368 1342285 ID=Msa1088290-mRNA-1:exon:564;Parent=Msa1088290-mRNA-1
chr7_3 exon 1342482 1343206 1342482 ID=Msa1088290-mRNA-1:exon:563;Parent=Msa1088290-mRNA-1
chr7_3 exon 1343340 1343508 1343340 ID=Msa1088290-mRNA-1:exon:562;Parent=Msa1088290-mRNA-1
chr7_3 five_prime_UTR 1343340 1343508 1343340 ID=Msa1088290-mRNA-1:five_prime_utr;Parent=Msa1088290-mRNA-1
chr7_3 five_prime_UTR 1343196 1343206 1343196 ID=Msa1088290-mRNA-1:five_prime_utr;Parent=Msa1088290-mRNA-1
chr7_3 CDS 1342482 1343195 1342482 ID=Msa1088290-mRNA-1:cds;Parent=Msa1088290-mRNA-1
chr7_3 CDS 1342285 1342368 1342285 ID=Msa1088290-mRNA-1:cds;Parent=Msa1088290-mRNA-1
chr7_3 CDS 1341477 1341719 1341477 ID=Msa1088290-mRNA-1:cds;Parent=Msa1088290-mRNA-1
chr7_3 CDS 1340822 1340989 1340822 ID=Msa1088290-mRNA-1:cds;Parent=Msa1088290-mRNA-1
chr7_3 CDS 1340084 1340197 1340084 ID=Msa1088290-mRNA-1:cds;Parent=Msa1088290-mRNA-1
chr7_3 CDS 1338298 1338813 1338298 ID=Msa1088290-mRNA-1:cds;Parent=Msa1088290-mRNA-1
chr7_3 three_prime_UTR 1337723 1338297 1337723 ID=Msa1088290-mRNA-1:three_prime_utr;Parent=Msa1088290-mRNA-1
Gene Sequence

>Msa1088290

ATGCGATCTTCATGGGCTGATTTGGCTGCAAATTCCGCGGCCGAGAATGCACCAACACCGCCACCTTCTGCTGCTGCTTCTGTTAACAATGCTGCCAACACTCGACCTGTTTACGTTCCTCCTCATCTGAGGAACCGTGGACCTTCAGCACCAGCACCTGCACCAGCAGCACCTGCTTTCGATAACTCCGGATCGCGTTGGGCACCTCCGCCTAGGAACGATTACCGCGGTGGTGGTGGTGGTCGTGGTGGTGGTTATGGGAACAGAGGTGGTGGTGGTTGGGATCGTCGTGAAGCAAATCCATTTGCAGATCAGGATGATTCTGAGGAGCCTGTTACTCAAGAGGAGCAGGAGAATACAGGGATAAACTTTGATGCTTACGAGGATATTCCGGTGGAGACGAGTGGTGGAAATGTTCCTCCACCGGTGAATACTTTTGCTGAGATTGATTTGGGCGAGGCGCTTAATCAGAATATTAGGCGATGTAAGTACGTGAAGCCGACACCTGTTCAGCGGCATGCAATTCCGATTTCCCTTGCTGGAAGGGATTTGATGGCTTGTGCGCAGACGGGTTCAGGAAAGACTGCTGCGTTTTGTTTTCCAATAATCAGTGGAATTATGACGGGACAGCCTGCACAGAGGCCGCCTCGTGGGGTGCGTACCGTGTGTCCGCTTGCTCTTGTTCTCTCGCCAACTAGGGAGCTATCGATGCAGATACACGAAGAGGCTAGGAAGTTTTCATACCAGACAGGGGTTAGGGTGGTTGTTGCTTACGGTGGTGCTCCAATAAACCAGCAGCTACGAGAGCTTGAGAGAGGAGTGGACATTCTTGTTGCAACTCCAGGAAGGCTGGTTGATTTGTTGGAAAGAGCCAGAGTTTCACTGTCGATGATTAGGTATCTAGCCTTAGATGAGGCTGATAGGATGCTGGATATGGGTTTTGAGCCACAGATTAGAAAGATTGTTGAACAAATGGACATGCCTCCAGCAGGTGTCAGACAAACTATGTTGTTCAGTGCCACTTTTCCAAAAGAGATACAGAGACTAGCCTCTGATTTCCTTTCAAATTATATTTTTCTGGCTGTTGGAAGAGTGGGATCAAGTACCGATTTAATTGACCAAAGAGTTGAGTACGTTCAAGAGTCTGACAAGAGAAGCCATCTCATGGACCTTCTTCATGCACAAAGAGCAAATGGCGTACAAGGAAAGCAAGCTTTGACTTTAGTCTTTGTGGAGACAAAGAAGGGAGCTGATGCGCTGGAACACTGGTTGTGTCTTAATAATTTCCCAGCAACTACTATTCATGGTGACAGGTCACAACAGGAAAGAGAGGCAGCATTAAGATCATTTAAAAGTGGCAACACCCCCATATTGGTTGCTACTGATGTGGCTGCACGTGGTCTTGACATACCACATGTTGCACATGTAGTTAACTTTGATCTTCCCAATGACATTGATGATTATGTACACCGTATTGGAAGGACAGGGAGAGCAGGAAAGAAAGGTCTTGCAACAGCGTTCTTTAATGAAAACAACACATCTATGGCAAGATCTCTACAAGATTTAATGCAAGAAGCAAATCAAGAAGTACCTGCTTGGCTCTCGCGGTTCGCTGCACGTTCATCCTTTGGTGGAGGAAAGAACCGCCGTTCAGGAGGAGGCCGATTTGGTGGCCGTGACTTTCGAAGAGAAGGTTCTTTTAGTAGGGGTGGTTCTGATTACCATGGTGCAGGAAATAGCGGTGGTGGATATGGGGCTTCTGGTGGGTATGGTGGAGGATATGGTGGTGGGTATGCTGGAAATAGCGCCGGTCCTGGGGTGACCAGTGCATGGGACTGA
Protein sequence

>Msa1088290

MRSSWADLAANSAAENAPTPPPSAAASVNNAANTRPVYVPPHLRNRGPSAPAPAPAAPAFDNSGSRWAPPPRNDYRGGGGGRGGGYGNRGGGGWDRREANPFADQDDSEEPVTQEEQENTGINFDAYEDIPVETSGGNVPPPVNTFAEIDLGEALNQNIRRCKYVKPTPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMTGQPAQRPPRGVRTVCPLALVLSPTRELSMQIHEEARKFSYQTGVRVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLSMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPAGVRQTMLFSATFPKEIQRLASDFLSNYIFLAVGRVGSSTDLIDQRVEYVQESDKRSHLMDLLHAQRANGVQGKQALTLVFVETKKGADALEHWLCLNNFPATTIHGDRSQQEREAALRSFKSGNTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKKGLATAFFNENNTSMARSLQDLMQEANQEVPAWLSRFAARSSFGGGKNRRSGGGRFGGRDFRREGSFSRGGSDYHGAGNSGGGYGASGGYGGGYGGGYAGNSAGPGVTSAWD*