Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1136880 | XP_013449694.1 | 99.111 | 450 | 3 | 1 | 1 | 450 | 1 | 449 | 0.0 | 909 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1136880 | sp|Q9ZT91|EFTM_ARATH | 85.463 | 454 | 57 | 5 | 4 | 450 | 3 | 454 | 0.0 | 748 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1136880 | A0A072U201 | 99.111 | 450 | 3 | 1 | 1 | 450 | 1 | 449 | 0.0 | 909 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002430 | Msa1136880 | 0.832812 | 7.633988e-56 | -8.615850e-47 |
| Msa0027610 | Msa1136880 | -0.814270 | 1.678340e-51 | -8.615850e-47 |
| Msa0071760 | Msa1136880 | 0.831332 | 1.772309e-55 | -8.615850e-47 |
| Msa0075370 | Msa1136880 | -0.811697 | 6.151037e-51 | -8.615850e-47 |
| Msa0089540 | Msa1136880 | 0.805981 | 1.026818e-49 | -8.615850e-47 |
| Msa0116600 | Msa1136880 | 0.802659 | 5.050178e-49 | -8.615850e-47 |
| Msa0116690 | Msa1136880 | 0.808160 | 3.549209e-50 | -8.615850e-47 |
| Msa0602900 | Msa1136880 | 0.852194 | 5.417236e-61 | -8.615850e-47 |
| Msa0605890 | Msa1136880 | 0.808908 | 2.458160e-50 | -8.615850e-47 |
| Msa0643960 | Msa1136880 | 0.854450 | 1.221404e-61 | -8.615850e-47 |
| Msa0648620 | Msa1136880 | 0.895266 | 1.128232e-75 | -8.615850e-47 |
| Msa0648670 | Msa1136880 | 0.904075 | 1.792436e-79 | -8.615850e-47 |
| Msa0650370 | Msa1136880 | 0.813421 | 2.581304e-51 | -8.615850e-47 |
| Msa0686660 | Msa1136880 | 0.816812 | 4.559470e-52 | -8.615850e-47 |
| Msa0694400 | Msa1136880 | 0.801707 | 7.928907e-49 | -8.615850e-47 |
| Msa0708630 | Msa1136880 | 0.818893 | 1.545699e-52 | -8.615850e-47 |
| Msa0728870 | Msa1136880 | 0.816298 | 5.943037e-52 | -8.615850e-47 |
| Msa0790450 | Msa1136880 | 0.854855 | 9.319498e-62 | -8.615850e-47 |
| Msa0812240 | Msa1136880 | 0.809919 | 1.491048e-50 | -8.615850e-47 |
| Msa0834220 | Msa1136880 | 0.811100 | 8.287338e-51 | -8.615850e-47 |
| Msa0123310 | Msa1136880 | -0.813926 | 1.998998e-51 | -8.615850e-47 |
| Msa0132460 | Msa1136880 | 0.818150 | 2.278228e-52 | -8.615850e-47 |
| Msa0136400 | Msa1136880 | 0.814137 | 1.795640e-51 | -8.615850e-47 |
| Msa0167800 | Msa1136880 | -0.807974 | 3.888999e-50 | -8.615850e-47 |
| Msa0182050 | Msa1136880 | 0.817092 | 3.945765e-52 | -8.615850e-47 |
| Msa0182100 | Msa1136880 | 0.820085 | 8.262092e-53 | -8.615850e-47 |
| Msa0188740 | Msa1136880 | 0.848047 | 7.862676e-60 | -8.615850e-47 |
| Msa0192300 | Msa1136880 | 0.835898 | 1.283474e-56 | -8.615850e-47 |
| Msa0195030 | Msa1136880 | 0.810632 | 1.046709e-50 | -8.615850e-47 |
| Msa0237180 | Msa1136880 | 0.824850 | 6.455601e-54 | -8.615850e-47 |
| Msa0370350 | Msa1136880 | -0.810667 | 1.028496e-50 | -8.615850e-47 |
| Msa0374270 | Msa1136880 | 0.802099 | 6.587968e-49 | -8.615850e-47 |
| Msa0377370 | Msa1136880 | 0.841205 | 5.471693e-58 | -8.615850e-47 |
| Msa0382960 | Msa1136880 | 0.809618 | 1.731063e-50 | -8.615850e-47 |
| Msa0417850 | Msa1136880 | -0.812285 | 4.577421e-51 | -8.615850e-47 |
| Msa0426090 | Msa1136880 | 0.813777 | 2.155973e-51 | -8.615850e-47 |
| Msa0426250 | Msa1136880 | 0.814066 | 1.861163e-51 | -8.615850e-47 |
| Msa0432750 | Msa1136880 | 0.868889 | 4.666330e-66 | -8.615850e-47 |
| Msa0433060 | Msa1136880 | 0.844533 | 7.129570e-59 | -8.615850e-47 |
| Msa0469740 | Msa1136880 | 0.800793 | 1.219958e-48 | -8.615850e-47 |
| Msa0472480 | Msa1136880 | 0.815419 | 9.334831e-52 | -8.615850e-47 |
| Msa0479980 | Msa1136880 | 0.870548 | 1.342846e-66 | -8.615850e-47 |
| Msa1004780 | Msa1136880 | 0.809443 | 1.887585e-50 | -8.615850e-47 |
| Msa1025200 | Msa1136880 | 0.826016 | 3.418002e-54 | -8.615850e-47 |
| Msa1025220 | Msa1136880 | 0.822412 | 2.401675e-53 | -8.615850e-47 |
| Msa1037080 | Msa1136880 | 0.810117 | 1.352066e-50 | -8.615850e-47 |
| Msa1047020 | Msa1136880 | 0.804501 | 2.096018e-49 | -8.615850e-47 |
| Msa1070810 | Msa1136880 | 0.844854 | 5.841718e-59 | -8.615850e-47 |
| Msa1085850 | Msa1136880 | 0.864185 | 1.458179e-64 | -8.615850e-47 |
| Msa1106870 | Msa1136880 | 0.816241 | 6.119181e-52 | -8.615850e-47 |
| Msa0270160 | Msa1136880 | 0.821881 | 3.188841e-53 | -8.615850e-47 |
| Msa0281370 | Msa1136880 | 0.808908 | 2.458160e-50 | -8.615850e-47 |
| Msa0301250 | Msa1136880 | 0.830359 | 3.070771e-55 | -8.615850e-47 |
| Msa0313060 | Msa1136880 | 0.845237 | 4.603994e-59 | -8.615850e-47 |
| Msa0315660 | Msa1136880 | 0.820469 | 6.746001e-53 | -8.615850e-47 |
| Msa0340560 | Msa1136880 | 0.854513 | 1.170530e-61 | -8.615850e-47 |
| Msa1116940 | Msa1136880 | 0.959514 | 1.585634e-117 | -8.615850e-47 |
| Msa1136880 | Msa1136980 | 0.904485 | 1.168097e-79 | -8.615850e-47 |
| Msa1136880 | Msa1158630 | 0.848609 | 5.494312e-60 | -8.615850e-47 |
| Msa1136880 | Msa1165210 | 0.803915 | 2.775267e-49 | -8.615850e-47 |
| Msa1136880 | Msa1207200 | 0.801175 | 1.019443e-48 | -8.615850e-47 |
| Msa1136880 | Msa1211820 | 0.810180 | 1.310465e-50 | -8.615850e-47 |
| Msa1136880 | Msa1213850 | 0.809794 | 1.586388e-50 | -8.615850e-47 |
| Msa1136880 | Msa1219760 | 0.821134 | 4.743854e-53 | -8.615850e-47 |
| Msa1136880 | Msa1235950 | 0.860936 | 1.458937e-63 | -8.615850e-47 |
| Msa1136880 | Msa1235980 | 0.856780 | 2.553037e-62 | -8.615850e-47 |
| Msa1136880 | Msa1237040 | 0.889705 | 1.906224e-73 | -8.615850e-47 |
| Msa1136880 | Msa1257450 | 0.820513 | 6.591964e-53 | -8.615850e-47 |
| Msa1136880 | Msa1278130 | 0.836017 | 1.196843e-56 | -8.615850e-47 |
| Msa1136880 | Msa1284060 | 0.815026 | 1.141345e-51 | -8.615850e-47 |
| Msa1136880 | Msa1305260 | 0.806629 | 7.495860e-50 | -8.615850e-47 |
| Msa1136880 | Msa1316100 | 0.828228 | 1.010388e-54 | -8.615850e-47 |
| Msa1136880 | Msa1317390 | 0.866631 | 2.475629e-65 | -8.615850e-47 |
| Msa1136880 | Msa1332230 | 0.838680 | 2.490473e-57 | -8.615850e-47 |
| Msa1136880 | Msa1341780 | 0.887247 | 1.687103e-72 | -8.615850e-47 |
| Msa1136880 | Msa1344160 | 0.815689 | 8.130172e-52 | -8.615850e-47 |
| Msa1136880 | Msa1344190 | 0.811075 | 8.392173e-51 | -8.615850e-47 |
| Msa1136880 | Msa1371410 | 0.862316 | 5.524098e-64 | -8.615850e-47 |
| Msa1136880 | Msa1398280 | 0.800025 | 1.749140e-48 | -8.615850e-47 |
| Msa1136880 | Msa1415620 | 0.868632 | 5.650756e-66 | -8.615850e-47 |
| Msa1136880 | Msa1421510 | 0.821216 | 4.542705e-53 | -8.615850e-47 |
| Msa1136880 | Msa1433590 | 0.851290 | 9.774717e-61 | -8.615850e-47 |
| Msa1136880 | Msa1444240 | 0.803620 | 3.195194e-49 | -8.615850e-47 |
| Msa1136880 | Msa1450560 | 0.852577 | 4.214376e-61 | -8.615850e-47 |
| Msa1136880 | Msa1453530 | 0.815341 | 9.715681e-52 | -8.615850e-47 |
| Msa1136880 | Msa1456160 | 0.826493 | 2.631808e-54 | -8.615850e-47 |
| Msa1136880 | Msa1456400 | 0.804197 | 2.424543e-49 | -8.615850e-47 |
| Msa1136880 | Msa1465700 | 0.856199 | 3.780740e-62 | -8.615850e-47 |
| Msa0485220 | Msa1136880 | 0.810017 | 1.420470e-50 | -8.615850e-47 |
| Msa0524680 | Msa1136880 | 0.841097 | 5.842354e-58 | -8.615850e-47 |
| Msa0528750 | Msa1136880 | 0.815385 | 9.499968e-52 | -8.615850e-47 |
| Msa0528820 | Msa1136880 | 0.829307 | 5.539275e-55 | -8.615850e-47 |
| Msa0547920 | Msa1136880 | 0.846956 | 1.567999e-59 | -8.615850e-47 |
| Msa0550490 | Msa1136880 | 0.825497 | 4.538578e-54 | -8.615850e-47 |
| Msa0554210 | Msa1136880 | 0.843510 | 1.340834e-58 | -8.615850e-47 |
| Msa0560740 | Msa1136880 | 0.801209 | 1.003236e-48 | -8.615850e-47 |
| Msa0573550 | Msa1136880 | 0.802916 | 4.469505e-49 | -8.615850e-47 |
| Msa0865790 | Msa1136880 | 0.809806 | 1.577507e-50 | -8.615850e-47 |
| Msa0929700 | Msa1136880 | 0.821090 | 4.856097e-53 | -8.615850e-47 |
| Msa0930100 | Msa1136880 | 0.812996 | 3.200590e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1136880 | MtrunA17_Chr7g0259481 | 99.111 | 450 | 3 | 1 | 1 | 450 | 1 | 449 | 0.0 | 909 |
| Msa1136880 | MtrunA17_Chr3g0116821 | 61.039 | 462 | 145 | 7 | 5 | 449 | 45 | 488 | 1.79e-175 | 500 |
| Msa1136880 | MtrunA17_Chr2g0287231 | 90.233 | 215 | 21 | 0 | 62 | 276 | 14 | 228 | 4.66e-143 | 408 |
| Msa1136880 | MtrunA17_Chr3g0114371 | 66.524 | 233 | 55 | 3 | 219 | 450 | 63 | 273 | 3.30e-98 | 295 |
| Msa1136880 | MtrunA17_Chr3g0114371 | 77.612 | 67 | 11 | 1 | 55 | 121 | 1 | 63 | 4.48e-18 | 84.0 |
| Msa1136880 | MtrunA17_Chr2g0287241 | 75.000 | 188 | 44 | 2 | 265 | 450 | 19 | 205 | 1.37e-96 | 289 |
| Msa1136880 | MtrunA17_Chr1g0200121 | 30.137 | 438 | 246 | 14 | 60 | 448 | 3 | 429 | 7.02e-46 | 165 |
| Msa1136880 | MtrunA17_Chr1g0200071 | 30.137 | 438 | 246 | 14 | 60 | 448 | 3 | 429 | 8.03e-46 | 164 |
| Msa1136880 | MtrunA17_Chr1g0200091 | 30.137 | 438 | 246 | 14 | 60 | 448 | 3 | 429 | 8.03e-46 | 164 |
| Msa1136880 | MtrunA17_Chr6g0458111 | 30.137 | 438 | 246 | 14 | 60 | 448 | 3 | 429 | 8.91e-46 | 164 |
| Msa1136880 | MtrunA17_Chr6g0458091 | 30.137 | 438 | 246 | 14 | 60 | 448 | 3 | 429 | 8.91e-46 | 164 |
| Msa1136880 | MtrunA17_Chr4g0005781 | 29.909 | 438 | 247 | 14 | 60 | 448 | 3 | 429 | 2.09e-45 | 163 |
| Msa1136880 | MtrunA17_Chr1g0193591 | 30.345 | 435 | 243 | 14 | 60 | 445 | 3 | 426 | 3.31e-42 | 155 |
| Msa1136880 | MtrunA17_Chr1g0150331 | 31.075 | 428 | 232 | 17 | 60 | 448 | 3 | 406 | 1.54e-40 | 150 |
| Msa1136880 | MtrunA17_Chr1g0156421 | 28.899 | 436 | 256 | 14 | 59 | 448 | 2 | 429 | 9.08e-38 | 143 |
| Msa1136880 | MtrunA17_Chr1g0204031 | 29.977 | 437 | 247 | 17 | 58 | 448 | 1 | 424 | 1.14e-37 | 146 |
| Msa1136880 | MtrunA17_Chr8g0380091 | 29.545 | 440 | 248 | 16 | 61 | 449 | 272 | 700 | 2.74e-37 | 144 |
| Msa1136880 | MtrunA17_Chr8g0340771 | 27.945 | 433 | 254 | 12 | 65 | 448 | 8 | 431 | 3.30e-33 | 130 |
| Msa1136880 | MtrunA17_Chr8g0336511 | 31.153 | 321 | 182 | 9 | 59 | 348 | 67 | 379 | 3.53e-33 | 129 |
| Msa1136880 | MtrunA17_Chr5g0415391 | 27.177 | 379 | 229 | 15 | 102 | 445 | 22 | 388 | 6.46e-28 | 114 |
| Msa1136880 | MtrunA17_Chr6g0483121 | 27.765 | 443 | 244 | 18 | 62 | 446 | 89 | 513 | 1.00e-26 | 112 |
| Msa1136880 | MtrunA17_Chr8g0392641 | 27.455 | 448 | 239 | 18 | 62 | 446 | 144 | 568 | 1.58e-26 | 112 |
| Msa1136880 | MtrunA17_Chr2g0318291 | 32.828 | 198 | 106 | 6 | 62 | 235 | 7 | 201 | 1.77e-25 | 103 |
| Msa1136880 | MtrunA17_Chr1g0196251 | 28.024 | 339 | 187 | 10 | 62 | 373 | 6 | 314 | 2.20e-22 | 98.6 |
| Msa1136880 | MtrunA17_Chr4g0040791 | 30.100 | 299 | 187 | 9 | 17 | 300 | 4 | 295 | 2.32e-21 | 97.1 |
| Msa1136880 | MtrunA17_Chr1g0204041 | 31.737 | 167 | 86 | 3 | 65 | 206 | 8 | 171 | 7.03e-19 | 84.0 |
| Msa1136880 | MtrunA17_Chr2g0319341 | 28.902 | 346 | 183 | 16 | 144 | 445 | 1 | 327 | 1.07e-18 | 88.2 |
| Msa1136880 | MtrunA17_Chr1g0173551 | 26.842 | 380 | 232 | 16 | 2 | 357 | 16 | 373 | 1.60e-17 | 85.1 |
| Msa1136880 | MtrunA17_Chr2g0315521 | 27.083 | 288 | 125 | 11 | 65 | 299 | 33 | 288 | 2.02e-15 | 78.2 |
| Msa1136880 | MtrunA17_Chr2g0312061 | 26.207 | 290 | 125 | 11 | 65 | 299 | 33 | 288 | 3.25e-15 | 77.4 |
| Msa1136880 | MtrunA17_Chr8g0340371 | 31.169 | 154 | 85 | 3 | 60 | 192 | 3 | 156 | 4.11e-15 | 74.7 |
| Msa1136880 | MtrunA17_Chr1g0156411 | 31.159 | 138 | 73 | 3 | 65 | 180 | 12 | 149 | 7.36e-14 | 68.9 |
| Msa1136880 | MtrunA17_Chr2g0298371 | 25.507 | 345 | 175 | 15 | 144 | 443 | 1 | 308 | 1.18e-13 | 71.6 |
| Msa1136880 | MtrunA17_Chr3g0130991 | 28.571 | 245 | 142 | 8 | 66 | 301 | 85 | 305 | 7.34e-13 | 70.9 |
| Msa1136880 | MtrunA17_Chr2g0312621 | 29.386 | 228 | 138 | 6 | 70 | 297 | 502 | 706 | 8.55e-12 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1136880 | AT4G02930.1 | 85.463 | 454 | 57 | 5 | 4 | 450 | 3 | 454 | 0.0 | 748 |
| Msa1136880 | AT4G20360.1 | 61.339 | 463 | 150 | 7 | 4 | 449 | 25 | 475 | 1.27e-179 | 511 |
| Msa1136880 | AT4G20360.2 | 61.339 | 463 | 150 | 7 | 4 | 449 | 25 | 475 | 1.27e-179 | 511 |
| Msa1136880 | AT1G07920.1 | 30.046 | 436 | 249 | 13 | 60 | 448 | 3 | 429 | 4.34e-45 | 163 |
| Msa1136880 | AT1G07940.4 | 30.046 | 436 | 249 | 13 | 60 | 448 | 3 | 429 | 4.34e-45 | 163 |
| Msa1136880 | AT1G07940.1 | 30.046 | 436 | 249 | 13 | 60 | 448 | 3 | 429 | 4.34e-45 | 163 |
| Msa1136880 | AT1G07940.2 | 30.046 | 436 | 249 | 13 | 60 | 448 | 3 | 429 | 4.34e-45 | 163 |
| Msa1136880 | AT1G07940.3 | 30.046 | 436 | 249 | 13 | 60 | 448 | 3 | 429 | 4.34e-45 | 163 |
| Msa1136880 | AT5G60390.3 | 30.046 | 436 | 249 | 13 | 60 | 448 | 3 | 429 | 4.34e-45 | 163 |
| Msa1136880 | AT5G60390.1 | 30.046 | 436 | 249 | 13 | 60 | 448 | 3 | 429 | 4.34e-45 | 163 |
| Msa1136880 | AT5G60390.2 | 30.046 | 436 | 249 | 13 | 60 | 448 | 3 | 429 | 4.34e-45 | 163 |
| Msa1136880 | AT1G07930.1 | 30.046 | 436 | 249 | 13 | 60 | 448 | 3 | 429 | 4.34e-45 | 163 |
| Msa1136880 | AT5G10630.1 | 28.035 | 453 | 256 | 14 | 52 | 449 | 227 | 664 | 1.13e-33 | 134 |
| Msa1136880 | AT5G10630.5 | 28.035 | 453 | 256 | 14 | 52 | 449 | 228 | 665 | 1.14e-33 | 134 |
| Msa1136880 | AT5G10630.2 | 28.035 | 453 | 256 | 14 | 52 | 449 | 228 | 665 | 1.14e-33 | 134 |
| Msa1136880 | AT5G10630.4 | 28.035 | 453 | 256 | 14 | 52 | 449 | 303 | 740 | 1.24e-33 | 134 |
| Msa1136880 | AT5G10630.3 | 28.035 | 453 | 256 | 14 | 52 | 449 | 298 | 735 | 1.44e-33 | 134 |
| Msa1136880 | AT1G07930.2 | 33.721 | 258 | 135 | 7 | 60 | 286 | 3 | 255 | 1.08e-32 | 127 |
| Msa1136880 | AT1G18070.1 | 26.932 | 453 | 243 | 18 | 62 | 450 | 99 | 527 | 8.45e-29 | 119 |
| Msa1136880 | AT1G18070.2 | 26.932 | 453 | 243 | 18 | 62 | 450 | 99 | 527 | 8.45e-29 | 119 |
| Msa1136880 | AT1G18070.3 | 26.293 | 464 | 243 | 19 | 62 | 450 | 99 | 538 | 6.50e-26 | 110 |
| Msa1136880 | AT2G31060.2 | 31.707 | 287 | 167 | 9 | 66 | 333 | 61 | 337 | 1.93e-21 | 97.8 |
| Msa1136880 | AT2G31060.3 | 31.615 | 291 | 166 | 10 | 66 | 333 | 61 | 341 | 6.41e-21 | 96.3 |
| Msa1136880 | AT2G18720.1 | 25.672 | 335 | 188 | 11 | 65 | 353 | 39 | 358 | 1.33e-19 | 91.3 |
| Msa1136880 | AT2G18720.2 | 25.672 | 335 | 188 | 11 | 65 | 353 | 39 | 358 | 1.33e-19 | 91.3 |
| Msa1136880 | AT4G18330.2 | 26.549 | 339 | 182 | 12 | 65 | 353 | 40 | 361 | 2.16e-18 | 87.8 |
| Msa1136880 | AT4G18330.1 | 28.455 | 246 | 129 | 9 | 65 | 280 | 40 | 268 | 8.32e-16 | 78.2 |
| Msa1136880 | AT1G04170.2 | 26.374 | 273 | 146 | 8 | 65 | 299 | 34 | 289 | 4.88e-15 | 77.4 |
| Msa1136880 | AT1G04170.1 | 26.374 | 273 | 146 | 8 | 65 | 299 | 34 | 289 | 4.88e-15 | 77.4 |
| Msa1136880 | AT5G13650.1 | 25.150 | 334 | 223 | 11 | 29 | 350 | 48 | 366 | 7.70e-15 | 77.4 |
| Msa1136880 | AT2G18720.3 | 26.923 | 260 | 155 | 9 | 116 | 353 | 21 | 267 | 1.05e-14 | 75.9 |
| Msa1136880 | AT5G13650.2 | 25.926 | 297 | 194 | 10 | 66 | 350 | 85 | 367 | 2.35e-14 | 75.9 |
| Msa1136880 | AT5G08650.2 | 30.126 | 239 | 138 | 9 | 66 | 297 | 88 | 304 | 6.09e-13 | 71.2 |
| Msa1136880 | AT5G08650.1 | 30.126 | 239 | 138 | 9 | 66 | 297 | 88 | 304 | 7.67e-13 | 71.2 |
Find 126 sgRNAs with CRISPR-Local
Find 310 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTGCCAGAAAATGTTAAAA+TGG | 0.264941 | 7_4:+5614016 | Msa1136880:CDS |
| GAACAAGGAATCATCAAAAT+TGG | 0.282024 | 7_4:+5613226 | Msa1136880:CDS |
| CTGTGATATTCAGCGGTAAT+TGG | 0.282364 | 7_4:+5614458 | Msa1136880:three_prime_UTR |
| TGAAGATGTATTCTCAATTC+AGG | 0.301803 | 7_4:+5612817 | Msa1136880:CDS |
| GTTGTTAGAGCTTGTAGAAA+TGG | 0.312590 | 7_4:+5612465 | Msa1136880:CDS |
| AAACCTTACTTTAACATAAT+CGG | 0.325466 | 7_4:-5611027 | None:intergenic |
| CATGTTAACGTCGGAACTAT+TGG | 0.338907 | 7_4:+5610442 | Msa1136880:CDS |
| CAAGGATACCACCGTCCATT+TGG | 0.339574 | 7_4:-5612209 | None:intergenic |
| TTGACCTTCTACAAGTTTCC+AGG | 0.348867 | 7_4:+5612638 | Msa1136880:CDS |
| CCTCTGAAAACAACAGTTAC+TGG | 0.352891 | 7_4:+5613513 | Msa1136880:CDS |
| TGCTCTTTAGTTTGAGGCAT+TGG | 0.362727 | 7_4:-5612252 | None:intergenic |
| ATTCTTCCTCCTCCATTCCT+TGG | 0.362758 | 7_4:+5610301 | Msa1136880:CDS |
| AATGCTGAACCTCTAATGAT+AGG | 0.371728 | 7_4:-5612671 | None:intergenic |
| TGGTGATGAAGTTGAGGTTT+TGG | 0.379753 | 7_4:+5613246 | Msa1136880:CDS |
| AATCGTAGAAATGAAGGTTT+GGG | 0.382934 | 7_4:-5610141 | None:intergenic |
| AATTGAGAATACATCTTCAA+TGG | 0.404677 | 7_4:-5612813 | None:intergenic |
| TCAAGCTGGCGAACAGGGTC+AGG | 0.406901 | 7_4:-5612773 | None:intergenic |
| GTTTGAGGCATTGGTCCATC+AGG | 0.416974 | 7_4:-5612243 | None:intergenic |
| AGAATGTGCTCTTTAGTTTG+AGG | 0.417591 | 7_4:-5612258 | None:intergenic |
| CAAGGTACAAATGAGGAGAT+TGG | 0.421220 | 7_4:+5612704 | Msa1136880:CDS |
| ACAGTCTGAATCGTAATTGT+TGG | 0.421985 | 7_4:+5614637 | Msa1136880:three_prime_UTR |
| GTGAGAGGTGATTGAGAAAT+CGG | 0.424813 | 7_4:-5610264 | None:intergenic |
| CAGTCTGAATCGTAATTGTT+GGG | 0.425678 | 7_4:+5614638 | Msa1136880:three_prime_UTR |
| ATTTCTACGATTCGCTTCAA+TGG | 0.426643 | 7_4:+5610152 | Msa1136880:exon |
| TATCTCTGCTTCAAATCTCT+TGG | 0.432334 | 7_4:-5613892 | None:intergenic |
| CTTCCTCCTCCATTCCTTGG+TGG | 0.434975 | 7_4:+5610304 | Msa1136880:CDS |
| GAATCGTAGAAATGAAGGTT+TGG | 0.438409 | 7_4:-5610142 | None:intergenic |
| TCAATAGAATAGTCAGGTCC+TGG | 0.443825 | 7_4:-5614424 | None:intergenic |
| TTAACATAATCGGCGTGTCC+AGG | 0.444989 | 7_4:-5611017 | None:intergenic |
| CGACCTGGTTCAAGTGGAAC+AGG | 0.446547 | 7_4:-5614083 | None:intergenic |
| CACTAACTGCTGCAATCACC+AGG | 0.446674 | 7_4:+5610488 | Msa1136880:CDS |
| AAGGATACCACCGTCCATTT+GGG | 0.446849 | 7_4:-5612208 | None:intergenic |
| GATGATATCCCTATCATTAG+AGG | 0.453307 | 7_4:+5612662 | Msa1136880:CDS |
| ATGAAACGAGATTTAGAGAA+GGG | 0.454443 | 7_4:-5610077 | None:intergenic |
| CAAAATTGGTGATGAAGTTG+AGG | 0.481713 | 7_4:+5613240 | Msa1136880:CDS |
| TGAAGACATTCAACGTGGTC+AGG | 0.482701 | 7_4:+5613692 | Msa1136880:CDS |
| GATTACTGGAGCTGCCCAAA+TGG | 0.484093 | 7_4:+5612194 | Msa1136880:CDS |
| TGTGGAATTGAGAGGAGAAG+AGG | 0.484183 | 7_4:-5610224 | None:intergenic |
| AATGTTAAAATGGTTATGCC+TGG | 0.486949 | 7_4:+5614026 | Msa1136880:CDS |
| GCAAAGATTTGCCTTGAGAG+AGG | 0.493777 | 7_4:+5614302 | Msa1136880:CDS |
| GAAGCGAATCGTAGAAATGA+AGG | 0.496889 | 7_4:-5610147 | None:intergenic |
| AAATGAGGAGATTGGAAGAA+AGG | 0.499059 | 7_4:+5612712 | Msa1136880:CDS |
| AAGGAATGGAGGAGGAAGAA+TGG | 0.506045 | 7_4:-5610299 | None:intergenic |
| TTGTAGGTGCTTGCTGATGA+AGG | 0.509437 | 7_4:+5610628 | Msa1136880:intron |
| TCAGCATTGTCTGCTTTACA+AGG | 0.510440 | 7_4:+5612686 | Msa1136880:CDS |
| CAATAGAATAGTCAGGTCCT+GGG | 0.511171 | 7_4:-5614423 | None:intergenic |
| CATTCCTTGGTGGAGATCCA+TGG | 0.511576 | 7_4:+5610314 | Msa1136880:CDS |
| GGCGTTTGATGAAATTGATA+AGG | 0.515289 | 7_4:+5610666 | Msa1136880:CDS |
| ATGCTGAACCTCTAATGATA+GGG | 0.516366 | 7_4:-5612670 | None:intergenic |
| AGGAATGGAGGAGGAAGAAT+GGG | 0.516893 | 7_4:-5610298 | None:intergenic |
| CAATTACCGCTGAATATCAC+AGG | 0.518093 | 7_4:-5614457 | None:intergenic |
| ATCCCCTGGAAACTTGTAGA+AGG | 0.518821 | 7_4:-5612642 | None:intergenic |
| ATTGAGAATACATCTTCAAT+GGG | 0.521499 | 7_4:-5612812 | None:intergenic |
| TGAGATGTTCAAGAAGATGT+TGG | 0.521796 | 7_4:+5613539 | Msa1136880:CDS |
| GGAAGAATGGGTAGCGTCAT+CGG | 0.522126 | 7_4:-5610286 | None:intergenic |
| TCTTCAATGGGCATCAAGAA+AGG | 0.524319 | 7_4:-5612800 | None:intergenic |
| CTTGTTGTATCTGCACCTGA+TGG | 0.528400 | 7_4:+5612228 | Msa1136880:CDS |
| ACTATTGGACACGTGGATCA+CGG | 0.528486 | 7_4:+5610457 | Msa1136880:CDS |
| CTCCTGAAGAGAAGAAAAGA+GGG | 0.530043 | 7_4:+5610689 | Msa1136880:CDS |
| AGAGAGGGTGGCAGAACAGT+TGG | 0.536414 | 7_4:+5614318 | Msa1136880:CDS |
| TTCAAGAAGATGTTGGATCA+AGG | 0.539587 | 7_4:+5613546 | Msa1136880:CDS |
| GAAGATGTTGGATCAAGGAC+AGG | 0.545197 | 7_4:+5613551 | Msa1136880:CDS |
| ATATGTACTCACAAAGGATG+AGG | 0.545850 | 7_4:+5613914 | Msa1136880:CDS |
| TCTACAAGCTCTAACAACTC+TGG | 0.547509 | 7_4:-5612460 | None:intergenic |
| CAGAACAGTTGGTGCAGGTG+TGG | 0.550692 | 7_4:+5614329 | Msa1136880:CDS |
| GCTCCTGAAGAGAAGAAAAG+AGG | 0.558794 | 7_4:+5610688 | Msa1136880:CDS |
| TTGAGGACTGCTGATGTCAC+CGG | 0.560650 | 7_4:+5613984 | Msa1136880:CDS |
| CAAAGATTTGCCTTGAGAGA+GGG | 0.560920 | 7_4:+5614303 | Msa1136880:CDS |
| GGTGGCAGAACAGTTGGTGC+AGG | 0.561816 | 7_4:+5614324 | Msa1136880:CDS |
| TATGCTCATGTTGACTGCCC+TGG | 0.562571 | 7_4:+5610999 | Msa1136880:CDS |
| GGACGAGGAACAGTTGCTAC+TGG | 0.563419 | 7_4:+5613196 | Msa1136880:CDS |
| TGTTCTGCCACCCTCTCTCA+AGG | 0.564153 | 7_4:-5614313 | None:intergenic |
| AAGAGGGATTACAATTGCTA+CGG | 0.564494 | 7_4:+5610705 | Msa1136880:CDS |
| TGACCTTCTACAAGTTTCCA+GGG | 0.568787 | 7_4:+5612639 | Msa1136880:CDS |
| TAACATAATCGGCGTGTCCA+GGG | 0.569650 | 7_4:-5611016 | None:intergenic |
| GTGCCTGTTCCACTTGAACC+AGG | 0.570193 | 7_4:+5614080 | Msa1136880:CDS |
| CGTTCTGGTGAAAGTAGCCA+TGG | 0.573938 | 7_4:-5610331 | None:intergenic |
| ATGAAGTTTGAAACAAAATG+AGG | 0.576415 | 7_4:-5614690 | None:intergenic |
| GAGAGAAGTGTGGAATTGAG+AGG | 0.576888 | 7_4:-5610232 | None:intergenic |
| TTAGACACATTCACAACAAG+GGG | 0.579734 | 7_4:+5614392 | Msa1136880:three_prime_UTR |
| TACTCACAAAGGATGAGGGT+GGG | 0.581890 | 7_4:+5613919 | Msa1136880:CDS |
| AATGAAACGAGATTTAGAGA+AGG | 0.583083 | 7_4:-5610078 | None:intergenic |
| TTGAGTATGAGACTGCGAAA+AGG | 0.587605 | 7_4:+5610973 | Msa1136880:CDS |
| TTGTAGGCCGGTGATAATGT+TGG | 0.587725 | 7_4:+5613645 | Msa1136880:intron |
| AATTGAGAGGAGAAGAGGAA+AGG | 0.587918 | 7_4:-5610219 | None:intergenic |
| CATGGATCTCCACCAAGGAA+TGG | 0.590261 | 7_4:-5610313 | None:intergenic |
| GACTGTTAACGTATAAAGAG+AGG | 0.594031 | 7_4:-5614620 | None:intergenic |
| GAAAAGGTCATTGCTAAACC+CGG | 0.597744 | 7_4:+5613855 | Msa1136880:intron |
| TTTAGACACATTCACAACAA+GGG | 0.598088 | 7_4:+5614391 | Msa1136880:three_prime_UTR |
| ATATACCGACCTGGTTCAAG+TGG | 0.599617 | 7_4:-5614089 | None:intergenic |
| GCTACTGGTCGTGTTGAACA+AGG | 0.600283 | 7_4:+5613211 | Msa1136880:CDS |
| TGTAGGTGCTTGCTGATGAA+GGG | 0.600394 | 7_4:+5610629 | Msa1136880:intron |
| CGTCGGAACTATTGGACACG+TGG | 0.600647 | 7_4:+5610450 | Msa1136880:CDS |
| TGTCTTCACGTTTCAGACCA+CGG | 0.601798 | 7_4:-5613677 | None:intergenic |
| AGATTTGCCTTGAGAGAGGG+TGG | 0.603839 | 7_4:+5614306 | Msa1136880:CDS |
| TGCTTTACAAGGTACAAATG+AGG | 0.604944 | 7_4:+5612697 | Msa1136880:CDS |
| ATGATAGGGATATCATCCCC+TGG | 0.605677 | 7_4:-5612656 | None:intergenic |
| AACAAGGGGTTAGAAGCCCC+AGG | 0.612625 | 7_4:+5614406 | Msa1136880:three_prime_UTR |
| AAGAAGACCAACATTATCAC+CGG | 0.614685 | 7_4:-5613652 | None:intergenic |
| GGTGATTGCAGCAGTTAGTG+TGG | 0.615191 | 7_4:-5610485 | None:intergenic |
| ACAGCAGTAACATTGTCTCC+AGG | 0.616998 | 7_4:-5614044 | None:intergenic |
| ACTGGAGCTGCCCAAATGGA+CGG | 0.617245 | 7_4:+5612198 | Msa1136880:CDS |
| TCTCCACCAAGGAATGGAGG+AGG | 0.620202 | 7_4:-5610307 | None:intergenic |
| GGATCTCCACCAAGGAATGG+AGG | 0.622567 | 7_4:-5610310 | None:intergenic |
| CATCAGGTGCAGATACAACA+AGG | 0.636841 | 7_4:-5612227 | None:intergenic |
| GACCTTCTACAAGTTTCCAG+GGG | 0.639890 | 7_4:+5612640 | Msa1136880:CDS |
| TATGTACTCACAAAGGATGA+GGG | 0.639988 | 7_4:+5613915 | Msa1136880:CDS |
| AATAGAATAGTCAGGTCCTG+GGG | 0.640833 | 7_4:-5614422 | None:intergenic |
| TGGGTAGCGTCATCGGTGAG+AGG | 0.643356 | 7_4:-5610279 | None:intergenic |
| AATGTTGGTCTTCTTCTCCG+TGG | 0.651935 | 7_4:+5613660 | Msa1136880:CDS |
| AGAGATATATGTACTCACAA+AGG | 0.660869 | 7_4:+5613908 | Msa1136880:CDS |
| GTACTCACAAAGGATGAGGG+TGG | 0.668081 | 7_4:+5613918 | Msa1136880:CDS |
| ACAAACCCTGTGATATTCAG+CGG | 0.672382 | 7_4:+5614451 | Msa1136880:three_prime_UTR |
| GTGAACGAGTGAGAGAAGTG+TGG | 0.678699 | 7_4:-5610242 | None:intergenic |
| AATTACCGCTGAATATCACA+GGG | 0.682416 | 7_4:-5614456 | None:intergenic |
| ATCGTAGAAATGAAGGTTTG+GGG | 0.683413 | 7_4:-5610140 | None:intergenic |
| ATAGTTCCGACGTTAACATG+AGG | 0.685603 | 7_4:-5610439 | None:intergenic |
| TCGTAGAAATGAAGGTTTGG+GGG | 0.700032 | 7_4:-5610139 | None:intergenic |
| GCAGTCCTCAAGTAAAACTG+AGG | 0.704069 | 7_4:-5613972 | None:intergenic |
| CTTGTAGAAATGGAGCTCCG+TGG | 0.705529 | 7_4:+5612475 | Msa1136880:CDS |
| TGAAGGGAAAGCAAAAGCTG+TGG | 0.710762 | 7_4:+5610645 | Msa1136880:CDS |
| AGAAAGCCTCATGTTAACGT+CGG | 0.718585 | 7_4:+5610433 | Msa1136880:intron |
| ACTAACTGCTGCAATCACCA+GGG | 0.718624 | 7_4:+5610489 | Msa1136880:CDS |
| GGAGCTGCCCAAATGGACGG+TGG | 0.721733 | 7_4:+5612201 | Msa1136880:CDS |
| GTAGCCATGGATCTCCACCA+AGG | 0.736526 | 7_4:-5610318 | None:intergenic |
| AAACGTGAAGACATTCAACG+TGG | 0.815986 | 7_4:+5613687 | Msa1136880:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTAATTTTTTTTTTTTTA+AGG | + | chr7_4:5613174-5613193 | Msa1136880:intron | 0.0% |
| !!! | TTTAATTTTTTTTTTTTTAA+GGG | + | chr7_4:5613175-5613194 | Msa1136880:intron | 0.0% |
| !! | TTTAATTATAAATAATCCTT+GGG | - | chr7_4:5611308-5611327 | None:intergenic | 10.0% |
| !!! | TTAAAAACTCATTAATTTTT+AGG | - | chr7_4:5611657-5611676 | None:intergenic | 10.0% |
| !!! | AAGGTATTAAAAAAATAAAA+AGG | + | chr7_4:5611932-5611951 | Msa1136880:intron | 10.0% |
| !! | ATTATTTAATAAATGCATAA+CGG | - | chr7_4:5612154-5612173 | None:intergenic | 10.0% |
| !! | TTAACATCAAAACAATAAAT+CGG | - | chr7_4:5610531-5610550 | None:intergenic | 15.0% |
| !!! | ATGTTAATTGAAATTTTAAG+TGG | + | chr7_4:5610544-5610563 | Msa1136880:intron | 15.0% |
| !!! | TAATTGTTTGTTTAATTTTC+AGG | + | chr7_4:5610944-5610963 | Msa1136880:intron | 15.0% |
| !! | ATCATAAACAATACATTTAT+TGG | - | chr7_4:5611071-5611090 | None:intergenic | 15.0% |
| !!! | TTTTGATGTTAAAATATGAT+TGG | + | chr7_4:5611173-5611192 | Msa1136880:intron | 15.0% |
| !! | CTTTAATTATAAATAATCCT+TGG | - | chr7_4:5611309-5611328 | None:intergenic | 15.0% |
| !! | CAAGGATTATTTATAATTAA+AGG | + | chr7_4:5611307-5611326 | Msa1136880:intron | 15.0% |
| !!! | GATTTGATTAAGTTTTATTT+TGG | + | chr7_4:5611393-5611412 | Msa1136880:intron | 15.0% |
| !! | TATTAAAATTGAAAATGCAA+AGG | + | chr7_4:5611855-5611874 | Msa1136880:intron | 15.0% |
| !!! | TTTTAATACCTTACATATTA+TGG | - | chr7_4:5611924-5611943 | None:intergenic | 15.0% |
| !!! | TTATATATTTTATTTGCTGT+TGG | + | chr7_4:5613372-5613391 | Msa1136880:intron | 15.0% |
| !!! | ATTAATGTTTTATTCTTGTT+TGG | + | chr7_4:5613400-5613419 | Msa1136880:intron | 15.0% |
| !! | TAGTGTATATTAAACTAATA+TGG | + | chr7_4:5613611-5613630 | Msa1136880:intron | 15.0% |
| !!! | TTTTATTAAAAAGGACAATA+AGG | + | chr7_4:5614143-5614162 | Msa1136880:intron | 15.0% |
| !!! | ACTTGTTATTTTATTTTACA+GGG | + | chr7_4:5614280-5614299 | Msa1136880:intron | 15.0% |
| !!! | ATTGATTGATTTGATTTTGT+AGG | + | chr7_4:5610612-5610631 | Msa1136880:intron | 20.0% |
| !! | AAACCTTACTTTAACATAAT+CGG | - | chr7_4:5611030-5611049 | None:intergenic | 20.0% |
| !!! | TGTTTTTAAGATTTATGAAG+CGG | + | chr7_4:5611267-5611286 | Msa1136880:intron | 20.0% |
| !! | GGATTATTTATAATTAAAGG+TGG | + | chr7_4:5611310-5611329 | Msa1136880:intron | 20.0% |
| !! | TTATTTATAATTAAAGGTGG+TGG | + | chr7_4:5611313-5611332 | Msa1136880:intron | 20.0% |
| !! | AATTCTCAATATTGTCAATT+TGG | + | chr7_4:5611810-5611829 | Msa1136880:intron | 20.0% |
| !! | ATTCTCAATATTGTCAATTT+GGG | + | chr7_4:5611811-5611830 | Msa1136880:intron | 20.0% |
| !!! | TTTTCAATTTTAATAGAGGA+TGG | - | chr7_4:5611850-5611869 | None:intergenic | 20.0% |
| !!! | TGCATTTTCAATTTTAATAG+AGG | - | chr7_4:5611854-5611873 | None:intergenic | 20.0% |
| !! | AATTCTAACCATAATATGTA+AGG | + | chr7_4:5611913-5611932 | Msa1136880:intron | 20.0% |
| !!! | AACAATAAATGCAAACTTTT+AGG | + | chr7_4:5612321-5612340 | Msa1136880:intron | 20.0% |
| !! | TTCAAAATTTAACAATTACG+AGG | - | chr7_4:5612583-5612602 | None:intergenic | 20.0% |
| !!! | ATTTTTGTTAATCATCTATC+TGG | + | chr7_4:5612607-5612626 | Msa1136880:intron | 20.0% |
| !!! | AAAGGCCATTTTAAAATTAA+TGG | + | chr7_4:5612730-5612749 | Msa1136880:CDS | 20.0% |
| !!! | AGCATCCATTAATTTTAAAA+TGG | - | chr7_4:5612738-5612757 | None:intergenic | 20.0% |
| !!! | ATAACCATTTTAACATTTTC+TGG | - | chr7_4:5614023-5614042 | None:intergenic | 20.0% |
| !! | ATTGCAACATATGAAAAAAT+GGG | - | chr7_4:5614199-5614218 | None:intergenic | 20.0% |
| !! | CTGTAAAATAAAATAACAAG+TGG | - | chr7_4:5614281-5614300 | None:intergenic | 20.0% |
| !!! | CACTTGTTATTTTATTTTAC+AGG | + | chr7_4:5614279-5614298 | Msa1136880:intron | 20.0% |
| !!! | ATCAAAAGCATGTTTTTTTT+AGG | - | chr7_4:5614554-5614573 | None:intergenic | 20.0% |
| !!! | CATATTATTTTTCATAAAGC+AGG | - | chr7_4:5614591-5614610 | None:intergenic | 20.0% |
| !!! | ATTTGGTGTTTGGTTAATTA+GGG | + | chr7_4:5610574-5610593 | Msa1136880:intron | 25.0% |
| !! | AACAAAAAGTTTTACACTGT+CGG | + | chr7_4:5610887-5610906 | Msa1136880:intron | 25.0% |
| !!! | CATCCTTGTTTGTTTTTTTA+TGG | + | chr7_4:5610912-5610931 | Msa1136880:intron | 25.0% |
| ! | TTGCCATAAAAAAACAAACA+AGG | - | chr7_4:5610918-5610937 | None:intergenic | 25.0% |
| ! | GTTAAAGTAAGGTTTACATT+TGG | + | chr7_4:5611035-5611054 | Msa1136880:intron | 25.0% |
| !!! | TTAACTGTTTTTTGACCTAT+TGG | + | chr7_4:5611128-5611147 | Msa1136880:intron | 25.0% |
| !!! | TTTTTTGACCTATTGGAAAT+AGG | + | chr7_4:5611135-5611154 | Msa1136880:intron | 25.0% |
| !!! | GTTGAATATTTTTTTACCCA+AGG | + | chr7_4:5611289-5611308 | Msa1136880:intron | 25.0% |
| ! | TTAATCAAATCTCTATGACA+TGG | - | chr7_4:5611384-5611403 | None:intergenic | 25.0% |
| ! | TATATATACACCGAACATTA+TGG | + | chr7_4:5611705-5611724 | Msa1136880:intron | 25.0% |
| !! | TTTTTGCAGAATATGATTAC+TGG | + | chr7_4:5612180-5612199 | Msa1136880:intron | 25.0% |
| ! | ATTGAGAATACATCTTCAAT+GGG | - | chr7_4:5612815-5612834 | None:intergenic | 25.0% |
| ! | AATTGAGAATACATCTTCAA+TGG | - | chr7_4:5612816-5612835 | None:intergenic | 25.0% |
| ! | TCGTATTTAATTCAATGAGT+TGG | - | chr7_4:5612891-5612910 | None:intergenic | 25.0% |
| ! | TATTGAATAGATGCTACATT+GGG | - | chr7_4:5612996-5613015 | None:intergenic | 25.0% |
| ! | ATATTGAATAGATGCTACAT+TGG | - | chr7_4:5612997-5613016 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTTTTAAGGGACG+AGG | + | chr7_4:5613181-5613200 | Msa1136880:intron | 25.0% |
| !!! | TTTTATTCTTGTTTGGACAT+TGG | + | chr7_4:5613407-5613426 | Msa1136880:intron | 25.0% |
| !!! | TACAGGAAAAACTTAGTTTT+AGG | - | chr7_4:5613486-5613505 | None:intergenic | 25.0% |
| !! | TAAAACTAAGTTTTTCCTGT+AGG | + | chr7_4:5613485-5613504 | Msa1136880:intron | 25.0% |
| !! | AAAACTAAGTTTTTCCTGTA+GGG | + | chr7_4:5613486-5613505 | Msa1136880:intron | 25.0% |
| !! | TATGGATTTTCACATTTTGT+AGG | + | chr7_4:5613629-5613648 | Msa1136880:intron | 25.0% |
| ! | CATTGCAACATATGAAAAAA+TGG | - | chr7_4:5614200-5614219 | None:intergenic | 25.0% |
| ! | AATAAATTCAACCTATGATG+AGG | - | chr7_4:5614227-5614246 | None:intergenic | 25.0% |
| !!! | AACTGAGTAAATTTTAGAGA+AGG | + | chr7_4:5614484-5614503 | Msa1136880:three_prime_UTR | 25.0% |
| !! | ATGAAGTTTGAAACAAAATG+AGG | - | chr7_4:5614693-5614712 | None:intergenic | 25.0% |
| AATCGTAGAAATGAAGGTTT+GGG | - | chr7_4:5610144-5610163 | None:intergenic | 30.0% | |
| !! | TTGAAATTTTAAGTGGAGTG+AGG | + | chr7_4:5610551-5610570 | Msa1136880:intron | 30.0% |
| !! | GATTTGGTGTTTGGTTAATT+AGG | + | chr7_4:5610573-5610592 | Msa1136880:intron | 30.0% |
| TTTGGTTAATTAGGGTTTAG+AGG | + | chr7_4:5610582-5610601 | Msa1136880:intron | 30.0% | |
| TTATAAACGTAGCACTGTAA+AGG | + | chr7_4:5610843-5610862 | Msa1136880:intron | 30.0% | |
| TATAAACGTAGCACTGTAAA+GGG | + | chr7_4:5610844-5610863 | Msa1136880:intron | 30.0% | |
| TCTCAATACCTATTTCCAAT+AGG | - | chr7_4:5611146-5611165 | None:intergenic | 30.0% | |
| GGAATGAGCTCAAATAATTT+AGG | + | chr7_4:5611334-5611353 | Msa1136880:intron | 30.0% | |
| !!! | AAGTTTTATTTTGGTAGCCT+TGG | + | chr7_4:5611402-5611421 | Msa1136880:intron | 30.0% |
| !!! | AGTTTTATTTTGGTAGCCTT+GGG | + | chr7_4:5611403-5611422 | Msa1136880:intron | 30.0% |
| TGGAAATAAAATGAGCATAG+CGG | + | chr7_4:5611443-5611462 | Msa1136880:intron | 30.0% | |
| GAGAAAATACCTGTAATGTA+AGG | + | chr7_4:5611575-5611594 | Msa1136880:intron | 30.0% | |
| ATATCAACAGAATACCTACT+TGG | - | chr7_4:5612293-5612312 | None:intergenic | 30.0% | |
| AAGTAGGTATTCTGTTGATA+TGG | + | chr7_4:5612292-5612311 | Msa1136880:intron | 30.0% | |
| TATTTGTACATGAATTGTGC+AGG | + | chr7_4:5612384-5612403 | Msa1136880:intron | 30.0% | |
| ! | TTTAAAAAGCACACAAGAGA+TGG | - | chr7_4:5612418-5612437 | None:intergenic | 30.0% |
| GTTCATTCTTATCATGAAGA+GGG | - | chr7_4:5612538-5612557 | None:intergenic | 30.0% | |
| TGAAGATGTATTCTCAATTC+AGG | + | chr7_4:5612817-5612836 | Msa1136880:CDS | 30.0% | |
| GTATTCTCAATTCAGGTAAA+AGG | + | chr7_4:5612824-5612843 | Msa1136880:intron | 30.0% | |
| GATAACAAAAAAAGAACCCA+TGG | - | chr7_4:5612850-5612869 | None:intergenic | 30.0% | |
| CATTGAATTAAATACGAGCT+CGG | + | chr7_4:5612894-5612913 | Msa1136880:intron | 30.0% | |
| !! | TTACAGTACATGTTAGTCTT+GGG | + | chr7_4:5612928-5612947 | Msa1136880:intron | 30.0% |
| AGCATCTATTCAATATCAGT+TGG | + | chr7_4:5613001-5613020 | Msa1136880:intron | 30.0% | |
| ACATTCTGGATATGAAATCA+AGG | - | chr7_4:5613135-5613154 | None:intergenic | 30.0% | |
| GAACAAGGAATCATCAAAAT+TGG | + | chr7_4:5613226-5613245 | Msa1136880:CDS | 30.0% | |
| ! | ATGTTGATTGAGTCATTTAC+TGG | + | chr7_4:5613282-5613301 | Msa1136880:intron | 30.0% |
| TGAGTCATTTACTGGATTTA+TGG | + | chr7_4:5613290-5613309 | Msa1136880:intron | 30.0% | |
| ATAAATTCCTTGCATTGCAA+TGG | + | chr7_4:5613455-5613474 | Msa1136880:intron | 30.0% | |
| AGAGATATATGTACTCACAA+AGG | + | chr7_4:5613908-5613927 | Msa1136880:CDS | 30.0% | |
| GTTGCCAGAAAATGTTAAAA+TGG | + | chr7_4:5614016-5614035 | Msa1136880:CDS | 30.0% | |
| AATGTTAAAATGGTTATGCC+TGG | + | chr7_4:5614026-5614045 | Msa1136880:CDS | 30.0% | |
| CATTAAATTATATACCGACC+TGG | - | chr7_4:5614101-5614120 | None:intergenic | 30.0% | |
| GGTCGGTATATAATTTAATG+AGG | + | chr7_4:5614101-5614120 | Msa1136880:intron | 30.0% | |
| ! | TTTTAGACACATTCACAACA+AGG | + | chr7_4:5614390-5614409 | Msa1136880:three_prime_UTR | 30.0% |
| TTTAGACACATTCACAACAA+GGG | + | chr7_4:5614391-5614410 | Msa1136880:three_prime_UTR | 30.0% | |
| ! | GTGTTTTCAATAGAATAGTC+AGG | - | chr7_4:5614433-5614452 | None:intergenic | 30.0% |
| ATCGTAGAAATGAAGGTTTG+GGG | - | chr7_4:5610143-5610162 | None:intergenic | 35.0% | |
| GAATCGTAGAAATGAAGGTT+TGG | - | chr7_4:5610145-5610164 | None:intergenic | 35.0% | |
| ATTTCTACGATTCGCTTCAA+TGG | + | chr7_4:5610152-5610171 | Msa1136880:exon | 35.0% | |
| TTAGAGAGAGAATTACGTTC+TGG | - | chr7_4:5610349-5610368 | None:intergenic | 35.0% | |
| GAGAAATCAAATACTTACCC+TGG | - | chr7_4:5610509-5610528 | None:intergenic | 35.0% | |
| !! | TTTTAAGTGGAGTGAGGATT+TGG | + | chr7_4:5610557-5610576 | Msa1136880:intron | 35.0% |
| GGCGTTTGATGAAATTGATA+AGG | + | chr7_4:5610666-5610685 | Msa1136880:CDS | 35.0% | |
| AAGAGGGATTACAATTGCTA+CGG | + | chr7_4:5610705-5610724 | Msa1136880:CDS | 35.0% | |
| GAGTTCCACAAATATCTATG+TGG | - | chr7_4:5610821-5610840 | None:intergenic | 35.0% | |
| ATAAACGTAGCACTGTAAAG+GGG | + | chr7_4:5610845-5610864 | Msa1136880:intron | 35.0% | |
| ! | ACGCCGATTATGTTAAAGTA+AGG | + | chr7_4:5611024-5611043 | Msa1136880:intron | 35.0% |
| ! | ATTAGCTTAATGACGCAAGA+TGG | + | chr7_4:5611241-5611260 | Msa1136880:intron | 35.0% |
| !!! | GTTTTATTTTGGTAGCCTTG+GGG | + | chr7_4:5611404-5611423 | Msa1136880:intron | 35.0% |
| GTAGTAAGACTTGACAAGAT+AGG | + | chr7_4:5611490-5611509 | Msa1136880:intron | 35.0% | |
| AGACTTGACAAGATAGGATT+AGG | + | chr7_4:5611496-5611515 | Msa1136880:intron | 35.0% | |
| ATCTACTCTCCTTACATTAC+AGG | - | chr7_4:5611587-5611606 | None:intergenic | 35.0% | |
| AAGGAGAGTAGATAAGATGA+AGG | + | chr7_4:5611594-5611613 | Msa1136880:intron | 35.0% | |
| AGGAGAGTAGATAAGATGAA+GGG | + | chr7_4:5611595-5611614 | Msa1136880:intron | 35.0% | |
| CAATAAGTATGATGGCTACA+TGG | - | chr7_4:5611742-5611761 | None:intergenic | 35.0% | |
| GTAGCCATCATACTTATTGT+TGG | + | chr7_4:5611743-5611762 | Msa1136880:intron | 35.0% | |
| CCATCATACTTATTGTTGGT+GGG | + | chr7_4:5611747-5611766 | Msa1136880:intron | 35.0% | |
| ! | ATTGTTGGTGGGATAAGAAT+CGG | + | chr7_4:5611758-5611777 | Msa1136880:intron | 35.0% |
| AGCATGCCTTAATGTCTTAT+CGG | + | chr7_4:5612026-5612045 | Msa1136880:intron | 35.0% | |
| AAACACCCGATAAGACATTA+AGG | - | chr7_4:5612035-5612054 | None:intergenic | 35.0% | |
| ! | TCCTCATCAAATAGTGTTGA+TGG | - | chr7_4:5612106-5612125 | None:intergenic | 35.0% |
| !! | AGAATGTGCTCTTTAGTTTG+AGG | - | chr7_4:5612261-5612280 | None:intergenic | 35.0% |
| GTTGTTAGAGCTTGTAGAAA+TGG | + | chr7_4:5612465-5612484 | Msa1136880:CDS | 35.0% | |
| CTTATCATGAAGAGGGAAAA+GGG | - | chr7_4:5612531-5612550 | None:intergenic | 35.0% | |
| TCTTATCATGAAGAGGGAAA+AGG | - | chr7_4:5612532-5612551 | None:intergenic | 35.0% | |
| GGTTCATTCTTATCATGAAG+AGG | - | chr7_4:5612539-5612558 | None:intergenic | 35.0% | |
| GATGATATCCCTATCATTAG+AGG | + | chr7_4:5612662-5612681 | Msa1136880:CDS | 35.0% | |
| ATGCTGAACCTCTAATGATA+GGG | - | chr7_4:5612673-5612692 | None:intergenic | 35.0% | |
| AATGCTGAACCTCTAATGAT+AGG | - | chr7_4:5612674-5612693 | None:intergenic | 35.0% | |
| TGCTTTACAAGGTACAAATG+AGG | + | chr7_4:5612697-5612716 | Msa1136880:CDS | 35.0% | |
| AAATGAGGAGATTGGAAGAA+AGG | + | chr7_4:5612712-5612731 | Msa1136880:CDS | 35.0% | |
| ! | CTTACAGTACATGTTAGTCT+TGG | + | chr7_4:5612927-5612946 | Msa1136880:intron | 35.0% |
| !! | TACAGTACATGTTAGTCTTG+GGG | + | chr7_4:5612929-5612948 | Msa1136880:intron | 35.0% |
| !! | GTTTAGCCTTGAAATTGACA+CGG | + | chr7_4:5612970-5612989 | Msa1136880:intron | 35.0% |
| AGAGACAACAATGTTTGTCA+AGG | - | chr7_4:5613035-5613054 | None:intergenic | 35.0% | |
| !! | CAAAATTGGTGATGAAGTTG+AGG | + | chr7_4:5613240-5613259 | Msa1136880:CDS | 35.0% |
| CTTTCAGTATATTAAGCACG+AGG | - | chr7_4:5613338-5613357 | None:intergenic | 35.0% | |
| TGAGATGTTCAAGAAGATGT+TGG | + | chr7_4:5613539-5613558 | Msa1136880:CDS | 35.0% | |
| TTCAAGAAGATGTTGGATCA+AGG | + | chr7_4:5613546-5613565 | Msa1136880:CDS | 35.0% | |
| ! | GATTTTCACATTTTGTAGGC+CGG | + | chr7_4:5613633-5613652 | Msa1136880:intron | 35.0% |
| AAGAAGACCAACATTATCAC+CGG | - | chr7_4:5613655-5613674 | None:intergenic | 35.0% | |
| TGCAACAGTAACTAACAAAG+AGG | - | chr7_4:5613741-5613760 | None:intergenic | 35.0% | |
| !!! | GACGTTGTCTTGTTTTGAAA+AGG | + | chr7_4:5613839-5613858 | Msa1136880:intron | 35.0% |
| TATCTCTGCTTCAAATCTCT+TGG | - | chr7_4:5613895-5613914 | None:intergenic | 35.0% | |
| ATATGTACTCACAAAGGATG+AGG | + | chr7_4:5613914-5613933 | Msa1136880:CDS | 35.0% | |
| TATGTACTCACAAAGGATGA+GGG | + | chr7_4:5613915-5613934 | Msa1136880:CDS | 35.0% | |
| ! | ATAGACCTCAGTTTTACTTG+AGG | + | chr7_4:5613967-5613986 | Msa1136880:CDS | 35.0% |
| TGCAATGTTATCCTCATCAT+AGG | + | chr7_4:5614213-5614232 | Msa1136880:intron | 35.0% | |
| TTAGACACATTCACAACAAG+GGG | + | chr7_4:5614392-5614411 | Msa1136880:three_prime_UTR | 35.0% | |
| AATTACCGCTGAATATCACA+GGG | - | chr7_4:5614459-5614478 | None:intergenic | 35.0% | |
| GACTGTTAACGTATAAAGAG+AGG | - | chr7_4:5614623-5614642 | None:intergenic | 35.0% | |
| ACAGTCTGAATCGTAATTGT+TGG | + | chr7_4:5614637-5614656 | Msa1136880:three_prime_UTR | 35.0% | |
| CAGTCTGAATCGTAATTGTT+GGG | + | chr7_4:5614638-5614657 | Msa1136880:three_prime_UTR | 35.0% | |
| TCGTAGAAATGAAGGTTTGG+GGG | - | chr7_4:5610142-5610161 | None:intergenic | 40.0% | |
| GAAGCGAATCGTAGAAATGA+AGG | - | chr7_4:5610150-5610169 | None:intergenic | 40.0% | |
| AATTGAGAGGAGAAGAGGAA+AGG | - | chr7_4:5610222-5610241 | None:intergenic | 40.0% | |
| GTGAGAGGTGATTGAGAAAT+CGG | - | chr7_4:5610267-5610286 | None:intergenic | 40.0% | |
| AGAAAGCCTCATGTTAACGT+CGG | + | chr7_4:5610433-5610452 | Msa1136880:intron | 40.0% | |
| ATAGTTCCGACGTTAACATG+AGG | - | chr7_4:5610442-5610461 | None:intergenic | 40.0% | |
| CATGTTAACGTCGGAACTAT+TGG | + | chr7_4:5610442-5610461 | Msa1136880:CDS | 40.0% | |
| CTCCTGAAGAGAAGAAAAGA+GGG | + | chr7_4:5610689-5610708 | Msa1136880:CDS | 40.0% | |
| ! | ATCCCTCTTTTCTTCTCTTC+AGG | - | chr7_4:5610694-5610713 | None:intergenic | 40.0% |
| GGATTACAATTGCTACGGTT+CGG | + | chr7_4:5610710-5610729 | Msa1136880:intron | 40.0% | |
| TCACGCCACATAGATATTTG+TGG | + | chr7_4:5610813-5610832 | Msa1136880:intron | 40.0% | |
| TTGAGTATGAGACTGCGAAA+AGG | + | chr7_4:5610973-5610992 | Msa1136880:CDS | 40.0% | |
| !!! | ATTAGTTTTTTACCGCCCCA+AGG | - | chr7_4:5611422-5611441 | None:intergenic | 40.0% |
| GGGGCGGTAAAAAACTAATA+TGG | + | chr7_4:5611423-5611442 | Msa1136880:intron | 40.0% | |
| TCAAACGACGCCATAATGTT+CGG | - | chr7_4:5611718-5611737 | None:intergenic | 40.0% | |
| GCCATCATACTTATTGTTGG+TGG | + | chr7_4:5611746-5611765 | Msa1136880:intron | 40.0% | |
| CCCACCAACAATAAGTATGA+TGG | - | chr7_4:5611750-5611769 | None:intergenic | 40.0% | |
| ! | TTTGCTGTGTCTCAGATAAC+AGG | + | chr7_4:5611977-5611996 | Msa1136880:intron | 40.0% |
| GCATGCCTTAATGTCTTATC+GGG | + | chr7_4:5612027-5612046 | Msa1136880:intron | 40.0% | |
| GCCATCAACACTATTTGATG+AGG | + | chr7_4:5612102-5612121 | Msa1136880:intron | 40.0% | |
| TTTGATGAGGAATGCTTCTG+CGG | + | chr7_4:5612115-5612134 | Msa1136880:intron | 40.0% | |
| !! | TGCTCTTTAGTTTGAGGCAT+TGG | - | chr7_4:5612255-5612274 | None:intergenic | 40.0% |
| CCTTAGAAGCAAGGAAGTAA+CGG | - | chr7_4:5612351-5612370 | None:intergenic | 40.0% | |
| GAATGTTGACCTTAGAAGCA+AGG | - | chr7_4:5612360-5612379 | None:intergenic | 40.0% | |
| TGTACATGAATTGTGCAGGT+TGG | + | chr7_4:5612388-5612407 | Msa1136880:intron | 40.0% | |
| ! | TCTACAAGCTCTAACAACTC+TGG | - | chr7_4:5612463-5612482 | None:intergenic | 40.0% |
| TCTTAGAGAAAAACCCACCA+CGG | - | chr7_4:5612495-5612514 | None:intergenic | 40.0% | |
| TTGACCTTCTACAAGTTTCC+AGG | + | chr7_4:5612638-5612657 | Msa1136880:CDS | 40.0% | |
| TGACCTTCTACAAGTTTCCA+GGG | + | chr7_4:5612639-5612658 | Msa1136880:CDS | 40.0% | |
| TCAGCATTGTCTGCTTTACA+AGG | + | chr7_4:5612686-5612705 | Msa1136880:CDS | 40.0% | |
| CAAGGTACAAATGAGGAGAT+TGG | + | chr7_4:5612704-5612723 | Msa1136880:CDS | 40.0% | |
| !! | TCAAGAAAGGCTTTTCAAGC+TGG | - | chr7_4:5612790-5612809 | None:intergenic | 40.0% |
| TCTTCAATGGGCATCAAGAA+AGG | - | chr7_4:5612803-5612822 | None:intergenic | 40.0% | |
| TCAATTCAGGTAAAAGGCCA+TGG | + | chr7_4:5612830-5612849 | Msa1136880:intron | 40.0% | |
| CAATTCAGGTAAAAGGCCAT+GGG | + | chr7_4:5612831-5612850 | Msa1136880:intron | 40.0% | |
| !! | TGGTGATGAAGTTGAGGTTT+TGG | + | chr7_4:5613246-5613265 | Msa1136880:CDS | 40.0% |
| ! | GGTGATGAAGTTGAGGTTTT+GGG | + | chr7_4:5613247-5613266 | Msa1136880:CDS | 40.0% |
| ! | ACTAAGTTTTTCCTGTAGGG+TGG | + | chr7_4:5613489-5613508 | Msa1136880:intron | 40.0% |
| !!! | CCAGTAACTGTTGTTTTCAG+AGG | - | chr7_4:5613516-5613535 | None:intergenic | 40.0% |
| ! | CCTCTGAAAACAACAGTTAC+TGG | + | chr7_4:5613513-5613532 | Msa1136880:CDS | 40.0% |
| AAACGTGAAGACATTCAACG+TGG | + | chr7_4:5613687-5613706 | Msa1136880:CDS | 40.0% | |
| GAAAAGGTCATTGCTAAACC+CGG | + | chr7_4:5613855-5613874 | Msa1136880:intron | 40.0% | |
| !! | TTCTGGCAACTCTACTTTTC+CGG | - | chr7_4:5614006-5614025 | None:intergenic | 40.0% |
| ATGCACTTTATGCTAGAGTG+TGG | + | chr7_4:5614247-5614266 | Msa1136880:intron | 40.0% | |
| CAAAGATTTGCCTTGAGAGA+GGG | + | chr7_4:5614303-5614322 | Msa1136880:CDS | 40.0% | |
| AATAGAATAGTCAGGTCCTG+GGG | - | chr7_4:5614425-5614444 | None:intergenic | 40.0% | |
| CAATAGAATAGTCAGGTCCT+GGG | - | chr7_4:5614426-5614445 | None:intergenic | 40.0% | |
| TCAATAGAATAGTCAGGTCC+TGG | - | chr7_4:5614427-5614446 | None:intergenic | 40.0% | |
| ACAAACCCTGTGATATTCAG+CGG | + | chr7_4:5614451-5614470 | Msa1136880:three_prime_UTR | 40.0% | |
| CAATTACCGCTGAATATCAC+AGG | - | chr7_4:5614460-5614479 | None:intergenic | 40.0% | |
| CTGTGATATTCAGCGGTAAT+TGG | + | chr7_4:5614458-5614477 | Msa1136880:three_prime_UTR | 40.0% | |
| !!! | GAGGGTTTTAGGTTCAGAGA+TGG | - | chr7_4:5610115-5610134 | None:intergenic | 45.0% |
| TGTGGAATTGAGAGGAGAAG+AGG | - | chr7_4:5610227-5610246 | None:intergenic | 45.0% | |
| ! | GAGAGAAGTGTGGAATTGAG+AGG | - | chr7_4:5610235-5610254 | None:intergenic | 45.0% |
| AGGAATGGAGGAGGAAGAAT+GGG | - | chr7_4:5610301-5610320 | None:intergenic | 45.0% | |
| AAGGAATGGAGGAGGAAGAA+TGG | - | chr7_4:5610302-5610321 | None:intergenic | 45.0% | |
| ATTCTTCCTCCTCCATTCCT+TGG | + | chr7_4:5610301-5610320 | Msa1136880:CDS | 45.0% | |
| ACTATTGGACACGTGGATCA+CGG | + | chr7_4:5610457-5610476 | Msa1136880:CDS | 45.0% | |
| ACTAACTGCTGCAATCACCA+GGG | + | chr7_4:5610489-5610508 | Msa1136880:CDS | 45.0% | |
| !! | TGGAGTGAGGATTTGGTGTT+TGG | + | chr7_4:5610564-5610583 | Msa1136880:intron | 45.0% |
| ! | TTGTAGGTGCTTGCTGATGA+AGG | + | chr7_4:5610628-5610647 | Msa1136880:intron | 45.0% |
| ! | TGTAGGTGCTTGCTGATGAA+GGG | + | chr7_4:5610629-5610648 | Msa1136880:intron | 45.0% |
| TGAAGGGAAAGCAAAAGCTG+TGG | + | chr7_4:5610645-5610664 | Msa1136880:CDS | 45.0% | |
| GCTCCTGAAGAGAAGAAAAG+AGG | + | chr7_4:5610688-5610707 | Msa1136880:CDS | 45.0% | |
| GCACTGTAAAGGGGTTTGAT+TGG | + | chr7_4:5610854-5610873 | Msa1136880:intron | 45.0% | |
| TAACATAATCGGCGTGTCCA+GGG | - | chr7_4:5611019-5611038 | None:intergenic | 45.0% | |
| TTAACATAATCGGCGTGTCC+AGG | - | chr7_4:5611020-5611039 | None:intergenic | 45.0% | |
| !!! | TTATTTTGGTAGCCTTGGGG+CGG | + | chr7_4:5611407-5611426 | Msa1136880:intron | 45.0% |
| TCGACCTATCGTAGAAAAGC+TGG | + | chr7_4:5611520-5611539 | Msa1136880:intron | 45.0% | |
| ACCTATCGTAGAAAAGCTGG+TGG | + | chr7_4:5611523-5611542 | Msa1136880:intron | 45.0% | |
| ! | TCCACCAGCTTTTCTACGAT+AGG | - | chr7_4:5611527-5611546 | None:intergenic | 45.0% |
| AAACTCAGCTTAGGTGGTCT+GGG | + | chr7_4:5611546-5611565 | Msa1136880:intron | 45.0% | |
| AAGGATACCACCGTCCATTT+GGG | - | chr7_4:5612211-5612230 | None:intergenic | 45.0% | |
| CATCAGGTGCAGATACAACA+AGG | - | chr7_4:5612230-5612249 | None:intergenic | 45.0% | |
| ! | CTTGTTGTATCTGCACCTGA+TGG | + | chr7_4:5612228-5612247 | Msa1136880:CDS | 45.0% |
| !! | ATTCTTCTAGCTCGCCAAGT+AGG | + | chr7_4:5612276-5612295 | Msa1136880:intron | 45.0% |
| CCGTTACTTCCTTGCTTCTA+AGG | + | chr7_4:5612348-5612367 | Msa1136880:intron | 45.0% | |
| TCATGAAGAGGGAAAAGGGT+GGG | - | chr7_4:5612527-5612546 | None:intergenic | 45.0% | |
| ATCATGAAGAGGGAAAAGGG+TGG | - | chr7_4:5612528-5612547 | None:intergenic | 45.0% | |
| ACGACTACAGGAAGTTACGA+AGG | - | chr7_4:5612560-5612579 | None:intergenic | 45.0% | |
| ACAATTACGAGGACGACTAC+AGG | - | chr7_4:5612572-5612591 | None:intergenic | 45.0% | |
| GACCTTCTACAAGTTTCCAG+GGG | + | chr7_4:5612640-5612659 | Msa1136880:CDS | 45.0% | |
| ATCCCCTGGAAACTTGTAGA+AGG | - | chr7_4:5612645-5612664 | None:intergenic | 45.0% | |
| ATGATAGGGATATCATCCCC+TGG | - | chr7_4:5612659-5612678 | None:intergenic | 45.0% | |
| ATTGGGCCGTGTCAATTTCA+AGG | - | chr7_4:5612979-5612998 | None:intergenic | 45.0% | |
| AAGCAGCAGACATGACATTC+TGG | - | chr7_4:5613149-5613168 | None:intergenic | 45.0% | |
| !!! | TGAGGTTTTGGGTATGACAC+AGG | + | chr7_4:5613258-5613277 | Msa1136880:CDS | 45.0% |
| CGAGGAATGACGAGAATTCA+AGG | - | chr7_4:5613320-5613339 | None:intergenic | 45.0% | |
| GGAAACACCATTGCAATGCA+AGG | - | chr7_4:5613465-5613484 | None:intergenic | 45.0% | |
| GAAGATGTTGGATCAAGGAC+AGG | + | chr7_4:5613551-5613570 | Msa1136880:CDS | 45.0% | |
| ! | TTGTAGGCCGGTGATAATGT+TGG | + | chr7_4:5613645-5613664 | Msa1136880:intron | 45.0% |
| !! | AATGTTGGTCTTCTTCTCCG+TGG | + | chr7_4:5613660-5613679 | Msa1136880:CDS | 45.0% |
| TGTCTTCACGTTTCAGACCA+CGG | - | chr7_4:5613680-5613699 | None:intergenic | 45.0% | |
| TGAAGACATTCAACGTGGTC+AGG | + | chr7_4:5613692-5613711 | Msa1136880:CDS | 45.0% | |
| ! | TTGGATGCTTTTGTAGCACC+GGG | - | chr7_4:5613876-5613895 | None:intergenic | 45.0% |
| ! | CTTGGATGCTTTTGTAGCAC+CGG | - | chr7_4:5613877-5613896 | None:intergenic | 45.0% |
| TACTCACAAAGGATGAGGGT+GGG | + | chr7_4:5613919-5613938 | Msa1136880:CDS | 45.0% | |
| GCAGTCCTCAAGTAAAACTG+AGG | - | chr7_4:5613975-5613994 | None:intergenic | 45.0% | |
| ACAGCAGTAACATTGTCTCC+AGG | - | chr7_4:5614047-5614066 | None:intergenic | 45.0% | |
| ATATACCGACCTGGTTCAAG+TGG | - | chr7_4:5614092-5614111 | None:intergenic | 45.0% | |
| GCAAAGATTTGCCTTGAGAG+AGG | + | chr7_4:5614302-5614321 | Msa1136880:CDS | 45.0% | |
| !!! | TTTTTTTTCTTTTATTAAAA+AGG | + | chr7_4:5614134-5614153 | Msa1136880:intron | 5.0% |
| GTGAACGAGTGAGAGAAGTG+TGG | - | chr7_4:5610245-5610264 | None:intergenic | 50.0% | |
| GGAAGAATGGGTAGCGTCAT+CGG | - | chr7_4:5610289-5610308 | None:intergenic | 50.0% | |
| CATGGATCTCCACCAAGGAA+TGG | - | chr7_4:5610316-5610335 | None:intergenic | 50.0% | |
| CATTCCTTGGTGGAGATCCA+TGG | + | chr7_4:5610314-5610333 | Msa1136880:CDS | 50.0% | |
| CGTTCTGGTGAAAGTAGCCA+TGG | - | chr7_4:5610334-5610353 | None:intergenic | 50.0% | |
| GGTGATTGCAGCAGTTAGTG+TGG | - | chr7_4:5610488-5610507 | None:intergenic | 50.0% | |
| CACTAACTGCTGCAATCACC+AGG | + | chr7_4:5610488-5610507 | Msa1136880:CDS | 50.0% | |
| ! | TATGCTCATGTTGACTGCCC+TGG | + | chr7_4:5610999-5611018 | Msa1136880:CDS | 50.0% |
| AGCTGGTGGAAACTCAGCTT+AGG | + | chr7_4:5611537-5611556 | Msa1136880:intron | 50.0% | |
| TGGTGGAAACTCAGCTTAGG+TGG | + | chr7_4:5611540-5611559 | Msa1136880:intron | 50.0% | |
| GAAACTCAGCTTAGGTGGTC+TGG | + | chr7_4:5611545-5611564 | Msa1136880:intron | 50.0% | |
| GATTACTGGAGCTGCCCAAA+TGG | + | chr7_4:5612194-5612213 | Msa1136880:CDS | 50.0% | |
| CAAGGATACCACCGTCCATT+TGG | - | chr7_4:5612212-5612231 | None:intergenic | 50.0% | |
| !! | GTTTGAGGCATTGGTCCATC+AGG | - | chr7_4:5612246-5612265 | None:intergenic | 50.0% |
| CTTGTAGAAATGGAGCTCCG+TGG | + | chr7_4:5612475-5612494 | Msa1136880:CDS | 50.0% | |
| TAGAAATGGAGCTCCGTGGT+GGG | + | chr7_4:5612479-5612498 | Msa1136880:intron | 50.0% | |
| !! | GCTTTTCAAGCTGGCGAACA+GGG | - | chr7_4:5612781-5612800 | None:intergenic | 50.0% |
| GCTACTGGTCGTGTTGAACA+AGG | + | chr7_4:5613211-5613230 | Msa1136880:CDS | 50.0% | |
| ! | TTTTCAGAGGACCACCCTAC+AGG | - | chr7_4:5613503-5613522 | None:intergenic | 50.0% |
| GTACTCACAAAGGATGAGGG+TGG | + | chr7_4:5613918-5613937 | Msa1136880:CDS | 50.0% | |
| TTGAGGACTGCTGATGTCAC+CGG | + | chr7_4:5613984-5614003 | Msa1136880:CDS | 50.0% | |
| CTGTTCCACTTGAACCAGGT+CGG | + | chr7_4:5614084-5614103 | Msa1136880:intron | 50.0% | |
| AGATTTGCCTTGAGAGAGGG+TGG | + | chr7_4:5614306-5614325 | Msa1136880:CDS | 50.0% | |
| ! | TTGGGGGCGATGAGGGTTTT+AGG | - | chr7_4:5610126-5610145 | None:intergenic | 55.0% |
| TGAAGGTTTGGGGGCGATGA+GGG | - | chr7_4:5610133-5610152 | None:intergenic | 55.0% | |
| ATGAAGGTTTGGGGGCGATG+AGG | - | chr7_4:5610134-5610153 | None:intergenic | 55.0% | |
| CTTCCTCCTCCATTCCTTGG+TGG | + | chr7_4:5610304-5610323 | Msa1136880:CDS | 55.0% | |
| TCTCCACCAAGGAATGGAGG+AGG | - | chr7_4:5610310-5610329 | None:intergenic | 55.0% | |
| GGATCTCCACCAAGGAATGG+AGG | - | chr7_4:5610313-5610332 | None:intergenic | 55.0% | |
| GTAGCCATGGATCTCCACCA+AGG | - | chr7_4:5610321-5610340 | None:intergenic | 55.0% | |
| CGTCGGAACTATTGGACACG+TGG | + | chr7_4:5610450-5610469 | Msa1136880:CDS | 55.0% | |
| ACTGGAGCTGCCCAAATGGA+CGG | + | chr7_4:5612198-5612217 | Msa1136880:CDS | 55.0% | |
| GTAGAAATGGAGCTCCGTGG+TGG | + | chr7_4:5612478-5612497 | Msa1136880:intron | 55.0% | |
| GAAGAGGGAAAAGGGTGGGA+AGG | - | chr7_4:5612523-5612542 | None:intergenic | 55.0% | |
| !! | GGCTTTTCAAGCTGGCGAAC+AGG | - | chr7_4:5612782-5612801 | None:intergenic | 55.0% |
| GGACGAGGAACAGTTGCTAC+TGG | + | chr7_4:5613196-5613215 | Msa1136880:CDS | 55.0% | |
| GTGCCTGTTCCACTTGAACC+AGG | + | chr7_4:5614080-5614099 | Msa1136880:CDS | 55.0% | |
| CGACCTGGTTCAAGTGGAAC+AGG | - | chr7_4:5614086-5614105 | None:intergenic | 55.0% | |
| TGTTCTGCCACCCTCTCTCA+AGG | - | chr7_4:5614316-5614335 | None:intergenic | 55.0% | |
| AGAGAGGGTGGCAGAACAGT+TGG | + | chr7_4:5614318-5614337 | Msa1136880:CDS | 55.0% | |
| ! | CAGAACAGTTGGTGCAGGTG+TGG | + | chr7_4:5614329-5614348 | Msa1136880:CDS | 55.0% |
| AACAAGGGGTTAGAAGCCCC+AGG | + | chr7_4:5614406-5614425 | Msa1136880:three_prime_UTR | 55.0% | |
| TGGGTAGCGTCATCGGTGAG+AGG | - | chr7_4:5610282-5610301 | None:intergenic | 60.0% | |
| GCTTAGGTGGTCTGGGCTTG+TGG | + | chr7_4:5611553-5611572 | Msa1136880:intron | 60.0% | |
| TCAAGCTGGCGAACAGGGTC+AGG | - | chr7_4:5612776-5612795 | None:intergenic | 60.0% | |
| ! | GGTGGCAGAACAGTTGGTGC+AGG | + | chr7_4:5614324-5614343 | Msa1136880:CDS | 60.0% |
| GGAGCTGCCCAAATGGACGG+TGG | + | chr7_4:5612201-5612220 | Msa1136880:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 5610080 | 5614730 | 5610080 | ID=Msa1136880;Name=Msa1136880 |
| chr7_4 | mRNA | 5610080 | 5614730 | 5610080 | ID=Msa1136880-mRNA-1;Parent=Msa1136880;Name=Msa1136880-mRNA-1;_AED=0.11;_eAED=0.11;_QI=91|1|1|1|1|1|12|359|450 |
| chr7_4 | exon | 5610080 | 5610352 | 5610080 | ID=Msa1136880-mRNA-1:exon:1473;Parent=Msa1136880-mRNA-1 |
| chr7_4 | exon | 5610435 | 5610510 | 5610435 | ID=Msa1136880-mRNA-1:exon:1474;Parent=Msa1136880-mRNA-1 |
| chr7_4 | exon | 5610634 | 5610726 | 5610634 | ID=Msa1136880-mRNA-1:exon:1475;Parent=Msa1136880-mRNA-1 |
| chr7_4 | exon | 5610966 | 5611040 | 5610966 | ID=Msa1136880-mRNA-1:exon:1476;Parent=Msa1136880-mRNA-1 |
| chr7_4 | exon | 5612189 | 5612293 | 5612189 | ID=Msa1136880-mRNA-1:exon:1477;Parent=Msa1136880-mRNA-1 |
| chr7_4 | exon | 5612406 | 5612496 | 5612406 | ID=Msa1136880-mRNA-1:exon:1478;Parent=Msa1136880-mRNA-1 |
| chr7_4 | exon | 5612633 | 5612838 | 5612633 | ID=Msa1136880-mRNA-1:exon:1479;Parent=Msa1136880-mRNA-1 |
| chr7_4 | exon | 5613196 | 5613279 | 5613196 | ID=Msa1136880-mRNA-1:exon:1480;Parent=Msa1136880-mRNA-1 |
| chr7_4 | exon | 5613507 | 5613572 | 5613507 | ID=Msa1136880-mRNA-1:exon:1481;Parent=Msa1136880-mRNA-1 |
| chr7_4 | exon | 5613651 | 5613713 | 5613651 | ID=Msa1136880-mRNA-1:exon:1482;Parent=Msa1136880-mRNA-1 |
| chr7_4 | exon | 5613861 | 5614101 | 5613861 | ID=Msa1136880-mRNA-1:exon:1483;Parent=Msa1136880-mRNA-1 |
| chr7_4 | exon | 5614301 | 5614730 | 5614301 | ID=Msa1136880-mRNA-1:exon:1484;Parent=Msa1136880-mRNA-1 |
| chr7_4 | five_prime_UTR | 5610080 | 5610170 | 5610080 | ID=Msa1136880-mRNA-1:five_prime_utr;Parent=Msa1136880-mRNA-1 |
| chr7_4 | CDS | 5610171 | 5610352 | 5610171 | ID=Msa1136880-mRNA-1:cds;Parent=Msa1136880-mRNA-1 |
| chr7_4 | CDS | 5610435 | 5610510 | 5610435 | ID=Msa1136880-mRNA-1:cds;Parent=Msa1136880-mRNA-1 |
| chr7_4 | CDS | 5610634 | 5610726 | 5610634 | ID=Msa1136880-mRNA-1:cds;Parent=Msa1136880-mRNA-1 |
| chr7_4 | CDS | 5610966 | 5611040 | 5610966 | ID=Msa1136880-mRNA-1:cds;Parent=Msa1136880-mRNA-1 |
| chr7_4 | CDS | 5612189 | 5612293 | 5612189 | ID=Msa1136880-mRNA-1:cds;Parent=Msa1136880-mRNA-1 |
| chr7_4 | CDS | 5612406 | 5612496 | 5612406 | ID=Msa1136880-mRNA-1:cds;Parent=Msa1136880-mRNA-1 |
| chr7_4 | CDS | 5612633 | 5612838 | 5612633 | ID=Msa1136880-mRNA-1:cds;Parent=Msa1136880-mRNA-1 |
| chr7_4 | CDS | 5613196 | 5613279 | 5613196 | ID=Msa1136880-mRNA-1:cds;Parent=Msa1136880-mRNA-1 |
| chr7_4 | CDS | 5613507 | 5613572 | 5613507 | ID=Msa1136880-mRNA-1:cds;Parent=Msa1136880-mRNA-1 |
| chr7_4 | CDS | 5613651 | 5613713 | 5613651 | ID=Msa1136880-mRNA-1:cds;Parent=Msa1136880-mRNA-1 |
| chr7_4 | CDS | 5613861 | 5614101 | 5613861 | ID=Msa1136880-mRNA-1:cds;Parent=Msa1136880-mRNA-1 |
| chr7_4 | CDS | 5614301 | 5614371 | 5614301 | ID=Msa1136880-mRNA-1:cds;Parent=Msa1136880-mRNA-1 |
| chr7_4 | three_prime_UTR | 5614372 | 5614730 | 5614372 | ID=Msa1136880-mRNA-1:three_prime_utr;Parent=Msa1136880-mRNA-1 |
| Gene Sequence |
| Protein sequence |
