Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1159160 | XP_003625137.2 | 46.610 | 236 | 121 | 2 | 84 | 319 | 549 | 779 | 6.67e-50 | 196 |
| Msa1159160 | XP_003625137.2 | 99.226 | 517 | 4 | 0 | 1 | 517 | 1370 | 1886 | 0.0 | 1066 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1159160 | sp|Q84M24|AB1A_ARATH | 70.577 | 520 | 150 | 2 | 1 | 517 | 1363 | 1882 | 0.0 | 756 |
| Msa1159160 | sp|Q84M24|AB1A_ARATH | 43.644 | 236 | 128 | 2 | 84 | 319 | 544 | 774 | 2.37e-49 | 186 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1159160 | G7KTH7 | 46.610 | 236 | 121 | 2 | 84 | 319 | 549 | 779 | 3.19e-50 | 196 |
| Msa1159160 | G7KTH7 | 99.226 | 517 | 4 | 0 | 1 | 517 | 1370 | 1886 | 0.0 | 1066 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0016640 | Msa1159160 | 0.815118 | 1.088948e-51 | -8.615850e-47 |
| Msa0025070 | Msa1159160 | -0.806336 | 8.643034e-50 | -8.615850e-47 |
| Msa0025290 | Msa1159160 | -0.831928 | 1.263919e-55 | -8.615850e-47 |
| Msa0035050 | Msa1159160 | -0.811629 | 6.361774e-51 | -8.615850e-47 |
| Msa0037080 | Msa1159160 | 0.805744 | 1.151281e-49 | -8.615850e-47 |
| Msa0037780 | Msa1159160 | -0.817624 | 2.993684e-52 | -8.615850e-47 |
| Msa0042950 | Msa1159160 | -0.850526 | 1.603708e-60 | -8.615850e-47 |
| Msa0046020 | Msa1159160 | -0.800448 | 1.434554e-48 | -8.615850e-47 |
| Msa0051960 | Msa1159160 | 0.814975 | 1.171236e-51 | -8.615850e-47 |
| Msa0057770 | Msa1159160 | -0.807550 | 4.785587e-50 | -8.615850e-47 |
| Msa0069150 | Msa1159160 | -0.805297 | 1.429021e-49 | -8.615850e-47 |
| Msa0072600 | Msa1159160 | -0.840868 | 6.709502e-58 | -8.615850e-47 |
| Msa0084300 | Msa1159160 | 0.810190 | 1.303972e-50 | -8.615850e-47 |
| Msa0092480 | Msa1159160 | -0.809821 | 1.565743e-50 | -8.615850e-47 |
| Msa0093950 | Msa1159160 | -0.809923 | 1.488569e-50 | -8.615850e-47 |
| Msa0095940 | Msa1159160 | 0.814434 | 1.543741e-51 | -8.615850e-47 |
| Msa0101960 | Msa1159160 | 0.818218 | 2.198917e-52 | -8.615850e-47 |
| Msa0112880 | Msa1159160 | -0.810636 | 1.044742e-50 | -8.615850e-47 |
| Msa0603310 | Msa1159160 | 0.811538 | 6.658427e-51 | -8.615850e-47 |
| Msa0603690 | Msa1159160 | -0.852217 | 5.337400e-61 | -8.615850e-47 |
| Msa0613420 | Msa1159160 | 0.815384 | 9.506124e-52 | -8.615850e-47 |
| Msa0626920 | Msa1159160 | 0.803166 | 3.968671e-49 | -8.615850e-47 |
| Msa0637930 | Msa1159160 | -0.806165 | 9.392911e-50 | -8.615850e-47 |
| Msa0638010 | Msa1159160 | -0.808126 | 3.610461e-50 | -8.615850e-47 |
| Msa0644340 | Msa1159160 | 0.826055 | 3.346045e-54 | -8.615850e-47 |
| Msa0652180 | Msa1159160 | 0.808076 | 3.698469e-50 | -8.615850e-47 |
| Msa0695250 | Msa1159160 | -0.801905 | 7.221324e-49 | -8.615850e-47 |
| Msa0696380 | Msa1159160 | 0.844553 | 7.041701e-59 | -8.615850e-47 |
| Msa0713570 | Msa1159160 | -0.815047 | 1.128925e-51 | -8.615850e-47 |
| Msa0744640 | Msa1159160 | 0.816138 | 6.454317e-52 | -8.615850e-47 |
| Msa0747230 | Msa1159160 | 0.842994 | 1.840335e-58 | -8.615850e-47 |
| Msa0754880 | Msa1159160 | -0.800539 | 1.374796e-48 | -8.615850e-47 |
| Msa0755550 | Msa1159160 | -0.816293 | 5.958633e-52 | -8.615850e-47 |
| Msa0757390 | Msa1159160 | -0.811549 | 6.623699e-51 | -8.615850e-47 |
| Msa0781330 | Msa1159160 | -0.803894 | 2.803845e-49 | -8.615850e-47 |
| Msa0793130 | Msa1159160 | -0.802847 | 4.619225e-49 | -8.615850e-47 |
| Msa0803640 | Msa1159160 | 0.818116 | 2.318935e-52 | -8.615850e-47 |
| Msa0833270 | Msa1159160 | 0.817022 | 4.090478e-52 | -8.615850e-47 |
| Msa0835050 | Msa1159160 | -0.812282 | 4.586123e-51 | -8.615850e-47 |
| Msa0841410 | Msa1159160 | -0.808059 | 3.730576e-50 | -8.615850e-47 |
| Msa0841730 | Msa1159160 | 0.816215 | 6.201956e-52 | -8.615850e-47 |
| Msa0125320 | Msa1159160 | 0.800129 | 1.665674e-48 | -8.615850e-47 |
| Msa0136870 | Msa1159160 | -0.840892 | 6.614279e-58 | -8.615850e-47 |
| Msa0138680 | Msa1159160 | -0.819326 | 1.231799e-52 | -8.615850e-47 |
| Msa0142340 | Msa1159160 | -0.820413 | 6.951038e-53 | -8.615850e-47 |
| Msa0172740 | Msa1159160 | 0.834786 | 2.450299e-56 | -8.615850e-47 |
| Msa0174100 | Msa1159160 | 0.860573 | 1.879459e-63 | -8.615850e-47 |
| Msa0178840 | Msa1159160 | -0.863093 | 3.182725e-64 | -8.615850e-47 |
| Msa0187590 | Msa1159160 | -0.831016 | 2.119420e-55 | -8.615850e-47 |
| Msa0195810 | Msa1159160 | -0.808989 | 2.360971e-50 | -8.615850e-47 |
| Msa0206450 | Msa1159160 | 0.838409 | 2.925386e-57 | -8.615850e-47 |
| Msa0213620 | Msa1159160 | -0.804210 | 2.409659e-49 | -8.615850e-47 |
| Msa0220400 | Msa1159160 | -0.800531 | 1.379681e-48 | -8.615850e-47 |
| Msa0226260 | Msa1159160 | 0.803087 | 4.119977e-49 | -8.615850e-47 |
| Msa0367540 | Msa1159160 | -0.837672 | 4.526140e-57 | -8.615850e-47 |
| Msa0372000 | Msa1159160 | 0.825744 | 3.966473e-54 | -8.615850e-47 |
| Msa0372570 | Msa1159160 | -0.849797 | 2.567135e-60 | -8.615850e-47 |
| Msa0374300 | Msa1159160 | -0.852053 | 5.941202e-61 | -8.615850e-47 |
| Msa0380270 | Msa1159160 | -0.809395 | 1.932757e-50 | -8.615850e-47 |
| Msa0383870 | Msa1159160 | -0.836815 | 7.502155e-57 | -8.615850e-47 |
| Msa0384780 | Msa1159160 | -0.800051 | 1.727623e-48 | -8.615850e-47 |
| Msa0397420 | Msa1159160 | -0.813813 | 2.116399e-51 | -8.615850e-47 |
| Msa0403470 | Msa1159160 | -0.803369 | 3.603431e-49 | -8.615850e-47 |
| Msa0415160 | Msa1159160 | -0.836936 | 6.987574e-57 | -8.615850e-47 |
| Msa0416510 | Msa1159160 | 0.802108 | 6.560521e-49 | -8.615850e-47 |
| Msa0419150 | Msa1159160 | -0.814588 | 1.427437e-51 | -8.615850e-47 |
| Msa0420300 | Msa1159160 | -0.818054 | 2.394654e-52 | -8.615850e-47 |
| Msa0425380 | Msa1159160 | 0.806925 | 6.490593e-50 | -8.615850e-47 |
| Msa0433790 | Msa1159160 | 0.810516 | 1.108823e-50 | -8.615850e-47 |
| Msa0434830 | Msa1159160 | -0.813932 | 1.992997e-51 | -8.615850e-47 |
| Msa0437270 | Msa1159160 | 0.820849 | 5.520150e-53 | -8.615850e-47 |
| Msa0460170 | Msa1159160 | -0.852756 | 3.747073e-61 | -8.615850e-47 |
| Msa0464980 | Msa1159160 | -0.810269 | 1.253556e-50 | -8.615850e-47 |
| Msa0469700 | Msa1159160 | -0.835335 | 1.781817e-56 | -8.615850e-47 |
| Msa0471850 | Msa1159160 | 0.806361 | 8.539073e-50 | -8.615850e-47 |
| Msa0480090 | Msa1159160 | -0.830430 | 2.949153e-55 | -8.615850e-47 |
| Msa1026970 | Msa1159160 | 0.809670 | 1.687395e-50 | -8.615850e-47 |
| Msa1028150 | Msa1159160 | 0.840431 | 8.734123e-58 | -8.615850e-47 |
| Msa1031460 | Msa1159160 | 0.801053 | 1.079499e-48 | -8.615850e-47 |
| Msa1041720 | Msa1159160 | 0.859285 | 4.598594e-63 | -8.615850e-47 |
| Msa1061550 | Msa1159160 | 0.831971 | 1.233512e-55 | -8.615850e-47 |
| Msa1066770 | Msa1159160 | 0.829063 | 6.348390e-55 | -8.615850e-47 |
| Msa1067000 | Msa1159160 | 0.810317 | 1.224108e-50 | -8.615850e-47 |
| Msa1067980 | Msa1159160 | -0.809390 | 1.937573e-50 | -8.615850e-47 |
| Msa1074210 | Msa1159160 | 0.912352 | 2.149496e-83 | -8.615850e-47 |
| Msa1079720 | Msa1159160 | -0.841098 | 5.837904e-58 | -8.615850e-47 |
| Msa1080610 | Msa1159160 | -0.872357 | 3.385480e-67 | -8.615850e-47 |
| Msa1080680 | Msa1159160 | -0.871658 | 5.780621e-67 | -8.615850e-47 |
| Msa1087520 | Msa1159160 | -0.805074 | 1.591132e-49 | -8.615850e-47 |
| Msa0259680 | Msa1159160 | 0.818691 | 1.717468e-52 | -8.615850e-47 |
| Msa0275250 | Msa1159160 | -0.812365 | 4.397849e-51 | -8.615850e-47 |
| Msa0315720 | Msa1159160 | -0.807442 | 5.045655e-50 | -8.615850e-47 |
| Msa0326630 | Msa1159160 | -0.833030 | 6.738953e-56 | -8.615850e-47 |
| Msa0341480 | Msa1159160 | 0.815113 | 1.091757e-51 | -8.615850e-47 |
| Msa0349470 | Msa1159160 | 0.814510 | 1.485376e-51 | -8.615850e-47 |
| Msa1111900 | Msa1159160 | 0.810571 | 1.078675e-50 | -8.615850e-47 |
| Msa1112190 | Msa1159160 | 0.847786 | 9.277682e-60 | -8.615850e-47 |
| Msa1114680 | Msa1159160 | 0.868766 | 5.116028e-66 | -8.615850e-47 |
| Msa1124530 | Msa1159160 | -0.832946 | 7.072559e-56 | -8.615850e-47 |
| Msa1126320 | Msa1159160 | -0.852880 | 3.451970e-61 | -8.615850e-47 |
| Msa1128610 | Msa1159160 | -0.802304 | 5.977340e-49 | -8.615850e-47 |
| Msa1129300 | Msa1159160 | -0.839424 | 1.597594e-57 | -8.615850e-47 |
| Msa1131880 | Msa1159160 | 0.830340 | 3.103258e-55 | -8.615850e-47 |
| Msa1133690 | Msa1159160 | 0.942643 | 4.997484e-102 | -8.615850e-47 |
| Msa1133760 | Msa1159160 | 0.805657 | 1.200892e-49 | -8.615850e-47 |
| Msa1140630 | Msa1159160 | 0.806107 | 9.660415e-50 | -8.615850e-47 |
| Msa1143810 | Msa1159160 | -0.822762 | 1.991867e-53 | -8.615850e-47 |
| Msa1146010 | Msa1159160 | 0.844232 | 8.589727e-59 | -8.615850e-47 |
| Msa1154310 | Msa1159160 | 0.804676 | 1.926961e-49 | -8.615850e-47 |
| Msa1159160 | Msa1164720 | -0.821365 | 4.197436e-53 | -8.615850e-47 |
| Msa1159160 | Msa1167150 | -0.874663 | 5.665480e-68 | -8.615850e-47 |
| Msa1159160 | Msa1168050 | -0.829043 | 6.420177e-55 | -8.615850e-47 |
| Msa1159160 | Msa1190100 | -0.826616 | 2.460762e-54 | -8.615850e-47 |
| Msa1159160 | Msa1208450 | -0.828782 | 7.424534e-55 | -8.615850e-47 |
| Msa1159160 | Msa1211510 | 0.814605 | 1.414666e-51 | -8.615850e-47 |
| Msa1159160 | Msa1218620 | 0.835675 | 1.461733e-56 | -8.615850e-47 |
| Msa1159160 | Msa1221270 | 0.806488 | 8.028797e-50 | -8.615850e-47 |
| Msa1159160 | Msa1229670 | -0.808296 | 3.321498e-50 | -8.615850e-47 |
| Msa1159160 | Msa1233810 | 0.820593 | 6.319931e-53 | -8.615850e-47 |
| Msa1159160 | Msa1251440 | -0.803821 | 2.903549e-49 | -8.615850e-47 |
| Msa1159160 | Msa1255480 | -0.833001 | 6.851683e-56 | -8.615850e-47 |
| Msa1159160 | Msa1258030 | -0.846186 | 2.543580e-59 | -8.615850e-47 |
| Msa1159160 | Msa1265300 | 0.802937 | 4.425570e-49 | -8.615850e-47 |
| Msa1159160 | Msa1289050 | 0.800991 | 1.111704e-48 | -8.615850e-47 |
| Msa1159160 | Msa1289090 | 0.812275 | 4.601433e-51 | -8.615850e-47 |
| Msa1159160 | Msa1298390 | -0.835198 | 1.929852e-56 | -8.615850e-47 |
| Msa1159160 | Msa1314310 | 0.803994 | 2.672332e-49 | -8.615850e-47 |
| Msa1159160 | Msa1325560 | -0.840403 | 8.881054e-58 | -8.615850e-47 |
| Msa1159160 | Msa1342250 | 0.802217 | 6.229796e-49 | -8.615850e-47 |
| Msa1159160 | Msa1345540 | -0.818903 | 1.537572e-52 | -8.615850e-47 |
| Msa1159160 | Msa1363820 | -0.830350 | 3.086044e-55 | -8.615850e-47 |
| Msa1159160 | Msa1364350 | -0.846026 | 2.811714e-59 | -8.615850e-47 |
| Msa1159160 | Msa1367560 | -0.814126 | 1.806015e-51 | -8.615850e-47 |
| Msa1159160 | Msa1373420 | -0.804341 | 2.263246e-49 | -8.615850e-47 |
| Msa1159160 | Msa1375970 | -0.833928 | 4.023034e-56 | -8.615850e-47 |
| Msa1159160 | Msa1376680 | -0.807234 | 5.584327e-50 | -8.615850e-47 |
| Msa1159160 | Msa1388010 | -0.801217 | 9.990843e-49 | -8.615850e-47 |
| Msa1159160 | Msa1397070 | 0.803120 | 4.055812e-49 | -8.615850e-47 |
| Msa1159160 | Msa1400200 | 0.811276 | 7.591924e-51 | -8.615850e-47 |
| Msa1159160 | Msa1411930 | -0.826578 | 2.512361e-54 | -8.615850e-47 |
| Msa1159160 | Msa1415510 | -0.800957 | 1.129557e-48 | -8.615850e-47 |
| Msa1159160 | Msa1416100 | 0.849418 | 3.275620e-60 | -8.615850e-47 |
| Msa1159160 | Msa1431510 | -0.800317 | 1.525427e-48 | -8.615850e-47 |
| Msa1159160 | Msa1440270 | 0.833224 | 6.028710e-56 | -8.615850e-47 |
| Msa1159160 | Msa1461690 | 0.825718 | 4.024011e-54 | -8.615850e-47 |
| Msa0484560 | Msa1159160 | -0.814062 | 1.864961e-51 | -8.615850e-47 |
| Msa0492330 | Msa1159160 | -0.810458 | 1.141233e-50 | -8.615850e-47 |
| Msa0500610 | Msa1159160 | -0.872660 | 2.681002e-67 | -8.615850e-47 |
| Msa0500630 | Msa1159160 | 0.825075 | 5.711106e-54 | -8.615850e-47 |
| Msa0500700 | Msa1159160 | -0.881097 | 3.184593e-70 | -8.615850e-47 |
| Msa0512320 | Msa1159160 | -0.800614 | 1.326882e-48 | -8.615850e-47 |
| Msa0512950 | Msa1159160 | -0.871828 | 5.076700e-67 | -8.615850e-47 |
| Msa0515440 | Msa1159160 | -0.801230 | 9.931731e-49 | -8.615850e-47 |
| Msa0515530 | Msa1159160 | -0.824487 | 7.859569e-54 | -8.615850e-47 |
| Msa0515580 | Msa1159160 | -0.828663 | 7.930456e-55 | -8.615850e-47 |
| Msa0520550 | Msa1159160 | -0.811880 | 5.611007e-51 | -8.615850e-47 |
| Msa0522820 | Msa1159160 | -0.824407 | 8.210386e-54 | -8.615850e-47 |
| Msa0524470 | Msa1159160 | -0.816021 | 6.853889e-52 | -8.615850e-47 |
| Msa0528990 | Msa1159160 | 0.821275 | 4.403740e-53 | -8.615850e-47 |
| Msa0530300 | Msa1159160 | 0.800753 | 1.243285e-48 | -8.615850e-47 |
| Msa0548420 | Msa1159160 | 0.831697 | 1.440932e-55 | -8.615850e-47 |
| Msa0548650 | Msa1159160 | -0.869577 | 2.790038e-66 | -8.615850e-47 |
| Msa0558240 | Msa1159160 | 0.800487 | 1.408517e-48 | -8.615850e-47 |
| Msa0558650 | Msa1159160 | 0.854686 | 1.043019e-61 | -8.615850e-47 |
| Msa0570600 | Msa1159160 | 0.806414 | 8.322605e-50 | -8.615850e-47 |
| Msa0574930 | Msa1159160 | 0.817663 | 2.933606e-52 | -8.615850e-47 |
| Msa0578410 | Msa1159160 | 0.817443 | 3.289089e-52 | -8.615850e-47 |
| Msa0858170 | Msa1159160 | 0.809049 | 2.293071e-50 | -8.615850e-47 |
| Msa0875070 | Msa1159160 | 0.852732 | 3.806497e-61 | -8.615850e-47 |
| Msa0888460 | Msa1159160 | -0.838855 | 2.243990e-57 | -8.615850e-47 |
| Msa0901270 | Msa1159160 | 0.804017 | 2.643396e-49 | -8.615850e-47 |
| Msa0931410 | Msa1159160 | -0.828463 | 8.864899e-55 | -8.615850e-47 |
| Msa0940130 | Msa1159160 | 0.824521 | 7.716050e-54 | -8.615850e-47 |
| Msa0940320 | Msa1159160 | 0.832885 | 7.321547e-56 | -8.615850e-47 |
| Msa0944020 | Msa1159160 | 0.826703 | 2.346024e-54 | -8.615850e-47 |
| Msa0945160 | Msa1159160 | -0.803505 | 3.376972e-49 | -8.615850e-47 |
| Msa0968470 | Msa1159160 | -0.831941 | 1.254900e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1159160 | MtrunA17_Chr7g0257341 | 99.226 | 517 | 4 | 0 | 1 | 517 | 1370 | 1886 | 0.0 | 1066 |
| Msa1159160 | MtrunA17_Chr7g0257341 | 46.610 | 236 | 121 | 2 | 84 | 319 | 549 | 779 | 6.13e-54 | 196 |
| Msa1159160 | MtrunA17_Chr4g0060421 | 41.135 | 282 | 156 | 4 | 68 | 343 | 108 | 385 | 3.24e-62 | 210 |
| Msa1159160 | MtrunA17_Chr3g0093091 | 41.993 | 281 | 150 | 6 | 46 | 319 | 572 | 846 | 5.83e-62 | 218 |
| Msa1159160 | MtrunA17_Chr4g0060401 | 42.349 | 281 | 154 | 3 | 68 | 343 | 586 | 863 | 1.05e-60 | 215 |
| Msa1159160 | MtrunA17_Chr4g0060431 | 44.574 | 258 | 133 | 4 | 68 | 319 | 573 | 826 | 2.49e-60 | 214 |
| Msa1159160 | MtrunA17_Chr4g0060501 | 40.780 | 282 | 157 | 4 | 68 | 343 | 588 | 865 | 3.52e-60 | 213 |
| Msa1159160 | MtrunA17_Chr3g0132711 | 44.074 | 270 | 132 | 7 | 66 | 319 | 152 | 418 | 6.38e-56 | 197 |
| Msa1159160 | MtrunA17_Chr3g0093041 | 44.030 | 268 | 131 | 7 | 68 | 319 | 140 | 404 | 1.56e-55 | 196 |
| Msa1159160 | MtrunA17_Chr4g0060471 | 42.986 | 221 | 121 | 2 | 125 | 343 | 1 | 218 | 2.95e-55 | 187 |
| Msa1159160 | MtrunA17_Chr7g0249091 | 26.708 | 322 | 198 | 12 | 11 | 305 | 5 | 315 | 4.97e-20 | 91.7 |
| Msa1159160 | MtrunA17_Chr8g0393151 | 24.153 | 236 | 166 | 7 | 89 | 321 | 19 | 244 | 3.56e-18 | 84.3 |
| Msa1159160 | MtrunA17_Chr8g0384391 | 27.604 | 192 | 130 | 4 | 100 | 285 | 47 | 235 | 3.96e-17 | 84.7 |
| Msa1159160 | MtrunA17_Chr1g0202431 | 32.877 | 146 | 96 | 2 | 113 | 257 | 54 | 198 | 1.07e-16 | 83.2 |
| Msa1159160 | MtrunA17_Chr3g0130331 | 26.407 | 231 | 156 | 5 | 121 | 339 | 70 | 298 | 1.04e-15 | 80.1 |
| Msa1159160 | MtrunA17_Chr4g0065231 | 26.482 | 253 | 169 | 9 | 101 | 339 | 68 | 317 | 8.58e-15 | 77.4 |
| Msa1159160 | MtrunA17_Chr1g0213091 | 27.232 | 224 | 148 | 6 | 107 | 319 | 120 | 339 | 8.83e-15 | 77.4 |
| Msa1159160 | MtrunA17_Chr1g0176451 | 30.890 | 191 | 118 | 7 | 105 | 285 | 19 | 205 | 1.20e-14 | 76.6 |
| Msa1159160 | MtrunA17_Chr1g0199471 | 27.083 | 192 | 124 | 5 | 89 | 270 | 501 | 686 | 8.41e-14 | 74.3 |
| Msa1159160 | MtrunA17_Chr4g0050221 | 28.718 | 195 | 118 | 5 | 93 | 274 | 17 | 203 | 1.16e-13 | 73.6 |
| Msa1159160 | MtrunA17_Chr3g0093331 | 25.556 | 270 | 163 | 8 | 129 | 387 | 18 | 260 | 3.98e-13 | 69.7 |
| Msa1159160 | MtrunA17_Chr2g0316301 | 26.667 | 195 | 134 | 4 | 98 | 285 | 62 | 254 | 4.27e-13 | 72.0 |
| Msa1159160 | MtrunA17_Chr1g0180971 | 31.288 | 163 | 98 | 5 | 106 | 257 | 410 | 569 | 4.48e-13 | 72.0 |
| Msa1159160 | MtrunA17_Chr7g0263351 | 27.511 | 229 | 149 | 7 | 102 | 318 | 120 | 343 | 7.95e-13 | 71.2 |
| Msa1159160 | MtrunA17_Chr7g0264441 | 30.464 | 151 | 93 | 4 | 117 | 257 | 287 | 435 | 1.14e-12 | 70.9 |
| Msa1159160 | MtrunA17_Chr1g0200651 | 27.895 | 190 | 127 | 5 | 99 | 280 | 80 | 267 | 1.58e-12 | 70.1 |
| Msa1159160 | MtrunA17_Chr1g0208391 | 22.222 | 279 | 203 | 5 | 65 | 330 | 49 | 326 | 2.73e-12 | 69.3 |
| Msa1159160 | MtrunA17_Chr4g0039251 | 25.000 | 224 | 149 | 6 | 103 | 312 | 84 | 302 | 4.93e-12 | 68.6 |
| Msa1159160 | MtrunA17_Chr4g0039261 | 25.100 | 251 | 174 | 5 | 79 | 319 | 21 | 267 | 5.10e-12 | 68.6 |
| Msa1159160 | MtrunA17_Chr5g0408061 | 28.426 | 197 | 129 | 6 | 97 | 285 | 53 | 245 | 1.86e-11 | 66.6 |
| Msa1159160 | MtrunA17_Chr7g0227391 | 23.246 | 228 | 148 | 7 | 110 | 327 | 443 | 653 | 2.16e-11 | 66.6 |
| Msa1159160 | MtrunA17_Chr5g0411621 | 27.391 | 230 | 149 | 7 | 126 | 345 | 68 | 289 | 4.50e-11 | 65.5 |
| Msa1159160 | MtrunA17_Chr3g0138261 | 26.923 | 182 | 115 | 7 | 116 | 285 | 877 | 1052 | 8.29e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1159160 | AT2G41700.1 | 70.577 | 520 | 150 | 2 | 1 | 517 | 1363 | 1882 | 0.0 | 756 |
| Msa1159160 | AT2G41700.1 | 43.644 | 236 | 128 | 2 | 84 | 319 | 544 | 774 | 2.41e-50 | 186 |
| Msa1159160 | AT2G41700.2 | 67.542 | 533 | 156 | 6 | 1 | 517 | 1315 | 1846 | 0.0 | 705 |
| Msa1159160 | AT2G41700.2 | 39.117 | 317 | 172 | 7 | 84 | 385 | 474 | 784 | 1.35e-51 | 190 |
| Msa1159160 | AT3G47760.3 | 43.617 | 282 | 149 | 4 | 68 | 343 | 590 | 867 | 1.18e-65 | 229 |
| Msa1159160 | AT3G47760.2 | 43.525 | 278 | 149 | 4 | 68 | 343 | 566 | 837 | 1.32e-64 | 226 |
| Msa1159160 | AT3G47760.1 | 43.525 | 278 | 149 | 4 | 68 | 343 | 556 | 827 | 1.43e-64 | 226 |
| Msa1159160 | AT3G47790.1 | 43.617 | 282 | 149 | 5 | 68 | 343 | 562 | 839 | 1.18e-63 | 223 |
| Msa1159160 | AT3G47780.1 | 42.958 | 284 | 151 | 5 | 42 | 319 | 564 | 842 | 4.50e-62 | 219 |
| Msa1159160 | AT3G47740.1 | 42.553 | 282 | 152 | 4 | 68 | 343 | 586 | 863 | 9.49e-62 | 218 |
| Msa1159160 | AT5G61700.1 | 38.286 | 350 | 200 | 9 | 1 | 343 | 508 | 848 | 9.70e-62 | 218 |
| Msa1159160 | AT3G47770.2 | 42.705 | 281 | 153 | 3 | 68 | 343 | 586 | 863 | 1.23e-61 | 218 |
| Msa1159160 | AT3G47770.1 | 42.705 | 281 | 153 | 3 | 68 | 343 | 560 | 837 | 1.41e-61 | 217 |
| Msa1159160 | AT3G47750.1 | 41.489 | 282 | 155 | 4 | 68 | 343 | 591 | 868 | 5.35e-61 | 216 |
| Msa1159160 | AT5G61740.3 | 43.985 | 266 | 138 | 5 | 60 | 319 | 417 | 677 | 1.03e-60 | 213 |
| Msa1159160 | AT5G61740.2 | 38.558 | 319 | 177 | 6 | 7 | 319 | 477 | 782 | 2.17e-60 | 214 |
| Msa1159160 | AT5G61740.1 | 38.558 | 319 | 177 | 6 | 7 | 319 | 511 | 816 | 3.43e-60 | 213 |
| Msa1159160 | AT3G47730.1 | 44.195 | 267 | 131 | 7 | 68 | 319 | 492 | 755 | 1.05e-54 | 198 |
| Msa1159160 | AT5G61730.1 | 44.030 | 268 | 132 | 6 | 68 | 320 | 484 | 748 | 1.55e-54 | 197 |
| Msa1159160 | AT5G61730.2 | 44.030 | 268 | 132 | 6 | 68 | 320 | 494 | 758 | 1.57e-54 | 197 |
| Msa1159160 | AT5G61690.2 | 42.086 | 278 | 144 | 6 | 53 | 319 | 485 | 756 | 4.85e-53 | 193 |
| Msa1159160 | AT5G61690.1 | 42.294 | 279 | 141 | 8 | 53 | 319 | 485 | 755 | 3.56e-51 | 188 |
| Msa1159160 | AT5G61700.2 | 38.144 | 291 | 164 | 8 | 1 | 284 | 508 | 789 | 8.68e-46 | 172 |
| Msa1159160 | AT5G61700.4 | 38.144 | 291 | 164 | 8 | 1 | 284 | 508 | 789 | 8.68e-46 | 172 |
| Msa1159160 | AT3G47790.2 | 42.411 | 224 | 119 | 5 | 68 | 285 | 443 | 662 | 1.47e-44 | 167 |
| Msa1159160 | AT3G47790.3 | 42.411 | 224 | 119 | 5 | 68 | 285 | 562 | 781 | 2.71e-44 | 167 |
| Msa1159160 | AT5G61700.3 | 43.972 | 141 | 74 | 2 | 71 | 207 | 574 | 713 | 2.43e-24 | 107 |
| Msa1159160 | AT1G65410.1 | 29.004 | 231 | 140 | 7 | 95 | 305 | 88 | 314 | 1.31e-18 | 87.8 |
| Msa1159160 | AT4G25750.1 | 29.213 | 178 | 121 | 4 | 110 | 285 | 31 | 205 | 5.75e-18 | 87.4 |
| Msa1159160 | AT5G52860.1 | 30.337 | 178 | 118 | 4 | 110 | 285 | 45 | 218 | 1.85e-17 | 85.9 |
| Msa1159160 | AT1G67940.1 | 27.731 | 238 | 159 | 7 | 79 | 314 | 21 | 247 | 1.44e-16 | 80.1 |
| Msa1159160 | AT1G53270.1 | 27.083 | 240 | 158 | 8 | 93 | 321 | 37 | 270 | 4.51e-16 | 81.6 |
| Msa1159160 | AT2G13610.1 | 27.083 | 192 | 131 | 4 | 100 | 285 | 53 | 241 | 5.00e-16 | 81.6 |
| Msa1159160 | AT1G27940.2 | 25.591 | 254 | 150 | 8 | 111 | 342 | 176 | 412 | 7.16e-16 | 81.6 |
| Msa1159160 | AT1G27940.1 | 25.591 | 254 | 150 | 8 | 111 | 342 | 390 | 626 | 9.63e-16 | 81.3 |
| Msa1159160 | AT3G55110.1 | 26.354 | 277 | 186 | 8 | 56 | 320 | 40 | 310 | 1.28e-15 | 80.5 |
| Msa1159160 | AT3G47770.3 | 40.909 | 110 | 62 | 1 | 68 | 174 | 586 | 695 | 2.54e-15 | 79.3 |
| Msa1159160 | AT3G55130.1 | 27.126 | 247 | 164 | 7 | 86 | 320 | 76 | 318 | 2.78e-15 | 79.3 |
| Msa1159160 | AT5G19410.2 | 22.764 | 246 | 173 | 5 | 110 | 339 | 76 | 320 | 6.96e-15 | 77.8 |
| Msa1159160 | AT5G19410.1 | 22.764 | 246 | 173 | 5 | 110 | 339 | 67 | 311 | 7.77e-15 | 77.8 |
| Msa1159160 | AT2G37010.2 | 29.940 | 167 | 109 | 3 | 112 | 270 | 503 | 669 | 1.02e-14 | 77.8 |
| Msa1159160 | AT2G37010.1 | 29.940 | 167 | 109 | 3 | 112 | 270 | 503 | 669 | 1.02e-14 | 77.8 |
| Msa1159160 | AT3G55100.1 | 27.803 | 223 | 146 | 6 | 107 | 318 | 49 | 267 | 1.19e-13 | 73.9 |
| Msa1159160 | AT3G55100.2 | 27.803 | 223 | 146 | 6 | 107 | 318 | 49 | 267 | 1.19e-13 | 73.9 |
| Msa1159160 | AT1G53390.1 | 31.034 | 174 | 105 | 7 | 102 | 264 | 517 | 686 | 1.33e-13 | 74.3 |
| Msa1159160 | AT1G28010.1 | 25.862 | 232 | 137 | 6 | 111 | 324 | 391 | 605 | 1.58e-13 | 73.9 |
| Msa1159160 | AT1G51500.1 | 26.190 | 210 | 142 | 4 | 110 | 309 | 45 | 251 | 2.91e-13 | 72.8 |
| Msa1159160 | AT3G28380.1 | 26.389 | 216 | 126 | 9 | 108 | 305 | 1011 | 1211 | 5.85e-13 | 72.4 |
| Msa1159160 | AT3G55090.1 | 25.778 | 225 | 150 | 7 | 107 | 319 | 105 | 324 | 1.24e-12 | 70.9 |
| Msa1159160 | AT4G15233.8 | 29.464 | 224 | 143 | 8 | 98 | 309 | 798 | 1018 | 1.44e-12 | 71.2 |
| Msa1159160 | AT4G15233.1 | 29.464 | 224 | 143 | 8 | 98 | 309 | 807 | 1027 | 1.45e-12 | 71.2 |
| Msa1159160 | AT4G15236.1 | 29.018 | 224 | 144 | 8 | 98 | 309 | 805 | 1025 | 1.46e-12 | 71.2 |
| Msa1159160 | AT4G15233.3 | 29.464 | 224 | 143 | 8 | 98 | 309 | 745 | 965 | 1.47e-12 | 71.2 |
| Msa1159160 | AT4G15233.6 | 29.464 | 224 | 143 | 8 | 98 | 309 | 745 | 965 | 1.47e-12 | 71.2 |
| Msa1159160 | AT4G15233.2 | 29.464 | 224 | 143 | 8 | 98 | 309 | 807 | 1027 | 1.56e-12 | 70.9 |
| Msa1159160 | AT4G15233.7 | 29.464 | 224 | 143 | 8 | 98 | 309 | 789 | 1009 | 1.67e-12 | 70.9 |
| Msa1159160 | AT3G53510.1 | 27.234 | 235 | 156 | 6 | 107 | 328 | 124 | 356 | 3.62e-12 | 69.3 |
| Msa1159160 | AT1G10680.1 | 23.832 | 214 | 150 | 7 | 108 | 314 | 377 | 584 | 4.62e-12 | 69.3 |
| Msa1159160 | AT1G10680.2 | 23.832 | 214 | 150 | 7 | 108 | 314 | 377 | 584 | 5.34e-12 | 69.3 |
| Msa1159160 | AT1G17840.1 | 26.540 | 211 | 139 | 6 | 110 | 309 | 70 | 275 | 7.50e-12 | 68.6 |
| Msa1159160 | AT2G39350.1 | 26.201 | 229 | 149 | 8 | 107 | 320 | 107 | 330 | 8.35e-12 | 68.2 |
| Msa1159160 | AT2G01320.1 | 24.151 | 265 | 188 | 6 | 67 | 320 | 48 | 310 | 8.55e-12 | 68.2 |
| Msa1159160 | AT2G01320.4 | 24.151 | 265 | 188 | 6 | 67 | 320 | 48 | 310 | 8.55e-12 | 68.2 |
| Msa1159160 | AT2G01320.2 | 24.151 | 265 | 188 | 6 | 67 | 320 | 48 | 310 | 9.02e-12 | 68.2 |
| Msa1159160 | AT2G01320.3 | 24.151 | 265 | 188 | 6 | 67 | 320 | 48 | 310 | 9.11e-12 | 68.2 |
| Msa1159160 | AT2G01320.7 | 24.151 | 265 | 188 | 6 | 67 | 320 | 48 | 310 | 9.34e-12 | 67.8 |
| Msa1159160 | AT2G01320.6 | 24.151 | 265 | 188 | 6 | 67 | 320 | 48 | 310 | 9.34e-12 | 67.8 |
| Msa1159160 | AT2G01320.8 | 24.151 | 265 | 188 | 6 | 67 | 320 | 48 | 310 | 9.76e-12 | 68.2 |
| Msa1159160 | AT2G01320.5 | 24.151 | 265 | 188 | 6 | 67 | 320 | 48 | 310 | 9.76e-12 | 68.2 |
| Msa1159160 | AT3G28345.1 | 23.256 | 215 | 150 | 7 | 112 | 317 | 1015 | 1223 | 1.22e-11 | 68.2 |
| Msa1159160 | AT4G25960.1 | 24.390 | 205 | 142 | 6 | 117 | 314 | 1055 | 1253 | 1.68e-11 | 67.8 |
| Msa1159160 | AT1G71960.1 | 27.320 | 194 | 132 | 4 | 95 | 280 | 69 | 261 | 3.15e-11 | 66.2 |
| Msa1159160 | AT5G06530.2 | 31.818 | 154 | 88 | 5 | 116 | 257 | 186 | 334 | 5.00e-11 | 65.9 |
| Msa1159160 | AT5G06530.1 | 31.818 | 154 | 88 | 5 | 116 | 257 | 186 | 334 | 5.00e-11 | 65.9 |
| Msa1159160 | AT5G06530.3 | 31.818 | 154 | 88 | 5 | 116 | 257 | 186 | 334 | 5.74e-11 | 65.5 |
| Msa1159160 | AT2G37360.1 | 26.786 | 224 | 147 | 7 | 107 | 318 | 131 | 349 | 6.56e-11 | 65.5 |
| Msa1159160 | AT3G21090.1 | 24.873 | 197 | 134 | 5 | 118 | 304 | 54 | 246 | 9.84e-11 | 64.7 |
Find 121 sgRNAs with CRISPR-Local
Find 338 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGATTCAAGATTTAATAAC+TGG | 0.217549 | 7_4:-48755606 | None:intergenic |
| GGAATCTATTTACAATTAAA+TGG | 0.221459 | 7_4:-48755584 | None:intergenic |
| TTCATTAACTTTCTCAGTTC+AGG | 0.252677 | 7_4:+48751393 | Msa1159160:CDS |
| CCCACATAATACTACTTATC+TGG | 0.270769 | 7_4:+48751104 | Msa1159160:CDS |
| TGAAAGAAAAGGATGAAATA+AGG | 0.280003 | 7_4:-48755418 | None:intergenic |
| AGGTCCGTAACAAAAGTTTC+TGG | 0.300156 | 7_4:-48751147 | None:intergenic |
| TCTGGGGAAGATTCTAATAA+AGG | 0.304321 | 7_4:-48751129 | None:intergenic |
| TCAGAGATGATAGGCTTAAT+TGG | 0.321974 | 7_4:+48754119 | Msa1159160:CDS |
| AACACTCTGCCAAACTATTC+AGG | 0.328435 | 7_4:+48753977 | Msa1159160:CDS |
| AAAGTATTTCCTGAATAGTT+TGG | 0.330538 | 7_4:-48753986 | None:intergenic |
| TTGTACCATAATCCCTATTC+TGG | 0.334945 | 7_4:-48753653 | None:intergenic |
| GTTCAGGAAGGAGAATGTTT+TGG | 0.336088 | 7_4:+48751409 | Msa1159160:CDS |
| ATAAGTTTGACAGGTTGTTA+TGG | 0.338489 | 7_4:+48752881 | Msa1159160:intron |
| AGAGAAGAATCATGGGAAAA+AGG | 0.341827 | 7_4:+48751360 | Msa1159160:CDS |
| CAAGCCTTGTGCACCAGAAT+AGG | 0.342062 | 7_4:+48753640 | Msa1159160:CDS |
| GAAAGGAATAGAGTACTTTC+AGG | 0.344191 | 7_4:+48751195 | Msa1159160:CDS |
| CTCATGAATTAGCTGCAAAA+TGG | 0.346080 | 7_4:-48755391 | None:intergenic |
| AGGTCATTAAGTAAGCTTCT+AGG | 0.346332 | 7_4:-48754026 | None:intergenic |
| GGGCCCTAGGTGAGATTCTA+AGG | 0.355791 | 7_4:+48755529 | Msa1159160:three_prime_UTR |
| GTGCACCAGAATAGGGATTA+TGG | 0.362796 | 7_4:+48753648 | Msa1159160:CDS |
| CACCACTTCTTGATCTTGAA+TGG | 0.372170 | 7_4:-48751063 | None:intergenic |
| TCTCACCTAGGGCCCTCTAT+TGG | 0.376371 | 7_4:-48755521 | None:intergenic |
| TTTATTCTCTGTTCATTTCG+TGG | 0.383202 | 7_4:+48754709 | Msa1159160:CDS |
| TCTGTTGCAATTGCAATGAT+TGG | 0.383250 | 7_4:+48752984 | Msa1159160:CDS |
| TACATATTTACGAGCAGCCT+TGG | 0.390769 | 7_4:-48751890 | None:intergenic |
| GAATGGATCCCATTGCAAAA+AGG | 0.403927 | 7_4:+48753533 | Msa1159160:CDS |
| ATGACCTTGAAATTTGCATT+GGG | 0.406534 | 7_4:+48754042 | Msa1159160:CDS |
| GGCTTAATTGGACGCTTGCT+TGG | 0.407216 | 7_4:+48754131 | Msa1159160:CDS |
| AAGCCTTGTGCACCAGAATA+GGG | 0.419610 | 7_4:+48753641 | Msa1159160:CDS |
| TGTCTATGATGGGGCCTCTC+AGG | 0.420414 | 7_4:+48754193 | Msa1159160:CDS |
| ATTCTTGATGAGCCGTCAAC+AGG | 0.434871 | 7_4:+48753023 | Msa1159160:CDS |
| AAGATTGCGCAAGTAGATAA+TGG | 0.445005 | 7_4:-48751232 | None:intergenic |
| GAAAGAAAAGGATGAAATAA+GGG | 0.447190 | 7_4:-48755417 | None:intergenic |
| TCCACAATTTGATGCTCTGT+TGG | 0.447397 | 7_4:+48752033 | Msa1159160:CDS |
| ACATTGTCTATTGTGTAGTC+TGG | 0.452492 | 7_4:-48752109 | None:intergenic |
| AATGACCTTGAAATTTGCAT+TGG | 0.459828 | 7_4:+48754041 | Msa1159160:CDS |
| TTGACATAACTACCTGTTGA+CGG | 0.463474 | 7_4:-48753035 | None:intergenic |
| GGTCCGTAACAAAAGTTTCT+GGG | 0.467121 | 7_4:-48751146 | None:intergenic |
| GTAGATAATGGCATTGTCAA+TGG | 0.468988 | 7_4:-48751220 | None:intergenic |
| TGCTGTACACCTGTCTATGA+TGG | 0.473353 | 7_4:+48754182 | Msa1159160:CDS |
| ATTTCGTGGAGCAAGATGCC+AGG | 0.479821 | 7_4:+48754723 | Msa1159160:CDS |
| TATTCTGAAGAGAAGAATCA+TGG | 0.485790 | 7_4:+48751352 | Msa1159160:CDS |
| AGCTTGACATCAGAGATGAT+AGG | 0.486126 | 7_4:+48754110 | Msa1159160:CDS |
| ATATTGTCTCCAGAGTTGAT+TGG | 0.486618 | 7_4:-48755364 | None:intergenic |
| TGCTTAAACCATTGTATCCC+TGG | 0.486619 | 7_4:-48754741 | None:intergenic |
| ACATATTTACGAGCAGCCTT+GGG | 0.488105 | 7_4:-48751889 | None:intergenic |
| GCATCACTTTATGAAAGAAA+AGG | 0.495565 | 7_4:-48755429 | None:intergenic |
| ACCATCTCGAAGTAATTGTT+CGG | 0.496965 | 7_4:-48754225 | None:intergenic |
| CAGCCTCAGCCAATCAACTC+TGG | 0.498815 | 7_4:+48755355 | Msa1159160:CDS |
| TCCAGATAAGTAGTATTATG+TGG | 0.499461 | 7_4:-48751105 | None:intergenic |
| TCTCCAGAGTTGATTGGCTG+AGG | 0.503985 | 7_4:-48755358 | None:intergenic |
| TTCTTTCATAAAGTGATGCA+TGG | 0.504938 | 7_4:+48755433 | Msa1159160:three_prime_UTR |
| GGTGCTGATTCCGTCACCTC+AGG | 0.508032 | 7_4:+48754065 | Msa1159160:CDS |
| CTAGTAGTGAAATCCAATAG+AGG | 0.509892 | 7_4:+48755508 | Msa1159160:three_prime_UTR |
| GCTGTACACCTGTCTATGAT+GGG | 0.513535 | 7_4:+48754183 | Msa1159160:CDS |
| ATTTACGAGCAGCCTTGGGA+TGG | 0.524449 | 7_4:-48751885 | None:intergenic |
| ACAGGTTGTTATGGAAAAGC+TGG | 0.534890 | 7_4:+48752890 | Msa1159160:intron |
| TTGGACTTCTGGAAGCAAGC+AGG | 0.540504 | 7_4:+48755229 | Msa1159160:CDS |
| GGGGAAGAATCTCCTTCTGA+TGG | 0.541283 | 7_4:+48751829 | Msa1159160:intron |
| CCTCCACTAAGTGAAAATGA+TGG | 0.541705 | 7_4:-48752945 | None:intergenic |
| GGCTCATCAAGAATGACAAT+AGG | 0.542563 | 7_4:-48753014 | None:intergenic |
| AGTAAGCTTCTAGGTTGAGA+AGG | 0.543579 | 7_4:-48754017 | None:intergenic |
| CACTCAGAAAACACGGGCAA+CGG | 0.543746 | 7_4:-48754649 | None:intergenic |
| TTTACGAGCAGCCTTGGGAT+GGG | 0.551498 | 7_4:-48751884 | None:intergenic |
| AATCCCTATTCTGGTGCACA+AGG | 0.561946 | 7_4:-48753644 | None:intergenic |
| TGAGAGGCCCCATCATAGAC+AGG | 0.562344 | 7_4:-48754191 | None:intergenic |
| TCACATCCACGTCTTCATTG+AGG | 0.562490 | 7_4:-48751167 | None:intergenic |
| GGTGGACAACTAAGATGCAT+TGG | 0.563681 | 7_4:+48753765 | Msa1159160:CDS |
| GTAAGCTTCTAGGTTGAGAA+GGG | 0.563779 | 7_4:-48754016 | None:intergenic |
| TTCAAGATCAAGAAGTGGTG+GGG | 0.565025 | 7_4:+48751066 | Msa1159160:CDS |
| ATTAAATGGCACTATAATGA+CGG | 0.566601 | 7_4:-48755570 | None:intergenic |
| GAAATCCAATAGAGGGCCCT+AGG | 0.567136 | 7_4:+48755516 | Msa1159160:three_prime_UTR |
| CATTCAAGATCAAGAAGTGG+TGG | 0.568508 | 7_4:+48751064 | Msa1159160:CDS |
| CTCGACAGCAAGATAACAGA+TGG | 0.569124 | 7_4:-48750777 | None:intergenic |
| TCCGAACAATTACTTCGAGA+TGG | 0.574072 | 7_4:+48754224 | Msa1159160:CDS |
| AATGGAGTTAATTTGAGCGA+AGG | 0.577059 | 7_4:-48751045 | None:intergenic |
| GCCGCAGTTACCTTGTGATG+AGG | 0.577769 | 7_4:+48755185 | Msa1159160:intron |
| ATTCAAGATCAAGAAGTGGT+GGG | 0.580982 | 7_4:+48751065 | Msa1159160:CDS |
| TCCAACAGAGCATCAAATTG+TGG | 0.582134 | 7_4:-48752034 | None:intergenic |
| TGCAATGGAGGTATTTCCTG+AGG | 0.584220 | 7_4:-48754081 | None:intergenic |
| CAACCACCACTCAGAAAACA+CGG | 0.588201 | 7_4:-48754656 | None:intergenic |
| CTACTTGCGCAATCTTCGCA+AGG | 0.588657 | 7_4:+48751239 | Msa1159160:CDS |
| CAAGCTAATTTCTGCAATGG+AGG | 0.588730 | 7_4:-48754093 | None:intergenic |
| AGGCCTTAGAATCTCACCTA+GGG | 0.589835 | 7_4:-48755532 | None:intergenic |
| TCATCAAGAATGACAATAGG+AGG | 0.590201 | 7_4:-48753011 | None:intergenic |
| TCAAGATCAAGAAGTGGTGG+GGG | 0.593702 | 7_4:+48751067 | Msa1159160:CDS |
| GGAGGTATTTCCTGAGGTGA+CGG | 0.594156 | 7_4:-48754075 | None:intergenic |
| GGGAAGAATCTCCTTCTGAT+GGG | 0.594281 | 7_4:+48751830 | Msa1159160:CDS |
| TGGTTTAAGCATCAGATACC+AGG | 0.594986 | 7_4:+48754753 | Msa1159160:CDS |
| CCAGATAAGTAGTATTATGT+GGG | 0.596987 | 7_4:-48751104 | None:intergenic |
| TGGCAATCATCTAGAACTAG+AGG | 0.597765 | 7_4:+48753815 | Msa1159160:CDS |
| TAGTAGTGAAATCCAATAGA+GGG | 0.598318 | 7_4:+48755509 | Msa1159160:three_prime_UTR |
| ATAAAAGCAGTCCCATCAGA+AGG | 0.602253 | 7_4:-48751841 | None:intergenic |
| TGTCAAGCTAATTTCTGCAA+TGG | 0.602999 | 7_4:-48754096 | None:intergenic |
| GACGGACTCTACAATATACA+AGG | 0.604208 | 7_4:-48755552 | None:intergenic |
| GCAAGATGCCAGGGATACAA+TGG | 0.608745 | 7_4:+48754733 | Msa1159160:CDS |
| CATCTGTTATCTTGCTGTCG+AGG | 0.609501 | 7_4:+48750778 | Msa1159160:CDS |
| ACGTGGATGTGAAAGCAGAA+AGG | 0.613932 | 7_4:+48751178 | Msa1159160:CDS |
| AAGGCCTTAGAATCTCACCT+AGG | 0.617666 | 7_4:-48755533 | None:intergenic |
| GACCTTGAAATTTGCATTGG+GGG | 0.618862 | 7_4:+48754044 | Msa1159160:CDS |
| TTAACTTTCTCAGTTCAGGA+AGG | 0.620000 | 7_4:+48751397 | Msa1159160:CDS |
| AGACATATGTTCCCATCCCA+AGG | 0.620031 | 7_4:+48751873 | Msa1159160:CDS |
| TTTCGTGGAGCAAGATGCCA+GGG | 0.621930 | 7_4:+48754724 | Msa1159160:CDS |
| ACAACGCTTTCTATGTTATG+CGG | 0.624049 | 7_4:+48751463 | Msa1159160:CDS |
| CTCCATTCAAGATCAAGAAG+TGG | 0.624082 | 7_4:+48751061 | Msa1159160:CDS |
| TCCACAGAGCTCACTTCAGT+AGG | 0.625213 | 7_4:-48753948 | None:intergenic |
| ATTCTGAAGAGAAGAATCAT+GGG | 0.626966 | 7_4:+48751353 | Msa1159160:CDS |
| GTCCGTAACAAAAGTTTCTG+GGG | 0.629074 | 7_4:-48751145 | None:intergenic |
| GGTTGTTATGGAAAAGCTGG+TGG | 0.637120 | 7_4:+48752893 | Msa1159160:intron |
| AGGGAAAAGTCCTCATCACA+AGG | 0.642839 | 7_4:-48755195 | None:intergenic |
| TTCGGATAACTGTTCCTGAG+AGG | 0.643859 | 7_4:-48754207 | None:intergenic |
| AGATTCAAGATTTAATAACT+GGG | 0.651359 | 7_4:-48755605 | None:intergenic |
| AACCACCACTCAGAAAACAC+GGG | 0.654674 | 7_4:-48754655 | None:intergenic |
| TCTAGAATCTCAACTAGACG+AGG | 0.668384 | 7_4:+48753574 | Msa1159160:CDS |
| GACAGCAAGATAACAGATGG+AGG | 0.679096 | 7_4:-48750774 | None:intergenic |
| TGACCTTGAAATTTGCATTG+GGG | 0.686901 | 7_4:+48754043 | Msa1159160:CDS |
| CTGTACACCTGTCTATGATG+GGG | 0.687052 | 7_4:+48754184 | Msa1159160:CDS |
| TACGGACCTCAATGAAGACG+TGG | 0.694129 | 7_4:+48751161 | Msa1159160:CDS |
| ACCTACTGAAGTGAGCTCTG+TGG | 0.701845 | 7_4:+48753947 | Msa1159160:CDS |
| TTTCATAAAGTGATGCATGG+TGG | 0.724986 | 7_4:+48755436 | Msa1159160:three_prime_UTR |
| GCATAACATAGAAAGCGTTG+TGG | 0.725168 | 7_4:-48751461 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATTTACTTATTTCATAA+AGG | + | chr7_4:48751568-48751587 | Msa1159160:intron | 10.0% |
| !! | AATTTGCAAATAAATAATAA+TGG | - | chr7_4:48752580-48752599 | None:intergenic | 10.0% |
| !! | ATTGAAAATATGTAATAATT+AGG | - | chr7_4:48752850-48752869 | None:intergenic | 10.0% |
| !!! | TTTATATTGTTTTTTTCTAA+AGG | + | chr7_4:48753740-48753759 | Msa1159160:intron | 10.0% |
| !! | ACATATTAACAATAAAAAAT+TGG | - | chr7_4:48754376-48754395 | None:intergenic | 10.0% |
| !! | AATAATAAGAAACTAAATAG+AGG | - | chr7_4:48750828-48750847 | None:intergenic | 15.0% |
| !!! | ATTTATTTTTTATTGACACT+CGG | + | chr7_4:48751009-48751028 | Msa1159160:CDS | 15.0% |
| !! | AATAAACACAAAACATAAAA+GGG | - | chr7_4:48751612-48751631 | None:intergenic | 15.0% |
| !! | AAATAAACACAAAACATAAA+AGG | - | chr7_4:48751613-48751632 | None:intergenic | 15.0% |
| !! | TAAAATTTCAATCTATGATT+GGG | - | chr7_4:48751953-48751972 | None:intergenic | 15.0% |
| !!! | TTTCTTATTTTTAAGATTTG+TGG | - | chr7_4:48752240-48752259 | None:intergenic | 15.0% |
| !!! | GTAAATTTTTACACTATATA+AGG | - | chr7_4:48752348-48752367 | None:intergenic | 15.0% |
| !! | AAATATGTAATTCTTAGTTT+CGG | + | chr7_4:48753910-48753929 | Msa1159160:intron | 15.0% |
| !! | AAAAATTAGATGAAAAGACT+TGG | - | chr7_4:48750805-48750824 | None:intergenic | 20.0% |
| !!! | TTTATTTTTTATTGACACTC+GGG | + | chr7_4:48751010-48751029 | Msa1159160:CDS | 20.0% |
| !!! | TTAACAATGCAGATTTTAAT+AGG | - | chr7_4:48751545-48751564 | None:intergenic | 20.0% |
| !! | TTCTAATTTAGATAAAGCAA+AGG | + | chr7_4:48751650-48751669 | Msa1159160:intron | 20.0% |
| !!! | ACTACAAAAAACATTTTTTC+TGG | - | chr7_4:48751728-48751747 | None:intergenic | 20.0% |
| !! | GTAAAATTTCAATCTATGAT+TGG | - | chr7_4:48751954-48751973 | None:intergenic | 20.0% |
| !!! | TCATGAAAATAAATTTTCAG+AGG | - | chr7_4:48752434-48752453 | None:intergenic | 20.0% |
| !! | TTGTTCAAATATGGAATTTA+AGG | - | chr7_4:48752625-48752644 | None:intergenic | 20.0% |
| !!! | AATTTTCTGTTGTTCAAATA+TGG | - | chr7_4:48752634-48752653 | None:intergenic | 20.0% |
| !!! | TCTAAAATTAAAATGGATAC+AGG | - | chr7_4:48753093-48753112 | None:intergenic | 20.0% |
| !!! | TCGAAACTCTAAAATTAAAA+TGG | - | chr7_4:48753100-48753119 | None:intergenic | 20.0% |
| !!! | AATTTTGATAAGAGAATTGA+AGG | - | chr7_4:48753235-48753254 | None:intergenic | 20.0% |
| !!! | ATTAATTTGTTTCAAATGAG+AGG | - | chr7_4:48753403-48753422 | None:intergenic | 20.0% |
| !!! | TATTGTTTTTTTCTAAAGGT+TGG | + | chr7_4:48753744-48753763 | Msa1159160:intron | 20.0% |
| !! | ACTAAGAATTACATATTTGA+AGG | - | chr7_4:48753908-48753927 | None:intergenic | 20.0% |
| !!! | AATTTCTGAGAATTTTTGTT+TGG | - | chr7_4:48754683-48754702 | None:intergenic | 20.0% |
| !!! | AACTTATTTGTTAGGTTTTA+TGG | + | chr7_4:48754895-48754914 | Msa1159160:intron | 20.0% |
| !!! | ACTTATTTGTTAGGTTTTAT+GGG | + | chr7_4:48754896-48754915 | Msa1159160:intron | 20.0% |
| !! | GGAATCTATTTACAATTAAA+TGG | - | chr7_4:48755587-48755606 | None:intergenic | 20.0% |
| !! | AGATTCAAGATTTAATAACT+GGG | - | chr7_4:48755608-48755627 | None:intergenic | 20.0% |
| ! | AACACATTTACACAGATATT+TGG | + | chr7_4:48750933-48750952 | Msa1159160:intron | 25.0% |
| ! | TCTGTGATACAAAAGAAAAT+GGG | - | chr7_4:48750984-48751003 | None:intergenic | 25.0% |
| !!! | TTTGGTTTTTTAGGAACAAA+TGG | + | chr7_4:48751427-48751446 | Msa1159160:CDS | 25.0% |
| !! | TATGCGGTATATCATATTTT+TGG | + | chr7_4:48751479-48751498 | Msa1159160:intron | 25.0% |
| !! | ATGCGGTATATCATATTTTT+GGG | + | chr7_4:48751480-48751499 | Msa1159160:intron | 25.0% |
| ! | TAGTTATGATTGCTCAAAAT+TGG | + | chr7_4:48751744-48751763 | Msa1159160:intron | 25.0% |
| !! | AAATTTTACCTAAATCCATC+AGG | + | chr7_4:48751965-48751984 | Msa1159160:intron | 25.0% |
| ! | TGGAATTTAAGGAAACATAT+TGG | - | chr7_4:48752614-48752633 | None:intergenic | 25.0% |
| ! | TTGACAATAATAAGTTTGAC+AGG | + | chr7_4:48752872-48752891 | Msa1159160:intron | 25.0% |
| !!! | AGATTAGGCTTTTAAAACAA+GGG | - | chr7_4:48753138-48753157 | None:intergenic | 25.0% |
| !!! | AAGATTAGGCTTTTAAAACA+AGG | - | chr7_4:48753139-48753158 | None:intergenic | 25.0% |
| ! | ACCAAATGAACTAAAAGATT+AGG | - | chr7_4:48753153-48753172 | None:intergenic | 25.0% |
| ! | CATAAAATATTAGATCTGAC+AGG | - | chr7_4:48753503-48753522 | None:intergenic | 25.0% |
| ! | AAATTGATCAGTATGTTTGT+GGG | - | chr7_4:48753723-48753742 | None:intergenic | 25.0% |
| ! | TAAATTGATCAGTATGTTTG+TGG | - | chr7_4:48753724-48753743 | None:intergenic | 25.0% |
| !! | AAAGTATTTCCTGAATAGTT+TGG | - | chr7_4:48753989-48754008 | None:intergenic | 25.0% |
| !!! | AATAAGAATCAAGCTTTGAA+AGG | - | chr7_4:48754264-48754283 | None:intergenic | 25.0% |
| ! | CAAAAAGTTAATTCTCTCAT+CGG | + | chr7_4:48754305-48754324 | Msa1159160:intron | 25.0% |
| ! | TGTGTTTGTATATCTGAAAA+AGG | + | chr7_4:48754332-48754351 | Msa1159160:intron | 25.0% |
| ! | AATAAAAAATTGGTCAGTAC+GGG | - | chr7_4:48754366-48754385 | None:intergenic | 25.0% |
| ! | CAATAAAAAATTGGTCAGTA+CGG | - | chr7_4:48754367-48754386 | None:intergenic | 25.0% |
| ! | TTGTTAATATGTAAGTTCAG+TGG | + | chr7_4:48754384-48754403 | Msa1159160:intron | 25.0% |
| !! | TACAAGCTTATTCTTTTACA+TGG | + | chr7_4:48754408-48754427 | Msa1159160:intron | 25.0% |
| ! | AGAATAGCATTTATGCATTA+TGG | - | chr7_4:48754582-48754601 | None:intergenic | 25.0% |
| ! | ATAATGCATAAATGCTATTC+TGG | + | chr7_4:48754581-48754600 | Msa1159160:intron | 25.0% |
| ! | ATTACCAACAGAATAGAAAA+GGG | - | chr7_4:48754617-48754636 | None:intergenic | 25.0% |
| ! | TTATGGTAAATTCCACATTA+TGG | + | chr7_4:48754800-48754819 | Msa1159160:intron | 25.0% |
| ! | TGAATATTAAGTAGACTAGT+TGG | + | chr7_4:48754865-48754884 | Msa1159160:intron | 25.0% |
| ! | GACATTCTAACTTATTTGTT+AGG | + | chr7_4:48754887-48754906 | Msa1159160:intron | 25.0% |
| ! | TTTGACATTACTGAACATAA+AGG | - | chr7_4:48755047-48755066 | None:intergenic | 25.0% |
| ! | ATGTCAAACATATCTTTAGT+TGG | + | chr7_4:48755059-48755078 | Msa1159160:intron | 25.0% |
| ! | GAAAGAAAAGGATGAAATAA+GGG | - | chr7_4:48755420-48755439 | None:intergenic | 25.0% |
| ! | TGAAAGAAAAGGATGAAATA+AGG | - | chr7_4:48755421-48755440 | None:intergenic | 25.0% |
| ! | ATTAAATGGCACTATAATGA+CGG | - | chr7_4:48755573-48755592 | None:intergenic | 25.0% |
| ! | CAGATTCAAGATTTAATAAC+TGG | - | chr7_4:48755609-48755628 | None:intergenic | 25.0% |
| CTCTGTGATACAAAAGAAAA+TGG | - | chr7_4:48750985-48751004 | None:intergenic | 30.0% | |
| CCAGATAAGTAGTATTATGT+GGG | - | chr7_4:48751107-48751126 | None:intergenic | 30.0% | |
| TCCAGATAAGTAGTATTATG+TGG | - | chr7_4:48751108-48751127 | None:intergenic | 30.0% | |
| AAGTTGAAGAAAACAATCCT+GGG | - | chr7_4:48751270-48751289 | None:intergenic | 30.0% | |
| AAAGTTGAAGAAAACAATCC+TGG | - | chr7_4:48751271-48751290 | None:intergenic | 30.0% | |
| !! | GTATTGTTTTGTGATTACCA+TGG | + | chr7_4:48751304-48751323 | Msa1159160:intron | 30.0% |
| ! | CGATTTCTTTTCTGAATTGA+AGG | + | chr7_4:48751327-48751346 | Msa1159160:intron | 30.0% |
| ! | TATTCTGAAGAGAAGAATCA+TGG | + | chr7_4:48751352-48751371 | Msa1159160:CDS | 30.0% |
| ! | ATTCTGAAGAGAAGAATCAT+GGG | + | chr7_4:48751353-48751372 | Msa1159160:CDS | 30.0% |
| TTCATTAACTTTCTCAGTTC+AGG | + | chr7_4:48751393-48751412 | Msa1159160:CDS | 30.0% | |
| !!! | GGAGAATGTTTTGGTTTTTT+AGG | + | chr7_4:48751418-48751437 | Msa1159160:CDS | 30.0% |
| !!! | TGTGTTTTTTGTTTCTGTAC+AGG | + | chr7_4:48751808-48751827 | Msa1159160:intron | 30.0% |
| !!! | GTGTTTTTTGTTTCTGTACA+GGG | + | chr7_4:48751809-48751828 | Msa1159160:intron | 30.0% |
| !!! | TGTTTTTTGTTTCTGTACAG+GGG | + | chr7_4:48751810-48751829 | Msa1159160:intron | 30.0% |
| TAAAAAAAGTAAGAGCCTGA+TGG | - | chr7_4:48751983-48752002 | None:intergenic | 30.0% | |
| TTTAGTGCTTATCTTCATCA+GGG | + | chr7_4:48752155-48752174 | Msa1159160:intron | 30.0% | |
| ! | AATCATTTAGCTCACAAACA+AGG | - | chr7_4:48752278-48752297 | None:intergenic | 30.0% |
| AGGAAGATAAATGTCTGTAT+GGG | - | chr7_4:48752328-48752347 | None:intergenic | 30.0% | |
| AAGGAAGATAAATGTCTGTA+TGG | - | chr7_4:48752329-48752348 | None:intergenic | 30.0% | |
| ! | CAACACAAATATTGACCTTT+TGG | - | chr7_4:48752518-48752537 | None:intergenic | 30.0% |
| CAAAAGGTCAATATTTGTGT+TGG | + | chr7_4:48752516-48752535 | Msa1159160:intron | 30.0% | |
| !! | ATAATGGAGTTTTTCTTCGT+AGG | - | chr7_4:48752564-48752583 | None:intergenic | 30.0% |
| TGAACAACAGAAAATTGTTG+TGG | + | chr7_4:48752638-48752657 | Msa1159160:intron | 30.0% | |
| TACGTTCAGTAGATAGTTAA+TGG | - | chr7_4:48752711-48752730 | None:intergenic | 30.0% | |
| ! | TTTTGCAACAACAATCTAAG+TGG | - | chr7_4:48752761-48752780 | None:intergenic | 30.0% |
| ATAAGTTTGACAGGTTGTTA+TGG | + | chr7_4:48752881-48752900 | Msa1159160:intron | 30.0% | |
| ! | AAACCATCATTTTCACTTAG+TGG | + | chr7_4:48752942-48752961 | Msa1159160:CDS | 30.0% |
| ! | AGTTTCGAGAAACACTTTTA+AGG | + | chr7_4:48753112-48753131 | Msa1159160:intron | 30.0% |
| !!! | GCCTAATCTTTTAGTTCATT+TGG | + | chr7_4:48753149-48753168 | Msa1159160:intron | 30.0% |
| TGTTCATAATGCATCAATAC+TGG | + | chr7_4:48753302-48753321 | Msa1159160:intron | 30.0% | |
| ACTGGTGAAATTTGAATTGA+AGG | + | chr7_4:48753320-48753339 | Msa1159160:intron | 30.0% | |
| CTGGTGAAATTTGAATTGAA+GGG | + | chr7_4:48753321-48753340 | Msa1159160:intron | 30.0% | |
| TGGTGAAATTTGAATTGAAG+GGG | + | chr7_4:48753322-48753341 | Msa1159160:intron | 30.0% | |
| ! | TAATATTTTATGCTTCCCTC+AGG | + | chr7_4:48753511-48753530 | Msa1159160:intron | 30.0% |
| !!! | TGTTTTTTTCTAAAGGTTGG+TGG | + | chr7_4:48753747-48753766 | Msa1159160:intron | 30.0% |
| !!! | AATCTTGTTTTTAGATGCTG+TGG | - | chr7_4:48753795-48753814 | None:intergenic | 30.0% |
| CAGCATCTAAAAACAAGATT+TGG | + | chr7_4:48753795-48753814 | Msa1159160:CDS | 30.0% | |
| !! | TCTAGAACTAGAGGTATTTA+TGG | + | chr7_4:48753824-48753843 | Msa1159160:intron | 30.0% |
| TTTATGGTTATGACAACAAG+AGG | + | chr7_4:48753840-48753859 | Msa1159160:intron | 30.0% | |
| AATGACCTTGAAATTTGCAT+TGG | + | chr7_4:48754041-48754060 | Msa1159160:CDS | 30.0% | |
| ATGACCTTGAAATTTGCATT+GGG | + | chr7_4:48754042-48754061 | Msa1159160:CDS | 30.0% | |
| ATAAAAAATTGGTCAGTACG+GGG | - | chr7_4:48754365-48754384 | None:intergenic | 30.0% | |
| !! | TTTACATGGTGCTACATATA+CGG | + | chr7_4:48754422-48754441 | Msa1159160:intron | 30.0% |
| TTACCAACAGAATAGAAAAG+GGG | - | chr7_4:48754616-48754635 | None:intergenic | 30.0% | |
| GATTACCAACAGAATAGAAA+AGG | - | chr7_4:48754618-48754637 | None:intergenic | 30.0% | |
| !! | TTCTATTCTGTTGGTAATCT+AGG | + | chr7_4:48754619-48754638 | Msa1159160:intron | 30.0% |
| TTTATTCTCTGTTCATTTCG+TGG | + | chr7_4:48754709-48754728 | Msa1159160:CDS | 30.0% | |
| !!! | GAGTTAGCACATTAGTTTTA+TGG | + | chr7_4:48754783-48754802 | Msa1159160:intron | 30.0% |
| ACAGTTAATCTCTTTCTTCT+TGG | + | chr7_4:48754930-48754949 | Msa1159160:intron | 30.0% | |
| !! | AGCTTTGTTTAACAAGATTG+TGG | - | chr7_4:48755288-48755307 | None:intergenic | 30.0% |
| ! | ACTTTTGCAGAGATAAGTTA+GGG | + | chr7_4:48755321-48755340 | Msa1159160:intron | 30.0% |
| GCATCACTTTATGAAAGAAA+AGG | - | chr7_4:48755432-48755451 | None:intergenic | 30.0% | |
| TTCTTTCATAAAGTGATGCA+TGG | + | chr7_4:48755433-48755452 | Msa1159160:three_prime_UTR | 30.0% | |
| TAGTAGTGAAATCCAATAGA+GGG | + | chr7_4:48755509-48755528 | Msa1159160:three_prime_UTR | 30.0% | |
| ! | AATGGAGTTAATTTGAGCGA+AGG | - | chr7_4:48751048-48751067 | None:intergenic | 35.0% |
| ATTCAAGATCAAGAAGTGGT+GGG | + | chr7_4:48751065-48751084 | Msa1159160:CDS | 35.0% | |
| CCCACATAATACTACTTATC+TGG | + | chr7_4:48751104-48751123 | Msa1159160:CDS | 35.0% | |
| TCTGGGGAAGATTCTAATAA+AGG | - | chr7_4:48751132-48751151 | None:intergenic | 35.0% | |
| ! | TTCCCCAGAAACTTTTGTTA+CGG | + | chr7_4:48751143-48751162 | Msa1159160:CDS | 35.0% |
| ! | GAAAGGAATAGAGTACTTTC+AGG | + | chr7_4:48751195-48751214 | Msa1159160:CDS | 35.0% |
| ! | GTAGATAATGGCATTGTCAA+TGG | - | chr7_4:48751223-48751242 | None:intergenic | 35.0% |
| AAGATTGCGCAAGTAGATAA+TGG | - | chr7_4:48751235-48751254 | None:intergenic | 35.0% | |
| ATTCAGAAAAGAAATCGCCA+TGG | - | chr7_4:48751324-48751343 | None:intergenic | 35.0% | |
| AGAGAAGAATCATGGGAAAA+AGG | + | chr7_4:48751360-48751379 | Msa1159160:CDS | 35.0% | |
| TTAACTTTCTCAGTTCAGGA+AGG | + | chr7_4:48751397-48751416 | Msa1159160:CDS | 35.0% | |
| !! | TTTTTAGGAACAAATGGAGC+TGG | + | chr7_4:48751433-48751452 | Msa1159160:CDS | 35.0% |
| ACAACGCTTTCTATGTTATG+CGG | + | chr7_4:48751463-48751482 | Msa1159160:CDS | 35.0% | |
| ! | TTTTGGGCATGCTAATGTTT+TGG | + | chr7_4:48751496-48751515 | Msa1159160:intron | 35.0% |
| !!! | GATGGGACTGCTTTTATTTT+TGG | + | chr7_4:48751847-48751866 | Msa1159160:CDS | 35.0% |
| !! | ATTGGGCGTTTTTATTTGTG+GGG | - | chr7_4:48751936-48751955 | None:intergenic | 35.0% |
| !! | GATTGGGCGTTTTTATTTGT+GGG | - | chr7_4:48751937-48751956 | None:intergenic | 35.0% |
| !! | TGATTGGGCGTTTTTATTTG+TGG | - | chr7_4:48751938-48751957 | None:intergenic | 35.0% |
| ATTGTGGACAATATCCAATC+TGG | - | chr7_4:48752021-48752040 | None:intergenic | 35.0% | |
| ACATTGTCTATTGTGTAGTC+TGG | - | chr7_4:48752112-48752131 | None:intergenic | 35.0% | |
| ATGTATGTGTAAGAAGTTCC+TGG | + | chr7_4:48752128-48752147 | Msa1159160:intron | 35.0% | |
| AGATAAGCACTAAAGTAACC+AGG | - | chr7_4:48752149-48752168 | None:intergenic | 35.0% | |
| CTTTAGTGCTTATCTTCATC+AGG | + | chr7_4:48752154-48752173 | Msa1159160:intron | 35.0% | |
| CTAAATGATTACGTGTGGAA+AGG | + | chr7_4:48752288-48752307 | Msa1159160:intron | 35.0% | |
| ! | ATTGAAGTACCCTAGTCAAA+AGG | + | chr7_4:48752382-48752401 | Msa1159160:intron | 35.0% |
| TCAAAAGGAATTGTGGGTAA+GGG | + | chr7_4:48752397-48752416 | Msa1159160:intron | 35.0% | |
| ! | AATTTTCAGAGGTTCAGAAG+AGG | - | chr7_4:48752423-48752442 | None:intergenic | 35.0% |
| GTCATAACCAAATGTACATG+AGG | + | chr7_4:48752538-48752557 | Msa1159160:intron | 35.0% | |
| GGTTAATGAAGTGATGTTGA+TGG | + | chr7_4:48752659-48752678 | Msa1159160:intron | 35.0% | |
| !! | GGTTAATGAGTTTTGACACA+TGG | + | chr7_4:48752680-48752699 | Msa1159160:intron | 35.0% |
| ! | CATCATTTTCACTTAGTGGA+GGG | + | chr7_4:48752946-48752965 | Msa1159160:CDS | 35.0% |
| TCTGTTGCAATTGCAATGAT+TGG | + | chr7_4:48752984-48753003 | Msa1159160:CDS | 35.0% | |
| TCATCAAGAATGACAATAGG+AGG | - | chr7_4:48753014-48753033 | None:intergenic | 35.0% | |
| TTGACATAACTACCTGTTGA+CGG | - | chr7_4:48753038-48753057 | None:intergenic | 35.0% | |
| GTTGCCAATTCAGTAATTGT+CGG | + | chr7_4:48753268-48753287 | Msa1159160:intron | 35.0% | |
| TATGCCGACAATTACTGAAT+TGG | - | chr7_4:48753275-48753294 | None:intergenic | 35.0% | |
| CAACTCACTAAACCAAAACA+AGG | - | chr7_4:48753362-48753381 | None:intergenic | 35.0% | |
| ! | CACATGAACCTTTTTGCAAT+GGG | - | chr7_4:48753544-48753563 | None:intergenic | 35.0% |
| CATTGCAAAAAGGTTCATGT+GGG | + | chr7_4:48753543-48753562 | Msa1159160:CDS | 35.0% | |
| TTGTACCATAATCCCTATTC+TGG | - | chr7_4:48753656-48753675 | None:intergenic | 35.0% | |
| !!! | ATTTGAAGGTGCTTTTGTCA+GGG | - | chr7_4:48753894-48753913 | None:intergenic | 35.0% |
| !!! | TATTTGAAGGTGCTTTTGTC+AGG | - | chr7_4:48753895-48753914 | None:intergenic | 35.0% |
| AGGTCATTAAGTAAGCTTCT+AGG | - | chr7_4:48754029-48754048 | None:intergenic | 35.0% | |
| TGACCTTGAAATTTGCATTG+GGG | + | chr7_4:48754043-48754062 | Msa1159160:CDS | 35.0% | |
| TGTCAAGCTAATTTCTGCAA+TGG | - | chr7_4:48754099-48754118 | None:intergenic | 35.0% | |
| TCAGAGATGATAGGCTTAAT+TGG | + | chr7_4:48754119-48754138 | Msa1159160:CDS | 35.0% | |
| ACCATCTCGAAGTAATTGTT+CGG | - | chr7_4:48754228-48754247 | None:intergenic | 35.0% | |
| TACCAACAGAATAGAAAAGG+GGG | - | chr7_4:48754615-48754634 | None:intergenic | 35.0% | |
| !! | TATTCTGTTGGTAATCTAGG+TGG | + | chr7_4:48754622-48754641 | Msa1159160:intron | 35.0% |
| GGTAAATTCCACATTATGGT+TGG | + | chr7_4:48754804-48754823 | Msa1159160:intron | 35.0% | |
| TTACATTGTAGCCGATGAAA+AGG | - | chr7_4:48754965-48754984 | None:intergenic | 35.0% | |
| CATACAGCGTATAATGTATC+TGG | + | chr7_4:48755121-48755140 | Msa1159160:intron | 35.0% | |
| CTAACTTATCTCTGCAAAAG+TGG | - | chr7_4:48755322-48755341 | None:intergenic | 35.0% | |
| ! | CACTTTTGCAGAGATAAGTT+AGG | + | chr7_4:48755320-48755339 | Msa1159160:intron | 35.0% |
| ! | ATATTGTCTCCAGAGTTGAT+TGG | - | chr7_4:48755367-48755386 | None:intergenic | 35.0% |
| CTCATGAATTAGCTGCAAAA+TGG | - | chr7_4:48755394-48755413 | None:intergenic | 35.0% | |
| TTTCATAAAGTGATGCATGG+TGG | + | chr7_4:48755436-48755455 | Msa1159160:three_prime_UTR | 35.0% | |
| CTAGTAGTGAAATCCAATAG+AGG | + | chr7_4:48755508-48755527 | Msa1159160:three_prime_UTR | 35.0% | |
| CTCCATTCAAGATCAAGAAG+TGG | + | chr7_4:48751061-48751080 | Msa1159160:CDS | 40.0% | |
| CACCACTTCTTGATCTTGAA+TGG | - | chr7_4:48751066-48751085 | None:intergenic | 40.0% | |
| CATTCAAGATCAAGAAGTGG+TGG | + | chr7_4:48751064-48751083 | Msa1159160:CDS | 40.0% | |
| TTCAAGATCAAGAAGTGGTG+GGG | + | chr7_4:48751066-48751085 | Msa1159160:CDS | 40.0% | |
| GTCCGTAACAAAAGTTTCTG+GGG | - | chr7_4:48751148-48751167 | None:intergenic | 40.0% | |
| GGTCCGTAACAAAAGTTTCT+GGG | - | chr7_4:48751149-48751168 | None:intergenic | 40.0% | |
| AGGTCCGTAACAAAAGTTTC+TGG | - | chr7_4:48751150-48751169 | None:intergenic | 40.0% | |
| GAATCATGGGAAAAAGGTTG+CGG | + | chr7_4:48751366-48751385 | Msa1159160:CDS | 40.0% | |
| ! | GTTCAGGAAGGAGAATGTTT+TGG | + | chr7_4:48751409-48751428 | Msa1159160:CDS | 40.0% |
| !! | GCATAACATAGAAAGCGTTG+TGG | - | chr7_4:48751464-48751483 | None:intergenic | 40.0% |
| AAAGCAAAGGCAGTGAGTTA+TGG | + | chr7_4:48751663-48751682 | Msa1159160:intron | 40.0% | |
| AGGCAGTGAGTTATGGAATT+AGG | + | chr7_4:48751670-48751689 | Msa1159160:intron | 40.0% | |
| ACCTTTCTCTCTGCTTCTTA+TGG | + | chr7_4:48751769-48751788 | Msa1159160:intron | 40.0% | |
| CCTTTCTCTCTGCTTCTTAT+GGG | + | chr7_4:48751770-48751789 | Msa1159160:intron | 40.0% | |
| CTTTCTCTCTGCTTCTTATG+GGG | + | chr7_4:48751771-48751790 | Msa1159160:intron | 40.0% | |
| ATAAAAGCAGTCCCATCAGA+AGG | - | chr7_4:48751844-48751863 | None:intergenic | 40.0% | |
| ACATATTTACGAGCAGCCTT+GGG | - | chr7_4:48751892-48751911 | None:intergenic | 40.0% | |
| TACATATTTACGAGCAGCCT+TGG | - | chr7_4:48751893-48751912 | None:intergenic | 40.0% | |
| !! | TTGGGCGTTTTTATTTGTGG+GGG | - | chr7_4:48751935-48751954 | None:intergenic | 40.0% |
| !! | AGTAAGAGCCTGATGGATTT+AGG | - | chr7_4:48751976-48751995 | None:intergenic | 40.0% |
| !! | CTTGATTTGCACTTCCAGAT+TGG | + | chr7_4:48752004-48752023 | Msa1159160:intron | 40.0% |
| TCCACAATTTGATGCTCTGT+TGG | + | chr7_4:48752033-48752052 | Msa1159160:CDS | 40.0% | |
| ! | TCCAACAGAGCATCAAATTG+TGG | - | chr7_4:48752037-48752056 | None:intergenic | 40.0% |
| ! | TATGCCGTTCTTTTGTGCAT+GGG | + | chr7_4:48752189-48752208 | Msa1159160:intron | 40.0% |
| CTATCCCATGCACAAAAGAA+CGG | - | chr7_4:48752196-48752215 | None:intergenic | 40.0% | |
| GTGAGCTAAATGATTACGTG+TGG | + | chr7_4:48752283-48752302 | Msa1159160:intron | 40.0% | |
| ACCCTAGTCAAAAGGAATTG+TGG | + | chr7_4:48752390-48752409 | Msa1159160:intron | 40.0% | |
| !! | CCCACAATTCCTTTTGACTA+GGG | - | chr7_4:48752394-48752413 | None:intergenic | 40.0% |
| CCCTAGTCAAAAGGAATTGT+GGG | + | chr7_4:48752391-48752410 | Msa1159160:intron | 40.0% | |
| !! | ACCCACAATTCCTTTTGACT+AGG | - | chr7_4:48752395-48752414 | None:intergenic | 40.0% |
| GTCAAAAGGAATTGTGGGTA+AGG | + | chr7_4:48752396-48752415 | Msa1159160:intron | 40.0% | |
| AAACATCACATGATGCTGAC+AGG | + | chr7_4:48752464-48752483 | Msa1159160:intron | 40.0% | |
| ! | TGACCTTTTGGTGAAGAGAT+CGG | - | chr7_4:48752506-48752525 | None:intergenic | 40.0% |
| GTGGTTAACACAGTTCAAGT+AGG | - | chr7_4:48752742-48752761 | None:intergenic | 40.0% | |
| ACAGGTTGTTATGGAAAAGC+TGG | + | chr7_4:48752890-48752909 | Msa1159160:intron | 40.0% | |
| CCTCCACTAAGTGAAAATGA+TGG | - | chr7_4:48752948-48752967 | None:intergenic | 40.0% | |
| ! | CCATCATTTTCACTTAGTGG+AGG | + | chr7_4:48752945-48752964 | Msa1159160:CDS | 40.0% |
| GGCTCATCAAGAATGACAAT+AGG | - | chr7_4:48753017-48753036 | None:intergenic | 40.0% | |
| ! | CTGGGTTTTCATCACATGTA+AGG | - | chr7_4:48753179-48753198 | None:intergenic | 40.0% |
| ! | TTTTATGCTTCCCTCAGGAA+TGG | + | chr7_4:48753516-48753535 | Msa1159160:intron | 40.0% |
| GAATGGATCCCATTGCAAAA+AGG | + | chr7_4:48753533-48753552 | Msa1159160:CDS | 40.0% | |
| ! | CCACATGAACCTTTTTGCAA+TGG | - | chr7_4:48753545-48753564 | None:intergenic | 40.0% |
| CCATTGCAAAAAGGTTCATG+TGG | + | chr7_4:48753542-48753561 | Msa1159160:CDS | 40.0% | |
| ! | TCTAGAATCTCAACTAGACG+AGG | + | chr7_4:48753574-48753593 | Msa1159160:CDS | 40.0% |
| ! | TGGCAATCATCTAGAACTAG+AGG | + | chr7_4:48753815-48753834 | Msa1159160:CDS | 40.0% |
| ! | GCTTTTGTCAGGGAAAAACA+AGG | - | chr7_4:48753884-48753903 | None:intergenic | 40.0% |
| !! | TTCTTAGTTTCGGTGTTTCC+AGG | + | chr7_4:48753920-48753939 | Msa1159160:intron | 40.0% |
| ! | TCACTTCAGTAGGTTTTACC+TGG | - | chr7_4:48753941-48753960 | None:intergenic | 40.0% |
| AACACTCTGCCAAACTATTC+AGG | + | chr7_4:48753977-48753996 | Msa1159160:CDS | 40.0% | |
| ! | GTAAGCTTCTAGGTTGAGAA+GGG | - | chr7_4:48754019-48754038 | None:intergenic | 40.0% |
| ! | AGTAAGCTTCTAGGTTGAGA+AGG | - | chr7_4:48754020-48754039 | None:intergenic | 40.0% |
| GACCTTGAAATTTGCATTGG+GGG | + | chr7_4:48754044-48754063 | Msa1159160:CDS | 40.0% | |
| CAAGCTAATTTCTGCAATGG+AGG | - | chr7_4:48754096-48754115 | None:intergenic | 40.0% | |
| AGCTTGACATCAGAGATGAT+AGG | + | chr7_4:48754110-48754129 | Msa1159160:CDS | 40.0% | |
| TCCGAACAATTACTTCGAGA+TGG | + | chr7_4:48754224-48754243 | Msa1159160:CDS | 40.0% | |
| ! | TTCCCCCTTTTCTATTCTGT+TGG | + | chr7_4:48754610-48754629 | Msa1159160:intron | 40.0% |
| TGCTTAAACCATTGTATCCC+TGG | - | chr7_4:48754744-48754763 | None:intergenic | 40.0% | |
| TGGTTTAAGCATCAGATACC+AGG | + | chr7_4:48754753-48754772 | Msa1159160:CDS | 40.0% | |
| !! | TGTGCTAACTCAAAAGTACC+TGG | - | chr7_4:48754774-48754793 | None:intergenic | 40.0% |
| ACGACTTTCCAACCATAATG+TGG | - | chr7_4:48754815-48754834 | None:intergenic | 40.0% | |
| ! | GGTTCTTCTCTCCTTTTCAT+CGG | + | chr7_4:48754951-48754970 | Msa1159160:intron | 40.0% |
| TGAACGAAGTGTGTAGATTG+AGG | - | chr7_4:48754994-48755013 | None:intergenic | 40.0% | |
| !! | TAAGAGTGATTTGGTCCCAA+CGG | - | chr7_4:48755017-48755036 | None:intergenic | 40.0% |
| GACCAAATCACTCTTAGAGT+TGG | + | chr7_4:48755021-48755040 | Msa1159160:intron | 40.0% | |
| ! | TTTTCCCTGGCAGATGTTTT+TGG | + | chr7_4:48755210-48755229 | Msa1159160:CDS | 40.0% |
| AAGTCCAAAAACATCTGCCA+GGG | - | chr7_4:48755217-48755236 | None:intergenic | 40.0% | |
| ! | GACGGACTCTACAATATACA+AGG | - | chr7_4:48755555-48755574 | None:intergenic | 40.0% |
| GACAGCAAGATAACAGATGG+AGG | - | chr7_4:48750777-48750796 | None:intergenic | 45.0% | |
| CTCGACAGCAAGATAACAGA+TGG | - | chr7_4:48750780-48750799 | None:intergenic | 45.0% | |
| ! | CATCTGTTATCTTGCTGTCG+AGG | + | chr7_4:48750778-48750797 | Msa1159160:CDS | 45.0% |
| TCAAGATCAAGAAGTGGTGG+GGG | + | chr7_4:48751067-48751086 | Msa1159160:CDS | 45.0% | |
| TCACATCCACGTCTTCATTG+AGG | - | chr7_4:48751170-48751189 | None:intergenic | 45.0% | |
| ACGTGGATGTGAAAGCAGAA+AGG | + | chr7_4:48751178-48751197 | Msa1159160:CDS | 45.0% | |
| ! | ATCTTCGCAAGGTATTTCCC+AGG | + | chr7_4:48751250-48751269 | Msa1159160:intron | 45.0% |
| CCCATAAGAAGCAGAGAGAA+AGG | - | chr7_4:48751773-48751792 | None:intergenic | 45.0% | |
| GGGAAGAATCTCCTTCTGAT+GGG | + | chr7_4:48751830-48751849 | Msa1159160:CDS | 45.0% | |
| AGACATATGTTCCCATCCCA+AGG | + | chr7_4:48751873-48751892 | Msa1159160:CDS | 45.0% | |
| !! | TGGGCGTTTTTATTTGTGGG+GGG | - | chr7_4:48751934-48751953 | None:intergenic | 45.0% |
| CATGCACAAAAGAACGGCAT+AGG | - | chr7_4:48752190-48752209 | None:intergenic | 45.0% | |
| ! | CTATGCCGTTCTTTTGTGCA+TGG | + | chr7_4:48752188-48752207 | Msa1159160:intron | 45.0% |
| CATCCGATCTCTTCACCAAA+AGG | + | chr7_4:48752500-48752519 | Msa1159160:intron | 45.0% | |
| TCGTAGGCCTCATGTACATT+TGG | - | chr7_4:48752548-48752567 | None:intergenic | 45.0% | |
| GGTTGTTATGGAAAAGCTGG+TGG | + | chr7_4:48752893-48752912 | Msa1159160:intron | 45.0% | |
| ATTCTTGATGAGCCGTCAAC+AGG | + | chr7_4:48753023-48753042 | Msa1159160:CDS | 45.0% | |
| TTACTGAATCCTAGACCGCT+TGG | - | chr7_4:48753206-48753225 | None:intergenic | 45.0% | |
| !! | TTGAAGGGGCATCCAGTTAT+CGG | + | chr7_4:48753336-48753355 | Msa1159160:intron | 45.0% |
| !!! | TCCAGTTATCGGCCTTGTTT+TGG | + | chr7_4:48753347-48753366 | Msa1159160:intron | 45.0% |
| ACCAAAACAAGGCCGATAAC+TGG | - | chr7_4:48753351-48753370 | None:intergenic | 45.0% | |
| ! | ATGAGAGGTCCAGCTACTTT+GGG | - | chr7_4:48753388-48753407 | None:intergenic | 45.0% |
| AATGAGAGGTCCAGCTACTT+TGG | - | chr7_4:48753389-48753408 | None:intergenic | 45.0% | |
| ! | AAGCCTTGTGCACCAGAATA+GGG | + | chr7_4:48753641-48753660 | Msa1159160:CDS | 45.0% |
| AATCCCTATTCTGGTGCACA+AGG | - | chr7_4:48753647-48753666 | None:intergenic | 45.0% | |
| GTGCACCAGAATAGGGATTA+TGG | + | chr7_4:48753648-48753667 | Msa1159160:CDS | 45.0% | |
| GGTGGACAACTAAGATGCAT+TGG | + | chr7_4:48753765-48753784 | Msa1159160:CDS | 45.0% | |
| CACCCCCAATGCAAATTTCA+AGG | - | chr7_4:48754049-48754068 | None:intergenic | 45.0% | |
| !! | TGCAATGGAGGTATTTCCTG+AGG | - | chr7_4:48754084-48754103 | None:intergenic | 45.0% |
| TGCTGTACACCTGTCTATGA+TGG | + | chr7_4:48754182-48754201 | Msa1159160:CDS | 45.0% | |
| GCTGTACACCTGTCTATGAT+GGG | + | chr7_4:48754183-48754202 | Msa1159160:CDS | 45.0% | |
| CTGTACACCTGTCTATGATG+GGG | + | chr7_4:48754184-48754203 | Msa1159160:CDS | 45.0% | |
| TTCGGATAACTGTTCCTGAG+AGG | - | chr7_4:48754210-48754229 | None:intergenic | 45.0% | |
| TCAAACGCTAACAGCTCTCT+GGG | - | chr7_4:48754530-48754549 | None:intergenic | 45.0% | |
| ATCAAACGCTAACAGCTCTC+TGG | - | chr7_4:48754531-48754550 | None:intergenic | 45.0% | |
| AACCACCACTCAGAAAACAC+GGG | - | chr7_4:48754658-48754677 | None:intergenic | 45.0% | |
| CAACCACCACTCAGAAAACA+CGG | - | chr7_4:48754659-48754678 | None:intergenic | 45.0% | |
| TACACACTTCGTTCACCGTT+GGG | + | chr7_4:48754999-48755018 | Msa1159160:intron | 45.0% | |
| ! | GGCCAACTCTAAGAGTGATT+TGG | - | chr7_4:48755026-48755045 | None:intergenic | 45.0% |
| AGTTGGTCGATGTTCTTCCA+AGG | + | chr7_4:48755076-48755095 | Msa1159160:intron | 45.0% | |
| GTTGGTCGATGTTCTTCCAA+GGG | + | chr7_4:48755077-48755096 | Msa1159160:intron | 45.0% | |
| TCCTCATCACAAGGTAACTG+CGG | - | chr7_4:48755189-48755208 | None:intergenic | 45.0% | |
| AGGGAAAAGTCCTCATCACA+AGG | - | chr7_4:48755198-48755217 | None:intergenic | 45.0% | |
| ! | TTGTGATGAGGACTTTTCCC+TGG | + | chr7_4:48755197-48755216 | Msa1159160:CDS | 45.0% |
| GAAGTCCAAAAACATCTGCC+AGG | - | chr7_4:48755218-48755237 | None:intergenic | 45.0% | |
| !!! | GGCAGATGTTTTTGGACTTC+TGG | + | chr7_4:48755218-48755237 | Msa1159160:CDS | 45.0% |
| AGGCCTTAGAATCTCACCTA+GGG | - | chr7_4:48755535-48755554 | None:intergenic | 45.0% | |
| AAGGCCTTAGAATCTCACCT+AGG | - | chr7_4:48755536-48755555 | None:intergenic | 45.0% | |
| TACGGACCTCAATGAAGACG+TGG | + | chr7_4:48751161-48751180 | Msa1159160:CDS | 50.0% | |
| CTACTTGCGCAATCTTCGCA+AGG | + | chr7_4:48751239-48751258 | Msa1159160:CDS | 50.0% | |
| !!! | GGGCATGCTAATGTTTTGGC+TGG | + | chr7_4:48751500-48751519 | Msa1159160:intron | 50.0% |
| GGGGAAGAATCTCCTTCTGA+TGG | + | chr7_4:48751829-48751848 | Msa1159160:intron | 50.0% | |
| TTTACGAGCAGCCTTGGGAT+GGG | - | chr7_4:48751887-48751906 | None:intergenic | 50.0% | |
| ATTTACGAGCAGCCTTGGGA+TGG | - | chr7_4:48751888-48751907 | None:intergenic | 50.0% | |
| !! | GGGCGTTTTTATTTGTGGGG+GGG | - | chr7_4:48751933-48751952 | None:intergenic | 50.0% |
| TGAAAACCCAGCTCACCAAG+CGG | + | chr7_4:48753188-48753207 | Msa1159160:intron | 50.0% | |
| GCAATGGGATCCATTCCTGA+GGG | - | chr7_4:48753529-48753548 | None:intergenic | 50.0% | |
| TGCAATGGGATCCATTCCTG+AGG | - | chr7_4:48753530-48753549 | None:intergenic | 50.0% | |
| ! | CAAGCCTTGTGCACCAGAAT+AGG | + | chr7_4:48753640-48753659 | Msa1159160:CDS | 50.0% |
| ACCTACTGAAGTGAGCTCTG+TGG | + | chr7_4:48753947-48753966 | Msa1159160:CDS | 50.0% | |
| TCCACAGAGCTCACTTCAGT+AGG | - | chr7_4:48753951-48753970 | None:intergenic | 50.0% | |
| !! | GGAGGTATTTCCTGAGGTGA+CGG | - | chr7_4:48754078-48754097 | None:intergenic | 50.0% |
| GGCTTAATTGGACGCTTGCT+TGG | + | chr7_4:48754131-48754150 | Msa1159160:CDS | 50.0% | |
| AAACGCTAACAGCTCTCTGG+GGG | - | chr7_4:48754528-48754547 | None:intergenic | 50.0% | |
| CAAACGCTAACAGCTCTCTG+GGG | - | chr7_4:48754529-48754548 | None:intergenic | 50.0% | |
| CACTCAGAAAACACGGGCAA+CGG | - | chr7_4:48754652-48754671 | None:intergenic | 50.0% | |
| ATTTCGTGGAGCAAGATGCC+AGG | + | chr7_4:48754723-48754742 | Msa1159160:CDS | 50.0% | |
| TTTCGTGGAGCAAGATGCCA+GGG | + | chr7_4:48754724-48754743 | Msa1159160:CDS | 50.0% | |
| GCAAGATGCCAGGGATACAA+TGG | + | chr7_4:48754733-48754752 | Msa1159160:CDS | 50.0% | |
| CTACACACTTCGTTCACCGT+TGG | + | chr7_4:48754998-48755017 | Msa1159160:intron | 50.0% | |
| ACACATGCATGTTCTGCCCT+TGG | - | chr7_4:48755096-48755115 | None:intergenic | 50.0% | |
| ! | TTGGACTTCTGGAAGCAAGC+AGG | + | chr7_4:48755229-48755248 | Msa1159160:CDS | 50.0% |
| ! | TCTCCAGAGTTGATTGGCTG+AGG | - | chr7_4:48755361-48755380 | None:intergenic | 50.0% |
| GAAATCCAATAGAGGGCCCT+AGG | + | chr7_4:48755516-48755535 | Msa1159160:three_prime_UTR | 50.0% | |
| GAGTTGCGACCCAAAGTAGC+TGG | + | chr7_4:48753376-48753395 | Msa1159160:intron | 55.0% | |
| TGAGAGGCCCCATCATAGAC+AGG | - | chr7_4:48754194-48754213 | None:intergenic | 55.0% | |
| ! | TGTCTATGATGGGGCCTCTC+AGG | + | chr7_4:48754193-48754212 | Msa1159160:CDS | 55.0% |
| TGGGGGGAGGGATGTCTATA+TGG | - | chr7_4:48754511-48754530 | None:intergenic | 55.0% | |
| AACGCTAACAGCTCTCTGGG+GGG | - | chr7_4:48754527-48754546 | None:intergenic | 55.0% | |
| ! | CGTTGCCCGTGTTTTCTGAG+TGG | + | chr7_4:48754650-48754669 | Msa1159160:CDS | 55.0% |
| ! | TGCCCGTGTTTTCTGAGTGG+TGG | + | chr7_4:48754653-48754672 | Msa1159160:CDS | 55.0% |
| GCCGCAGTTACCTTGTGATG+AGG | + | chr7_4:48755185-48755204 | Msa1159160:intron | 55.0% | |
| CAGCCTCAGCCAATCAACTC+TGG | + | chr7_4:48755355-48755374 | Msa1159160:CDS | 55.0% | |
| TCTCACCTAGGGCCCTCTAT+TGG | - | chr7_4:48755524-48755543 | None:intergenic | 55.0% | |
| GGGCCCTAGGTGAGATTCTA+AGG | + | chr7_4:48755529-48755548 | Msa1159160:three_prime_UTR | 55.0% | |
| ! | CCTAGACCGCTTGGTGAGCT+GGG | - | chr7_4:48753197-48753216 | None:intergenic | 60.0% |
| ! | TCCTAGACCGCTTGGTGAGC+TGG | - | chr7_4:48753198-48753217 | None:intergenic | 60.0% |
| !! | GGTGCTGATTCCGTCACCTC+AGG | + | chr7_4:48754065-48754084 | Msa1159160:CDS | 60.0% |
| ! | CTAACAGCTCTCTGGGGGGA+GGG | - | chr7_4:48754523-48754542 | None:intergenic | 60.0% |
| CCCAGCTCACCAAGCGGTCT+AGG | + | chr7_4:48753194-48753213 | Msa1159160:intron | 65.0% | |
| ! | GCTAACAGCTCTCTGGGGGG+AGG | - | chr7_4:48754524-48754543 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 48750770 | 48755636 | 48750770 | ID=Msa1159160;Name=Msa1159160 |
| chr7_4 | mRNA | 48750770 | 48755636 | 48750770 | ID=Msa1159160-mRNA-1;Parent=Msa1159160;Name=Msa1159160-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|1|0.91|1|0.90|0.83|12|224|517 |
| chr7_4 | exon | 48750770 | 48750799 | 48750770 | ID=Msa1159160-mRNA-1:exon:13207;Parent=Msa1159160-mRNA-1 |
| chr7_4 | exon | 48751003 | 48751260 | 48751003 | ID=Msa1159160-mRNA-1:exon:13208;Parent=Msa1159160-mRNA-1 |
| chr7_4 | exon | 48751349 | 48751484 | 48751349 | ID=Msa1159160-mRNA-1:exon:13209;Parent=Msa1159160-mRNA-1 |
| chr7_4 | exon | 48751830 | 48751909 | 48751830 | ID=Msa1159160-mRNA-1:exon:13210;Parent=Msa1159160-mRNA-1 |
| chr7_4 | exon | 48752022 | 48752129 | 48752022 | ID=Msa1159160-mRNA-1:exon:13211;Parent=Msa1159160-mRNA-1 |
| chr7_4 | exon | 48752894 | 48753044 | 48752894 | ID=Msa1159160-mRNA-1:exon:13212;Parent=Msa1159160-mRNA-1 |
| chr7_4 | exon | 48753533 | 48753669 | 48753533 | ID=Msa1159160-mRNA-1:exon:13213;Parent=Msa1159160-mRNA-1 |
| chr7_4 | exon | 48753762 | 48753836 | 48753762 | ID=Msa1159160-mRNA-1:exon:13214;Parent=Msa1159160-mRNA-1 |
| chr7_4 | exon | 48753942 | 48754245 | 48753942 | ID=Msa1159160-mRNA-1:exon:13215;Parent=Msa1159160-mRNA-1 |
| chr7_4 | exon | 48754641 | 48754774 | 48754641 | ID=Msa1159160-mRNA-1:exon:13216;Parent=Msa1159160-mRNA-1 |
| chr7_4 | exon | 48755192 | 48755250 | 48755192 | ID=Msa1159160-mRNA-1:exon:13217;Parent=Msa1159160-mRNA-1 |
| chr7_4 | exon | 48755331 | 48755636 | 48755331 | ID=Msa1159160-mRNA-1:exon:13218;Parent=Msa1159160-mRNA-1 |
| chr7_4 | CDS | 48750770 | 48750799 | 48750770 | ID=Msa1159160-mRNA-1:cds;Parent=Msa1159160-mRNA-1 |
| chr7_4 | CDS | 48751003 | 48751260 | 48751003 | ID=Msa1159160-mRNA-1:cds;Parent=Msa1159160-mRNA-1 |
| chr7_4 | CDS | 48751349 | 48751484 | 48751349 | ID=Msa1159160-mRNA-1:cds;Parent=Msa1159160-mRNA-1 |
| chr7_4 | CDS | 48751830 | 48751909 | 48751830 | ID=Msa1159160-mRNA-1:cds;Parent=Msa1159160-mRNA-1 |
| chr7_4 | CDS | 48752022 | 48752129 | 48752022 | ID=Msa1159160-mRNA-1:cds;Parent=Msa1159160-mRNA-1 |
| chr7_4 | CDS | 48752894 | 48753044 | 48752894 | ID=Msa1159160-mRNA-1:cds;Parent=Msa1159160-mRNA-1 |
| chr7_4 | CDS | 48753533 | 48753669 | 48753533 | ID=Msa1159160-mRNA-1:cds;Parent=Msa1159160-mRNA-1 |
| chr7_4 | CDS | 48753762 | 48753836 | 48753762 | ID=Msa1159160-mRNA-1:cds;Parent=Msa1159160-mRNA-1 |
| chr7_4 | CDS | 48753942 | 48754245 | 48753942 | ID=Msa1159160-mRNA-1:cds;Parent=Msa1159160-mRNA-1 |
| chr7_4 | CDS | 48754641 | 48754774 | 48754641 | ID=Msa1159160-mRNA-1:cds;Parent=Msa1159160-mRNA-1 |
| chr7_4 | CDS | 48755192 | 48755250 | 48755192 | ID=Msa1159160-mRNA-1:cds;Parent=Msa1159160-mRNA-1 |
| chr7_4 | CDS | 48755331 | 48755412 | 48755331 | ID=Msa1159160-mRNA-1:cds;Parent=Msa1159160-mRNA-1 |
| chr7_4 | three_prime_UTR | 48755413 | 48755636 | 48755413 | ID=Msa1159160-mRNA-1:three_prime_utr;Parent=Msa1159160-mRNA-1 |
| Gene Sequence |
| Protein sequence |
