Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0416510 | XP_003600872.1 | 96.815 | 628 | 16 | 2 | 1 | 626 | 1 | 626 | 0.0 | 1251 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0416510 | sp|Q9ZT48|ATE1_ARATH | 52.000 | 650 | 260 | 11 | 6 | 625 | 4 | 631 | 0.0 | 623 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0416510 | G7JB71 | 96.815 | 628 | 16 | 2 | 1 | 626 | 1 | 626 | 0.0 | 1251 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0060730 | Msa0416510 | -0.810595 | 1.065908e-50 | -8.615850e-47 |
| Msa0076290 | Msa0416510 | 0.824085 | 9.768560e-54 | -8.615850e-47 |
| Msa0168410 | Msa0416510 | -0.813046 | 3.120213e-51 | -8.615850e-47 |
| Msa0372000 | Msa0416510 | 0.900260 | 8.753750e-78 | -8.615850e-47 |
| Msa0416510 | Msa0437270 | 0.927348 | 1.331714e-91 | -8.615850e-47 |
| Msa0416510 | Msa0556230 | -0.832249 | 1.052756e-55 | -8.615850e-47 |
| Msa0416510 | Msa0596840 | 0.805148 | 1.535149e-49 | -8.615850e-47 |
| Msa0416510 | Msa0611540 | -0.810000 | 1.432943e-50 | -8.615850e-47 |
| Msa0416510 | Msa0656930 | 0.804321 | 2.285228e-49 | -8.615850e-47 |
| Msa0416510 | Msa0673120 | 0.839973 | 1.149709e-57 | -8.615850e-47 |
| Msa0416510 | Msa0674480 | 0.828517 | 8.601957e-55 | -8.615850e-47 |
| Msa0416510 | Msa0689250 | 0.815323 | 9.803782e-52 | -8.615850e-47 |
| Msa0416510 | Msa0833530 | 0.812306 | 4.531289e-51 | -8.615850e-47 |
| Msa0416510 | Msa0858390 | 0.832822 | 7.591036e-56 | -8.615850e-47 |
| Msa0416510 | Msa0878220 | 0.846856 | 1.669967e-59 | -8.615850e-47 |
| Msa0416510 | Msa0930270 | 0.806322 | 8.703993e-50 | -8.615850e-47 |
| Msa0416510 | Msa0943970 | 0.807386 | 5.183946e-50 | -8.615850e-47 |
| Msa0416510 | Msa0944020 | 0.824506 | 7.779513e-54 | -8.615850e-47 |
| Msa0416510 | Msa0965080 | 0.800804 | 1.213475e-48 | -8.615850e-47 |
| Msa0416510 | Msa0965290 | 0.808935 | 2.424831e-50 | -8.615850e-47 |
| Msa0416510 | Msa0967170 | 0.803740 | 3.017211e-49 | -8.615850e-47 |
| Msa0416510 | Msa0992510 | 0.804617 | 1.982559e-49 | -8.615850e-47 |
| Msa0416510 | Msa0999680 | 0.810062 | 1.389576e-50 | -8.615850e-47 |
| Msa0416510 | Msa1140630 | 0.802061 | 6.706886e-49 | -8.615850e-47 |
| Msa0416510 | Msa1159160 | 0.802108 | 6.560521e-49 | -8.615850e-47 |
| Msa0416510 | Msa1197130 | 0.802444 | 5.593871e-49 | -8.615850e-47 |
| Msa0416510 | Msa1213890 | 0.807677 | 4.497855e-50 | -8.615850e-47 |
| Msa0416510 | Msa1214750 | 0.807794 | 4.247624e-50 | -8.615850e-47 |
| Msa0416510 | Msa1217420 | 0.804313 | 2.293525e-49 | -8.615850e-47 |
| Msa0416510 | Msa1232700 | 0.814617 | 1.406516e-51 | -8.615850e-47 |
| Msa0416510 | Msa1236440 | 0.831305 | 1.800339e-55 | -8.615850e-47 |
| Msa0416510 | Msa1277670 | 0.839386 | 1.634096e-57 | -8.615850e-47 |
| Msa0416510 | Msa1325410 | -0.808061 | 3.725973e-50 | -8.615850e-47 |
| Msa0416510 | Msa1363820 | -0.841330 | 5.073716e-58 | -8.615850e-47 |
| Msa0416510 | Msa1419690 | 0.808607 | 2.850723e-50 | -8.615850e-47 |
| Msa0416510 | Msa1442920 | 0.816871 | 4.422129e-52 | -8.615850e-47 |
| Msa0416510 | Msa1452710 | 0.832143 | 1.118147e-55 | -8.615850e-47 |
| Msa0274980 | Msa0416510 | 0.802387 | 5.746311e-49 | -8.615850e-47 |
| Msa0315690 | Msa0416510 | 0.805272 | 1.446488e-49 | -8.615850e-47 |
| Msa0318680 | Msa0416510 | 0.800173 | 1.631579e-48 | -8.615850e-47 |
| Msa0349470 | Msa0416510 | 0.932683 | 5.889135e-95 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0416510 | MtrunA17_Chr3g0113281 | 96.815 | 628 | 16 | 2 | 1 | 626 | 1 | 626 | 0.0 | 1251 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0416510 | AT5G05700.1 | 52.000 | 650 | 260 | 11 | 6 | 625 | 4 | 631 | 0.0 | 623 |
| Msa0416510 | AT3G11240.1 | 52.194 | 638 | 258 | 12 | 1 | 625 | 1 | 604 | 0.0 | 603 |
| Msa0416510 | AT3G11240.3 | 51.864 | 590 | 242 | 10 | 44 | 625 | 6 | 561 | 0.0 | 558 |
| Msa0416510 | AT5G05700.2 | 50.692 | 578 | 236 | 10 | 75 | 625 | 1 | 556 | 0.0 | 530 |
| Msa0416510 | AT3G11240.4 | 51.173 | 469 | 195 | 8 | 164 | 625 | 4 | 445 | 2.52e-149 | 439 |
| Msa0416510 | AT3G11240.2 | 51.173 | 469 | 195 | 8 | 164 | 625 | 4 | 445 | 2.52e-149 | 439 |
| Msa0416510 | AT3G11240.5 | 51.173 | 469 | 195 | 8 | 164 | 625 | 4 | 445 | 2.52e-149 | 439 |
Find 159 sgRNAs with CRISPR-Local
Find 402 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTGAATTGTTTGAAGTATT+TGG | 0.169517 | 3_2:-63417084 | None:intergenic |
| GATTCAACAGTGAACATTTC+TGG | 0.176607 | 3_2:+63417501 | Msa0416510:CDS |
| TACTCTGCTCTTCAAGAAAT+TGG | 0.199151 | 3_2:+63417981 | Msa0416510:CDS |
| TTCTTGTGCATTTGCATATA+CGG | 0.212102 | 3_2:+63419577 | Msa0416510:three_prime_UTR |
| ACTCGACATTCTTCAATTTC+GGG | 0.215652 | 3_2:-63413914 | None:intergenic |
| CCAGCATTAGTTGCTGAATA+TGG | 0.218419 | 3_2:+63419628 | Msa0416510:three_prime_UTR |
| ATATACGGAATTTAATTTAA+TGG | 0.222822 | 3_2:+63419592 | Msa0416510:three_prime_UTR |
| CTATATAAAGCATATTCTTC+TGG | 0.228134 | 3_2:-63417693 | None:intergenic |
| TACTCGACATTCTTCAATTT+CGG | 0.228850 | 3_2:-63413915 | None:intergenic |
| TTCGGAAGAGATGAAAATTT+AGG | 0.238625 | 3_2:-63413891 | None:intergenic |
| CGATTCGTTGCAGACTTCTT+TGG | 0.247968 | 3_2:-63417615 | None:intergenic |
| TCCTTCTCACTATCTCTTGA+TGG | 0.258555 | 3_2:-63417429 | None:intergenic |
| ACAGTTCCTCCTTGTGGTTT+TGG | 0.260938 | 3_2:+63417828 | Msa0416510:CDS |
| TATCGAGTAAATATTTGTTC+TGG | 0.263562 | 3_2:+63417925 | Msa0416510:CDS |
| CAGCAACAACGCTTTCCTTT+GGG | 0.269424 | 3_2:-63413969 | None:intergenic |
| TTTGAAGTAGTTTCTATATC+AGG | 0.274161 | 3_2:-63418702 | None:intergenic |
| ACATTTCTGGTCTGTCTATC+AGG | 0.275790 | 3_2:+63417514 | Msa0416510:CDS |
| GTATGTGAAACGTATATTAA+TGG | 0.306750 | 3_2:-63417795 | None:intergenic |
| AAGTGACTTTGTTCCCTCTA+AGG | 0.312760 | 3_2:+63415839 | Msa0416510:CDS |
| TCAAATGGTGAACCAGAAAA+TGG | 0.316117 | 3_2:+63418720 | Msa0416510:CDS |
| TCGGAAGAGATGAAAATTTA+GGG | 0.319489 | 3_2:-63413890 | None:intergenic |
| GGGATTGTTCGATCTTTGAT+TGG | 0.329373 | 3_2:-63413870 | None:intergenic |
| AAGGATCTGCAAAGTGTATT+TGG | 0.341290 | 3_2:+63419263 | Msa0416510:intron |
| TTTCCATCAACAGTATTTAG+TGG | 0.347193 | 3_2:+63417854 | Msa0416510:CDS |
| TCGGACTTAAATATTGATAT+AGG | 0.347773 | 3_2:-63413702 | None:intergenic |
| ACCATTCTGACTGAAGCTTT+TGG | 0.357966 | 3_2:-63417276 | None:intergenic |
| CCTTGTCCCTTGACTTTGCT+CGG | 0.359889 | 3_2:-63417389 | None:intergenic |
| TCAGCAACAACGCTTTCCTT+TGG | 0.361381 | 3_2:-63413970 | None:intergenic |
| TTCTGTTAGCTCTTCTTGAT+CGG | 0.362879 | 3_2:+63415733 | Msa0416510:intron |
| TTAATATACGTTTCACATAC+TGG | 0.366580 | 3_2:+63417798 | Msa0416510:CDS |
| CATCCACTAAATACTGTTGA+TGG | 0.367065 | 3_2:-63417857 | None:intergenic |
| TCTGTTAGCTCTTCTTGATC+GGG | 0.371855 | 3_2:+63415734 | Msa0416510:intron |
| TACACGAAGTTGTTCCTTAG+AGG | 0.382550 | 3_2:-63415853 | None:intergenic |
| ATCGAGTAAATATTTGTTCT+GGG | 0.383663 | 3_2:+63417926 | Msa0416510:CDS |
| TCTGCAACGAATCGTAATAT+TGG | 0.392297 | 3_2:+63417624 | Msa0416510:CDS |
| AGAAATGGTTGAATCTGAAT+TGG | 0.392690 | 3_2:+63418662 | Msa0416510:CDS |
| ATGGTAAATTAGTGGCAGTT+GGG | 0.392810 | 3_2:+63417877 | Msa0416510:CDS |
| CAGCTCCAGCTGCTGGATAC+AGG | 0.400677 | 3_2:-63419443 | None:intergenic |
| TAGCTCTTCTTGATCGGGGC+TGG | 0.413747 | 3_2:+63415739 | Msa0416510:intron |
| ACATTCTTCAATTTCGGGTT+CGG | 0.414367 | 3_2:-63413909 | None:intergenic |
| ATATTCTTCTGGATCAAAAC+TGG | 0.414826 | 3_2:-63417682 | None:intergenic |
| TGCACATGTTCACTGAGAAC+GGG | 0.420815 | 3_2:+63417229 | Msa0416510:CDS |
| GGATACAGGATCTTATTTGC+TGG | 0.421600 | 3_2:-63419429 | None:intergenic |
| TCATCTTCATCTTCATGCAT+TGG | 0.426710 | 3_2:-63418627 | None:intergenic |
| TGCCATTCCTAGAGACAAAT+GGG | 0.431593 | 3_2:-63419475 | None:intergenic |
| TTTGATCCCCATTTGTCTCT+AGG | 0.433714 | 3_2:+63419468 | Msa0416510:three_prime_UTR |
| AGAGATAGTGAGAAGGAGAA+TGG | 0.437181 | 3_2:+63417435 | Msa0416510:CDS |
| GATCGGGGCTGGAGAAGATC+TGG | 0.437268 | 3_2:+63415750 | Msa0416510:CDS |
| TATTTACTCGATAAACAGTT+AGG | 0.441413 | 3_2:-63417915 | None:intergenic |
| GTACTGGAGACTAGGACAAT+AGG | 0.443698 | 3_2:-63418024 | None:intergenic |
| TGCTCTTCAAGAAATTGGTT+GGG | 0.445508 | 3_2:+63417986 | Msa0416510:CDS |
| GAACCATGAGAGATGCTATT+GGG | 0.446557 | 3_2:-63414039 | None:intergenic |
| ACTGAACAATGAATTGAAAT+CGG | 0.447578 | 3_2:+63413839 | Msa0416510:five_prime_UTR |
| GATACAGGATCTTATTTGCT+GGG | 0.448971 | 3_2:-63419428 | None:intergenic |
| TTTAGTGGATGGTAAATTAG+TGG | 0.451470 | 3_2:+63417869 | Msa0416510:CDS |
| TGAAGATGAAGATGAAGAAA+TGG | 0.451588 | 3_2:+63418647 | Msa0416510:CDS |
| TCAAATTCAGCTCCAGCTGC+TGG | 0.453356 | 3_2:-63419450 | None:intergenic |
| TGCTTTCAAGCGGATTGTAT+AGG | 0.453379 | 3_2:-63415817 | None:intergenic |
| GGATTGTTCGATCTTTGATT+GGG | 0.453607 | 3_2:-63413869 | None:intergenic |
| GATATAGAAACTACTTCAAA+TGG | 0.453880 | 3_2:+63418705 | Msa0416510:CDS |
| ACCAAAAGCTTCAGTCAGAA+TGG | 0.453937 | 3_2:+63417275 | Msa0416510:CDS |
| AGTCTCCAGTACTATTATCT+TGG | 0.457037 | 3_2:+63418035 | Msa0416510:CDS |
| ATGCCATTCCTAGAGACAAA+TGG | 0.457435 | 3_2:-63419476 | None:intergenic |
| TGAACCATGAGAGATGCTAT+TGG | 0.459034 | 3_2:-63414040 | None:intergenic |
| AGTGATAGAAAGGCAAAGTC+TGG | 0.460759 | 3_2:-63417951 | None:intergenic |
| CTGCTCTTCAAGAAATTGGT+TGG | 0.462545 | 3_2:+63417985 | Msa0416510:CDS |
| TGGAGCATGATGGGTTGTTA+TGG | 0.468006 | 3_2:-63417116 | None:intergenic |
| ATAGAACATAAAATTGATTG+AGG | 0.477237 | 3_2:-63419712 | None:intergenic |
| GATTGTATAGGAAGGGCAAC+AGG | 0.478971 | 3_2:-63415805 | None:intergenic |
| TTCAGTCAGAATGGTTTCAC+AGG | 0.478971 | 3_2:+63417284 | Msa0416510:CDS |
| GGGTTTCATTTGACATTGCA+AGG | 0.480080 | 3_2:+63418457 | Msa0416510:CDS |
| CATCAACAGTATTTAGTGGA+TGG | 0.481200 | 3_2:+63417858 | Msa0416510:CDS |
| TAAAACTATTGCAGAAAAGC+TGG | 0.482141 | 3_2:+63417467 | Msa0416510:CDS |
| CAGAAATACAGGAGGGTTGT+CGG | 0.488102 | 3_2:+63419320 | Msa0416510:CDS |
| CATTTCTGGTCTGTCTATCA+GGG | 0.490558 | 3_2:+63417515 | Msa0416510:CDS |
| TGATCTTCAGCAACTTGAAG+TGG | 0.497795 | 3_2:-63418549 | None:intergenic |
| AGTAGCCAAGATAATAGTAC+TGG | 0.499159 | 3_2:-63418040 | None:intergenic |
| TGAAGTATTTGGTTCCTCCA+TGG | 0.500622 | 3_2:-63417073 | None:intergenic |
| AGTCACAGTTGCAGAAATAC+AGG | 0.501911 | 3_2:+63419309 | Msa0416510:CDS |
| AAGATCCTGTATCCAGCAGC+TGG | 0.502219 | 3_2:+63419438 | Msa0416510:three_prime_UTR |
| GATGGTAAATTAGTGGCAGT+TGG | 0.505487 | 3_2:+63417876 | Msa0416510:CDS |
| CCATATTCAGCAACTAATGC+TGG | 0.513454 | 3_2:-63419628 | None:intergenic |
| GATCTTCAGCAACTTGAAGT+GGG | 0.518193 | 3_2:-63418548 | None:intergenic |
| TCTTCTGACATGGAGCATGA+TGG | 0.520063 | 3_2:-63417126 | None:intergenic |
| TCGTGAGCAGCAGAGATACT+TGG | 0.521603 | 3_2:+63419286 | Msa0416510:CDS |
| GTACTTGCCTAGTGATAGAA+AGG | 0.522687 | 3_2:-63417961 | None:intergenic |
| AAAAGAAGGTATTAGCCAAT+GGG | 0.524221 | 3_2:+63417310 | Msa0416510:CDS |
| TATAGATGCAGCAACTTGAA+AGG | 0.525347 | 3_2:-63417364 | None:intergenic |
| TCCCCATTTGTCTCTAGGAA+TGG | 0.525816 | 3_2:+63419473 | Msa0416510:three_prime_UTR |
| GCTACTATATAAGAGGTCTT+CGG | 0.526478 | 3_2:-63417334 | None:intergenic |
| CTTGACCACTGTCATCAACC+TGG | 0.528218 | 3_2:-63418587 | None:intergenic |
| CTTCTGACATGGAGCATGAT+GGG | 0.528703 | 3_2:-63417125 | None:intergenic |
| TTTGGTAATTGAATACCAGA+TGG | 0.531867 | 3_2:-63417258 | None:intergenic |
| CTATATTGCTACTATATAAG+AGG | 0.536144 | 3_2:-63417341 | None:intergenic |
| AGAGGACATAGTAGCTCTGA+AGG | 0.537283 | 3_2:-63418107 | None:intergenic |
| TCTATCTGTTAGCAATAAAG+AGG | 0.539337 | 3_2:+63417152 | Msa0416510:CDS |
| TAAGAGGTCTTCGGACCCAT+TGG | 0.540930 | 3_2:-63417325 | None:intergenic |
| TCAAGACACTATGTTAAGCC+AGG | 0.546489 | 3_2:+63418569 | Msa0416510:CDS |
| TGGTTGGGTGAAAGATAACC+AGG | 0.546626 | 3_2:+63418001 | Msa0416510:CDS |
| TGGTAAATTAGTGGCAGTTG+GGG | 0.548028 | 3_2:+63417878 | Msa0416510:CDS |
| CAAAGTCACTTGCTTTCAAG+CGG | 0.550013 | 3_2:-63415827 | None:intergenic |
| GAGCGAATGGTCTACTCTCT+CGG | 0.557386 | 3_2:+63419356 | Msa0416510:CDS |
| TTCAAGCGGATTGTATAGGA+AGG | 0.557510 | 3_2:-63415813 | None:intergenic |
| GCAACGAATCGTAATATTGG+AGG | 0.558170 | 3_2:+63417627 | Msa0416510:CDS |
| ACACAGAAAGCTCATATCGC+AGG | 0.558720 | 3_2:+63417757 | Msa0416510:CDS |
| CACTGCATTATCAATCTGAT+CGG | 0.558763 | 3_2:-63417208 | None:intergenic |
| GAGAACGGGGAATTTCCATC+TGG | 0.560903 | 3_2:+63417243 | Msa0416510:CDS |
| GTGCACATGTTCACTGAGAA+CGG | 0.561725 | 3_2:+63417228 | Msa0416510:CDS |
| TCTTAGTTGAAGCGTCAAGT+TGG | 0.561794 | 3_2:+63419673 | Msa0416510:three_prime_UTR |
| CTGTCTATCAGGGCTTGCAA+TGG | 0.562657 | 3_2:+63417525 | Msa0416510:CDS |
| TCCAGTGTTATCCGAGCGAA+TGG | 0.566865 | 3_2:+63419343 | Msa0416510:CDS |
| ACACGAAGTTGTTCCTTAGA+GGG | 0.574435 | 3_2:-63415852 | None:intergenic |
| AGATAATAGTACTGGAGACT+AGG | 0.577677 | 3_2:-63418032 | None:intergenic |
| CATGCTGGCATATAGCCTTA+CGG | 0.578182 | 3_2:+63414340 | Msa0416510:CDS |
| CTGTTAGCTCTTCTTGATCG+GGG | 0.579685 | 3_2:+63415735 | Msa0416510:intron |
| GGAAAGCGTCGAAGCTCTTG+TGG | 0.580414 | 3_2:+63413997 | Msa0416510:CDS |
| GACTTTGCCTTTCTATCACT+AGG | 0.581918 | 3_2:+63417954 | Msa0416510:CDS |
| AGCAACAACGCTTTCCTTTG+GGG | 0.582980 | 3_2:-63413968 | None:intergenic |
| CTATAAACCGAGCAAAGTCA+AGG | 0.583219 | 3_2:+63417382 | Msa0416510:CDS |
| GAAAGCGTTGTTGCTGATTG+CGG | 0.585631 | 3_2:+63413976 | Msa0416510:CDS |
| GGAGACTAGGACAATAGGCC+TGG | 0.586272 | 3_2:-63418019 | None:intergenic |
| TCTCTCGGTTAATTATATCT+CGG | 0.586725 | 3_2:+63419371 | Msa0416510:exon |
| CTTGGTAGTCATACACCGTA+AGG | 0.588665 | 3_2:-63414355 | None:intergenic |
| ATCTGTTAGCAATAAAGAGG+TGG | 0.589633 | 3_2:+63417155 | Msa0416510:CDS |
| CCGAGCAAAGTCAAGGGACA+AGG | 0.590380 | 3_2:+63417389 | Msa0416510:CDS |
| ACCATCAAGAGATAGTGAGA+AGG | 0.595095 | 3_2:+63417428 | Msa0416510:CDS |
| GATAACACAGTTCCTCCTTG+TGG | 0.595810 | 3_2:+63417822 | Msa0416510:CDS |
| CGTCCCAATAGCATCTCTCA+TGG | 0.596130 | 3_2:+63414036 | Msa0416510:CDS |
| GGGATCCCGTGTGAGATACA+AGG | 0.598121 | 3_2:+63418773 | Msa0416510:CDS |
| TGTTAAAAGTGTTGATGCCA+TGG | 0.603051 | 3_2:+63417056 | Msa0416510:CDS |
| AGATAGAGATTCTTCTGACA+TGG | 0.604313 | 3_2:-63417136 | None:intergenic |
| ATCTTCAGCAACTTGAAGTG+GGG | 0.605213 | 3_2:-63418547 | None:intergenic |
| ATCATACCTTGTATCTCACA+CGG | 0.611139 | 3_2:-63418779 | None:intergenic |
| ATGATGGGTTGTTATGGACA+AGG | 0.611276 | 3_2:-63417110 | None:intergenic |
| TGAGAGATGCTATTGGGACG+AGG | 0.618053 | 3_2:-63414033 | None:intergenic |
| TCAGTCAGAATGGTTTCACA+GGG | 0.619527 | 3_2:+63417285 | Msa0416510:CDS |
| TAACGCTTTCTGTCAAGCAA+AGG | 0.626789 | 3_2:-63418480 | None:intergenic |
| ACCATTCGCTCGGATAACAC+TGG | 0.627386 | 3_2:-63419344 | None:intergenic |
| GCAAAGTCAAGGGACAAGGA+TGG | 0.632318 | 3_2:+63417393 | Msa0416510:CDS |
| GAAGAATGTCGAGTACGAAG+AGG | 0.633268 | 3_2:+63413923 | Msa0416510:exon |
| TATAAACCGAGCAAAGTCAA+GGG | 0.634803 | 3_2:+63417383 | Msa0416510:CDS |
| CACAGTTGCAGAAATACAGG+AGG | 0.636902 | 3_2:+63419312 | Msa0416510:CDS |
| ATACAGGATCTTATTTGCTG+GGG | 0.638032 | 3_2:-63419427 | None:intergenic |
| TCAAGCGGATTGTATAGGAA+GGG | 0.647018 | 3_2:-63415812 | None:intergenic |
| TGGAAAGAGCCAAAACCACA+AGG | 0.651081 | 3_2:-63417837 | None:intergenic |
| TAGCAGTAGCAAAACCCCAA+AGG | 0.653048 | 3_2:+63413954 | Msa0416510:CDS |
| TTAACTTACTGATAGCGAAG+AGG | 0.662453 | 3_2:-63418125 | None:intergenic |
| GAGAGAGTAGACCATTCGCT+CGG | 0.668897 | 3_2:-63419354 | None:intergenic |
| GTGTATCTAGACGAATGCAA+AGG | 0.675511 | 3_2:+63415871 | Msa0416510:CDS |
| TCATACCTTGTATCTCACAC+GGG | 0.681061 | 3_2:-63418778 | None:intergenic |
| GAGGACATAGTAGCTCTGAA+GGG | 0.681722 | 3_2:-63418106 | None:intergenic |
| GCACATGTTCACTGAGAACG+GGG | 0.681833 | 3_2:+63417230 | Msa0416510:CDS |
| TTAAGCCAGGTTGATGACAG+TGG | 0.699199 | 3_2:+63418582 | Msa0416510:CDS |
| CTTACGGTGTATGACTACCA+AGG | 0.718339 | 3_2:+63414356 | Msa0416510:CDS |
| GCCATTCCTAGAGACAAATG+GGG | 0.718410 | 3_2:-63419474 | None:intergenic |
| ACAGTTGCAGAAATACAGGA+GGG | 0.725694 | 3_2:+63419313 | Msa0416510:CDS |
| TAAAAGTGTTGATGCCATGG+AGG | 0.731690 | 3_2:+63417059 | Msa0416510:CDS |
| AAAGAGCCAAAACCACAAGG+AGG | 0.739577 | 3_2:-63417834 | None:intergenic |
| CAGTCAGAATGGTTTCACAG+GGG | 0.766259 | 3_2:+63417286 | Msa0416510:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTAAAATATATATTTTAT+AGG | + | chr3_2:63414795-63414814 | Msa0416510:intron | 0.0% |
| !! | TTAATTATAAATAAAAAAAA+TGG | - | chr3_2:63416780-63416799 | None:intergenic | 0.0% |
| !!! | TAAAATTCATGTTTTTTTTA+TGG | + | chr3_2:63414992-63415011 | Msa0416510:intron | 10.0% |
| !! | ATTATAAATAAAAAAAATGG+TGG | - | chr3_2:63416777-63416796 | None:intergenic | 10.0% |
| !! | TTGAAAAACAATAAATTTGT+CGG | - | chr3_2:63413724-63413743 | None:intergenic | 15.0% |
| !!! | TTTGAATTCTTTTCTTTTTT+TGG | - | chr3_2:63413810-63413829 | None:intergenic | 15.0% |
| !!! | AAAACCAAAACTTTTTTATT+GGG | - | chr3_2:63414139-63414158 | None:intergenic | 15.0% |
| !!! | AAAAACCAAAACTTTTTTAT+TGG | - | chr3_2:63414140-63414159 | None:intergenic | 15.0% |
| !! | AAAAAAAAAGAATTTCTTAC+TGG | + | chr3_2:63414226-63414245 | Msa0416510:intron | 15.0% |
| !! | AAAAAAAAGAATTTCTTACT+GGG | + | chr3_2:63414227-63414246 | Msa0416510:intron | 15.0% |
| !!! | AAGTAATTATGATACTTTTA+TGG | - | chr3_2:63414769-63414788 | None:intergenic | 15.0% |
| !!! | ACTTTTGATTTTTAAATTGA+TGG | + | chr3_2:63415929-63415948 | Msa0416510:intron | 15.0% |
| !! | ATGAAAATTGTAACATATAA+AGG | - | chr3_2:63416180-63416199 | None:intergenic | 15.0% |
| !!! | TTTTTGAATAGTAACATTTT+GGG | - | chr3_2:63417586-63417605 | None:intergenic | 15.0% |
| !!! | ATATACGGAATTTAATTTAA+TGG | + | chr3_2:63419592-63419611 | Msa0416510:three_prime_UTR | 15.0% |
| !!! | ATTCTTTTCTTTTTTTGGAA+TGG | - | chr3_2:63413805-63413824 | None:intergenic | 20.0% |
| !! | AAACAAATTCAACGAAATTA+GGG | - | chr3_2:63414084-63414103 | None:intergenic | 20.0% |
| !!! | AAAACCCAATAAAAAAGTTT+TGG | + | chr3_2:63414132-63414151 | Msa0416510:intron | 20.0% |
| !!! | TTTCTTTTTTTTCTTGTTAC+AGG | + | chr3_2:63414317-63414336 | Msa0416510:intron | 20.0% |
| !! | TATAAAAAAAAGTTGAGACA+AGG | + | chr3_2:63414878-63414897 | Msa0416510:intron | 20.0% |
| !!! | AAAAACATGAATTTTAAGTC+TGG | - | chr3_2:63414988-63415007 | None:intergenic | 20.0% |
| !!! | ACGTAAAGTTTTTGAAATTT+AGG | - | chr3_2:63415300-63415319 | None:intergenic | 20.0% |
| !!! | TGGAACTTTTATTTATAAAC+CGG | + | chr3_2:63415770-63415789 | Msa0416510:CDS | 20.0% |
| !!! | CTTTTTGAATAGTAACATTT+TGG | - | chr3_2:63417587-63417606 | None:intergenic | 20.0% |
| !! | GTTAACATTATCTATTTCAT+AGG | - | chr3_2:63418290-63418309 | None:intergenic | 20.0% |
| !! | AAATAAAATATCGGTAAGTA+GGG | - | chr3_2:63419031-63419050 | None:intergenic | 20.0% |
| !!! | ATTATGTGAACTTAAGTTTT+TGG | + | chr3_2:63419510-63419529 | Msa0416510:three_prime_UTR | 20.0% |
| !! | ATAGAACATAAAATTGATTG+AGG | - | chr3_2:63419715-63419734 | None:intergenic | 20.0% |
| ! | TCGGACTTAAATATTGATAT+AGG | - | chr3_2:63413705-63413724 | None:intergenic | 25.0% |
| ! | ACTGAACAATGAATTGAAAT+CGG | + | chr3_2:63413839-63413858 | Msa0416510:five_prime_UTR | 25.0% |
| ! | AACAAATTCAACGAAATTAG+GGG | - | chr3_2:63414083-63414102 | None:intergenic | 25.0% |
| ! | CAAACAAATTCAACGAAATT+AGG | - | chr3_2:63414085-63414104 | None:intergenic | 25.0% |
| !! | AATTTCGTTGAATTTGTTTG+CGG | + | chr3_2:63414085-63414104 | Msa0416510:intron | 25.0% |
| !!! | TTTTTAACTGAAACGTGAAT+TGG | + | chr3_2:63414155-63414174 | Msa0416510:intron | 25.0% |
| !!! | TTTTAACTGAAACGTGAATT+GGG | + | chr3_2:63414156-63414175 | Msa0416510:intron | 25.0% |
| !!! | CATGTTTTTTTTATGGATGA+TGG | + | chr3_2:63414999-63415018 | Msa0416510:intron | 25.0% |
| !!! | TTTTTTATGGATGATGGTAA+TGG | + | chr3_2:63415005-63415024 | Msa0416510:intron | 25.0% |
| !!! | TTTTTATGGATGATGGTAAT+GGG | + | chr3_2:63415006-63415025 | Msa0416510:intron | 25.0% |
| !! | TTTTGTTGATATCCTAACAT+AGG | + | chr3_2:63415088-63415107 | Msa0416510:intron | 25.0% |
| ! | TTTGTTGATATCCTAACATA+GGG | + | chr3_2:63415089-63415108 | Msa0416510:intron | 25.0% |
| !! | TAAGTAAAGATTCTTTGAAG+GGG | - | chr3_2:63415484-63415503 | None:intergenic | 25.0% |
| ! | CTAAGTAAAGATTCTTTGAA+GGG | - | chr3_2:63415485-63415504 | None:intergenic | 25.0% |
| ! | TCTAAGTAAAGATTCTTTGA+AGG | - | chr3_2:63415486-63415505 | None:intergenic | 25.0% |
| !!! | TTTTATTTATAAACCGGAGA+TGG | + | chr3_2:63415776-63415795 | Msa0416510:CDS | 25.0% |
| ! | CATCATTATAGACATGATAT+GGG | + | chr3_2:63416008-63416027 | Msa0416510:intron | 25.0% |
| ! | GAGATAAATATGAATTCGAT+AGG | - | chr3_2:63416242-63416261 | None:intergenic | 25.0% |
| ! | TCAGTAAAAGAATAAACCTT+TGG | + | chr3_2:63416509-63416528 | Msa0416510:intron | 25.0% |
| ! | CAGTAAAAGAATAAACCTTT+GGG | + | chr3_2:63416510-63416529 | Msa0416510:intron | 25.0% |
| !!! | ACACTTTTTTCTATTTTCTC+TGG | + | chr3_2:63416802-63416821 | Msa0416510:intron | 25.0% |
| ! | TTCTTGCTAAAATAAAGGAA+AGG | - | chr3_2:63416881-63416900 | None:intergenic | 25.0% |
| ! | GAAAGTTCTTGCTAAAATAA+AGG | - | chr3_2:63416886-63416905 | None:intergenic | 25.0% |
| !!! | TATTTTAGCAAGAACTTTCA+AGG | + | chr3_2:63416887-63416906 | Msa0416510:intron | 25.0% |
| ! | TGAATTGCATATAATAGAAG+GGG | - | chr3_2:63416939-63416958 | None:intergenic | 25.0% |
| ! | GTGAATTGCATATAATAGAA+GGG | - | chr3_2:63416940-63416959 | None:intergenic | 25.0% |
| ! | AGTGAATTGCATATAATAGA+AGG | - | chr3_2:63416941-63416960 | None:intergenic | 25.0% |
| ! | AAACAAATTGGAACATTTAC+GGG | - | chr3_2:63416981-63417000 | None:intergenic | 25.0% |
| ! | CAAACAAATTGGAACATTTA+CGG | - | chr3_2:63416982-63417001 | None:intergenic | 25.0% |
| !! | TCTGAATTGTTTGAAGTATT+TGG | - | chr3_2:63417087-63417106 | None:intergenic | 25.0% |
| ! | CTATATTGCTACTATATAAG+AGG | - | chr3_2:63417344-63417363 | None:intergenic | 25.0% |
| ! | CTATATAAAGCATATTCTTC+TGG | - | chr3_2:63417696-63417715 | None:intergenic | 25.0% |
| ! | GTATGTGAAACGTATATTAA+TGG | - | chr3_2:63417798-63417817 | None:intergenic | 25.0% |
| ! | TTAATATACGTTTCACATAC+TGG | + | chr3_2:63417798-63417817 | Msa0416510:CDS | 25.0% |
| ! | TATTTACTCGATAAACAGTT+AGG | - | chr3_2:63417918-63417937 | None:intergenic | 25.0% |
| ! | TATCGAGTAAATATTTGTTC+TGG | + | chr3_2:63417925-63417944 | Msa0416510:CDS | 25.0% |
| ! | ATCGAGTAAATATTTGTTCT+GGG | + | chr3_2:63417926-63417945 | Msa0416510:CDS | 25.0% |
| ! | AGAAGAAAAAAATCAAGCAA+CGG | - | chr3_2:63418362-63418381 | None:intergenic | 25.0% |
| !! | TTTGAAGTAGTTTCTATATC+AGG | - | chr3_2:63418705-63418724 | None:intergenic | 25.0% |
| ! | GATATAGAAACTACTTCAAA+TGG | + | chr3_2:63418705-63418724 | Msa0416510:CDS | 25.0% |
| ! | GTATGAAAAGGAAGAAATAT+AGG | - | chr3_2:63418959-63418978 | None:intergenic | 25.0% |
| !!! | TTGTCTTGGTAATATCTTTT+CGG | - | chr3_2:63418991-63419010 | None:intergenic | 25.0% |
| !! | GAGAAATTACAATTTTGTCT+TGG | - | chr3_2:63419005-63419024 | None:intergenic | 25.0% |
| ! | AATAAAATATCGGTAAGTAG+GGG | - | chr3_2:63419030-63419049 | None:intergenic | 25.0% |
| ! | CAAATAAAATATCGGTAAGT+AGG | - | chr3_2:63419032-63419051 | None:intergenic | 25.0% |
| !! | CTACTTACCGATATTTTATT+TGG | + | chr3_2:63419030-63419049 | Msa0416510:intron | 25.0% |
| ! | GTTACCTCCAAATAAAATAT+CGG | - | chr3_2:63419040-63419059 | None:intergenic | 25.0% |
| !!! | ATATTTTATTTGGAGGTAAC+CGG | + | chr3_2:63419040-63419059 | Msa0416510:intron | 25.0% |
| !!! | TTAGTTTTTCCTTAAACACA+TGG | - | chr3_2:63419099-63419118 | None:intergenic | 25.0% |
| TCGGAAGAGATGAAAATTTA+GGG | - | chr3_2:63413893-63413912 | None:intergenic | 30.0% | |
| TTCGGAAGAGATGAAAATTT+AGG | - | chr3_2:63413894-63413913 | None:intergenic | 30.0% | |
| TACTCGACATTCTTCAATTT+CGG | - | chr3_2:63413918-63413937 | None:intergenic | 30.0% | |
| TGTTTGGATTGTTGTGTTAT+AGG | + | chr3_2:63414251-63414270 | Msa0416510:intron | 30.0% | |
| TTAGAAGCCTATAAAGAAGA+GGG | - | chr3_2:63414630-63414649 | None:intergenic | 30.0% | |
| ATTAGAAGCCTATAAAGAAG+AGG | - | chr3_2:63414631-63414650 | None:intergenic | 30.0% | |
| ATTTGCCAACAAACCATTAT+AGG | + | chr3_2:63414687-63414706 | Msa0416510:intron | 30.0% | |
| GATACTTATAAGATGCTTCA+CGG | + | chr3_2:63414817-63414836 | Msa0416510:intron | 30.0% | |
| GCTTAATAACTAGATTAGCA+TGG | + | chr3_2:63415415-63415434 | Msa0416510:intron | 30.0% | |
| ! | AAGTAAAGATTCTTTGAAGG+GGG | - | chr3_2:63415483-63415502 | None:intergenic | 30.0% |
| TAAGCCTTCTCTATTTAAAG+AGG | - | chr3_2:63415523-63415542 | None:intergenic | 30.0% | |
| AAGGCTTATCTCATCTAAAA+AGG | + | chr3_2:63415535-63415554 | Msa0416510:intron | 30.0% | |
| AGGCTTATCTCATCTAAAAA+GGG | + | chr3_2:63415536-63415555 | Msa0416510:intron | 30.0% | |
| ATCAGCAAATCAATTTAGCT+TGG | - | chr3_2:63415677-63415696 | None:intergenic | 30.0% | |
| !! | TGATTTGCTGATATGACTTT+CGG | + | chr3_2:63415685-63415704 | Msa0416510:intron | 30.0% |
| ! | TTCAAGTTCAAAAGCTTTGT+TGG | + | chr3_2:63415985-63416004 | Msa0416510:intron | 30.0% |
| GCATCATTATAGACATGATA+TGG | + | chr3_2:63416007-63416026 | Msa0416510:intron | 30.0% | |
| TTATATCAGTCAAATGAGTG+AGG | - | chr3_2:63416069-63416088 | None:intergenic | 30.0% | |
| ACATATAAAGGAAACTCTGA+AGG | - | chr3_2:63416168-63416187 | None:intergenic | 30.0% | |
| ! | TGTTACAATTTTCATTCTCC+CGG | + | chr3_2:63416185-63416204 | Msa0416510:intron | 30.0% |
| TATTCAACTCGTATTCCAAA+AGG | - | chr3_2:63416722-63416741 | None:intergenic | 30.0% | |
| !!! | CTTTTTTCTATTTTCTCTGG+AGG | + | chr3_2:63416805-63416824 | Msa0416510:intron | 30.0% |
| TGCATCAATGTATTACCATA+AGG | + | chr3_2:63416845-63416864 | Msa0416510:intron | 30.0% | |
| TTTCAAGGAGGTTAAATACA+CGG | + | chr3_2:63416902-63416921 | Msa0416510:intron | 30.0% | |
| AATTGCATATAATAGAAGGG+GGG | - | chr3_2:63416937-63416956 | None:intergenic | 30.0% | |
| GAATTGCATATAATAGAAGG+GGG | - | chr3_2:63416938-63416957 | None:intergenic | 30.0% | |
| GAAAAGTGGAACAAACAAAT+TGG | - | chr3_2:63416993-63417012 | None:intergenic | 30.0% | |
| !! | TTTCTTCCTAGGTTTTTAGA+TGG | + | chr3_2:63417024-63417043 | Msa0416510:intron | 30.0% |
| ! | ATCAACACTTTTAACATCCA+AGG | - | chr3_2:63417052-63417071 | None:intergenic | 30.0% |
| TCTATCTGTTAGCAATAAAG+AGG | + | chr3_2:63417152-63417171 | Msa0416510:CDS | 30.0% | |
| ! | TTTGGTAATTGAATACCAGA+TGG | - | chr3_2:63417261-63417280 | None:intergenic | 30.0% |
| !! | AAAAAGAAGGTATTAGCCAA+TGG | + | chr3_2:63417309-63417328 | Msa0416510:CDS | 30.0% |
| !! | AAAAGAAGGTATTAGCCAAT+GGG | + | chr3_2:63417310-63417329 | Msa0416510:CDS | 30.0% |
| ! | AGCTTTTCTGCAATAGTTTT+AGG | - | chr3_2:63417468-63417487 | None:intergenic | 30.0% |
| TAAAACTATTGCAGAAAAGC+TGG | + | chr3_2:63417467-63417486 | Msa0416510:CDS | 30.0% | |
| ATATTCTTCTGGATCAAAAC+TGG | - | chr3_2:63417685-63417704 | None:intergenic | 30.0% | |
| TTTCCATCAACAGTATTTAG+TGG | + | chr3_2:63417854-63417873 | Msa0416510:CDS | 30.0% | |
| ! | TTTAGTGGATGGTAAATTAG+TGG | + | chr3_2:63417869-63417888 | Msa0416510:CDS | 30.0% |
| ! | TTTTGGATAAACTACAAGCA+TGG | - | chr3_2:63418185-63418204 | None:intergenic | 30.0% |
| ! | ACGTTTATGCACAAAGTTTT+TGG | - | chr3_2:63418202-63418221 | None:intergenic | 30.0% |
| TATAGTAGAAGACTATGAAG+AGG | - | chr3_2:63418322-63418341 | None:intergenic | 30.0% | |
| TTTCACATAATATAGGAGGT+GGG | - | chr3_2:63418403-63418422 | None:intergenic | 30.0% | |
| CTTGTTTCACATAATATAGG+AGG | - | chr3_2:63418407-63418426 | None:intergenic | 30.0% | |
| CTCCTATATTATGTGAAACA+AGG | + | chr3_2:63418405-63418424 | Msa0416510:intron | 30.0% | |
| !! | AGCCTTGTTTCACATAATAT+AGG | - | chr3_2:63418410-63418429 | None:intergenic | 30.0% |
| ! | GATGCTTCCATTTTACAAAA+TGG | + | chr3_2:63418516-63418535 | Msa0416510:CDS | 30.0% |
| ! | TGACTCTCCATTTTGTAAAA+TGG | - | chr3_2:63418526-63418545 | None:intergenic | 30.0% |
| TGAAGATGAAGATGAAGAAA+TGG | + | chr3_2:63418647-63418666 | Msa0416510:CDS | 30.0% | |
| ! | ATTTCAGCAAAGTTTTGCTA+GGG | + | chr3_2:63418745-63418764 | Msa0416510:CDS | 30.0% |
| ! | AAAGTTTTGCTAGGGATAAA+GGG | + | chr3_2:63418753-63418772 | Msa0416510:CDS | 30.0% |
| !! | CAACTAACATTTTCTAAGGA+TGG | - | chr3_2:63418857-63418876 | None:intergenic | 30.0% |
| ! | TTCGCAACTAACATTTTCTA+AGG | - | chr3_2:63418861-63418880 | None:intergenic | 30.0% |
| TGTTAGTTGCGAAAAATTGT+AGG | + | chr3_2:63418868-63418887 | Msa0416510:intron | 30.0% | |
| ATAGCGAGTATGTTTCAAAA+TGG | + | chr3_2:63418909-63418928 | Msa0416510:intron | 30.0% | |
| !! | TGTCTTGGTAATATCTTTTC+GGG | - | chr3_2:63418990-63419009 | None:intergenic | 30.0% |
| !! | CTTACCGATATTTTATTTGG+AGG | + | chr3_2:63419033-63419052 | Msa0416510:intron | 30.0% |
| !!! | CAACATGACTAGTTTTACAT+TGG | - | chr3_2:63419126-63419145 | None:intergenic | 30.0% |
| ATGATTTATTTGTCCCATTC+TGG | + | chr3_2:63419190-63419209 | Msa0416510:intron | 30.0% | |
| TCTCTCGGTTAATTATATCT+CGG | + | chr3_2:63419371-63419390 | Msa0416510:exon | 30.0% | |
| !!! | GAACTTAAGTTTTTGGTCAA+TGG | + | chr3_2:63419517-63419536 | Msa0416510:three_prime_UTR | 30.0% |
| TTCTTGTGCATTTGCATATA+CGG | + | chr3_2:63419577-63419596 | Msa0416510:three_prime_UTR | 30.0% | |
| GGATTGTTCGATCTTTGATT+GGG | - | chr3_2:63413872-63413891 | None:intergenic | 35.0% | |
| !! | ACATTCTTCAATTTCGGGTT+CGG | - | chr3_2:63413912-63413931 | None:intergenic | 35.0% |
| ACTCGACATTCTTCAATTTC+GGG | - | chr3_2:63413917-63413936 | None:intergenic | 35.0% | |
| ATTAGGGGAATTGAAGAGAA+AGG | - | chr3_2:63414068-63414087 | None:intergenic | 35.0% | |
| ! | AATTGGGTTGTTGTTGTAGT+TGG | + | chr3_2:63414172-63414191 | Msa0416510:intron | 35.0% |
| GAATTTCTTACTGGGTTGTT+TGG | + | chr3_2:63414235-63414254 | Msa0416510:intron | 35.0% | |
| TGTTTGACATTCTTTGTGCT+TGG | + | chr3_2:63414386-63414405 | Msa0416510:intron | 35.0% | |
| TGTGTTGTACCTATATGACA+TGG | + | chr3_2:63414521-63414540 | Msa0416510:intron | 35.0% | |
| TGTACCTATATGACATGGTT+TGG | + | chr3_2:63414526-63414545 | Msa0416510:intron | 35.0% | |
| AGTTCCAAACCATGTCATAT+AGG | - | chr3_2:63414533-63414552 | None:intergenic | 35.0% | |
| TAGAAGCCTATAAAGAAGAG+GGG | - | chr3_2:63414629-63414648 | None:intergenic | 35.0% | |
| TCCAAATGTGCTTATGCTTT+CGG | + | chr3_2:63414660-63414679 | Msa0416510:intron | 35.0% | |
| ACAAGGTTGTGATAATTCAG+TGG | + | chr3_2:63414895-63414914 | Msa0416510:intron | 35.0% | |
| TTGATATCCTAACATAGGGA+TGG | + | chr3_2:63415093-63415112 | Msa0416510:intron | 35.0% | |
| ACTTTACGTATCAGTGTATC+CGG | + | chr3_2:63415311-63415330 | Msa0416510:intron | 35.0% | |
| TCTAGTTATTAAGCCTGACT+CGG | - | chr3_2:63415409-63415428 | None:intergenic | 35.0% | |
| ACTAGTTCATTGTTCATTGG+AGG | - | chr3_2:63415449-63415468 | None:intergenic | 35.0% | |
| GGTACTAGTTCATTGTTCAT+TGG | - | chr3_2:63415452-63415471 | None:intergenic | 35.0% | |
| ! | AGTAAAGATTCTTTGAAGGG+GGG | - | chr3_2:63415482-63415501 | None:intergenic | 35.0% |
| CTTCTCTATTTAAAGAGGTC+GGG | - | chr3_2:63415518-63415537 | None:intergenic | 35.0% | |
| CCTTCTCTATTTAAAGAGGT+CGG | - | chr3_2:63415519-63415538 | None:intergenic | 35.0% | |
| GGCTTATCTCATCTAAAAAG+GGG | + | chr3_2:63415537-63415556 | Msa0416510:intron | 35.0% | |
| TAATAACTAGGATCGCAACA+GGG | - | chr3_2:63415598-63415617 | None:intergenic | 35.0% | |
| TTAATAACTAGGATCGCAAC+AGG | - | chr3_2:63415599-63415618 | None:intergenic | 35.0% | |
| TTGCGATCCTAGTTATTAAC+AGG | + | chr3_2:63415600-63415619 | Msa0416510:intron | 35.0% | |
| TACTGCTCCTGTTAATAACT+AGG | - | chr3_2:63415610-63415629 | None:intergenic | 35.0% | |
| ! | TTCTGTTAGCTCTTCTTGAT+CGG | + | chr3_2:63415733-63415752 | Msa0416510:intron | 35.0% |
| ATTACGTATCAGAGAGAAAG+AGG | - | chr3_2:63416103-63416122 | None:intergenic | 35.0% | |
| ! | AGCATAAGCATCTAAGATTC+CGG | - | chr3_2:63416207-63416226 | None:intergenic | 35.0% |
| CTTGCTAGTTGTTATACACA+AGG | + | chr3_2:63416452-63416471 | Msa0416510:intron | 35.0% | |
| AAATCAAATCACCATTCACC+AGG | - | chr3_2:63416549-63416568 | None:intergenic | 35.0% | |
| !! | TTTTCTATTTTCTCTGGAGG+TGG | + | chr3_2:63416808-63416827 | Msa0416510:intron | 35.0% |
| !! | TTTCTATTTTCTCTGGAGGT+GGG | + | chr3_2:63416809-63416828 | Msa0416510:intron | 35.0% |
| TTTAGCAAGAACTTTCAAGG+AGG | + | chr3_2:63416890-63416909 | Msa0416510:intron | 35.0% | |
| ATTGCATATAATAGAAGGGG+GGG | - | chr3_2:63416936-63416955 | None:intergenic | 35.0% | |
| AAGGTTCCATCTAAAAACCT+AGG | - | chr3_2:63417033-63417052 | None:intergenic | 35.0% | |
| !! | TAGGTTTTTAGATGGAACCT+TGG | + | chr3_2:63417032-63417051 | Msa0416510:intron | 35.0% |
| !! | TGTTAAAAGTGTTGATGCCA+TGG | + | chr3_2:63417056-63417075 | Msa0416510:CDS | 35.0% |
| AGATAGAGATTCTTCTGACA+TGG | - | chr3_2:63417139-63417158 | None:intergenic | 35.0% | |
| ATCTGTTAGCAATAAAGAGG+TGG | + | chr3_2:63417155-63417174 | Msa0416510:CDS | 35.0% | |
| CACTGCATTATCAATCTGAT+CGG | - | chr3_2:63417211-63417230 | None:intergenic | 35.0% | |
| GCTACTATATAAGAGGTCTT+CGG | - | chr3_2:63417337-63417356 | None:intergenic | 35.0% | |
| TATAGATGCAGCAACTTGAA+AGG | - | chr3_2:63417367-63417386 | None:intergenic | 35.0% | |
| TATAAACCGAGCAAAGTCAA+GGG | + | chr3_2:63417383-63417402 | Msa0416510:CDS | 35.0% | |
| GATTCAACAGTGAACATTTC+TGG | + | chr3_2:63417501-63417520 | Msa0416510:CDS | 35.0% | |
| TCTGCAACGAATCGTAATAT+TGG | + | chr3_2:63417624-63417643 | Msa0416510:CDS | 35.0% | |
| ! | GAGCTTTCTGTGTAATTTTC+TGG | - | chr3_2:63417750-63417769 | None:intergenic | 35.0% |
| CATCCACTAAATACTGTTGA+TGG | - | chr3_2:63417860-63417879 | None:intergenic | 35.0% | |
| CATCAACAGTATTTAGTGGA+TGG | + | chr3_2:63417858-63417877 | Msa0416510:CDS | 35.0% | |
| ATGGTAAATTAGTGGCAGTT+GGG | + | chr3_2:63417877-63417896 | Msa0416510:CDS | 35.0% | |
| TACTCTGCTCTTCAAGAAAT+TGG | + | chr3_2:63417981-63418000 | Msa0416510:CDS | 35.0% | |
| TGCTCTTCAAGAAATTGGTT+GGG | + | chr3_2:63417986-63418005 | Msa0416510:CDS | 35.0% | |
| ! | AGATAATAGTACTGGAGACT+AGG | - | chr3_2:63418035-63418054 | None:intergenic | 35.0% |
| AGTCTCCAGTACTATTATCT+TGG | + | chr3_2:63418035-63418054 | Msa0416510:CDS | 35.0% | |
| AGTAGCCAAGATAATAGTAC+TGG | - | chr3_2:63418043-63418062 | None:intergenic | 35.0% | |
| ! | TTAACTTACTGATAGCGAAG+AGG | - | chr3_2:63418128-63418147 | None:intergenic | 35.0% |
| ACTATATCAGCATGCTGTAT+AGG | + | chr3_2:63418336-63418355 | Msa0416510:intron | 35.0% | |
| GTTTCACATAATATAGGAGG+TGG | - | chr3_2:63418404-63418423 | None:intergenic | 35.0% | |
| AACATCAATGAATGATCTCC+AGG | + | chr3_2:63418433-63418452 | Msa0416510:intron | 35.0% | |
| TCATCTTCATCTTCATGCAT+TGG | - | chr3_2:63418630-63418649 | None:intergenic | 35.0% | |
| TCAAATGGTGAACCAGAAAA+TGG | + | chr3_2:63418720-63418739 | Msa0416510:CDS | 35.0% | |
| ! | GATTTCAGCAAAGTTTTGCT+AGG | + | chr3_2:63418744-63418763 | Msa0416510:CDS | 35.0% |
| ! | CAAAGTTTTGCTAGGGATAA+AGG | + | chr3_2:63418752-63418771 | Msa0416510:CDS | 35.0% |
| ATCATACCTTGTATCTCACA+CGG | - | chr3_2:63418782-63418801 | None:intergenic | 35.0% | |
| GTGAATTTCAGACATGTTGT+CGG | + | chr3_2:63418931-63418950 | Msa0416510:intron | 35.0% | |
| TAGTGATAGAGGAAAGAGTT+TGG | + | chr3_2:63419071-63419090 | Msa0416510:intron | 35.0% | |
| AGTTTGGATCCATGTGTTTA+AGG | + | chr3_2:63419087-63419106 | Msa0416510:intron | 35.0% | |
| ACTAGTCATGTTGCATGTTT+AGG | + | chr3_2:63419133-63419152 | Msa0416510:intron | 35.0% | |
| ATGGGACAAATAAATCATGC+AGG | - | chr3_2:63419188-63419207 | None:intergenic | 35.0% | |
| AAGGATCTGCAAAGTGTATT+TGG | + | chr3_2:63419263-63419282 | Msa0416510:intron | 35.0% | |
| ! | ATACAGGATCTTATTTGCTG+GGG | - | chr3_2:63419430-63419449 | None:intergenic | 35.0% |
| ! | GATACAGGATCTTATTTGCT+GGG | - | chr3_2:63419431-63419450 | None:intergenic | 35.0% |
| GGGATTGTTCGATCTTTGAT+TGG | - | chr3_2:63413873-63413892 | None:intergenic | 40.0% | |
| GAACCATGAGAGATGCTATT+GGG | - | chr3_2:63414042-63414061 | None:intergenic | 40.0% | |
| TGAACCATGAGAGATGCTAT+TGG | - | chr3_2:63414043-63414062 | None:intergenic | 40.0% | |
| ! | TTTTCTTGTTACAGGCATGC+TGG | + | chr3_2:63414325-63414344 | Msa0416510:intron | 40.0% |
| ATGTCAAACAACACCAACCT+TGG | - | chr3_2:63414376-63414395 | None:intergenic | 40.0% | |
| !! | TCATCACGTTGGTGTCAAAA+AGG | - | chr3_2:63414585-63414604 | None:intergenic | 40.0% |
| TTCAGACCCCTCTTCTTTAT+AGG | + | chr3_2:63414620-63414639 | Msa0416510:intron | 40.0% | |
| ! | TCCGAAAGCATAAGCACATT+TGG | - | chr3_2:63414664-63414683 | None:intergenic | 40.0% |
| ! | CGTAGCCTATAATGGTTTGT+TGG | - | chr3_2:63414695-63414714 | None:intergenic | 40.0% |
| ATGCTTCACGGATATACTCT+CGG | + | chr3_2:63414829-63414848 | Msa0416510:intron | 40.0% | |
| CTATTCTCCATCCCTATGTT+AGG | - | chr3_2:63415103-63415122 | None:intergenic | 40.0% | |
| GGTGTGAAAGTAAAACGATC+CGG | - | chr3_2:63415333-63415352 | None:intergenic | 40.0% | |
| ! | GTAAAGATTCTTTGAAGGGG+GGG | - | chr3_2:63415481-63415500 | None:intergenic | 40.0% |
| TTTAAAGAGGTCGGGAGAAA+TGG | - | chr3_2:63415510-63415529 | None:intergenic | 40.0% | |
| CCGACCTCTTTAAATAGAGA+AGG | + | chr3_2:63415516-63415535 | Msa0416510:intron | 40.0% | |
| AAAGGGGACTCATTATTCAC+TGG | + | chr3_2:63415553-63415572 | Msa0416510:intron | 40.0% | |
| !! | CAACAGGGTTTTTGTTTCAG+TGG | - | chr3_2:63415583-63415602 | None:intergenic | 40.0% |
| ! | TCTGTTAGCTCTTCTTGATC+GGG | + | chr3_2:63415734-63415753 | Msa0416510:intron | 40.0% |
| !!! | CAACAGGTTTTTTCCATCTC+CGG | - | chr3_2:63415792-63415811 | None:intergenic | 40.0% |
| !! | TCAAGCGGATTGTATAGGAA+GGG | - | chr3_2:63415815-63415834 | None:intergenic | 40.0% |
| !! | TTCAAGCGGATTGTATAGGA+AGG | - | chr3_2:63415816-63415835 | None:intergenic | 40.0% |
| !! | TGCTTTCAAGCGGATTGTAT+AGG | - | chr3_2:63415820-63415839 | None:intergenic | 40.0% |
| CAAAGTCACTTGCTTTCAAG+CGG | - | chr3_2:63415830-63415849 | None:intergenic | 40.0% | |
| AAGTGACTTTGTTCCCTCTA+AGG | + | chr3_2:63415839-63415858 | Msa0416510:CDS | 40.0% | |
| ACACGAAGTTGTTCCTTAGA+GGG | - | chr3_2:63415855-63415874 | None:intergenic | 40.0% | |
| TACACGAAGTTGTTCCTTAG+AGG | - | chr3_2:63415856-63415875 | None:intergenic | 40.0% | |
| GTGTATCTAGACGAATGCAA+AGG | + | chr3_2:63415871-63415890 | Msa0416510:CDS | 40.0% | |
| ATCAGAGAGAAAGAGGATGA+TGG | - | chr3_2:63416096-63416115 | None:intergenic | 40.0% | |
| ! | GCATAAGCATCTAAGATTCC+GGG | - | chr3_2:63416206-63416225 | None:intergenic | 40.0% |
| ! | GTATGTGAGTTGAGACTTGA+TGG | + | chr3_2:63416620-63416639 | Msa0416510:intron | 40.0% |
| ATGAACCTTAAGACTTTCCC+TGG | - | chr3_2:63416650-63416669 | None:intergenic | 40.0% | |
| AAGTCCTCACATAGTCACAT+GGG | + | chr3_2:63416675-63416694 | Msa0416510:intron | 40.0% | |
| AAAGGAGAAGCAACACCTTA+TGG | - | chr3_2:63416863-63416882 | None:intergenic | 40.0% | |
| TTGCATATAATAGAAGGGGG+GGG | - | chr3_2:63416935-63416954 | None:intergenic | 40.0% | |
| !! | TTTGTTCCACTTTTCACCGA+TGG | + | chr3_2:63416998-63417017 | Msa0416510:intron | 40.0% |
| AAAGAACCATCGGTGAAAAG+TGG | - | chr3_2:63417007-63417026 | None:intergenic | 40.0% | |
| ACCTAGGAAGAAAGAACCAT+CGG | - | chr3_2:63417017-63417036 | None:intergenic | 40.0% | |
| !! | TAAAAGTGTTGATGCCATGG+AGG | + | chr3_2:63417059-63417078 | Msa0416510:CDS | 40.0% |
| ! | TGAAGTATTTGGTTCCTCCA+TGG | - | chr3_2:63417076-63417095 | None:intergenic | 40.0% |
| !! | ATGATGGGTTGTTATGGACA+AGG | - | chr3_2:63417113-63417132 | None:intergenic | 40.0% |
| ACCAAAAGCTTCAGTCAGAA+TGG | + | chr3_2:63417275-63417294 | Msa0416510:CDS | 40.0% | |
| ! | ACCATTCTGACTGAAGCTTT+TGG | - | chr3_2:63417279-63417298 | None:intergenic | 40.0% |
| TTCAGTCAGAATGGTTTCAC+AGG | + | chr3_2:63417284-63417303 | Msa0416510:CDS | 40.0% | |
| TCAGTCAGAATGGTTTCACA+GGG | + | chr3_2:63417285-63417304 | Msa0416510:CDS | 40.0% | |
| CTATAAACCGAGCAAAGTCA+AGG | + | chr3_2:63417382-63417401 | Msa0416510:CDS | 40.0% | |
| ACCATCAAGAGATAGTGAGA+AGG | + | chr3_2:63417428-63417447 | Msa0416510:CDS | 40.0% | |
| TCCTTCTCACTATCTCTTGA+TGG | - | chr3_2:63417432-63417451 | None:intergenic | 40.0% | |
| AGAGATAGTGAGAAGGAGAA+TGG | + | chr3_2:63417435-63417454 | Msa0416510:CDS | 40.0% | |
| !! | ACATTTCTGGTCTGTCTATC+AGG | + | chr3_2:63417514-63417533 | Msa0416510:CDS | 40.0% |
| !! | CATTTCTGGTCTGTCTATCA+GGG | + | chr3_2:63417515-63417534 | Msa0416510:CDS | 40.0% |
| GCAACGAATCGTAATATTGG+AGG | + | chr3_2:63417627-63417646 | Msa0416510:CDS | 40.0% | |
| ! | AAGCTCATATCGCAGGTTTT+TGG | + | chr3_2:63417764-63417783 | Msa0416510:CDS | 40.0% |
| GATGGTAAATTAGTGGCAGT+TGG | + | chr3_2:63417876-63417895 | Msa0416510:CDS | 40.0% | |
| TGGTAAATTAGTGGCAGTTG+GGG | + | chr3_2:63417878-63417897 | Msa0416510:CDS | 40.0% | |
| AGTGATAGAAAGGCAAAGTC+TGG | - | chr3_2:63417954-63417973 | None:intergenic | 40.0% | |
| GACTTTGCCTTTCTATCACT+AGG | + | chr3_2:63417954-63417973 | Msa0416510:CDS | 40.0% | |
| GTACTTGCCTAGTGATAGAA+AGG | - | chr3_2:63417964-63417983 | None:intergenic | 40.0% | |
| CTGCTCTTCAAGAAATTGGT+TGG | + | chr3_2:63417985-63418004 | Msa0416510:CDS | 40.0% | |
| AAACTACAAGCATGGTGAAG+TGG | - | chr3_2:63418177-63418196 | None:intergenic | 40.0% | |
| ATCAATGAATGATCTCCAGG+TGG | + | chr3_2:63418436-63418455 | Msa0416510:intron | 40.0% | |
| TCAATGAATGATCTCCAGGT+GGG | + | chr3_2:63418437-63418456 | Msa0416510:intron | 40.0% | |
| AATGTCAAATGAAACCCACC+TGG | - | chr3_2:63418454-63418473 | None:intergenic | 40.0% | |
| GGGTTTCATTTGACATTGCA+AGG | + | chr3_2:63418457-63418476 | Msa0416510:CDS | 40.0% | |
| TAACGCTTTCTGTCAAGCAA+AGG | - | chr3_2:63418483-63418502 | None:intergenic | 40.0% | |
| ATCTTCAGCAACTTGAAGTG+GGG | - | chr3_2:63418550-63418569 | None:intergenic | 40.0% | |
| GATCTTCAGCAACTTGAAGT+GGG | - | chr3_2:63418551-63418570 | None:intergenic | 40.0% | |
| TGATCTTCAGCAACTTGAAG+TGG | - | chr3_2:63418552-63418571 | None:intergenic | 40.0% | |
| TCAAGACACTATGTTAAGCC+AGG | + | chr3_2:63418569-63418588 | Msa0416510:CDS | 40.0% | |
| !! | TTGCTGAAATCGCCATTTTC+TGG | - | chr3_2:63418735-63418754 | None:intergenic | 40.0% |
| TCATACCTTGTATCTCACAC+GGG | - | chr3_2:63418781-63418800 | None:intergenic | 40.0% | |
| CTTAAAGCACAGGAAGTAAC+TGG | - | chr3_2:63418827-63418846 | None:intergenic | 40.0% | |
| !! | AACATTTTCTAAGGATGGCC+AGG | - | chr3_2:63418852-63418871 | None:intergenic | 40.0% |
| !! | GTAATATCTTTTCGGGAGAC+GGG | - | chr3_2:63418983-63419002 | None:intergenic | 40.0% |
| !! | GGTAATATCTTTTCGGGAGA+CGG | - | chr3_2:63418984-63419003 | None:intergenic | 40.0% |
| AAAATATCGGTAAGTAGGGG+AGG | - | chr3_2:63419027-63419046 | None:intergenic | 40.0% | |
| TTATTTGGAGGTAACCGGAT+TGG | + | chr3_2:63419045-63419064 | Msa0416510:intron | 40.0% | |
| TATTTGGAGGTAACCGGATT+GGG | + | chr3_2:63419046-63419065 | Msa0416510:intron | 40.0% | |
| ACAACAAGTCAGACCAGAAT+GGG | - | chr3_2:63419206-63419225 | None:intergenic | 40.0% | |
| TCCTTCAGATATGAATAGCG+CGG | - | chr3_2:63419248-63419267 | None:intergenic | 40.0% | |
| AGTCACAGTTGCAGAAATAC+AGG | + | chr3_2:63419309-63419328 | Msa0416510:CDS | 40.0% | |
| ACAGTTGCAGAAATACAGGA+GGG | + | chr3_2:63419313-63419332 | Msa0416510:CDS | 40.0% | |
| ! | GGATACAGGATCTTATTTGC+TGG | - | chr3_2:63419432-63419451 | None:intergenic | 40.0% |
| TTTGATCCCCATTTGTCTCT+AGG | + | chr3_2:63419468-63419487 | Msa0416510:three_prime_UTR | 40.0% | |
| TGCCATTCCTAGAGACAAAT+GGG | - | chr3_2:63419478-63419497 | None:intergenic | 40.0% | |
| ATGCCATTCCTAGAGACAAA+TGG | - | chr3_2:63419479-63419498 | None:intergenic | 40.0% | |
| CCATATTCAGCAACTAATGC+TGG | - | chr3_2:63419631-63419650 | None:intergenic | 40.0% | |
| CCAGCATTAGTTGCTGAATA+TGG | + | chr3_2:63419628-63419647 | Msa0416510:three_prime_UTR | 40.0% | |
| ! | TCTTAGTTGAAGCGTCAAGT+TGG | + | chr3_2:63419673-63419692 | Msa0416510:three_prime_UTR | 40.0% |
| GAAGAATGTCGAGTACGAAG+AGG | + | chr3_2:63413923-63413942 | Msa0416510:exon | 45.0% | |
| TAGCAGTAGCAAAACCCCAA+AGG | + | chr3_2:63413954-63413973 | Msa0416510:CDS | 45.0% | |
| AGCAACAACGCTTTCCTTTG+GGG | - | chr3_2:63413971-63413990 | None:intergenic | 45.0% | |
| CAGCAACAACGCTTTCCTTT+GGG | - | chr3_2:63413972-63413991 | None:intergenic | 45.0% | |
| TCAGCAACAACGCTTTCCTT+TGG | - | chr3_2:63413973-63413992 | None:intergenic | 45.0% | |
| !! | GAAAGCGTTGTTGCTGATTG+CGG | + | chr3_2:63413976-63413995 | Msa0416510:CDS | 45.0% |
| ! | TGGGTTGTTGTTGTAGTTGG+TGG | + | chr3_2:63414175-63414194 | Msa0416510:intron | 45.0% |
| ! | CATGCTGGCATATAGCCTTA+CGG | + | chr3_2:63414340-63414359 | Msa0416510:CDS | 45.0% |
| ! | CTTGGTAGTCATACACCGTA+AGG | - | chr3_2:63414358-63414377 | None:intergenic | 45.0% |
| CTTACGGTGTATGACTACCA+AGG | + | chr3_2:63414356-63414375 | Msa0416510:CDS | 45.0% | |
| GATGAGCAAGATCATCACGT+TGG | - | chr3_2:63414596-63414615 | None:intergenic | 45.0% | |
| CCATACTCTGCGAATACTCT+CGG | + | chr3_2:63414736-63414755 | Msa0416510:intron | 45.0% | |
| !! | ATGGATGATGGTAATGGGAG+AGG | + | chr3_2:63415011-63415030 | Msa0416510:intron | 45.0% |
| ! | AATGGGAGAGGAGACTCTTT+TGG | + | chr3_2:63415023-63415042 | Msa0416510:intron | 45.0% |
| ATCCGGGCTTCATAGACTAT+AGG | + | chr3_2:63415363-63415382 | Msa0416510:intron | 45.0% | |
| TCATAGACTATAGGCCGAGT+AGG | + | chr3_2:63415372-63415391 | Msa0416510:intron | 45.0% | |
| ! | CTGTTAGCTCTTCTTGATCG+GGG | + | chr3_2:63415735-63415754 | Msa0416510:intron | 45.0% |
| GATTGTATAGGAAGGGCAAC+AGG | - | chr3_2:63415808-63415827 | None:intergenic | 45.0% | |
| !! | ATGTGTCACTTCCTGGTGAA+TGG | + | chr3_2:63416535-63416554 | Msa0416510:intron | 45.0% |
| ! | TTGAGACTTGATGGCTAACC+AGG | + | chr3_2:63416629-63416648 | Msa0416510:intron | 45.0% |
| ! | TGAGACTTGATGGCTAACCA+GGG | + | chr3_2:63416630-63416649 | Msa0416510:intron | 45.0% |
| GCTAACCAGGGAAAGTCTTA+AGG | + | chr3_2:63416642-63416661 | Msa0416510:intron | 45.0% | |
| GAAGTCCTCACATAGTCACA+TGG | + | chr3_2:63416674-63416693 | Msa0416510:intron | 45.0% | |
| ! | GACTCGAACTCACATCCTTT+TGG | + | chr3_2:63416704-63416723 | Msa0416510:intron | 45.0% |
| ! | CGAGTTGAATACCTACCAAC+TGG | + | chr3_2:63416731-63416750 | Msa0416510:intron | 45.0% |
| CGAAAATTGGTCCAGTTGGT+AGG | - | chr3_2:63416745-63416764 | None:intergenic | 45.0% | |
| CCTACGAAAATTGGTCCAGT+TGG | - | chr3_2:63416749-63416768 | None:intergenic | 45.0% | |
| ! | CCAACTGGACCAATTTTCGT+AGG | + | chr3_2:63416746-63416765 | Msa0416510:intron | 45.0% |
| GTGGCAAAGCCTACGAAAAT+TGG | - | chr3_2:63416758-63416777 | None:intergenic | 45.0% | |
| ACCGATGGTTCTTTCTTCCT+AGG | + | chr3_2:63417013-63417032 | Msa0416510:intron | 45.0% | |
| !! | TGGAGCATGATGGGTTGTTA+TGG | - | chr3_2:63417119-63417138 | None:intergenic | 45.0% |
| CTTCTGACATGGAGCATGAT+GGG | - | chr3_2:63417128-63417147 | None:intergenic | 45.0% | |
| TCTTCTGACATGGAGCATGA+TGG | - | chr3_2:63417129-63417148 | None:intergenic | 45.0% | |
| GTGCACATGTTCACTGAGAA+CGG | + | chr3_2:63417228-63417247 | Msa0416510:CDS | 45.0% | |
| TGCACATGTTCACTGAGAAC+GGG | + | chr3_2:63417229-63417248 | Msa0416510:CDS | 45.0% | |
| CAGTCAGAATGGTTTCACAG+GGG | + | chr3_2:63417286-63417305 | Msa0416510:CDS | 45.0% | |
| GGTTTCACAGGGGAAAAAGA+AGG | + | chr3_2:63417296-63417315 | Msa0416510:CDS | 45.0% | |
| CGATTCGTTGCAGACTTCTT+TGG | - | chr3_2:63417618-63417637 | None:intergenic | 45.0% | |
| ACACAGAAAGCTCATATCGC+AGG | + | chr3_2:63417757-63417776 | Msa0416510:CDS | 45.0% | |
| GATAACACAGTTCCTCCTTG+TGG | + | chr3_2:63417822-63417841 | Msa0416510:CDS | 45.0% | |
| ! | ACAGTTCCTCCTTGTGGTTT+TGG | + | chr3_2:63417828-63417847 | Msa0416510:CDS | 45.0% |
| AAAGAGCCAAAACCACAAGG+AGG | - | chr3_2:63417837-63417856 | None:intergenic | 45.0% | |
| TGGAAAGAGCCAAAACCACA+AGG | - | chr3_2:63417840-63417859 | None:intergenic | 45.0% | |
| TGGTTGGGTGAAAGATAACC+AGG | + | chr3_2:63418001-63418020 | Msa0416510:CDS | 45.0% | |
| GTACTGGAGACTAGGACAAT+AGG | - | chr3_2:63418027-63418046 | None:intergenic | 45.0% | |
| !! | GAGGACATAGTAGCTCTGAA+GGG | - | chr3_2:63418109-63418128 | None:intergenic | 45.0% |
| !! | AGAGGACATAGTAGCTCTGA+AGG | - | chr3_2:63418110-63418129 | None:intergenic | 45.0% |
| !! | TTAAGCCAGGTTGATGACAG+TGG | + | chr3_2:63418582-63418601 | Msa0416510:CDS | 45.0% |
| ATTTGGAGGTAACCGGATTG+GGG | + | chr3_2:63419047-63419066 | Msa0416510:intron | 45.0% | |
| CTCTATCACTATCCCCAATC+CGG | - | chr3_2:63419062-63419081 | None:intergenic | 45.0% | |
| GACAACAAGTCAGACCAGAA+TGG | - | chr3_2:63419207-63419226 | None:intergenic | 45.0% | |
| ACCGCGCTATTCATATCTGA+AGG | + | chr3_2:63419244-63419263 | Msa0416510:intron | 45.0% | |
| CACAGTTGCAGAAATACAGG+AGG | + | chr3_2:63419312-63419331 | Msa0416510:CDS | 45.0% | |
| CAGAAATACAGGAGGGTTGT+CGG | + | chr3_2:63419320-63419339 | Msa0416510:CDS | 45.0% | |
| ! | TCCCCATTTGTCTCTAGGAA+TGG | + | chr3_2:63419473-63419492 | Msa0416510:three_prime_UTR | 45.0% |
| GCCATTCCTAGAGACAAATG+GGG | - | chr3_2:63419477-63419496 | None:intergenic | 45.0% | |
| !!! | TTTTATTTTATAACAATTAT+TGG | + | chr3_2:63418251-63418270 | Msa0416510:intron | 5.0% |
| TGAGAGATGCTATTGGGACG+AGG | - | chr3_2:63414036-63414055 | None:intergenic | 50.0% | |
| CGTCCCAATAGCATCTCTCA+TGG | + | chr3_2:63414036-63414055 | Msa0416510:CDS | 50.0% | |
| CGGTGTATGACTACCAAGGT+TGG | + | chr3_2:63414360-63414379 | Msa0416510:intron | 50.0% | |
| CCATTATAGGCTACGAAGCC+CGG | + | chr3_2:63414700-63414719 | Msa0416510:intron | 50.0% | |
| TATGGATGTCCGACACATCC+GGG | - | chr3_2:63414721-63414740 | None:intergenic | 50.0% | |
| GTATGGATGTCCGACACATC+CGG | - | chr3_2:63414722-63414741 | None:intergenic | 50.0% | |
| !! | CCGAGAGTATTCGCAGAGTA+TGG | - | chr3_2:63414739-63414758 | None:intergenic | 50.0% |
| TCACACCCACACCATGTATC+CGG | + | chr3_2:63415346-63415365 | Msa0416510:intron | 50.0% | |
| GTCTATGAAGCCCGGATACA+TGG | - | chr3_2:63415360-63415379 | None:intergenic | 50.0% | |
| GGCCTATAGTCTATGAAGCC+CGG | - | chr3_2:63415368-63415387 | None:intergenic | 50.0% | |
| AGACTATAGGCCGAGTAGGA+TGG | + | chr3_2:63415376-63415395 | Msa0416510:intron | 50.0% | |
| CGGTCGTTAACCATCCTACT+CGG | - | chr3_2:63415389-63415408 | None:intergenic | 50.0% | |
| ! | TCTTTGAAGGGGGGGAAGTT+AGG | - | chr3_2:63415473-63415492 | None:intergenic | 50.0% |
| GGAAGTGACACATGTCCCAA+AGG | - | chr3_2:63416528-63416547 | None:intergenic | 50.0% | |
| !! | TTGGGACATGTGTCACTTCC+TGG | + | chr3_2:63416528-63416547 | Msa0416510:intron | 50.0% |
| ACTGCCCATGTGACTATGTG+AGG | - | chr3_2:63416682-63416701 | None:intergenic | 50.0% | |
| GCACATGTTCACTGAGAACG+GGG | + | chr3_2:63417230-63417249 | Msa0416510:CDS | 50.0% | |
| GAGAACGGGGAATTTCCATC+TGG | + | chr3_2:63417243-63417262 | Msa0416510:CDS | 50.0% | |
| TAAGAGGTCTTCGGACCCAT+TGG | - | chr3_2:63417328-63417347 | None:intergenic | 50.0% | |
| CCTTGTCCCTTGACTTTGCT+CGG | - | chr3_2:63417392-63417411 | None:intergenic | 50.0% | |
| GCAAAGTCAAGGGACAAGGA+TGG | + | chr3_2:63417393-63417412 | Msa0416510:CDS | 50.0% | |
| CTGTCTATCAGGGCTTGCAA+TGG | + | chr3_2:63417525-63417544 | Msa0416510:CDS | 50.0% | |
| CTTGACCACTGTCATCAACC+TGG | - | chr3_2:63418590-63418609 | None:intergenic | 50.0% | |
| ! | CTTCCTGTGCTTTAAGCACC+TGG | + | chr3_2:63418831-63418850 | Msa0416510:intron | 50.0% |
| ! | CGGATTGGGGATAGTGATAG+AGG | + | chr3_2:63419060-63419079 | Msa0416510:intron | 50.0% |
| TCGTGAGCAGCAGAGATACT+TGG | + | chr3_2:63419286-63419305 | Msa0416510:CDS | 50.0% | |
| TCCAGTGTTATCCGAGCGAA+TGG | + | chr3_2:63419343-63419362 | Msa0416510:CDS | 50.0% | |
| ACCATTCGCTCGGATAACAC+TGG | - | chr3_2:63419347-63419366 | None:intergenic | 50.0% | |
| GAGAGAGTAGACCATTCGCT+CGG | - | chr3_2:63419357-63419376 | None:intergenic | 50.0% | |
| GAGCGAATGGTCTACTCTCT+CGG | + | chr3_2:63419356-63419375 | Msa0416510:CDS | 50.0% | |
| AAGATCCTGTATCCAGCAGC+TGG | + | chr3_2:63419438-63419457 | Msa0416510:three_prime_UTR | 50.0% | |
| TCAAATTCAGCTCCAGCTGC+TGG | - | chr3_2:63419453-63419472 | None:intergenic | 50.0% | |
| !! | GGAAAGCGTCGAAGCTCTTG+TGG | + | chr3_2:63413997-63414016 | Msa0416510:CDS | 55.0% |
| CCGGGCTTCGTAGCCTATAA+TGG | - | chr3_2:63414703-63414722 | None:intergenic | 55.0% | |
| CACACCCACACCATGTATCC+GGG | + | chr3_2:63415347-63415366 | Msa0416510:intron | 55.0% | |
| GAAGCCCGGATACATGGTGT+GGG | - | chr3_2:63415354-63415373 | None:intergenic | 55.0% | |
| TGAAGCCCGGATACATGGTG+TGG | - | chr3_2:63415355-63415374 | None:intergenic | 55.0% | |
| GGATGGTTAACGACCGAGTC+AGG | + | chr3_2:63415393-63415412 | Msa0416510:intron | 55.0% | |
| TAGCTCTTCTTGATCGGGGC+TGG | + | chr3_2:63415739-63415758 | Msa0416510:intron | 55.0% | |
| CCGAGCAAAGTCAAGGGACA+AGG | + | chr3_2:63417389-63417408 | Msa0416510:CDS | 55.0% | |
| GGAGACTAGGACAATAGGCC+TGG | - | chr3_2:63418022-63418041 | None:intergenic | 55.0% | |
| GGGATCCCGTGTGAGATACA+AGG | + | chr3_2:63418773-63418792 | Msa0416510:CDS | 55.0% | |
| TGGCCAGGTGCTTAAAGCAC+AGG | - | chr3_2:63418837-63418856 | None:intergenic | 55.0% | |
| ! | CGGGAGACGGGAGTATGAAA+AGG | - | chr3_2:63418971-63418990 | None:intergenic | 55.0% |
| GCTACGAAGCCCGGATGTGT+CGG | + | chr3_2:63414709-63414728 | Msa0416510:intron | 60.0% | |
| GATCGGGGCTGGAGAAGATC+TGG | + | chr3_2:63415750-63415769 | Msa0416510:CDS | 60.0% | |
| CAGCTCCAGCTGCTGGATAC+AGG | - | chr3_2:63419446-63419465 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 63413684 | 63419738 | 63413684 | ID=Msa0416510;Name=Msa0416510 |
| chr3_2 | mRNA | 63413684 | 63419738 | 63413684 | ID=Msa0416510-mRNA-1;Parent=Msa0416510;Name=Msa0416510-mRNA-1;_AED=0.01;_eAED=0.01;_QI=244|1|1|1|1|1|6|356|626 |
| chr3_2 | exon | 63413684 | 63414057 | 63413684 | ID=Msa0416510-mRNA-1:exon:13776;Parent=Msa0416510-mRNA-1 |
| chr3_2 | exon | 63414339 | 63414377 | 63414339 | ID=Msa0416510-mRNA-1:exon:13777;Parent=Msa0416510-mRNA-1 |
| chr3_2 | exon | 63415742 | 63415892 | 63415742 | ID=Msa0416510-mRNA-1:exon:13778;Parent=Msa0416510-mRNA-1 |
| chr3_2 | exon | 63417035 | 63418138 | 63417035 | ID=Msa0416510-mRNA-1:exon:13779;Parent=Msa0416510-mRNA-1 |
| chr3_2 | exon | 63418455 | 63418794 | 63418455 | ID=Msa0416510-mRNA-1:exon:13780;Parent=Msa0416510-mRNA-1 |
| chr3_2 | exon | 63419266 | 63419738 | 63419266 | ID=Msa0416510-mRNA-1:exon:13781;Parent=Msa0416510-mRNA-1 |
| chr3_2 | five_prime_UTR | 63413684 | 63413927 | 63413684 | ID=Msa0416510-mRNA-1:five_prime_utr;Parent=Msa0416510-mRNA-1 |
| chr3_2 | CDS | 63413928 | 63414057 | 63413928 | ID=Msa0416510-mRNA-1:cds;Parent=Msa0416510-mRNA-1 |
| chr3_2 | CDS | 63414339 | 63414377 | 63414339 | ID=Msa0416510-mRNA-1:cds;Parent=Msa0416510-mRNA-1 |
| chr3_2 | CDS | 63415742 | 63415892 | 63415742 | ID=Msa0416510-mRNA-1:cds;Parent=Msa0416510-mRNA-1 |
| chr3_2 | CDS | 63417035 | 63418138 | 63417035 | ID=Msa0416510-mRNA-1:cds;Parent=Msa0416510-mRNA-1 |
| chr3_2 | CDS | 63418455 | 63418794 | 63418455 | ID=Msa0416510-mRNA-1:cds;Parent=Msa0416510-mRNA-1 |
| chr3_2 | CDS | 63419266 | 63419382 | 63419266 | ID=Msa0416510-mRNA-1:cds;Parent=Msa0416510-mRNA-1 |
| chr3_2 | three_prime_UTR | 63419383 | 63419738 | 63419383 | ID=Msa0416510-mRNA-1:three_prime_utr;Parent=Msa0416510-mRNA-1 |
| Gene Sequence |
| Protein sequence |
