Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0437270 | XP_003600872.1 | 96.975 | 628 | 15 | 2 | 1 | 626 | 1 | 626 | 0.0 | 1253 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0437270 | sp|Q9ZT48|ATE1_ARATH | 52.000 | 650 | 260 | 11 | 6 | 625 | 4 | 631 | 0.0 | 624 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0437270 | G7JB71 | 96.975 | 628 | 15 | 2 | 1 | 626 | 1 | 626 | 0.0 | 1253 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0076290 | Msa0437270 | 0.825326 | 4.982739e-54 | -8.615850e-47 |
| Msa0237300 | Msa0437270 | 0.805282 | 1.439476e-49 | -8.615850e-47 |
| Msa0372000 | Msa0437270 | 0.945000 | 6.913029e-104 | -8.615850e-47 |
| Msa0416510 | Msa0437270 | 0.927348 | 1.331714e-91 | -8.615850e-47 |
| Msa0437270 | Msa0556230 | -0.818268 | 2.141941e-52 | -8.615850e-47 |
| Msa0437270 | Msa0673120 | 0.823720 | 1.189787e-53 | -8.615850e-47 |
| Msa0437270 | Msa0689250 | 0.808042 | 3.760636e-50 | -8.615850e-47 |
| Msa0437270 | Msa0858390 | 0.803701 | 3.074840e-49 | -8.615850e-47 |
| Msa0437270 | Msa0878220 | 0.808484 | 3.027135e-50 | -8.615850e-47 |
| Msa0437270 | Msa1159160 | 0.820849 | 5.520150e-53 | -8.615850e-47 |
| Msa0437270 | Msa1214750 | 0.810586 | 1.070652e-50 | -8.615850e-47 |
| Msa0437270 | Msa1217420 | 0.814710 | 1.341240e-51 | -8.615850e-47 |
| Msa0437270 | Msa1236440 | 0.829101 | 6.215919e-55 | -8.615850e-47 |
| Msa0437270 | Msa1277670 | 0.838555 | 2.682162e-57 | -8.615850e-47 |
| Msa0437270 | Msa1340200 | 0.823288 | 1.501727e-53 | -8.615850e-47 |
| Msa0437270 | Msa1341300 | 0.804289 | 2.319997e-49 | -8.615850e-47 |
| Msa0437270 | Msa1363820 | -0.841648 | 4.182021e-58 | -8.615850e-47 |
| Msa0437270 | Msa1452710 | 0.809589 | 1.756047e-50 | -8.615850e-47 |
| Msa0437270 | Msa1464090 | 0.819434 | 1.163957e-52 | -8.615850e-47 |
| Msa0274980 | Msa0437270 | 0.803440 | 3.482102e-49 | -8.615850e-47 |
| Msa0315690 | Msa0437270 | 0.811619 | 6.393947e-51 | -8.615850e-47 |
| Msa0349470 | Msa0437270 | 0.981244 | 4.038913e-152 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0437270 | MtrunA17_Chr3g0113281 | 96.975 | 628 | 15 | 2 | 1 | 626 | 1 | 626 | 0.0 | 1253 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0437270 | AT5G05700.1 | 52.000 | 650 | 260 | 11 | 6 | 625 | 4 | 631 | 0.0 | 624 |
| Msa0437270 | AT3G11240.1 | 51.962 | 637 | 261 | 11 | 1 | 625 | 1 | 604 | 0.0 | 603 |
| Msa0437270 | AT3G11240.3 | 51.613 | 589 | 245 | 9 | 44 | 625 | 6 | 561 | 0.0 | 558 |
| Msa0437270 | AT5G05700.2 | 50.692 | 578 | 236 | 10 | 75 | 625 | 1 | 556 | 0.0 | 530 |
| Msa0437270 | AT3G11240.4 | 50.855 | 468 | 198 | 7 | 164 | 625 | 4 | 445 | 1.36e-149 | 440 |
| Msa0437270 | AT3G11240.2 | 50.855 | 468 | 198 | 7 | 164 | 625 | 4 | 445 | 1.36e-149 | 440 |
| Msa0437270 | AT3G11240.5 | 50.855 | 468 | 198 | 7 | 164 | 625 | 4 | 445 | 1.36e-149 | 440 |
Find 159 sgRNAs with CRISPR-Local
Find 401 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTGAATTGTTTGAAGTATT+TGG | 0.169517 | 3_2:+91455909 | None:intergenic |
| GATTCAACAGTGAACATTTC+TGG | 0.176607 | 3_2:-91455492 | Msa0437270:CDS |
| TACTCTGCTCTTCAAGAAAT+TGG | 0.199151 | 3_2:-91455012 | Msa0437270:CDS |
| TTCTTGTGCATTTGCATATA+CGG | 0.212102 | 3_2:-91453425 | Msa0437270:three_prime_UTR |
| ACTCGACATTCTTCAATTTC+GGG | 0.215652 | 3_2:+91459124 | None:intergenic |
| CCAGCATTAGTTGCTGAATA+TGG | 0.218419 | 3_2:-91453374 | Msa0437270:three_prime_UTR |
| TTCAGAAGAGATGAAAATTT+AGG | 0.221231 | 3_2:+91459147 | None:intergenic |
| ATATACGGAATTTAATTTAA+TGG | 0.222822 | 3_2:-91453410 | Msa0437270:three_prime_UTR |
| CTATATAAAGCATATTCTTC+TGG | 0.228134 | 3_2:+91455300 | None:intergenic |
| TACTCGACATTCTTCAATTT+CGG | 0.228850 | 3_2:+91459123 | None:intergenic |
| CGATTCGTTGCAGACTTCTT+TGG | 0.247968 | 3_2:+91455378 | None:intergenic |
| TCCTTCTCACTATCTCTTGA+TGG | 0.258555 | 3_2:+91455564 | None:intergenic |
| ACAGTTCCTCCTTGTGGTTT+TGG | 0.260938 | 3_2:-91455165 | Msa0437270:CDS |
| TATCGAGTAAATATTTGTTC+TGG | 0.263562 | 3_2:-91455068 | Msa0437270:CDS |
| CAGCAACAACGCTTTCCTTT+GGG | 0.269424 | 3_2:+91459069 | None:intergenic |
| TTTGAAGTAGTTTCTATATC+AGG | 0.274161 | 3_2:+91454300 | None:intergenic |
| ACATTTCTGGTCTGTCTATC+AGG | 0.275790 | 3_2:-91455479 | Msa0437270:CDS |
| TCAGAAGAGATGAAAATTTA+GGG | 0.303811 | 3_2:+91459148 | None:intergenic |
| AAGTGACTTTGTTCCCTCTA+AGG | 0.312760 | 3_2:-91457164 | Msa0437270:CDS |
| TCAAATGGTGAACCAGAAAA+TGG | 0.316117 | 3_2:-91454282 | Msa0437270:CDS |
| GGGATTGTTCGATCTTTGAT+TGG | 0.329373 | 3_2:+91459168 | None:intergenic |
| GTATGTGAAACATATATTAA+TGG | 0.338861 | 3_2:+91455198 | None:intergenic |
| AAGGATCTGCAAAGTGTATT+TGG | 0.341290 | 3_2:-91453739 | Msa0437270:CDS |
| TTTCCATCAACAGTATTTAG+TGG | 0.347193 | 3_2:-91455139 | Msa0437270:CDS |
| TCGGACTTAAATATTGATAT+AGG | 0.347773 | 3_2:+91459336 | None:intergenic |
| ACCATTCTGACTGAAGCTTT+TGG | 0.357966 | 3_2:+91455717 | None:intergenic |
| CCTTGTCCCTTGACTTTGCT+CGG | 0.359889 | 3_2:+91455604 | None:intergenic |
| TCAGCAACAACGCTTTCCTT+TGG | 0.361381 | 3_2:+91459068 | None:intergenic |
| TTCTGTTAGCTCTTCTTGAT+CGG | 0.362879 | 3_2:-91457270 | Msa0437270:intron |
| CATCCACTAAATACTGTTGA+TGG | 0.367065 | 3_2:+91455136 | None:intergenic |
| TTAATATATGTTTCACATAC+TGG | 0.367295 | 3_2:-91455195 | Msa0437270:CDS |
| TCTGTTAGCTCTTCTTGATC+GGG | 0.371855 | 3_2:-91457269 | Msa0437270:intron |
| TACACGAAGTTGTTCCTTAG+AGG | 0.382550 | 3_2:+91457150 | None:intergenic |
| ATCGAGTAAATATTTGTTCT+GGG | 0.383663 | 3_2:-91455067 | Msa0437270:CDS |
| TCTGCAACGAATCGTAATAT+TGG | 0.392297 | 3_2:-91455369 | Msa0437270:CDS |
| AGAAATGGTTGAATCTGAAT+TGG | 0.392690 | 3_2:-91454340 | Msa0437270:CDS |
| ATGGTAAATTAGTGGCAGTT+GGG | 0.392810 | 3_2:-91455116 | Msa0437270:CDS |
| CAGCTCCAGCTGCTGGATAC+AGG | 0.400677 | 3_2:+91453559 | None:intergenic |
| TAGCTCTTCTTGATCGGGGC+TGG | 0.413747 | 3_2:-91457264 | Msa0437270:CDS |
| ATATTCTTCTGGATCAAAAC+TGG | 0.414826 | 3_2:+91455311 | None:intergenic |
| TGCACATGTTCACTGAGAAC+GGG | 0.420815 | 3_2:-91455764 | Msa0437270:CDS |
| GGATACAGGATCTTATTTGC+TGG | 0.421600 | 3_2:+91453573 | None:intergenic |
| TCATCTTCATCTTCATGCAT+TGG | 0.426710 | 3_2:+91454375 | None:intergenic |
| TGCCATTCCTAGAGACAAAT+GGG | 0.431593 | 3_2:+91453527 | None:intergenic |
| TTTGATCCCCATTTGTCTCT+AGG | 0.433714 | 3_2:-91453534 | Msa0437270:three_prime_UTR |
| AGAGATAGTGAGAAGGAGAA+TGG | 0.437181 | 3_2:-91455558 | Msa0437270:CDS |
| GATCGGGGCTGGAGAAGATC+TGG | 0.437268 | 3_2:-91457253 | Msa0437270:CDS |
| TATTTACTCGATAAACAGTT+AGG | 0.441413 | 3_2:+91455078 | None:intergenic |
| GTACTGGAGACTAGGACAAT+AGG | 0.443698 | 3_2:+91454969 | None:intergenic |
| TGCTCTTCAAGAAATTGGTT+GGG | 0.445508 | 3_2:-91455007 | Msa0437270:CDS |
| GAACCATGAGAGATGCTATT+GGG | 0.446557 | 3_2:+91458999 | None:intergenic |
| ACTGAACAATGAATTGAAAT+CGG | 0.447578 | 3_2:-91459199 | Msa0437270:five_prime_UTR |
| GATACAGGATCTTATTTGCT+GGG | 0.448971 | 3_2:+91453574 | None:intergenic |
| TTTAGTGGATGGTAAATTAG+TGG | 0.451470 | 3_2:-91455124 | Msa0437270:CDS |
| TGAAGATGAAGATGAAGAAA+TGG | 0.451588 | 3_2:-91454355 | Msa0437270:CDS |
| TCAAATTCAGCTCCAGCTGC+TGG | 0.453356 | 3_2:+91453552 | None:intergenic |
| TGCTTTCAAGCGGATTGTAT+AGG | 0.453379 | 3_2:+91457186 | None:intergenic |
| GGATTGTTCGATCTTTGATT+GGG | 0.453607 | 3_2:+91459169 | None:intergenic |
| GATATAGAAACTACTTCAAA+TGG | 0.453880 | 3_2:-91454297 | Msa0437270:CDS |
| ACCAAAAGCTTCAGTCAGAA+TGG | 0.453937 | 3_2:-91455718 | Msa0437270:CDS |
| AGTCTCCAGTACTATTATCT+TGG | 0.457037 | 3_2:-91454958 | Msa0437270:CDS |
| ATGCCATTCCTAGAGACAAA+TGG | 0.457435 | 3_2:+91453526 | None:intergenic |
| TGAACCATGAGAGATGCTAT+TGG | 0.459034 | 3_2:+91458998 | None:intergenic |
| TTTCTTTGTTACAGGCATGC+TGG | 0.460312 | 3_2:-91458713 | Msa0437270:intron |
| AGTGATAGAAAGGCAAAGTC+TGG | 0.460759 | 3_2:+91455042 | None:intergenic |
| CTGCTCTTCAAGAAATTGGT+TGG | 0.462545 | 3_2:-91455008 | Msa0437270:CDS |
| TGGAGCATGATGGGTTGTTA+TGG | 0.468006 | 3_2:+91455877 | None:intergenic |
| ATAGAACATAAAATTGATTG+AGG | 0.477237 | 3_2:+91453290 | None:intergenic |
| TTCAGTCAGAATGGTTTCAC+AGG | 0.478971 | 3_2:-91455709 | Msa0437270:CDS |
| GATTGTATAGGAAGGGCAAC+AGG | 0.478971 | 3_2:+91457198 | None:intergenic |
| GGGTTTCATTTGACATTGCA+AGG | 0.480080 | 3_2:-91454545 | Msa0437270:CDS |
| CATCAACAGTATTTAGTGGA+TGG | 0.481200 | 3_2:-91455135 | Msa0437270:CDS |
| TAAAACTATTGCAGAAAAGC+TGG | 0.482141 | 3_2:-91455526 | Msa0437270:CDS |
| CAGAAATACAGGAGGGTTGT+CGG | 0.488102 | 3_2:-91453682 | Msa0437270:CDS |
| CATTTCTGGTCTGTCTATCA+GGG | 0.490558 | 3_2:-91455478 | Msa0437270:CDS |
| TGATCTTCAGCAACTTGAAG+TGG | 0.497795 | 3_2:+91454453 | None:intergenic |
| AGTAGCCAAGATAATAGTAC+TGG | 0.499159 | 3_2:+91454953 | None:intergenic |
| TGAAGTATTTGGTTCCTCCA+TGG | 0.500622 | 3_2:+91455920 | None:intergenic |
| AGTCACAGTTGCAGAAATAC+AGG | 0.501911 | 3_2:-91453693 | Msa0437270:CDS |
| AAGATCCTGTATCCAGCAGC+TGG | 0.502219 | 3_2:-91453564 | Msa0437270:three_prime_UTR |
| GATGGTAAATTAGTGGCAGT+TGG | 0.505487 | 3_2:-91455117 | Msa0437270:CDS |
| CCATATTCAGCAACTAATGC+TGG | 0.513454 | 3_2:+91453374 | None:intergenic |
| GATCTTCAGCAACTTGAAGT+GGG | 0.518193 | 3_2:+91454454 | None:intergenic |
| TCTTCTGACATGGAGCATGA+TGG | 0.520063 | 3_2:+91455867 | None:intergenic |
| TCGTGAGCAGCAGAGATACT+TGG | 0.521603 | 3_2:-91453716 | Msa0437270:CDS |
| GTACTTGCCTAGTGATAGAA+AGG | 0.522687 | 3_2:+91455032 | None:intergenic |
| AAAAGAAGGTATTAGCCAAT+GGG | 0.524221 | 3_2:-91455683 | Msa0437270:CDS |
| TATAGATGCAGCAACTTGAA+AGG | 0.525347 | 3_2:+91455629 | None:intergenic |
| TCCCCATTTGTCTCTAGGAA+TGG | 0.525816 | 3_2:-91453529 | Msa0437270:three_prime_UTR |
| GCTACTATATAAGAGGTCTT+CGG | 0.526478 | 3_2:+91455659 | None:intergenic |
| CTTGACCACTGTCATCAACC+TGG | 0.528218 | 3_2:+91454415 | None:intergenic |
| CTTCTGACATGGAGCATGAT+GGG | 0.528703 | 3_2:+91455868 | None:intergenic |
| TTTGGTAATTGAATACCAGA+TGG | 0.531867 | 3_2:+91455735 | None:intergenic |
| CTATATTGCTACTATATAAG+AGG | 0.536144 | 3_2:+91455652 | None:intergenic |
| AGAGGACATAGTAGCTCTGA+AGG | 0.537283 | 3_2:+91454886 | None:intergenic |
| TCTATCTGTTAGCAATAAAG+AGG | 0.539337 | 3_2:-91455841 | Msa0437270:CDS |
| TAAGAGGTCTTCGGACCCAT+TGG | 0.540930 | 3_2:+91455668 | None:intergenic |
| TCAAGACACTATGTTAAGCC+AGG | 0.546489 | 3_2:-91454433 | Msa0437270:CDS |
| TGGTTGGGTGAAAGATAACC+AGG | 0.546626 | 3_2:-91454992 | Msa0437270:CDS |
| TGGTAAATTAGTGGCAGTTG+GGG | 0.548028 | 3_2:-91455115 | Msa0437270:CDS |
| CAAAGTCACTTGCTTTCAAG+CGG | 0.550013 | 3_2:+91457176 | None:intergenic |
| GAGCGAATGGTCTACTCTCT+CGG | 0.557386 | 3_2:-91453646 | Msa0437270:CDS |
| TTCAAGCGGATTGTATAGGA+AGG | 0.557510 | 3_2:+91457190 | None:intergenic |
| GCAACGAATCGTAATATTGG+AGG | 0.558170 | 3_2:-91455366 | Msa0437270:CDS |
| ACACAGAAAGCTCATATCGC+AGG | 0.558720 | 3_2:-91455236 | Msa0437270:CDS |
| CACTGCATTATCAATCTGAT+CGG | 0.558763 | 3_2:+91455785 | None:intergenic |
| GAGAACGGGGAATTTCCATC+TGG | 0.560903 | 3_2:-91455750 | Msa0437270:CDS |
| GTGCACATGTTCACTGAGAA+CGG | 0.561725 | 3_2:-91455765 | Msa0437270:CDS |
| CTGTCTATCAGGGCTTGCAA+TGG | 0.562657 | 3_2:-91455468 | Msa0437270:CDS |
| TCTTAGTTGAAGCATCAAGT+TGG | 0.565198 | 3_2:-91453329 | Msa0437270:three_prime_UTR |
| TCCAGTGTTATCCGAGCGAA+TGG | 0.566865 | 3_2:-91453659 | Msa0437270:CDS |
| ACACGAAGTTGTTCCTTAGA+GGG | 0.574435 | 3_2:+91457151 | None:intergenic |
| AGATAATAGTACTGGAGACT+AGG | 0.577677 | 3_2:+91454961 | None:intergenic |
| CATGCTGGCATATAGCCTTA+CGG | 0.578182 | 3_2:-91458698 | Msa0437270:CDS |
| CTGTTAGCTCTTCTTGATCG+GGG | 0.579685 | 3_2:-91457268 | Msa0437270:intron |
| GGAAAGCGTCGAAGCTCTTG+TGG | 0.580414 | 3_2:-91459041 | Msa0437270:CDS |
| GACTTTGCCTTTCTATCACT+AGG | 0.581918 | 3_2:-91455039 | Msa0437270:CDS |
| AGCAACAACGCTTTCCTTTG+GGG | 0.582980 | 3_2:+91459070 | None:intergenic |
| CTATAAACCGAGCAAAGTCA+AGG | 0.583219 | 3_2:-91455611 | Msa0437270:CDS |
| GAAAGCGTTGTTGCTGATTG+CGG | 0.585631 | 3_2:-91459062 | Msa0437270:CDS |
| GGAGACTAGGACAATAGGCC+TGG | 0.586272 | 3_2:+91454974 | None:intergenic |
| TCTCTCGGTTAATTATATCT+CGG | 0.586725 | 3_2:-91453631 | Msa0437270:exon |
| CTTGGTAGTCATACACCGTA+AGG | 0.588665 | 3_2:+91458683 | None:intergenic |
| ATCTGTTAGCAATAAAGAGG+TGG | 0.589633 | 3_2:-91455838 | Msa0437270:CDS |
| CCGAGCAAAGTCAAGGGACA+AGG | 0.590380 | 3_2:-91455604 | Msa0437270:CDS |
| ACCATCAAGAGATAGTGAGA+AGG | 0.595095 | 3_2:-91455565 | Msa0437270:CDS |
| GATAACACAGTTCCTCCTTG+TGG | 0.595810 | 3_2:-91455171 | Msa0437270:CDS |
| CGTCCCAATAGCATCTCTCA+TGG | 0.596130 | 3_2:-91459002 | Msa0437270:intron |
| GGGATCCCGTGTGAGATACA+AGG | 0.598121 | 3_2:-91454229 | Msa0437270:intron |
| AGATAGAGATTCTTCTGACA+TGG | 0.604313 | 3_2:+91455857 | None:intergenic |
| ATCTTCAGCAACTTGAAGTG+GGG | 0.605213 | 3_2:+91454455 | None:intergenic |
| ATCATACCTTGTATCTCACA+CGG | 0.611139 | 3_2:+91454223 | None:intergenic |
| ATGATGGGTTGTTATGGACA+AGG | 0.611276 | 3_2:+91455883 | None:intergenic |
| TGAGAGATGCTATTGGGACG+AGG | 0.618053 | 3_2:+91459005 | None:intergenic |
| TCAGTCAGAATGGTTTCACA+GGG | 0.619527 | 3_2:-91455708 | Msa0437270:CDS |
| TAACGCTTTCTGTCAAGCAA+AGG | 0.626789 | 3_2:+91454522 | None:intergenic |
| ACCATTCGCTCGGATAACAC+TGG | 0.627386 | 3_2:+91453658 | None:intergenic |
| GCAAAGTCAAGGGACAAGGA+TGG | 0.632318 | 3_2:-91455600 | Msa0437270:CDS |
| GAAGAATGTCGAGTACGAAG+AGG | 0.633268 | 3_2:-91459115 | Msa0437270:exon |
| TATAAACCGAGCAAAGTCAA+GGG | 0.634803 | 3_2:-91455610 | Msa0437270:CDS |
| CACAGTTGCAGAAATACAGG+AGG | 0.636902 | 3_2:-91453690 | Msa0437270:CDS |
| ATACAGGATCTTATTTGCTG+GGG | 0.638032 | 3_2:+91453575 | None:intergenic |
| TCAAGCGGATTGTATAGGAA+GGG | 0.647018 | 3_2:+91457191 | None:intergenic |
| TGGAAAGAGCCAAAACCACA+AGG | 0.651081 | 3_2:+91455156 | None:intergenic |
| TAGCAGTAGCAAAACCCCAA+AGG | 0.653048 | 3_2:-91459084 | Msa0437270:CDS |
| TTAACTTACTGATAGCGAAG+AGG | 0.662453 | 3_2:+91454868 | None:intergenic |
| GAGAGAGTAGACCATTCGCT+CGG | 0.668897 | 3_2:+91453648 | None:intergenic |
| TGTTAAAAGAGTTGATGCCA+TGG | 0.669144 | 3_2:-91455937 | Msa0437270:CDS |
| GTGTATCTAGACGAATGCAA+AGG | 0.675511 | 3_2:-91457132 | Msa0437270:intron |
| TAAAAGAGTTGATGCCATGG+AGG | 0.680258 | 3_2:-91455934 | Msa0437270:CDS |
| TCATACCTTGTATCTCACAC+GGG | 0.681061 | 3_2:+91454224 | None:intergenic |
| GAGGACATAGTAGCTCTGAA+GGG | 0.681722 | 3_2:+91454887 | None:intergenic |
| GCACATGTTCACTGAGAACG+GGG | 0.681833 | 3_2:-91455763 | Msa0437270:CDS |
| TTAAGCCAGGTTGATGACAG+TGG | 0.699199 | 3_2:-91454420 | Msa0437270:CDS |
| CTTACGGTGTATGACTACCA+AGG | 0.718339 | 3_2:-91458682 | Msa0437270:intron |
| GCCATTCCTAGAGACAAATG+GGG | 0.718410 | 3_2:+91453528 | None:intergenic |
| ACAGTTGCAGAAATACAGGA+GGG | 0.725694 | 3_2:-91453689 | Msa0437270:CDS |
| AAAGAGCCAAAACCACAAGG+AGG | 0.739577 | 3_2:+91455159 | None:intergenic |
| CAGTCAGAATGGTTTCACAG+GGG | 0.766259 | 3_2:-91455707 | Msa0437270:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTAAAATATATATTTTAT+AGG | - | chr3_2:91454436-91454455 | Msa0437270:CDS | 0.0% |
| !! | TTAATTATAAATAAAAAAAA+TGG | + | chr3_2:91456428-91456447 | None:intergenic | 0.0% |
| !!! | TAAAATTCATGTTTTTTTTA+TGG | - | chr3_2:91454633-91454652 | Msa0437270:intron | 10.0% |
| !! | ATTATAAATAAAAAAAATGG+TGG | + | chr3_2:91456425-91456444 | None:intergenic | 10.0% |
| !! | TTGAAAAACAATAAATTTGT+CGG | + | chr3_2:91453326-91453345 | None:intergenic | 15.0% |
| !!! | TTTGAATTCTTTTCTTTTTT+TGG | + | chr3_2:91453410-91453429 | None:intergenic | 15.0% |
| !!! | AAAACCAAAACTTTTTTATT+GGG | + | chr3_2:91453741-91453760 | None:intergenic | 15.0% |
| !!! | AAAAACCAAAACTTTTTTAT+TGG | + | chr3_2:91453742-91453761 | None:intergenic | 15.0% |
| !! | AAAAAAAAAGAATTTCTTAC+TGG | - | chr3_2:91453828-91453847 | Msa0437270:intron | 15.0% |
| !! | AAAAAAAAGAATTTCTTACT+GGG | - | chr3_2:91453829-91453848 | Msa0437270:intron | 15.0% |
| !!! | AAGTAATTATGATACTTTTA+TGG | + | chr3_2:91454410-91454429 | None:intergenic | 15.0% |
| !!! | ACTTTTGATTTTTAAATTGA+TGG | - | chr3_2:91455566-91455585 | Msa0437270:CDS | 15.0% |
| !! | ATGAAAATTGTAACATATAA+AGG | + | chr3_2:91455815-91455834 | None:intergenic | 15.0% |
| !!! | TTTTTGAATAGTAACATTTT+GGG | + | chr3_2:91457233-91457252 | None:intergenic | 15.0% |
| !!! | ATATACGGAATTTAATTTAA+TGG | - | chr3_2:91459230-91459249 | Msa0437270:five_prime_UTR | 15.0% |
| !!! | ATTCTTTTCTTTTTTTGGAA+TGG | + | chr3_2:91453405-91453424 | None:intergenic | 20.0% |
| !! | AAACAAATTCAACGAAATTA+GGG | + | chr3_2:91453686-91453705 | None:intergenic | 20.0% |
| !!! | AAAACCCAATAAAAAAGTTT+TGG | - | chr3_2:91453734-91453753 | Msa0437270:CDS | 20.0% |
| !!! | TTTCTTTTTTTCTTTGTTAC+AGG | - | chr3_2:91453919-91453938 | Msa0437270:intron | 20.0% |
| !! | TATAAAAAAAAGTTGAGACA+AGG | - | chr3_2:91454519-91454538 | Msa0437270:CDS | 20.0% |
| !!! | AAAAACATGAATTTTAAGTC+TGG | + | chr3_2:91454629-91454648 | None:intergenic | 20.0% |
| !!! | ACGTAAAGTTTTTGAAATTT+AGG | + | chr3_2:91454941-91454960 | None:intergenic | 20.0% |
| !!! | TGGAACTTTTATTTATAAAC+CGG | - | chr3_2:91455407-91455426 | Msa0437270:CDS | 20.0% |
| !!! | CTTTTTGAATAGTAACATTT+TGG | + | chr3_2:91457234-91457253 | None:intergenic | 20.0% |
| !! | GTATGTGAAACATATATTAA+TGG | + | chr3_2:91457445-91457464 | None:intergenic | 20.0% |
| !! | TTAATATATGTTTCACATAC+TGG | - | chr3_2:91457445-91457464 | Msa0437270:intron | 20.0% |
| !! | GTTAACATTATCTATTTCAT+AGG | + | chr3_2:91457934-91457953 | None:intergenic | 20.0% |
| !! | AAATAAAATATCGGTAAGTA+GGG | + | chr3_2:91458669-91458688 | None:intergenic | 20.0% |
| !!! | ATTATGTGAACTTAAGTTTT+TGG | - | chr3_2:91459148-91459167 | Msa0437270:five_prime_UTR | 20.0% |
| !! | ATAGAACATAAAATTGATTG+AGG | + | chr3_2:91459353-91459372 | None:intergenic | 20.0% |
| ! | TCGGACTTAAATATTGATAT+AGG | + | chr3_2:91453307-91453326 | None:intergenic | 25.0% |
| ! | ACTGAACAATGAATTGAAAT+CGG | - | chr3_2:91453441-91453460 | Msa0437270:three_prime_UTR | 25.0% |
| ! | TCAGAAGAGATGAAAATTTA+GGG | + | chr3_2:91453495-91453514 | None:intergenic | 25.0% |
| ! | TTCAGAAGAGATGAAAATTT+AGG | + | chr3_2:91453496-91453515 | None:intergenic | 25.0% |
| ! | AACAAATTCAACGAAATTAG+GGG | + | chr3_2:91453685-91453704 | None:intergenic | 25.0% |
| ! | CAAACAAATTCAACGAAATT+AGG | + | chr3_2:91453687-91453706 | None:intergenic | 25.0% |
| !! | AATTTCGTTGAATTTGTTTG+CGG | - | chr3_2:91453687-91453706 | Msa0437270:CDS | 25.0% |
| !!! | TTTTTAACTGAAACGTGAAT+TGG | - | chr3_2:91453757-91453776 | Msa0437270:intron | 25.0% |
| !!! | TTTTAACTGAAACGTGAATT+GGG | - | chr3_2:91453758-91453777 | Msa0437270:intron | 25.0% |
| !!! | CATGTTTTTTTTATGGATGA+TGG | - | chr3_2:91454640-91454659 | Msa0437270:intron | 25.0% |
| !!! | TTTTTTATGGATGATGGTAA+TGG | - | chr3_2:91454646-91454665 | Msa0437270:intron | 25.0% |
| !!! | TTTTTATGGATGATGGTAAT+GGG | - | chr3_2:91454647-91454666 | Msa0437270:intron | 25.0% |
| !! | TTTTGTTGATATCCTAACAT+AGG | - | chr3_2:91454729-91454748 | Msa0437270:intron | 25.0% |
| ! | TTTGTTGATATCCTAACATA+GGG | - | chr3_2:91454730-91454749 | Msa0437270:intron | 25.0% |
| !! | TAAGTAAAGATTCTTTGAAG+GGG | + | chr3_2:91455121-91455140 | None:intergenic | 25.0% |
| ! | CTAAGTAAAGATTCTTTGAA+GGG | + | chr3_2:91455122-91455141 | None:intergenic | 25.0% |
| ! | TCTAAGTAAAGATTCTTTGA+AGG | + | chr3_2:91455123-91455142 | None:intergenic | 25.0% |
| !!! | TTTTATTTATAAACCGGAGA+TGG | - | chr3_2:91455413-91455432 | Msa0437270:CDS | 25.0% |
| ! | CATCATTATAGACATGATAT+GGG | - | chr3_2:91455645-91455664 | Msa0437270:CDS | 25.0% |
| ! | GAGATAAATATGAATTCGAT+AGG | + | chr3_2:91455877-91455896 | None:intergenic | 25.0% |
| ! | TCAGTAAAAGAATAAACCTT+TGG | - | chr3_2:91456151-91456170 | Msa0437270:intron | 25.0% |
| ! | CAGTAAAAGAATAAACCTTT+GGG | - | chr3_2:91456152-91456171 | Msa0437270:intron | 25.0% |
| !!! | ACACTTTTTTCTATTTTCTC+TGG | - | chr3_2:91456450-91456469 | Msa0437270:intron | 25.0% |
| ! | TTCTTGCTAAAATAAAGGAA+AGG | + | chr3_2:91456529-91456548 | None:intergenic | 25.0% |
| ! | GAAAGTTCTTGCTAAAATAA+AGG | + | chr3_2:91456534-91456553 | None:intergenic | 25.0% |
| !!! | TATTTTAGCAAGAACTTTCA+AGG | - | chr3_2:91456535-91456554 | Msa0437270:intron | 25.0% |
| ! | TGAATTGCATATAATAGAAG+GGG | + | chr3_2:91456586-91456605 | None:intergenic | 25.0% |
| ! | GTGAATTGCATATAATAGAA+GGG | + | chr3_2:91456587-91456606 | None:intergenic | 25.0% |
| ! | AGTGAATTGCATATAATAGA+AGG | + | chr3_2:91456588-91456607 | None:intergenic | 25.0% |
| ! | AAACAAATTGGAACATTTAC+GGG | + | chr3_2:91456628-91456647 | None:intergenic | 25.0% |
| ! | CAAACAAATTGGAACATTTA+CGG | + | chr3_2:91456629-91456648 | None:intergenic | 25.0% |
| !! | TCTGAATTGTTTGAAGTATT+TGG | + | chr3_2:91456734-91456753 | None:intergenic | 25.0% |
| ! | CTATATTGCTACTATATAAG+AGG | + | chr3_2:91456991-91457010 | None:intergenic | 25.0% |
| ! | CTATATAAAGCATATTCTTC+TGG | + | chr3_2:91457343-91457362 | None:intergenic | 25.0% |
| ! | TATTTACTCGATAAACAGTT+AGG | + | chr3_2:91457565-91457584 | None:intergenic | 25.0% |
| ! | TATCGAGTAAATATTTGTTC+TGG | - | chr3_2:91457572-91457591 | Msa0437270:intron | 25.0% |
| ! | ATCGAGTAAATATTTGTTCT+GGG | - | chr3_2:91457573-91457592 | Msa0437270:intron | 25.0% |
| !! | TTTGAAGTAGTTTCTATATC+AGG | + | chr3_2:91458343-91458362 | None:intergenic | 25.0% |
| ! | GATATAGAAACTACTTCAAA+TGG | - | chr3_2:91458343-91458362 | Msa0437270:intron | 25.0% |
| ! | GTATGAAAAGGAAGAAATAT+AGG | + | chr3_2:91458597-91458616 | None:intergenic | 25.0% |
| !!! | TTGTCTTGGTAATATCTTTT+CGG | + | chr3_2:91458629-91458648 | None:intergenic | 25.0% |
| !! | GAGAAATTACAATTTTGTCT+TGG | + | chr3_2:91458643-91458662 | None:intergenic | 25.0% |
| ! | AATAAAATATCGGTAAGTAG+GGG | + | chr3_2:91458668-91458687 | None:intergenic | 25.0% |
| ! | CAAATAAAATATCGGTAAGT+AGG | + | chr3_2:91458670-91458689 | None:intergenic | 25.0% |
| !! | CTACTTACCGATATTTTATT+TGG | - | chr3_2:91458668-91458687 | Msa0437270:intron | 25.0% |
| ! | GTTACCTCCAAATAAAATAT+CGG | + | chr3_2:91458678-91458697 | None:intergenic | 25.0% |
| !!! | ATATTTTATTTGGAGGTAAC+CGG | - | chr3_2:91458678-91458697 | Msa0437270:intron | 25.0% |
| !!! | TTAGTTTTTCCTTAAACACA+TGG | + | chr3_2:91458737-91458756 | None:intergenic | 25.0% |
| TACTCGACATTCTTCAATTT+CGG | + | chr3_2:91453520-91453539 | None:intergenic | 30.0% | |
| TGTTTGGATTGTTGTGTTAT+AGG | - | chr3_2:91453853-91453872 | Msa0437270:intron | 30.0% | |
| TTAGAAGCCTATAAAGAAGA+GGG | + | chr3_2:91454231-91454250 | None:intergenic | 30.0% | |
| ATTAGAAGCCTATAAAGAAG+AGG | + | chr3_2:91454232-91454251 | None:intergenic | 30.0% | |
| ATTTGCCAACAAACCATTAT+AGG | - | chr3_2:91454288-91454307 | Msa0437270:CDS | 30.0% | |
| ! | TATGGATACATCCCTATTTT+AGG | + | chr3_2:91454332-91454351 | None:intergenic | 30.0% |
| AAATAGGGATGTATCCATAT+AGG | - | chr3_2:91454333-91454352 | Msa0437270:CDS | 30.0% | |
| ! | ATACTACATATCGAGAGTAT+TGG | + | chr3_2:91454384-91454403 | None:intergenic | 30.0% |
| GATACTTATAAGATGCTTCA+CGG | - | chr3_2:91454458-91454477 | Msa0437270:CDS | 30.0% | |
| GCTTAATAACTAGATTAGCA+TGG | - | chr3_2:91455052-91455071 | Msa0437270:CDS | 30.0% | |
| ! | AAGTAAAGATTCTTTGAAGG+GGG | + | chr3_2:91455120-91455139 | None:intergenic | 30.0% |
| TAAGCCTTCTCTATTTAAAG+AGG | + | chr3_2:91455160-91455179 | None:intergenic | 30.0% | |
| AAGGCTTATCTCATCTAAAA+AGG | - | chr3_2:91455172-91455191 | Msa0437270:CDS | 30.0% | |
| AGGCTTATCTCATCTAAAAA+GGG | - | chr3_2:91455173-91455192 | Msa0437270:CDS | 30.0% | |
| ATCAGCAAATCAATTTAGCT+TGG | + | chr3_2:91455314-91455333 | None:intergenic | 30.0% | |
| !! | TGATTTGCTGATATGACTTT+CGG | - | chr3_2:91455322-91455341 | Msa0437270:CDS | 30.0% |
| ! | TTCAAGTTCAAAAGCTTTGT+TGG | - | chr3_2:91455622-91455641 | Msa0437270:CDS | 30.0% |
| GCATCATTATAGACATGATA+TGG | - | chr3_2:91455644-91455663 | Msa0437270:CDS | 30.0% | |
| TTATATCAGTCAAATGAGTG+AGG | + | chr3_2:91455706-91455725 | None:intergenic | 30.0% | |
| ACATATAAAGGAAACTCTGA+AGG | + | chr3_2:91455803-91455822 | None:intergenic | 30.0% | |
| ! | TGTTACAATTTTCATTCTCC+CGG | - | chr3_2:91455820-91455839 | Msa0437270:CDS | 30.0% |
| TATTCAACTCGTATTCCAAA+AGG | + | chr3_2:91456370-91456389 | None:intergenic | 30.0% | |
| !!! | CTTTTTTCTATTTTCTCTGG+AGG | - | chr3_2:91456453-91456472 | Msa0437270:intron | 30.0% |
| TGCATCAATGTATTACCATA+AGG | - | chr3_2:91456493-91456512 | Msa0437270:intron | 30.0% | |
| TTTCAAGGAGGTTAAATACA+CGG | - | chr3_2:91456550-91456569 | Msa0437270:intron | 30.0% | |
| AATTGCATATAATAGAAGGG+GGG | + | chr3_2:91456584-91456603 | None:intergenic | 30.0% | |
| GAATTGCATATAATAGAAGG+GGG | + | chr3_2:91456585-91456604 | None:intergenic | 30.0% | |
| GAAAAGTGGAACAAACAAAT+TGG | + | chr3_2:91456640-91456659 | None:intergenic | 30.0% | |
| !! | TTTCTTCCTAGGTTTTTAGA+TGG | - | chr3_2:91456671-91456690 | Msa0437270:intron | 30.0% |
| ! | ATCAACTCTTTTAACATCCA+AGG | + | chr3_2:91456699-91456718 | None:intergenic | 30.0% |
| TCTATCTGTTAGCAATAAAG+AGG | - | chr3_2:91456799-91456818 | Msa0437270:intron | 30.0% | |
| ! | TTTGGTAATTGAATACCAGA+TGG | + | chr3_2:91456908-91456927 | None:intergenic | 30.0% |
| !! | AAAAAGAAGGTATTAGCCAA+TGG | - | chr3_2:91456956-91456975 | Msa0437270:intron | 30.0% |
| !! | AAAAGAAGGTATTAGCCAAT+GGG | - | chr3_2:91456957-91456976 | Msa0437270:intron | 30.0% |
| ! | AGCTTTTCTGCAATAGTTTT+AGG | + | chr3_2:91457115-91457134 | None:intergenic | 30.0% |
| TAAAACTATTGCAGAAAAGC+TGG | - | chr3_2:91457114-91457133 | Msa0437270:intron | 30.0% | |
| ATATTCTTCTGGATCAAAAC+TGG | + | chr3_2:91457332-91457351 | None:intergenic | 30.0% | |
| TTTCCATCAACAGTATTTAG+TGG | - | chr3_2:91457501-91457520 | Msa0437270:intron | 30.0% | |
| ! | TTTAGTGGATGGTAAATTAG+TGG | - | chr3_2:91457516-91457535 | Msa0437270:intron | 30.0% |
| ! | TTTTGGATAAACTACAAGCA+TGG | + | chr3_2:91457832-91457851 | None:intergenic | 30.0% |
| ! | ACGTTTATGCACAAAGTTTT+TGG | + | chr3_2:91457849-91457868 | None:intergenic | 30.0% |
| TATAGTAGAAGACTATGAAG+AGG | + | chr3_2:91457966-91457985 | None:intergenic | 30.0% | |
| ATTCAAAATCAAGCAAGCAA+CGG | + | chr3_2:91458006-91458025 | None:intergenic | 30.0% | |
| TTTCACATAATATAGGAGGT+GGG | + | chr3_2:91458041-91458060 | None:intergenic | 30.0% | |
| CTTGTTTCACATAATATAGG+AGG | + | chr3_2:91458045-91458064 | None:intergenic | 30.0% | |
| CTCCTATATTATGTGAAACA+AGG | - | chr3_2:91458043-91458062 | Msa0437270:intron | 30.0% | |
| !! | AGCCTTGTTTCACATAATAT+AGG | + | chr3_2:91458048-91458067 | None:intergenic | 30.0% |
| ! | GATGCTTCCATTTTACAAAA+TGG | - | chr3_2:91458154-91458173 | Msa0437270:intron | 30.0% |
| ! | TGACTCTCCATTTTGTAAAA+TGG | + | chr3_2:91458164-91458183 | None:intergenic | 30.0% |
| AGAAATGGTTGAATCTGAAT+TGG | - | chr3_2:91458300-91458319 | Msa0437270:intron | 30.0% | |
| ! | ATTTCAGCAAAGTTTTGCTA+GGG | - | chr3_2:91458383-91458402 | Msa0437270:intron | 30.0% |
| ! | AAAGTTTTGCTAGGGATAAA+GGG | - | chr3_2:91458391-91458410 | Msa0437270:intron | 30.0% |
| !! | CAACTAACATTTTCTAAGGA+TGG | + | chr3_2:91458495-91458514 | None:intergenic | 30.0% |
| ! | TTCGCAACTAACATTTTCTA+AGG | + | chr3_2:91458499-91458518 | None:intergenic | 30.0% |
| TGTTAGTTGCGAAAAATTGT+AGG | - | chr3_2:91458506-91458525 | Msa0437270:intron | 30.0% | |
| ATAGCGAGTATGTTTCAAAA+TGG | - | chr3_2:91458547-91458566 | Msa0437270:intron | 30.0% | |
| !! | TGTCTTGGTAATATCTTTTC+GGG | + | chr3_2:91458628-91458647 | None:intergenic | 30.0% |
| !! | CTTACCGATATTTTATTTGG+AGG | - | chr3_2:91458671-91458690 | Msa0437270:intron | 30.0% |
| !!! | CAACATGACTAGTTTTACAT+TGG | + | chr3_2:91458764-91458783 | None:intergenic | 30.0% |
| ATGATTTATTTGTCCCATTC+TGG | - | chr3_2:91458828-91458847 | Msa0437270:intron | 30.0% | |
| TCTCTCGGTTAATTATATCT+CGG | - | chr3_2:91459009-91459028 | Msa0437270:CDS | 30.0% | |
| !!! | GAACTTAAGTTTTTGGTCAA+TGG | - | chr3_2:91459155-91459174 | Msa0437270:five_prime_UTR | 30.0% |
| TTCTTGTGCATTTGCATATA+CGG | - | chr3_2:91459215-91459234 | Msa0437270:five_prime_UTR | 30.0% | |
| GGATTGTTCGATCTTTGATT+GGG | + | chr3_2:91453474-91453493 | None:intergenic | 35.0% | |
| ACTCGACATTCTTCAATTTC+GGG | + | chr3_2:91453519-91453538 | None:intergenic | 35.0% | |
| ATTAGGGGAATTGAAGAGAA+AGG | + | chr3_2:91453670-91453689 | None:intergenic | 35.0% | |
| ! | AATTGGGTTGTTGTTGTAGT+TGG | - | chr3_2:91453774-91453793 | Msa0437270:intron | 35.0% |
| GAATTTCTTACTGGGTTGTT+TGG | - | chr3_2:91453837-91453856 | Msa0437270:intron | 35.0% | |
| TGTTTGACATTCTTTGTGCT+TGG | - | chr3_2:91453988-91454007 | Msa0437270:intron | 35.0% | |
| TGTGTTGTACCTATATGACA+TGG | - | chr3_2:91454123-91454142 | Msa0437270:intron | 35.0% | |
| TGTACCTATATGACATGGTT+TGG | - | chr3_2:91454128-91454147 | Msa0437270:intron | 35.0% | |
| AGTTCCAAACCATGTCATAT+AGG | + | chr3_2:91454135-91454154 | None:intergenic | 35.0% | |
| TCATCACTTCAGTGTCAAAA+AGG | + | chr3_2:91454187-91454206 | None:intergenic | 35.0% | |
| TCCAAATGTGCTTATGCTTT+CGG | - | chr3_2:91454261-91454280 | Msa0437270:CDS | 35.0% | |
| !!! | TCCCTATTTTAGGAGTATCT+GGG | + | chr3_2:91454322-91454341 | None:intergenic | 35.0% |
| !!! | ATCCCTATTTTAGGAGTATC+TGG | + | chr3_2:91454323-91454342 | None:intergenic | 35.0% |
| TATCCATATAGGATACGTGT+CGG | - | chr3_2:91454344-91454363 | Msa0437270:CDS | 35.0% | |
| ACAAGGTTGTGATAATTCAG+TGG | - | chr3_2:91454536-91454555 | Msa0437270:CDS | 35.0% | |
| TTGATATCCTAACATAGGGA+TGG | - | chr3_2:91454734-91454753 | Msa0437270:intron | 35.0% | |
| ACTTTACGTATCAGTGTATC+CGG | - | chr3_2:91454952-91454971 | Msa0437270:CDS | 35.0% | |
| ACTAGTTCATTGTTCATTGG+AGG | + | chr3_2:91455086-91455105 | None:intergenic | 35.0% | |
| GGTACTAGTTCATTGTTCAT+TGG | + | chr3_2:91455089-91455108 | None:intergenic | 35.0% | |
| ! | AGTAAAGATTCTTTGAAGGG+GGG | + | chr3_2:91455119-91455138 | None:intergenic | 35.0% |
| CTTCTCTATTTAAAGAGGTC+GGG | + | chr3_2:91455155-91455174 | None:intergenic | 35.0% | |
| CCTTCTCTATTTAAAGAGGT+CGG | + | chr3_2:91455156-91455175 | None:intergenic | 35.0% | |
| GGCTTATCTCATCTAAAAAG+GGG | - | chr3_2:91455174-91455193 | Msa0437270:CDS | 35.0% | |
| TAATAACTAGGATCGCAACA+GGG | + | chr3_2:91455235-91455254 | None:intergenic | 35.0% | |
| TTAATAACTAGGATCGCAAC+AGG | + | chr3_2:91455236-91455255 | None:intergenic | 35.0% | |
| TTGCGATCCTAGTTATTAAC+AGG | - | chr3_2:91455237-91455256 | Msa0437270:CDS | 35.0% | |
| TACTGCTCCTGTTAATAACT+AGG | + | chr3_2:91455247-91455266 | None:intergenic | 35.0% | |
| ! | TTCTGTTAGCTCTTCTTGAT+CGG | - | chr3_2:91455370-91455389 | Msa0437270:CDS | 35.0% |
| ATTACGTATCAGTGAGAAAG+AGG | + | chr3_2:91455740-91455759 | None:intergenic | 35.0% | |
| ! | AGCATAAGCATCTAAGATTC+CGG | + | chr3_2:91455842-91455861 | None:intergenic | 35.0% |
| CTTGCTAGTTGTTATACACA+AGG | - | chr3_2:91456094-91456113 | Msa0437270:intron | 35.0% | |
| AAATCAAATCACCATTCACC+AGG | + | chr3_2:91456191-91456210 | None:intergenic | 35.0% | |
| !! | TTTTCTATTTTCTCTGGAGG+TGG | - | chr3_2:91456456-91456475 | Msa0437270:intron | 35.0% |
| !! | TTTCTATTTTCTCTGGAGGT+GGG | - | chr3_2:91456457-91456476 | Msa0437270:intron | 35.0% |
| TTTAGCAAGAACTTTCAAGG+AGG | - | chr3_2:91456538-91456557 | Msa0437270:intron | 35.0% | |
| TTCAAGGAGGTTAAATACAC+GGG | - | chr3_2:91456551-91456570 | Msa0437270:intron | 35.0% | |
| AAGGTTCCATCTAAAAACCT+AGG | + | chr3_2:91456680-91456699 | None:intergenic | 35.0% | |
| !! | TAGGTTTTTAGATGGAACCT+TGG | - | chr3_2:91456679-91456698 | Msa0437270:intron | 35.0% |
| !! | TGTTAAAAGAGTTGATGCCA+TGG | - | chr3_2:91456703-91456722 | Msa0437270:intron | 35.0% |
| AGATAGAGATTCTTCTGACA+TGG | + | chr3_2:91456786-91456805 | None:intergenic | 35.0% | |
| ATCTGTTAGCAATAAAGAGG+TGG | - | chr3_2:91456802-91456821 | Msa0437270:intron | 35.0% | |
| CACTGCATTATCAATCTGAT+CGG | + | chr3_2:91456858-91456877 | None:intergenic | 35.0% | |
| GCTACTATATAAGAGGTCTT+CGG | + | chr3_2:91456984-91457003 | None:intergenic | 35.0% | |
| TATAGATGCAGCAACTTGAA+AGG | + | chr3_2:91457014-91457033 | None:intergenic | 35.0% | |
| TATAAACCGAGCAAAGTCAA+GGG | - | chr3_2:91457030-91457049 | Msa0437270:intron | 35.0% | |
| GATTCAACAGTGAACATTTC+TGG | - | chr3_2:91457148-91457167 | Msa0437270:CDS | 35.0% | |
| TCTGCAACGAATCGTAATAT+TGG | - | chr3_2:91457271-91457290 | Msa0437270:intron | 35.0% | |
| ! | GAGCTTTCTGTGTAATTTTC+TGG | + | chr3_2:91457397-91457416 | None:intergenic | 35.0% |
| CATCCACTAAATACTGTTGA+TGG | + | chr3_2:91457507-91457526 | None:intergenic | 35.0% | |
| CATCAACAGTATTTAGTGGA+TGG | - | chr3_2:91457505-91457524 | Msa0437270:intron | 35.0% | |
| ATGGTAAATTAGTGGCAGTT+GGG | - | chr3_2:91457524-91457543 | Msa0437270:intron | 35.0% | |
| TACTCTGCTCTTCAAGAAAT+TGG | - | chr3_2:91457628-91457647 | Msa0437270:intron | 35.0% | |
| TGCTCTTCAAGAAATTGGTT+GGG | - | chr3_2:91457633-91457652 | Msa0437270:intron | 35.0% | |
| ! | AGATAATAGTACTGGAGACT+AGG | + | chr3_2:91457682-91457701 | None:intergenic | 35.0% |
| AGTCTCCAGTACTATTATCT+TGG | - | chr3_2:91457682-91457701 | Msa0437270:intron | 35.0% | |
| AGTAGCCAAGATAATAGTAC+TGG | + | chr3_2:91457690-91457709 | None:intergenic | 35.0% | |
| ! | TTAACTTACTGATAGCGAAG+AGG | + | chr3_2:91457775-91457794 | None:intergenic | 35.0% |
| ACTATATCAGCATGCTGTAT+AGG | - | chr3_2:91457980-91457999 | Msa0437270:intron | 35.0% | |
| GTTTCACATAATATAGGAGG+TGG | + | chr3_2:91458042-91458061 | None:intergenic | 35.0% | |
| AACATCAATGAATGATCTCC+AGG | - | chr3_2:91458071-91458090 | Msa0437270:intron | 35.0% | |
| TCAAATGGTGAACCAGAAAA+TGG | - | chr3_2:91458358-91458377 | Msa0437270:intron | 35.0% | |
| ! | GATTTCAGCAAAGTTTTGCT+AGG | - | chr3_2:91458382-91458401 | Msa0437270:intron | 35.0% |
| ! | CAAAGTTTTGCTAGGGATAA+AGG | - | chr3_2:91458390-91458409 | Msa0437270:intron | 35.0% |
| ATCATACCTTGTATCTCACA+CGG | + | chr3_2:91458420-91458439 | None:intergenic | 35.0% | |
| GTGAATTTCAGACATGTTGT+CGG | - | chr3_2:91458569-91458588 | Msa0437270:intron | 35.0% | |
| TAGTGATAGAGGAAAGAGTT+TGG | - | chr3_2:91458709-91458728 | Msa0437270:intron | 35.0% | |
| AGTTTGGATCCATGTGTTTA+AGG | - | chr3_2:91458725-91458744 | Msa0437270:intron | 35.0% | |
| ACTAGTCATGTTGCATGTTT+AGG | - | chr3_2:91458771-91458790 | Msa0437270:intron | 35.0% | |
| ATGGGACAAATAAATCATGC+AGG | + | chr3_2:91458826-91458845 | None:intergenic | 35.0% | |
| AAGGATCTGCAAAGTGTATT+TGG | - | chr3_2:91458901-91458920 | Msa0437270:intron | 35.0% | |
| ! | ATACAGGATCTTATTTGCTG+GGG | + | chr3_2:91459068-91459087 | None:intergenic | 35.0% |
| ! | GATACAGGATCTTATTTGCT+GGG | + | chr3_2:91459069-91459088 | None:intergenic | 35.0% |
| ! | TCTTAGTTGAAGCATCAAGT+TGG | - | chr3_2:91459311-91459330 | Msa0437270:five_prime_UTR | 35.0% |
| GGGATTGTTCGATCTTTGAT+TGG | + | chr3_2:91453475-91453494 | None:intergenic | 40.0% | |
| GAACCATGAGAGATGCTATT+GGG | + | chr3_2:91453644-91453663 | None:intergenic | 40.0% | |
| TGAACCATGAGAGATGCTAT+TGG | + | chr3_2:91453645-91453664 | None:intergenic | 40.0% | |
| TTTCTTTGTTACAGGCATGC+TGG | - | chr3_2:91453927-91453946 | Msa0437270:intron | 40.0% | |
| ATGTCAAACAACACCAACCT+TGG | + | chr3_2:91453978-91453997 | None:intergenic | 40.0% | |
| GTTCAGACCCTCTTCTTTAT+AGG | - | chr3_2:91454221-91454240 | Msa0437270:intron | 40.0% | |
| ! | TCCGAAAGCATAAGCACATT+TGG | + | chr3_2:91454265-91454284 | None:intergenic | 40.0% |
| ! | CGTAGCCTATAATGGTTTGT+TGG | + | chr3_2:91454296-91454315 | None:intergenic | 40.0% |
| AGCCCAGATACTCCTAAAAT+AGG | - | chr3_2:91454317-91454336 | Msa0437270:CDS | 40.0% | |
| GCCCAGATACTCCTAAAATA+GGG | - | chr3_2:91454318-91454337 | Msa0437270:CDS | 40.0% | |
| ATGCTTCACGGATATACTCT+CGG | - | chr3_2:91454470-91454489 | Msa0437270:CDS | 40.0% | |
| CTATTCTCCATCCCTATGTT+AGG | + | chr3_2:91454744-91454763 | None:intergenic | 40.0% | |
| GGTGTGAAAGTAAAACGATC+CGG | + | chr3_2:91454974-91454993 | None:intergenic | 40.0% | |
| ! | GTAAAGATTCTTTGAAGGGG+GGG | + | chr3_2:91455118-91455137 | None:intergenic | 40.0% |
| TTTAAAGAGGTCGGGAGAAA+TGG | + | chr3_2:91455147-91455166 | None:intergenic | 40.0% | |
| CCGACCTCTTTAAATAGAGA+AGG | - | chr3_2:91455153-91455172 | Msa0437270:CDS | 40.0% | |
| AAAGGGGACTCATTATTCAC+TGG | - | chr3_2:91455190-91455209 | Msa0437270:CDS | 40.0% | |
| !! | CAACAGGGTTTTTGTTTCAG+TGG | + | chr3_2:91455220-91455239 | None:intergenic | 40.0% |
| ! | TCTGTTAGCTCTTCTTGATC+GGG | - | chr3_2:91455371-91455390 | Msa0437270:CDS | 40.0% |
| !!! | CAACAGGTTTTTTCCATCTC+CGG | + | chr3_2:91455429-91455448 | None:intergenic | 40.0% |
| !! | TCAAGCGGATTGTATAGGAA+GGG | + | chr3_2:91455452-91455471 | None:intergenic | 40.0% |
| !! | TTCAAGCGGATTGTATAGGA+AGG | + | chr3_2:91455453-91455472 | None:intergenic | 40.0% |
| !! | TGCTTTCAAGCGGATTGTAT+AGG | + | chr3_2:91455457-91455476 | None:intergenic | 40.0% |
| CAAAGTCACTTGCTTTCAAG+CGG | + | chr3_2:91455467-91455486 | None:intergenic | 40.0% | |
| AAGTGACTTTGTTCCCTCTA+AGG | - | chr3_2:91455476-91455495 | Msa0437270:CDS | 40.0% | |
| ACACGAAGTTGTTCCTTAGA+GGG | + | chr3_2:91455492-91455511 | None:intergenic | 40.0% | |
| TACACGAAGTTGTTCCTTAG+AGG | + | chr3_2:91455493-91455512 | None:intergenic | 40.0% | |
| GTGTATCTAGACGAATGCAA+AGG | - | chr3_2:91455508-91455527 | Msa0437270:CDS | 40.0% | |
| ATCAGTGAGAAAGAGGATGA+TGG | + | chr3_2:91455733-91455752 | None:intergenic | 40.0% | |
| ! | GCATAAGCATCTAAGATTCC+GGG | + | chr3_2:91455841-91455860 | None:intergenic | 40.0% |
| ! | GTATGTGAGTTGAGACTTGA+TGG | - | chr3_2:91456262-91456281 | Msa0437270:intron | 40.0% |
| AAGTCCTCACATAGTCACAT+GGG | - | chr3_2:91456323-91456342 | Msa0437270:intron | 40.0% | |
| AAAGGAGAAGCAACACCTTA+TGG | + | chr3_2:91456511-91456530 | None:intergenic | 40.0% | |
| !! | TTTGTTCCACTTTTCACCGA+TGG | - | chr3_2:91456645-91456664 | Msa0437270:intron | 40.0% |
| AAAGAACCATCGGTGAAAAG+TGG | + | chr3_2:91456654-91456673 | None:intergenic | 40.0% | |
| ACCTAGGAAGAAAGAACCAT+CGG | + | chr3_2:91456664-91456683 | None:intergenic | 40.0% | |
| !! | TAAAAGAGTTGATGCCATGG+AGG | - | chr3_2:91456706-91456725 | Msa0437270:intron | 40.0% |
| ! | TGAAGTATTTGGTTCCTCCA+TGG | + | chr3_2:91456723-91456742 | None:intergenic | 40.0% |
| !! | ATGATGGGTTGTTATGGACA+AGG | + | chr3_2:91456760-91456779 | None:intergenic | 40.0% |
| ACCAAAAGCTTCAGTCAGAA+TGG | - | chr3_2:91456922-91456941 | Msa0437270:intron | 40.0% | |
| ! | ACCATTCTGACTGAAGCTTT+TGG | + | chr3_2:91456926-91456945 | None:intergenic | 40.0% |
| TTCAGTCAGAATGGTTTCAC+AGG | - | chr3_2:91456931-91456950 | Msa0437270:intron | 40.0% | |
| TCAGTCAGAATGGTTTCACA+GGG | - | chr3_2:91456932-91456951 | Msa0437270:intron | 40.0% | |
| CTATAAACCGAGCAAAGTCA+AGG | - | chr3_2:91457029-91457048 | Msa0437270:intron | 40.0% | |
| ACCATCAAGAGATAGTGAGA+AGG | - | chr3_2:91457075-91457094 | Msa0437270:intron | 40.0% | |
| TCCTTCTCACTATCTCTTGA+TGG | + | chr3_2:91457079-91457098 | None:intergenic | 40.0% | |
| AGAGATAGTGAGAAGGAGAA+TGG | - | chr3_2:91457082-91457101 | Msa0437270:intron | 40.0% | |
| !! | ACATTTCTGGTCTGTCTATC+AGG | - | chr3_2:91457161-91457180 | Msa0437270:CDS | 40.0% |
| !! | CATTTCTGGTCTGTCTATCA+GGG | - | chr3_2:91457162-91457181 | Msa0437270:CDS | 40.0% |
| GCAACGAATCGTAATATTGG+AGG | - | chr3_2:91457274-91457293 | Msa0437270:intron | 40.0% | |
| ! | AAGCTCATATCGCAGGTTTT+TGG | - | chr3_2:91457411-91457430 | Msa0437270:intron | 40.0% |
| GATGGTAAATTAGTGGCAGT+TGG | - | chr3_2:91457523-91457542 | Msa0437270:intron | 40.0% | |
| TGGTAAATTAGTGGCAGTTG+GGG | - | chr3_2:91457525-91457544 | Msa0437270:intron | 40.0% | |
| AGTGATAGAAAGGCAAAGTC+TGG | + | chr3_2:91457601-91457620 | None:intergenic | 40.0% | |
| GACTTTGCCTTTCTATCACT+AGG | - | chr3_2:91457601-91457620 | Msa0437270:intron | 40.0% | |
| GTACTTGCCTAGTGATAGAA+AGG | + | chr3_2:91457611-91457630 | None:intergenic | 40.0% | |
| CTGCTCTTCAAGAAATTGGT+TGG | - | chr3_2:91457632-91457651 | Msa0437270:intron | 40.0% | |
| AAACTACAAGCATGGTGAAG+TGG | + | chr3_2:91457824-91457843 | None:intergenic | 40.0% | |
| ATCAATGAATGATCTCCAGG+TGG | - | chr3_2:91458074-91458093 | Msa0437270:intron | 40.0% | |
| TCAATGAATGATCTCCAGGT+GGG | - | chr3_2:91458075-91458094 | Msa0437270:intron | 40.0% | |
| AATGTCAAATGAAACCCACC+TGG | + | chr3_2:91458092-91458111 | None:intergenic | 40.0% | |
| GGGTTTCATTTGACATTGCA+AGG | - | chr3_2:91458095-91458114 | Msa0437270:intron | 40.0% | |
| TAACGCTTTCTGTCAAGCAA+AGG | + | chr3_2:91458121-91458140 | None:intergenic | 40.0% | |
| ATCTTCAGCAACTTGAAGTG+GGG | + | chr3_2:91458188-91458207 | None:intergenic | 40.0% | |
| GATCTTCAGCAACTTGAAGT+GGG | + | chr3_2:91458189-91458208 | None:intergenic | 40.0% | |
| TGATCTTCAGCAACTTGAAG+TGG | + | chr3_2:91458190-91458209 | None:intergenic | 40.0% | |
| TCAAGACACTATGTTAAGCC+AGG | - | chr3_2:91458207-91458226 | Msa0437270:intron | 40.0% | |
| !! | TTGCTGAAATCGCCATTTTC+TGG | + | chr3_2:91458373-91458392 | None:intergenic | 40.0% |
| TCATACCTTGTATCTCACAC+GGG | + | chr3_2:91458419-91458438 | None:intergenic | 40.0% | |
| CTTAAAGCACAGGAAGTAAC+TGG | + | chr3_2:91458465-91458484 | None:intergenic | 40.0% | |
| !! | AACATTTTCTAAGGATGGCC+AGG | + | chr3_2:91458490-91458509 | None:intergenic | 40.0% |
| !! | GTAATATCTTTTCGGGAGAC+GGG | + | chr3_2:91458621-91458640 | None:intergenic | 40.0% |
| !! | GGTAATATCTTTTCGGGAGA+CGG | + | chr3_2:91458622-91458641 | None:intergenic | 40.0% |
| AAAATATCGGTAAGTAGGGG+AGG | + | chr3_2:91458665-91458684 | None:intergenic | 40.0% | |
| TTATTTGGAGGTAACCGGAT+TGG | - | chr3_2:91458683-91458702 | Msa0437270:CDS | 40.0% | |
| TATTTGGAGGTAACCGGATT+GGG | - | chr3_2:91458684-91458703 | Msa0437270:CDS | 40.0% | |
| ACAACAAGTCAGACCAGAAT+GGG | + | chr3_2:91458844-91458863 | None:intergenic | 40.0% | |
| TCCTTCAGATATGAATAGCG+CGG | + | chr3_2:91458886-91458905 | None:intergenic | 40.0% | |
| AGTCACAGTTGCAGAAATAC+AGG | - | chr3_2:91458947-91458966 | Msa0437270:intron | 40.0% | |
| ACAGTTGCAGAAATACAGGA+GGG | - | chr3_2:91458951-91458970 | Msa0437270:intron | 40.0% | |
| ! | GGATACAGGATCTTATTTGC+TGG | + | chr3_2:91459070-91459089 | None:intergenic | 40.0% |
| TTTGATCCCCATTTGTCTCT+AGG | - | chr3_2:91459106-91459125 | Msa0437270:CDS | 40.0% | |
| TGCCATTCCTAGAGACAAAT+GGG | + | chr3_2:91459116-91459135 | None:intergenic | 40.0% | |
| ATGCCATTCCTAGAGACAAA+TGG | + | chr3_2:91459117-91459136 | None:intergenic | 40.0% | |
| CCATATTCAGCAACTAATGC+TGG | + | chr3_2:91459269-91459288 | None:intergenic | 40.0% | |
| CCAGCATTAGTTGCTGAATA+TGG | - | chr3_2:91459266-91459285 | Msa0437270:five_prime_UTR | 40.0% | |
| GAAGAATGTCGAGTACGAAG+AGG | - | chr3_2:91453525-91453544 | Msa0437270:three_prime_UTR | 45.0% | |
| TAGCAGTAGCAAAACCCCAA+AGG | - | chr3_2:91453556-91453575 | Msa0437270:three_prime_UTR | 45.0% | |
| AGCAACAACGCTTTCCTTTG+GGG | + | chr3_2:91453573-91453592 | None:intergenic | 45.0% | |
| CAGCAACAACGCTTTCCTTT+GGG | + | chr3_2:91453574-91453593 | None:intergenic | 45.0% | |
| TCAGCAACAACGCTTTCCTT+TGG | + | chr3_2:91453575-91453594 | None:intergenic | 45.0% | |
| !! | GAAAGCGTTGTTGCTGATTG+CGG | - | chr3_2:91453578-91453597 | Msa0437270:three_prime_UTR | 45.0% |
| ! | TGGGTTGTTGTTGTAGTTGG+TGG | - | chr3_2:91453777-91453796 | Msa0437270:intron | 45.0% |
| ! | CATGCTGGCATATAGCCTTA+CGG | - | chr3_2:91453942-91453961 | Msa0437270:intron | 45.0% |
| ! | CTTGGTAGTCATACACCGTA+AGG | + | chr3_2:91453960-91453979 | None:intergenic | 45.0% |
| CTTACGGTGTATGACTACCA+AGG | - | chr3_2:91453958-91453977 | Msa0437270:intron | 45.0% | |
| TGTCCGACACGTATCCTATA+TGG | + | chr3_2:91454350-91454369 | None:intergenic | 45.0% | |
| !! | ATGGATGATGGTAATGGGAG+AGG | - | chr3_2:91454652-91454671 | Msa0437270:intron | 45.0% |
| ! | AATGGGAGAGGAGACTCTTT+TGG | - | chr3_2:91454664-91454683 | Msa0437270:intron | 45.0% |
| ATCCGGGCTTCATAGACTAT+AGG | - | chr3_2:91455004-91455023 | Msa0437270:CDS | 45.0% | |
| TCATAGACTATAGGCCGAGT+AGG | - | chr3_2:91455013-91455032 | Msa0437270:CDS | 45.0% | |
| GACTCGTTAACCATCCTACT+CGG | + | chr3_2:91455030-91455049 | None:intergenic | 45.0% | |
| AGTAGGATGGTTAACGAGTC+AGG | - | chr3_2:91455030-91455049 | Msa0437270:CDS | 45.0% | |
| ! | CTGTTAGCTCTTCTTGATCG+GGG | - | chr3_2:91455372-91455391 | Msa0437270:CDS | 45.0% |
| GATTGTATAGGAAGGGCAAC+AGG | + | chr3_2:91455445-91455464 | None:intergenic | 45.0% | |
| !! | ATGTGTCACTTCCTGGTGAA+TGG | - | chr3_2:91456177-91456196 | Msa0437270:intron | 45.0% |
| ! | TTGATGGCTAACCAGAGTCA+GGG | - | chr3_2:91456278-91456297 | Msa0437270:intron | 45.0% |
| CTTAAGACTTTCCCTGACTC+TGG | + | chr3_2:91456292-91456311 | None:intergenic | 45.0% | |
| CAGAGTCAGGGAAAGTCTTA+AGG | - | chr3_2:91456290-91456309 | Msa0437270:intron | 45.0% | |
| GAAGTCCTCACATAGTCACA+TGG | - | chr3_2:91456322-91456341 | Msa0437270:intron | 45.0% | |
| ! | GACTCGAACTCACATCCTTT+TGG | - | chr3_2:91456352-91456371 | Msa0437270:intron | 45.0% |
| ! | CGAGTTGAATACCTACCAAC+TGG | - | chr3_2:91456379-91456398 | Msa0437270:intron | 45.0% |
| CGAAAATTGGTCCAGTTGGT+AGG | + | chr3_2:91456393-91456412 | None:intergenic | 45.0% | |
| CCTACGAAAATTGGTCCAGT+TGG | + | chr3_2:91456397-91456416 | None:intergenic | 45.0% | |
| ! | CCAACTGGACCAATTTTCGT+AGG | - | chr3_2:91456394-91456413 | Msa0437270:intron | 45.0% |
| GTGGCAAAGCCTACGAAAAT+TGG | + | chr3_2:91456406-91456425 | None:intergenic | 45.0% | |
| ACCGATGGTTCTTTCTTCCT+AGG | - | chr3_2:91456660-91456679 | Msa0437270:intron | 45.0% | |
| !! | TGGAGCATGATGGGTTGTTA+TGG | + | chr3_2:91456766-91456785 | None:intergenic | 45.0% |
| CTTCTGACATGGAGCATGAT+GGG | + | chr3_2:91456775-91456794 | None:intergenic | 45.0% | |
| TCTTCTGACATGGAGCATGA+TGG | + | chr3_2:91456776-91456795 | None:intergenic | 45.0% | |
| GTGCACATGTTCACTGAGAA+CGG | - | chr3_2:91456875-91456894 | Msa0437270:intron | 45.0% | |
| TGCACATGTTCACTGAGAAC+GGG | - | chr3_2:91456876-91456895 | Msa0437270:intron | 45.0% | |
| CAGTCAGAATGGTTTCACAG+GGG | - | chr3_2:91456933-91456952 | Msa0437270:intron | 45.0% | |
| GGTTTCACAGGGGAAAAAGA+AGG | - | chr3_2:91456943-91456962 | Msa0437270:intron | 45.0% | |
| CGATTCGTTGCAGACTTCTT+TGG | + | chr3_2:91457265-91457284 | None:intergenic | 45.0% | |
| ACACAGAAAGCTCATATCGC+AGG | - | chr3_2:91457404-91457423 | Msa0437270:intron | 45.0% | |
| GATAACACAGTTCCTCCTTG+TGG | - | chr3_2:91457469-91457488 | Msa0437270:intron | 45.0% | |
| ! | ACAGTTCCTCCTTGTGGTTT+TGG | - | chr3_2:91457475-91457494 | Msa0437270:intron | 45.0% |
| AAAGAGCCAAAACCACAAGG+AGG | + | chr3_2:91457484-91457503 | None:intergenic | 45.0% | |
| TGGAAAGAGCCAAAACCACA+AGG | + | chr3_2:91457487-91457506 | None:intergenic | 45.0% | |
| TGGTTGGGTGAAAGATAACC+AGG | - | chr3_2:91457648-91457667 | Msa0437270:intron | 45.0% | |
| GTACTGGAGACTAGGACAAT+AGG | + | chr3_2:91457674-91457693 | None:intergenic | 45.0% | |
| !! | GAGGACATAGTAGCTCTGAA+GGG | + | chr3_2:91457756-91457775 | None:intergenic | 45.0% |
| !! | AGAGGACATAGTAGCTCTGA+AGG | + | chr3_2:91457757-91457776 | None:intergenic | 45.0% |
| !! | TTAAGCCAGGTTGATGACAG+TGG | - | chr3_2:91458220-91458239 | Msa0437270:intron | 45.0% |
| ATTTGGAGGTAACCGGATTG+GGG | - | chr3_2:91458685-91458704 | Msa0437270:CDS | 45.0% | |
| CTCTATCACTATCCCCAATC+CGG | + | chr3_2:91458700-91458719 | None:intergenic | 45.0% | |
| GACAACAAGTCAGACCAGAA+TGG | + | chr3_2:91458845-91458864 | None:intergenic | 45.0% | |
| ACCGCGCTATTCATATCTGA+AGG | - | chr3_2:91458882-91458901 | Msa0437270:intron | 45.0% | |
| CACAGTTGCAGAAATACAGG+AGG | - | chr3_2:91458950-91458969 | Msa0437270:intron | 45.0% | |
| CAGAAATACAGGAGGGTTGT+CGG | - | chr3_2:91458958-91458977 | Msa0437270:intron | 45.0% | |
| ! | TCCCCATTTGTCTCTAGGAA+TGG | - | chr3_2:91459111-91459130 | Msa0437270:CDS | 45.0% |
| GCCATTCCTAGAGACAAATG+GGG | + | chr3_2:91459115-91459134 | None:intergenic | 45.0% | |
| !! | TAAAAGATATATATATTTAA+GGG | + | chr3_2:91455957-91455976 | None:intergenic | 5.0% |
| !! | ATAAAAGATATATATATTTA+AGG | + | chr3_2:91455958-91455977 | None:intergenic | 5.0% |
| !!! | TTTTATTTTATAACAATTAT+TGG | - | chr3_2:91457895-91457914 | Msa0437270:intron | 5.0% |
| TGAGAGATGCTATTGGGACG+AGG | + | chr3_2:91453638-91453657 | None:intergenic | 50.0% | |
| CGTCCCAATAGCATCTCTCA+TGG | - | chr3_2:91453638-91453657 | Msa0437270:exon | 50.0% | |
| CGGTGTATGACTACCAAGGT+TGG | - | chr3_2:91453962-91453981 | Msa0437270:intron | 50.0% | |
| CTGGGCTTCGTAGCCTATAA+TGG | + | chr3_2:91454304-91454323 | None:intergenic | 50.0% | |
| TCACACCCACACCATGTATC+CGG | - | chr3_2:91454987-91455006 | Msa0437270:CDS | 50.0% | |
| GTCTATGAAGCCCGGATACA+TGG | + | chr3_2:91455001-91455020 | None:intergenic | 50.0% | |
| GGCCTATAGTCTATGAAGCC+CGG | + | chr3_2:91455009-91455028 | None:intergenic | 50.0% | |
| AGACTATAGGCCGAGTAGGA+TGG | - | chr3_2:91455017-91455036 | Msa0437270:CDS | 50.0% | |
| ! | TCTTTGAAGGGGGGGAAGTT+AGG | + | chr3_2:91455110-91455129 | None:intergenic | 50.0% |
| GGAAGTGACACATGTCCCAA+AGG | + | chr3_2:91456170-91456189 | None:intergenic | 50.0% | |
| !! | TTGGGACATGTGTCACTTCC+TGG | - | chr3_2:91456170-91456189 | Msa0437270:intron | 50.0% |
| ! | CTTGATGGCTAACCAGAGTC+AGG | - | chr3_2:91456277-91456296 | Msa0437270:intron | 50.0% |
| ACTGCCCATGTGACTATGTG+AGG | + | chr3_2:91456330-91456349 | None:intergenic | 50.0% | |
| GCACATGTTCACTGAGAACG+GGG | - | chr3_2:91456877-91456896 | Msa0437270:intron | 50.0% | |
| GAGAACGGGGAATTTCCATC+TGG | - | chr3_2:91456890-91456909 | Msa0437270:intron | 50.0% | |
| TAAGAGGTCTTCGGACCCAT+TGG | + | chr3_2:91456975-91456994 | None:intergenic | 50.0% | |
| CCTTGTCCCTTGACTTTGCT+CGG | + | chr3_2:91457039-91457058 | None:intergenic | 50.0% | |
| GCAAAGTCAAGGGACAAGGA+TGG | - | chr3_2:91457040-91457059 | Msa0437270:intron | 50.0% | |
| CTGTCTATCAGGGCTTGCAA+TGG | - | chr3_2:91457172-91457191 | Msa0437270:CDS | 50.0% | |
| CTTGACCACTGTCATCAACC+TGG | + | chr3_2:91458228-91458247 | None:intergenic | 50.0% | |
| ! | CTTCCTGTGCTTTAAGCACC+TGG | - | chr3_2:91458469-91458488 | Msa0437270:intron | 50.0% |
| ! | CGGATTGGGGATAGTGATAG+AGG | - | chr3_2:91458698-91458717 | Msa0437270:CDS | 50.0% |
| TCGTGAGCAGCAGAGATACT+TGG | - | chr3_2:91458924-91458943 | Msa0437270:intron | 50.0% | |
| TCCAGTGTTATCCGAGCGAA+TGG | - | chr3_2:91458981-91459000 | Msa0437270:intron | 50.0% | |
| ACCATTCGCTCGGATAACAC+TGG | + | chr3_2:91458985-91459004 | None:intergenic | 50.0% | |
| GAGAGAGTAGACCATTCGCT+CGG | + | chr3_2:91458995-91459014 | None:intergenic | 50.0% | |
| GAGCGAATGGTCTACTCTCT+CGG | - | chr3_2:91458994-91459013 | Msa0437270:intron | 50.0% | |
| AAGATCCTGTATCCAGCAGC+TGG | - | chr3_2:91459076-91459095 | Msa0437270:CDS | 50.0% | |
| TCAAATTCAGCTCCAGCTGC+TGG | + | chr3_2:91459091-91459110 | None:intergenic | 50.0% | |
| !! | GGAAAGCGTCGAAGCTCTTG+TGG | - | chr3_2:91453599-91453618 | Msa0437270:three_prime_UTR | 55.0% |
| CACACCCACACCATGTATCC+GGG | - | chr3_2:91454988-91455007 | Msa0437270:CDS | 55.0% | |
| GAAGCCCGGATACATGGTGT+GGG | + | chr3_2:91454995-91455014 | None:intergenic | 55.0% | |
| TGAAGCCCGGATACATGGTG+TGG | + | chr3_2:91454996-91455015 | None:intergenic | 55.0% | |
| TAGCTCTTCTTGATCGGGGC+TGG | - | chr3_2:91455376-91455395 | Msa0437270:CDS | 55.0% | |
| CCGAGCAAAGTCAAGGGACA+AGG | - | chr3_2:91457036-91457055 | Msa0437270:intron | 55.0% | |
| GGAGACTAGGACAATAGGCC+TGG | + | chr3_2:91457669-91457688 | None:intergenic | 55.0% | |
| GGGATCCCGTGTGAGATACA+AGG | - | chr3_2:91458411-91458430 | Msa0437270:intron | 55.0% | |
| TGGCCAGGTGCTTAAAGCAC+AGG | + | chr3_2:91458475-91458494 | None:intergenic | 55.0% | |
| ! | CGGGAGACGGGAGTATGAAA+AGG | + | chr3_2:91458609-91458628 | None:intergenic | 55.0% |
| GATCGGGGCTGGAGAAGATC+TGG | - | chr3_2:91455387-91455406 | Msa0437270:CDS | 60.0% | |
| CAGCTCCAGCTGCTGGATAC+AGG | + | chr3_2:91459084-91459103 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 91453286 | 91459376 | 91453286 | ID=Msa0437270;Name=Msa0437270 |
| chr3_2 | mRNA | 91453286 | 91459376 | 91453286 | ID=Msa0437270-mRNA-1;Parent=Msa0437270;Name=Msa0437270-mRNA-1;_AED=0.01;_eAED=0.01;_QI=244|1|1|1|1|1|6|356|626 |
| chr3_2 | exon | 91453286 | 91453758 | 91453286 | ID=Msa0437270-mRNA-1:exon:27318;Parent=Msa0437270-mRNA-1 |
| chr3_2 | exon | 91454230 | 91454569 | 91454230 | ID=Msa0437270-mRNA-1:exon:27317;Parent=Msa0437270-mRNA-1 |
| chr3_2 | exon | 91454877 | 91455980 | 91454877 | ID=Msa0437270-mRNA-1:exon:27316;Parent=Msa0437270-mRNA-1 |
| chr3_2 | exon | 91457133 | 91457283 | 91457133 | ID=Msa0437270-mRNA-1:exon:27315;Parent=Msa0437270-mRNA-1 |
| chr3_2 | exon | 91458683 | 91458721 | 91458683 | ID=Msa0437270-mRNA-1:exon:27314;Parent=Msa0437270-mRNA-1 |
| chr3_2 | exon | 91459003 | 91459376 | 91459003 | ID=Msa0437270-mRNA-1:exon:27313;Parent=Msa0437270-mRNA-1 |
| chr3_2 | five_prime_UTR | 91459133 | 91459376 | 91459133 | ID=Msa0437270-mRNA-1:five_prime_utr;Parent=Msa0437270-mRNA-1 |
| chr3_2 | CDS | 91459003 | 91459132 | 91459003 | ID=Msa0437270-mRNA-1:cds;Parent=Msa0437270-mRNA-1 |
| chr3_2 | CDS | 91458683 | 91458721 | 91458683 | ID=Msa0437270-mRNA-1:cds;Parent=Msa0437270-mRNA-1 |
| chr3_2 | CDS | 91457133 | 91457283 | 91457133 | ID=Msa0437270-mRNA-1:cds;Parent=Msa0437270-mRNA-1 |
| chr3_2 | CDS | 91454877 | 91455980 | 91454877 | ID=Msa0437270-mRNA-1:cds;Parent=Msa0437270-mRNA-1 |
| chr3_2 | CDS | 91454230 | 91454569 | 91454230 | ID=Msa0437270-mRNA-1:cds;Parent=Msa0437270-mRNA-1 |
| chr3_2 | CDS | 91453642 | 91453758 | 91453642 | ID=Msa0437270-mRNA-1:cds;Parent=Msa0437270-mRNA-1 |
| chr3_2 | three_prime_UTR | 91453286 | 91453641 | 91453286 | ID=Msa0437270-mRNA-1:three_prime_utr;Parent=Msa0437270-mRNA-1 |
| Gene Sequence |
| Protein sequence |
