Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0374360 | XP_003602065.1 | 99.088 | 329 | 3 | 0 | 1 | 329 | 1 | 329 | 0.0 | 678 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0374360 | sp|Q9XI00|SKI32_ARATH | 78.395 | 324 | 68 | 1 | 8 | 329 | 5 | 328 | 0.0 | 560 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0374360 | B7FL96 | 99.088 | 329 | 3 | 0 | 1 | 329 | 1 | 329 | 0.0 | 678 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0374360 | Msa0374440 | 0.876286 | 1.575113e-68 | -8.615850e-47 |
| Msa0374360 | Msa0374530 | 0.864894 | 8.751848e-65 | -8.615850e-47 |
| Msa0374360 | Msa0374570 | 0.883185 | 5.554805e-71 | -8.615850e-47 |
| Msa0374360 | Msa0469920 | 0.919708 | 3.209054e-87 | -8.615850e-47 |
| Msa0374360 | Msa0525370 | 0.942144 | 1.207313e-101 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0374360 | MtrunA17_Chr3g0124891 | 99.088 | 329 | 3 | 0 | 1 | 329 | 1 | 329 | 0.0 | 678 |
| Msa0374360 | MtrunA17_Chr4g0034401 | 98.182 | 55 | 1 | 0 | 20 | 74 | 17 | 71 | 7.13e-33 | 116 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0374360 | AT1G21760.1 | 78.395 | 324 | 68 | 1 | 8 | 329 | 5 | 328 | 0.0 | 560 |
| Msa0374360 | AT1G21760.2 | 78.395 | 324 | 68 | 1 | 8 | 329 | 5 | 328 | 0.0 | 560 |
Find 109 sgRNAs with CRISPR-Local
Find 331 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAATTGAACCAGGTATTTC+AGG | 0.219347 | 3_1:-73805795 | None:intergenic |
| CAATTCGTAACCCTGTATTT+TGG | 0.228001 | 3_1:+73802313 | Msa0374360:CDS |
| GTGAGACCTGTCGCGCCTTT+TGG | 0.256079 | 3_1:+73801712 | Msa0374360:CDS |
| GAATTTGCCCGTGGAGAAAA+TGG | 0.273613 | 3_1:+73805744 | Msa0374360:CDS |
| CTTTGTCTTTGTTCCATTTG+AGG | 0.303655 | 3_1:+73805464 | Msa0374360:CDS |
| TCACTCATGGCGTCAGGTTC+AGG | 0.314341 | 3_1:+73801001 | Msa0374360:exon |
| TGTGAGACTGCTGGCACATC+GGG | 0.330474 | 3_1:-73805423 | None:intergenic |
| CCTCTTGTGTGTGTCGAAAA+TGG | 0.348503 | 3_1:+73802283 | Msa0374360:CDS |
| AAAATGGATTATTATGTTCC+TGG | 0.362832 | 3_1:+73805760 | Msa0374360:CDS |
| GCCAAAACAGACTCTGTCTT+TGG | 0.364430 | 3_1:+73804199 | Msa0374360:CDS |
| TATAAATATTGAAAGTTATG+AGG | 0.373083 | 3_1:-73805823 | None:intergenic |
| TTCTGCAGGTCTGTTATTAC+CGG | 0.373358 | 3_1:+73804000 | Msa0374360:intron |
| TGAATGCATACCACGTGAAC+TGG | 0.384411 | 3_1:-73802905 | None:intergenic |
| CATGCATTGCGCCAAAATAC+AGG | 0.392919 | 3_1:-73802324 | None:intergenic |
| ACCAGATGAGCTGCTCTTTG+AGG | 0.392938 | 3_1:+73801786 | Msa0374360:CDS |
| AGTTAAACACATGATTTGTA+TGG | 0.399824 | 3_1:-73806049 | None:intergenic |
| ACCAAAGACAGAGTCTGTTT+TGG | 0.404539 | 3_1:-73804200 | None:intergenic |
| TTCCTTTCACTCATGGCGTC+AGG | 0.406079 | 3_1:+73800995 | Msa0374360:exon |
| ACATCTGAAGAGGACATTCT+TGG | 0.408711 | 3_1:+73805363 | Msa0374360:CDS |
| ACCTCAAAGAGCAGCTCATC+TGG | 0.409773 | 3_1:-73801787 | None:intergenic |
| CGGCCAAGGTTGCGATTTGA+CGG | 0.413839 | 3_1:+73802518 | Msa0374360:CDS |
| TAAAACTGTACCTCCTCAAA+TGG | 0.415424 | 3_1:-73805477 | None:intergenic |
| GGCGGAAAATGTGGCTCTTA+CGG | 0.415806 | 3_1:+73802498 | Msa0374360:CDS |
| CCTCAATTTCCTTTCACTCA+TGG | 0.417964 | 3_1:+73800988 | Msa0374360:exon |
| CAACTACAGGGGCTAACAAT+AGG | 0.418268 | 3_1:+73805289 | Msa0374360:CDS |
| AACGTAAGACACCAGAGGTT+TGG | 0.423828 | 3_1:-73800882 | None:intergenic |
| CTGTTAACTACTTTGTTACA+AGG | 0.425322 | 3_1:+73801548 | Msa0374360:CDS |
| ACACCAGAGGTTTGGTTTCG+CGG | 0.432398 | 3_1:-73800874 | None:intergenic |
| GAAGCTGCTGTCCTGTATCC+AGG | 0.445399 | 3_1:+73804385 | Msa0374360:CDS |
| ATCTGGGAAGTTTCTTTACA+AGG | 0.447611 | 3_1:+73804040 | Msa0374360:CDS |
| CAATTGAACCAGGTATTTCA+GGG | 0.451234 | 3_1:-73805794 | None:intergenic |
| TGCCAGCAGTCTCACATAAG+AGG | 0.453131 | 3_1:+73805430 | Msa0374360:CDS |
| CAAGTAGAAATACCTACATC+CGG | 0.465192 | 3_1:+73802852 | Msa0374360:CDS |
| TCCATGTGGTATAGGTTAAG+AGG | 0.465451 | 3_1:+73805264 | Msa0374360:intron |
| AGCGGAACAAAAGATAAATT+CGG | 0.469092 | 3_1:-73805906 | None:intergenic |
| TTGGCGCAATGCATGCTTGA+AGG | 0.473896 | 3_1:+73802332 | Msa0374360:CDS |
| AGGTTAAGAGGAACAACTAC+AGG | 0.479419 | 3_1:+73805276 | Msa0374360:intron |
| GGTCCCTTCTGAGTTGGAAT+CGG | 0.480778 | 3_1:+73801510 | Msa0374360:CDS |
| TTTCTACTTGCACTTCCAAA+AGG | 0.482993 | 3_1:-73801727 | None:intergenic |
| GCACTTCCAAAAGGCGCGAC+AGG | 0.483438 | 3_1:-73801718 | None:intergenic |
| GACATTCTTGGAGTCGTTGA+AGG | 0.484136 | 3_1:+73805375 | Msa0374360:CDS |
| AAAACAGTAGGTCGCATGCC+TGG | 0.485790 | 3_1:-73804403 | None:intergenic |
| ATGTGAGACTGCTGGCACAT+CGG | 0.486579 | 3_1:-73805424 | None:intergenic |
| TAGAACTGACTTCGTCAAAA+CGG | 0.493472 | 3_1:-73800914 | None:intergenic |
| TGCATGCTTGAAGGGTTGGC+AGG | 0.501973 | 3_1:+73802341 | Msa0374360:CDS |
| GGTTGTAATCCGAAAACATT+GGG | 0.515132 | 3_1:-73800820 | None:intergenic |
| TGGAGTCGTTGAAGGATGGC+AGG | 0.521728 | 3_1:+73805383 | Msa0374360:CDS |
| TAGGTCGCATGCCTGGATAC+AGG | 0.528585 | 3_1:-73804396 | None:intergenic |
| GCAATGCATGCTTGAAGGGT+TGG | 0.533926 | 3_1:+73802337 | Msa0374360:CDS |
| TTTAACGGTCCCTTCTGAGT+TGG | 0.534181 | 3_1:+73801504 | Msa0374360:CDS |
| TTGATCTCACTTGTCACTAG+TGG | 0.534671 | 3_1:+73805318 | Msa0374360:CDS |
| TCCACTCTGCAACTCCAACC+CGG | 0.540341 | 3_1:-73802871 | None:intergenic |
| TGGCGCAATGCATGCTTGAA+GGG | 0.540704 | 3_1:+73802333 | Msa0374360:CDS |
| TTCTTGGAGTCGTTGAAGGA+TGG | 0.542284 | 3_1:+73805379 | Msa0374360:CDS |
| CCCCTCTTATGTGAGACTGC+TGG | 0.544075 | 3_1:-73805432 | None:intergenic |
| TGTCTTTGTTCCATTTGAGG+AGG | 0.547210 | 3_1:+73805467 | Msa0374360:CDS |
| ATTCCGCGAAACCAAACCTC+TGG | 0.551803 | 3_1:+73800871 | Msa0374360:five_prime_UTR |
| GCCAGCAGTCTCACATAAGA+GGG | 0.555369 | 3_1:+73805431 | Msa0374360:CDS |
| AAATGTGGCTCTTACGGCCA+AGG | 0.555691 | 3_1:+73802504 | Msa0374360:CDS |
| TCAAATGGAACAAAGACAAA+GGG | 0.558084 | 3_1:-73805462 | None:intergenic |
| AAAACAGACTCTGTCTTTGG+TGG | 0.559204 | 3_1:+73804202 | Msa0374360:CDS |
| AACCTGACGCCATGAGTGAA+AGG | 0.560053 | 3_1:-73800997 | None:intergenic |
| GTTACAAGGAGGCCATGGCT+TGG | 0.560559 | 3_1:+73801562 | Msa0374360:CDS |
| AATCAAAATACGATGGCTCA+TGG | 0.565621 | 3_1:+73802477 | Msa0374360:CDS |
| TTCAGGGGCAGCATTCAACC+AGG | 0.571279 | 3_1:-73805778 | None:intergenic |
| ACTTTGTTACAAGGAGGCCA+TGG | 0.571990 | 3_1:+73801557 | Msa0374360:CDS |
| TTGTAAAGAAACTTCCCAGA+TGG | 0.574995 | 3_1:-73804038 | None:intergenic |
| CCATGAGTGAAAGGAAATTG+AGG | 0.575708 | 3_1:-73800988 | None:intergenic |
| AATGCTGCCCCTGAAATACC+TGG | 0.575749 | 3_1:+73805786 | Msa0374360:exon |
| CTCAAATGGAACAAAGACAA+AGG | 0.580041 | 3_1:-73805463 | None:intergenic |
| TGCAACTCCAACCCGGATGT+AGG | 0.586345 | 3_1:-73802864 | None:intergenic |
| ATGGCTCATGGCGGAAAATG+TGG | 0.589306 | 3_1:+73802489 | Msa0374360:CDS |
| TACAGGGGCTAACAATAGGA+TGG | 0.594300 | 3_1:+73805293 | Msa0374360:CDS |
| TTACCGTCAAATCGCAACCT+TGG | 0.595041 | 3_1:-73802521 | None:intergenic |
| TGAAAGGAAATTGAGGTGAA+AGG | 0.598779 | 3_1:-73800981 | None:intergenic |
| AAACCGATTCCAACTCAGAA+GGG | 0.600214 | 3_1:-73801513 | None:intergenic |
| TCGAATGACTCCATATGACA+TGG | 0.601277 | 3_1:+73802254 | Msa0374360:CDS |
| AATTTGCGTACTTGCATGTG+TGG | 0.602551 | 3_1:+73805851 | Msa0374360:three_prime_UTR |
| AGAAATACCTACATCCGGGT+TGG | 0.606217 | 3_1:+73802857 | Msa0374360:CDS |
| GGTTAAGAGGAACAACTACA+GGG | 0.606446 | 3_1:+73805277 | Msa0374360:intron |
| TTCTCAAAAGATCAAAGATG+TGG | 0.608842 | 3_1:+73804153 | Msa0374360:CDS |
| CTACACATTGACAGATGACA+AGG | 0.608992 | 3_1:+73804228 | Msa0374360:CDS |
| TGAGGCAAGTACATCTGAAG+AGG | 0.609172 | 3_1:+73805353 | Msa0374360:CDS |
| AAAACCGATTCCAACTCAGA+AGG | 0.609545 | 3_1:-73801514 | None:intergenic |
| TAGTGGTGTGGACACTAATG+AGG | 0.610301 | 3_1:+73805335 | Msa0374360:CDS |
| ATGCGTATCCTCAAAACAGT+AGG | 0.614318 | 3_1:-73804415 | None:intergenic |
| ATGCATTGCGCCAAAATACA+GGG | 0.615006 | 3_1:-73802323 | None:intergenic |
| GAGGTATTTACAATTGAACC+AGG | 0.615601 | 3_1:-73805804 | None:intergenic |
| CTCACTTGTCACTAGTGGTG+TGG | 0.615722 | 3_1:+73805323 | Msa0374360:CDS |
| CGGTTGTAATCCGAAAACAT+TGG | 0.624551 | 3_1:-73800821 | None:intergenic |
| TTTGGTTAAAGATCTTTATG+GGG | 0.625965 | 3_1:+73801684 | Msa0374360:intron |
| AAGTAGAAATACCTACATCC+GGG | 0.640220 | 3_1:+73802853 | Msa0374360:CDS |
| CGAATGACTCCATATGACAT+GGG | 0.647091 | 3_1:+73802255 | Msa0374360:CDS |
| ATACTTCAATCAAAATACGA+TGG | 0.652918 | 3_1:+73802470 | Msa0374360:CDS |
| GCGTTGTACATACCAAGCCA+TGG | 0.657436 | 3_1:-73801574 | None:intergenic |
| TTAACTACTTTGTTACAAGG+AGG | 0.664306 | 3_1:+73801551 | Msa0374360:CDS |
| AAAAGAGAAGAATCAACATG+AGG | 0.664765 | 3_1:-73801751 | None:intergenic |
| AATTGAACCAGGTATTTCAG+GGG | 0.670026 | 3_1:-73805793 | None:intergenic |
| TCTGACATGCACATGCCACA+CGG | 0.673940 | 3_1:-73800841 | None:intergenic |
| TCCGGGTTGGAGTTGCAGAG+TGG | 0.680422 | 3_1:+73802870 | Msa0374360:CDS |
| AATCACTAATCCAGTTCACG+TGG | 0.691915 | 3_1:+73802895 | Msa0374360:CDS |
| CCAGCAGTCTCACATAAGAG+GGG | 0.706035 | 3_1:+73805432 | Msa0374360:CDS |
| CATGAAATGATTCAGAACCA+CGG | 0.728651 | 3_1:-73800958 | None:intergenic |
| CAAAATACGATGGCTCATGG+CGG | 0.731935 | 3_1:+73802480 | Msa0374360:CDS |
| GTTAAGAGGAACAACTACAG+GGG | 0.746465 | 3_1:+73805278 | Msa0374360:CDS |
| GTATCAACGTAAGACACCAG+AGG | 0.750941 | 3_1:-73800887 | None:intergenic |
| GTGAGACTGCTGGCACATCG+GGG | 0.755204 | 3_1:-73805422 | None:intergenic |
| CTTGTGTGTGTCGAAAATGG+CGG | 0.757415 | 3_1:+73802286 | Msa0374360:CDS |
| AGTTACATAGGAGCACAAAG+CGG | 0.795708 | 3_1:-73805924 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATAATAATTTTAAATCAGA+TGG | + | chr3_1:73801428-73801447 | Msa0374360:intron | 10.0% |
| !!! | ATTCAAATCTTTAAAATCTT+TGG | + | chr3_1:73801113-73801132 | Msa0374360:intron | 15.0% |
| !!! | AATTTTCAACAATTTTAACA+TGG | + | chr3_1:73801156-73801175 | Msa0374360:intron | 15.0% |
| !!! | ATTTTCAACAATTTTAACAT+GGG | + | chr3_1:73801157-73801176 | Msa0374360:intron | 15.0% |
| !!! | TAAATTAATAATTTTGAGAC+CGG | + | chr3_1:73801196-73801215 | Msa0374360:intron | 15.0% |
| !! | TATTATTAATTAAGATGACA+CGG | - | chr3_1:73801415-73801434 | None:intergenic | 15.0% |
| !! | AACACAATAATAAATAAACA+TGG | - | chr3_1:73801605-73801624 | None:intergenic | 15.0% |
| !!! | TAAAAATAATATTCTGAAAG+TGG | + | chr3_1:73802717-73802736 | Msa0374360:intron | 15.0% |
| !! | GATATTAAATTGATAAATAG+TGG | - | chr3_1:73803041-73803060 | None:intergenic | 15.0% |
| !! | AATTGTTTACCTAAAAAAAA+AGG | + | chr3_1:73803146-73803165 | Msa0374360:intron | 15.0% |
| !!! | ATTTTAAAGCCTTTTTTTTT+AGG | - | chr3_1:73803158-73803177 | None:intergenic | 15.0% |
| !! | GCATTATTTAAATCTATATA+CGG | + | chr3_1:73804323-73804342 | Msa0374360:intron | 15.0% |
| !! | AATTTACATGTGATATTATT+TGG | - | chr3_1:73804780-73804799 | None:intergenic | 15.0% |
| !! | TATAAATATTGAAAGTTATG+AGG | - | chr3_1:73805826-73805845 | None:intergenic | 15.0% |
| !!! | AATCATATATCCTTTATTTT+TGG | + | chr3_1:73806088-73806107 | Msa0374360:three_prime_UTR | 15.0% |
| !!! | TTTTCAAATTCCAAAAATAA+AGG | - | chr3_1:73806101-73806120 | None:intergenic | 15.0% |
| !!! | AAAATCTAAAACAATGAAGA+AGG | - | chr3_1:73801062-73801081 | None:intergenic | 20.0% |
| !! | GCATATTACATAAATGAAAT+TGG | + | chr3_1:73801296-73801315 | Msa0374360:intron | 20.0% |
| !!! | CTTATTGTTTTTATGTGTTT+TGG | + | chr3_1:73801666-73801685 | Msa0374360:intron | 20.0% |
| !!! | TTTTGGTTAAAGATCTTTAT+GGG | + | chr3_1:73801683-73801702 | Msa0374360:intron | 20.0% |
| !!! | ATTTATTGAATACATTTTGC+AGG | + | chr3_1:73802224-73802243 | Msa0374360:intron | 20.0% |
| !! | AATAAAAAACTTAACCATCA+CGG | - | chr3_1:73802604-73802623 | None:intergenic | 20.0% |
| !! | TGGAAATTTATCGTATTTAA+AGG | + | chr3_1:73802645-73802664 | Msa0374360:intron | 20.0% |
| !! | AGACTAACAGAATTTAAAAA+AGG | - | chr3_1:73802966-73802985 | None:intergenic | 20.0% |
| !! | AATTGTAGTATTTGAATAGA+GGG | + | chr3_1:73803492-73803511 | Msa0374360:intron | 20.0% |
| !! | AACAATTATAATGGTTAACA+AGG | - | chr3_1:73803523-73803542 | None:intergenic | 20.0% |
| !! | TTAACCATTATAATTGTTGA+GGG | + | chr3_1:73803525-73803544 | Msa0374360:intron | 20.0% |
| !! | TTATTCATATGCTTAAAGAT+TGG | - | chr3_1:73803891-73803910 | None:intergenic | 20.0% |
| !! | TTCTTTACAAGGTTATAATT+TGG | + | chr3_1:73804051-73804070 | Msa0374360:intron | 20.0% |
| !! | TCATTATTTGTATATCTACT+AGG | + | chr3_1:73804274-73804293 | Msa0374360:intron | 20.0% |
| !! | AGAATTATGTATTATTAGTG+AGG | + | chr3_1:73804611-73804630 | Msa0374360:intron | 20.0% |
| !! | TCACTTAATATAAGTTAGAA+TGG | + | chr3_1:73804860-73804879 | Msa0374360:intron | 20.0% |
| !!! | ATTTTTTTAGCTTACAGAAA+AGG | - | chr3_1:73805138-73805157 | None:intergenic | 20.0% |
| !! | AACAAATTGAGACAATATTT+AGG | - | chr3_1:73805552-73805571 | None:intergenic | 20.0% |
| !!! | CTATAGTATTTTTCTATTTG+AGG | + | chr3_1:73805601-73805620 | Msa0374360:intron | 20.0% |
| !!! | AACATGGGTTTTAAATTTGT+TGG | + | chr3_1:73801172-73801191 | Msa0374360:intron | 25.0% |
| !!! | ACATGGGTTTTAAATTTGTT+GGG | + | chr3_1:73801173-73801192 | Msa0374360:intron | 25.0% |
| !! | GTTTGTAGATTTTGCTTTAA+CGG | + | chr3_1:73801489-73801508 | Msa0374360:intron | 25.0% |
| !!! | GTTTTGGTTAAAGATCTTTA+TGG | + | chr3_1:73801682-73801701 | Msa0374360:intron | 25.0% |
| ! | TTTGGTTAAAGATCTTTATG+GGG | + | chr3_1:73801684-73801703 | Msa0374360:intron | 25.0% |
| ! | ATGTATGTAACTACACTATT+TGG | + | chr3_1:73801825-73801844 | Msa0374360:intron | 25.0% |
| ! | TACACTTGAAACTTAAAAGA+AGG | + | chr3_1:73802013-73802032 | Msa0374360:intron | 25.0% |
| ! | CTGTTCTTAAAATAAGAATC+AGG | + | chr3_1:73802146-73802165 | Msa0374360:intron | 25.0% |
| ! | ATAAGAATCAGGAAAGTTTA+TGG | + | chr3_1:73802157-73802176 | Msa0374360:intron | 25.0% |
| ! | CAAGTCTAATTTCTGATTAT+GGG | + | chr3_1:73802406-73802425 | Msa0374360:intron | 25.0% |
| ! | AAGTCTAATTTCTGATTATG+GGG | + | chr3_1:73802407-73802426 | Msa0374360:intron | 25.0% |
| ! | ATACTTCAATCAAAATACGA+TGG | + | chr3_1:73802470-73802489 | Msa0374360:CDS | 25.0% |
| ! | ATAAAAAACTTAACCATCAC+GGG | - | chr3_1:73802603-73802622 | None:intergenic | 25.0% |
| ! | ACAAAATAGTAGAACAGAAA+AGG | - | chr3_1:73802786-73802805 | None:intergenic | 25.0% |
| !!! | TATGCCAATTAGTCTTATTA+TGG | + | chr3_1:73802807-73802826 | Msa0374360:intron | 25.0% |
| ! | TGAAAACCTCATGAATTAAA+AGG | + | chr3_1:73803227-73803246 | Msa0374360:intron | 25.0% |
| ! | TCATGCTGAAAATGAATTTA+AGG | + | chr3_1:73803266-73803285 | Msa0374360:intron | 25.0% |
| ! | GAATTGTAGTATTTGAATAG+AGG | + | chr3_1:73803491-73803510 | Msa0374360:intron | 25.0% |
| ! | GTTAACCATTATAATTGTTG+AGG | + | chr3_1:73803524-73803543 | Msa0374360:intron | 25.0% |
| ! | TAACCATTATAATTGTTGAG+GGG | + | chr3_1:73803526-73803545 | Msa0374360:intron | 25.0% |
| ! | TGTAAATTTATGTTTACCGA+TGG | - | chr3_1:73803766-73803785 | None:intergenic | 25.0% |
| ! | TCGGTAAACATAAATTTACA+AGG | + | chr3_1:73803766-73803785 | Msa0374360:intron | 25.0% |
| !! | TGTTAACTTAACCTTTTAAC+AGG | - | chr3_1:73804474-73804493 | None:intergenic | 25.0% |
| ! | AAACTAATATTTAGCACAAG+TGG | + | chr3_1:73805162-73805181 | Msa0374360:intron | 25.0% |
| ! | ATATATAAGCATAGTGCAAA+AGG | - | chr3_1:73805241-73805260 | None:intergenic | 25.0% |
| ! | ACAAAAAGGCAAAAATGTAA+GGG | - | chr3_1:73805703-73805722 | None:intergenic | 25.0% |
| ! | TACAAAAAGGCAAAAATGTA+AGG | - | chr3_1:73805704-73805723 | None:intergenic | 25.0% |
| !! | ACATTTTTGCCTTTTTGTAT+AGG | + | chr3_1:73805705-73805724 | Msa0374360:intron | 25.0% |
| !! | ATAATAATCCATTTTCTCCA+CGG | - | chr3_1:73805755-73805774 | None:intergenic | 25.0% |
| !!! | AAAATGGATTATTATGTTCC+TGG | + | chr3_1:73805760-73805779 | Msa0374360:CDS | 25.0% |
| ! | CTCCTATGTAACTATAAAAA+CGG | + | chr3_1:73805934-73805953 | Msa0374360:three_prime_UTR | 25.0% |
| !!! | AACCGTTTTTATAGTTACAT+AGG | - | chr3_1:73805939-73805958 | None:intergenic | 25.0% |
| ! | ATAAAAACGGTTTGTACATA+AGG | + | chr3_1:73805947-73805966 | Msa0374360:three_prime_UTR | 25.0% |
| ! | TAAAAACGGTTTGTACATAA+GGG | + | chr3_1:73805948-73805967 | Msa0374360:three_prime_UTR | 25.0% |
| !! | AGTTAAACACATGATTTGTA+TGG | - | chr3_1:73806052-73806071 | None:intergenic | 25.0% |
| ! | TCAATTTTCAATAGATACCG+TGG | + | chr3_1:73800941-73800960 | Msa0374360:five_prime_UTR | 30.0% |
| ACAATTAGCGCAATAATAGA+TGG | - | chr3_1:73801092-73801111 | None:intergenic | 30.0% | |
| TTCAGCTGAATATTCATTTG+AGG | + | chr3_1:73801223-73801242 | Msa0374360:intron | 30.0% | |
| ATTGGAAAGATTATGTCCAT+AGG | + | chr3_1:73801314-73801333 | Msa0374360:intron | 30.0% | |
| AGAATTTGAACTATGTCACA+AGG | - | chr3_1:73801366-73801385 | None:intergenic | 30.0% | |
| CTGTTAACTACTTTGTTACA+AGG | + | chr3_1:73801548-73801567 | Msa0374360:CDS | 30.0% | |
| TTAACTACTTTGTTACAAGG+AGG | + | chr3_1:73801551-73801570 | Msa0374360:CDS | 30.0% | |
| AAAAGAGAAGAATCAACATG+AGG | - | chr3_1:73801754-73801773 | None:intergenic | 30.0% | |
| !!! | TGGTCATGACTTTTTTGATA+TGG | + | chr3_1:73801845-73801864 | Msa0374360:intron | 30.0% |
| !!! | ATGACTTTTTTGATATGGTG+TGG | + | chr3_1:73801850-73801869 | Msa0374360:intron | 30.0% |
| !!! | TGACTTTTTTGATATGGTGT+GGG | + | chr3_1:73801851-73801870 | Msa0374360:intron | 30.0% |
| TCATGTACGATATTTGATGT+GGG | + | chr3_1:73801936-73801955 | Msa0374360:intron | 30.0% | |
| ATATTTGATGTGGGTATGTT+TGG | + | chr3_1:73801945-73801964 | Msa0374360:intron | 30.0% | |
| ! | TTAAGTTTCAAGTGTACGAA+GGG | - | chr3_1:73802009-73802028 | None:intergenic | 30.0% |
| ! | TTTAAGTTTCAAGTGTACGA+AGG | - | chr3_1:73802010-73802029 | None:intergenic | 30.0% |
| CACAACTTATTGACAGTATT+TGG | + | chr3_1:73802085-73802104 | Msa0374360:intron | 30.0% | |
| GCAAGTCTAATTTCTGATTA+TGG | + | chr3_1:73802405-73802424 | Msa0374360:intron | 30.0% | |
| TAGTTGAAACAAATGCTGTA+TGG | + | chr3_1:73802625-73802644 | Msa0374360:intron | 30.0% | |
| !!! | TTATTTTTAGTCTTGTGCAG+TGG | - | chr3_1:73802706-73802725 | None:intergenic | 30.0% |
| AGGACCATAATAAGACTAAT+TGG | - | chr3_1:73802814-73802833 | None:intergenic | 30.0% | |
| AAGGATATCTATTTCGTAGT+AGG | - | chr3_1:73802947-73802966 | None:intergenic | 30.0% | |
| TTCATTGTTAGATCTGCATT+CGG | + | chr3_1:73802989-73803008 | Msa0374360:intron | 30.0% | |
| !!! | GATCAGAAACTAGTTTTATG+AGG | + | chr3_1:73803098-73803117 | Msa0374360:intron | 30.0% |
| ! | ATTGTTTTCATGCAAACACT+AGG | + | chr3_1:73803176-73803195 | Msa0374360:intron | 30.0% |
| ! | TTGTTTTCATGCAAACACTA+GGG | + | chr3_1:73803177-73803196 | Msa0374360:intron | 30.0% |
| !! | TCAGATCCTTTTAATTCATG+AGG | - | chr3_1:73803236-73803255 | None:intergenic | 30.0% |
| ! | TTATTTTCCTATACTCTGCA+GGG | - | chr3_1:73803363-73803382 | None:intergenic | 30.0% |
| TTGTATTGTCCTTGATATAG+CGG | + | chr3_1:73803563-73803582 | Msa0374360:intron | 30.0% | |
| GAGGAATTCCATGTAAAAAT+TGG | + | chr3_1:73803629-73803648 | Msa0374360:intron | 30.0% | |
| ! | CTGGAAAACCAATTTTTACA+TGG | - | chr3_1:73803640-73803659 | None:intergenic | 30.0% |
| ! | TTCATCTAAGCATTGCATTT+AGG | + | chr3_1:73803811-73803830 | Msa0374360:intron | 30.0% |
| TACTTCACAAGATTTACTCA+TGG | - | chr3_1:73803932-73803951 | None:intergenic | 30.0% | |
| TTCTCAAAAGATCAAAGATG+TGG | + | chr3_1:73804153-73804172 | Msa0374360:CDS | 30.0% | |
| AAATCTATATACGGATCTTG+AGG | + | chr3_1:73804332-73804351 | Msa0374360:intron | 30.0% | |
| TTTAACAGGATATGCTATCA+AGG | - | chr3_1:73804460-73804479 | None:intergenic | 30.0% | |
| TGATAGCATATCCTGTTAAA+AGG | + | chr3_1:73804460-73804479 | Msa0374360:intron | 30.0% | |
| ! | GGAATACAAAGTTTCTTTTC+TGG | - | chr3_1:73804504-73804523 | None:intergenic | 30.0% |
| ! | AGGAACAATTACCATTTTGT+TGG | + | chr3_1:73804653-73804672 | Msa0374360:intron | 30.0% |
| ! | ACAATTACCATTTTGTTGGT+TGG | + | chr3_1:73804657-73804676 | Msa0374360:intron | 30.0% |
| !!! | ATTTTGTAGACTTGTTAAGG+TGG | - | chr3_1:73804841-73804860 | None:intergenic | 30.0% |
| !!! | GTGATTTTGTAGACTTGTTA+AGG | - | chr3_1:73804844-73804863 | None:intergenic | 30.0% |
| AAGTGATGTAAGATAGAGAA+GGG | - | chr3_1:73804919-73804938 | None:intergenic | 30.0% | |
| TAAGTGATGTAAGATAGAGA+AGG | - | chr3_1:73804920-73804939 | None:intergenic | 30.0% | |
| !!! | ACGCAATCAAAACTTTTTCA+CGG | - | chr3_1:73804960-73804979 | None:intergenic | 30.0% |
| AACAGTTGTGTACTTAAGAA+TGG | + | chr3_1:73804987-73805006 | Msa0374360:intron | 30.0% | |
| ATGTAGGTAGAATTTGAACA+AGG | + | chr3_1:73805051-73805070 | Msa0374360:intron | 30.0% | |
| ! | AAGGAAAGTATGCAGTTTAT+TGG | + | chr3_1:73805070-73805089 | Msa0374360:intron | 30.0% |
| TGATTCTCTGGTCTAATATT+TGG | - | chr3_1:73805190-73805209 | None:intergenic | 30.0% | |
| TGCTTATATATATCTCCATG+TGG | + | chr3_1:73805250-73805269 | Msa0374360:intron | 30.0% | |
| TATATATCTCCATGTGGTAT+AGG | + | chr3_1:73805256-73805275 | Msa0374360:intron | 30.0% | |
| TCAAATGGAACAAAGACAAA+GGG | - | chr3_1:73805465-73805484 | None:intergenic | 30.0% | |
| CAAAAAGGCAAAAATGTAAG+GGG | - | chr3_1:73805702-73805721 | None:intergenic | 30.0% | |
| ! | TTTTTGCCTTTTTGTATAGG+TGG | + | chr3_1:73805708-73805727 | Msa0374360:intron | 30.0% |
| ! | TAATAATCCATTTTCTCCAC+GGG | - | chr3_1:73805754-73805773 | None:intergenic | 30.0% |
| AGCGGAACAAAAGATAAATT+CGG | - | chr3_1:73805909-73805928 | None:intergenic | 30.0% | |
| GGTTGTAATCCGAAAACATT+GGG | - | chr3_1:73800823-73800842 | None:intergenic | 35.0% | |
| ! | TAGAACTGACTTCGTCAAAA+CGG | - | chr3_1:73800917-73800936 | None:intergenic | 35.0% |
| CATGAAATGATTCAGAACCA+CGG | - | chr3_1:73800961-73800980 | None:intergenic | 35.0% | |
| TGAAAGGAAATTGAGGTGAA+AGG | - | chr3_1:73800984-73801003 | None:intergenic | 35.0% | |
| CTAAAACAATGAAGAAGGTG+CGG | - | chr3_1:73801057-73801076 | None:intergenic | 35.0% | |
| AGTTCAAATTCTCTCCTAGA+CGG | + | chr3_1:73801374-73801393 | Msa0374360:intron | 35.0% | |
| ! | TCATCATTTTACAACCGTCT+AGG | - | chr3_1:73801391-73801410 | None:intergenic | 35.0% |
| TTTCTACTTGCACTTCCAAA+AGG | - | chr3_1:73801730-73801749 | None:intergenic | 35.0% | |
| CTCATGTACGATATTTGATG+TGG | + | chr3_1:73801935-73801954 | Msa0374360:intron | 35.0% | |
| ! | CAATTCGTAACCCTGTATTT+TGG | + | chr3_1:73802313-73802332 | Msa0374360:CDS | 35.0% |
| AATCAAAATACGATGGCTCA+TGG | + | chr3_1:73802477-73802496 | Msa0374360:CDS | 35.0% | |
| AATATGAGGGGCAAGAAATA+AGG | - | chr3_1:73802571-73802590 | None:intergenic | 35.0% | |
| ! | TAAAGGTGTGATTCTCTTCT+AGG | + | chr3_1:73802662-73802681 | Msa0374360:intron | 35.0% |
| TTATTATGGTCCTGCATCAT+AGG | + | chr3_1:73802821-73802840 | Msa0374360:intron | 35.0% | |
| CAAGTAGAAATACCTACATC+CGG | + | chr3_1:73802852-73802871 | Msa0374360:CDS | 35.0% | |
| AAGTAGAAATACCTACATCC+GGG | + | chr3_1:73802853-73802872 | Msa0374360:CDS | 35.0% | |
| ! | TCCATGAAACTCTAGAGAAA+TGG | + | chr3_1:73803309-73803328 | Msa0374360:intron | 35.0% |
| !! | TCCATTTCTCTAGAGTTTCA+TGG | - | chr3_1:73803313-73803332 | None:intergenic | 35.0% |
| !! | CTTATTTTCCTATACTCTGC+AGG | - | chr3_1:73803364-73803383 | None:intergenic | 35.0% |
| ! | TTGGGCATGTCAAAGAATTT+TGG | + | chr3_1:73803426-73803445 | Msa0374360:intron | 35.0% |
| TGTGACTGACTAATTAAGCA+GGG | - | chr3_1:73803469-73803488 | None:intergenic | 35.0% | |
| !! | AAAAGCATTCCGCTATATCA+AGG | - | chr3_1:73803575-73803594 | None:intergenic | 35.0% |
| ! | GTGTTTTTCATCCTCATAGA+TGG | + | chr3_1:73803607-73803626 | Msa0374360:intron | 35.0% |
| ! | TTTTTCATCCTCATAGATGG+AGG | + | chr3_1:73803610-73803629 | Msa0374360:intron | 35.0% |
| TAAAACACACCTTCTGATGA+AGG | - | chr3_1:73803669-73803688 | None:intergenic | 35.0% | |
| CATATGGTATATCCACTATC+CGG | - | chr3_1:73803725-73803744 | None:intergenic | 35.0% | |
| TGGATATACCATATGCTATC+TGG | + | chr3_1:73803730-73803749 | Msa0374360:intron | 35.0% | |
| ! | ATCTAAGCATTGCATTTAGG+AGG | + | chr3_1:73803814-73803833 | Msa0374360:intron | 35.0% |
| ATAACAGACCTGCAGAATAT+GGG | - | chr3_1:73803997-73804016 | None:intergenic | 35.0% | |
| AATAACAGACCTGCAGAATA+TGG | - | chr3_1:73803998-73804017 | None:intergenic | 35.0% | |
| ATGGAAAAAATCTCAGGTAC+CGG | - | chr3_1:73804022-73804041 | None:intergenic | 35.0% | |
| !!! | TACCTGAGATTTTTTCCATC+TGG | + | chr3_1:73804023-73804042 | Msa0374360:CDS | 35.0% |
| !!! | ACCTGAGATTTTTTCCATCT+GGG | + | chr3_1:73804024-73804043 | Msa0374360:CDS | 35.0% |
| TTGTAAAGAAACTTCCCAGA+TGG | - | chr3_1:73804041-73804060 | None:intergenic | 35.0% | |
| ATCTGGGAAGTTTCTTTACA+AGG | + | chr3_1:73804040-73804059 | Msa0374360:CDS | 35.0% | |
| GTTCTCATACAATCACATAC+AGG | - | chr3_1:73804112-73804131 | None:intergenic | 35.0% | |
| GCTATTGATATCATCATTGC+AGG | + | chr3_1:73804360-73804379 | Msa0374360:intron | 35.0% | |
| GAAACTTTGTATTCCCTATC+TGG | + | chr3_1:73804509-73804528 | Msa0374360:intron | 35.0% | |
| TTTGTATTCCCTATCTGGTT+AGG | + | chr3_1:73804514-73804533 | Msa0374360:intron | 35.0% | |
| AAATCCAACCTAACCAGATA+GGG | - | chr3_1:73804525-73804544 | None:intergenic | 35.0% | |
| TTGATCTATTCTCTTAGCAG+AGG | - | chr3_1:73804563-73804582 | None:intergenic | 35.0% | |
| GCTTCTTCTAATGCTTTAAC+AGG | + | chr3_1:73804633-73804652 | Msa0374360:intron | 35.0% | |
| ATGAATGCCAACCAACAAAA+TGG | - | chr3_1:73804667-73804686 | None:intergenic | 35.0% | |
| GTTGGTTGGCATTCATTAAT+TGG | + | chr3_1:73804671-73804690 | Msa0374360:intron | 35.0% | |
| TTCATTAATCCTCATCTACC+AGG | + | chr3_1:73804798-73804817 | Msa0374360:intron | 35.0% | |
| TCATTAATCCTCATCTACCA+GGG | + | chr3_1:73804799-73804818 | Msa0374360:intron | 35.0% | |
| ! | GGTCGATCACAATTACATTT+TGG | - | chr3_1:73804898-73804917 | None:intergenic | 35.0% |
| CTATCTTACATCACTTACAC+TGG | + | chr3_1:73804923-73804942 | Msa0374360:intron | 35.0% | |
| ! | GTTTATTAGCCTCTGAATGT+AGG | + | chr3_1:73805035-73805054 | Msa0374360:intron | 35.0% |
| CAAATTCTACCTACATTCAG+AGG | - | chr3_1:73805047-73805066 | None:intergenic | 35.0% | |
| CAAACGTGTCAAAAAAGAGT+TGG | + | chr3_1:73805210-73805229 | Msa0374360:intron | 35.0% | |
| CTCAAATGGAACAAAGACAA+AGG | - | chr3_1:73805466-73805485 | None:intergenic | 35.0% | |
| CTTTGTCTTTGTTCCATTTG+AGG | + | chr3_1:73805464-73805483 | Msa0374360:CDS | 35.0% | |
| TAAAACTGTACCTCCTCAAA+TGG | - | chr3_1:73805480-73805499 | None:intergenic | 35.0% | |
| ATGTCTCCACCTATACAAAA+AGG | - | chr3_1:73805717-73805736 | None:intergenic | 35.0% | |
| AATTGAACCAGGTATTTCAG+GGG | - | chr3_1:73805796-73805815 | None:intergenic | 35.0% | |
| CAATTGAACCAGGTATTTCA+GGG | - | chr3_1:73805797-73805816 | None:intergenic | 35.0% | |
| ACAATTGAACCAGGTATTTC+AGG | - | chr3_1:73805798-73805817 | None:intergenic | 35.0% | |
| ! | GAGGTATTTACAATTGAACC+AGG | - | chr3_1:73805807-73805826 | None:intergenic | 35.0% |
| ! | AGTACGGTACCCAATGTTTT+CGG | + | chr3_1:73800811-73800830 | Msa0374360:five_prime_UTR | 40.0% |
| CGGTTGTAATCCGAAAACAT+TGG | - | chr3_1:73800824-73800843 | None:intergenic | 40.0% | |
| CCATGAGTGAAAGGAAATTG+AGG | - | chr3_1:73800991-73801010 | None:intergenic | 40.0% | |
| CCTCAATTTCCTTTCACTCA+TGG | + | chr3_1:73800988-73801007 | Msa0374360:exon | 40.0% | |
| ! | GAATATTCAGCTGAAAGCAC+CGG | - | chr3_1:73801218-73801237 | None:intergenic | 40.0% |
| AACAATGAGCTGAAAGCCTA+TGG | - | chr3_1:73801333-73801352 | None:intergenic | 40.0% | |
| ! | AAACCGATTCCAACTCAGAA+GGG | - | chr3_1:73801516-73801535 | None:intergenic | 40.0% |
| ! | AAAACCGATTCCAACTCAGA+AGG | - | chr3_1:73801517-73801536 | None:intergenic | 40.0% |
| ! | GTACATGAGCTATCTGAAGT+AGG | - | chr3_1:73801924-73801943 | None:intergenic | 40.0% |
| CTCAAATCCGTTAGAACCAA+CGG | - | chr3_1:73802118-73802137 | None:intergenic | 40.0% | |
| TCGAATGACTCCATATGACA+TGG | + | chr3_1:73802254-73802273 | Msa0374360:CDS | 40.0% | |
| CGAATGACTCCATATGACAT+GGG | + | chr3_1:73802255-73802274 | Msa0374360:CDS | 40.0% | |
| ATGCATTGCGCCAAAATACA+GGG | - | chr3_1:73802326-73802345 | None:intergenic | 40.0% | |
| !!! | GGCTTTTTTATGAAGCTCTC+TGG | + | chr3_1:73802428-73802447 | Msa0374360:intron | 40.0% |
| !! | TTTTATGAAGCTCTCTGGAG+CGG | + | chr3_1:73802433-73802452 | Msa0374360:intron | 40.0% |
| TTCTTGCCCCTCATATTGAT+TGG | + | chr3_1:73802574-73802593 | Msa0374360:intron | 40.0% | |
| TGCATAAAGACCTATGATGC+AGG | - | chr3_1:73802834-73802853 | None:intergenic | 40.0% | |
| AATCACTAATCCAGTTCACG+TGG | + | chr3_1:73802895-73802914 | Msa0374360:CDS | 40.0% | |
| ! | GGGTGTTACACACTTTATAG+AGG | - | chr3_1:73803398-73803417 | None:intergenic | 40.0% |
| !! | TGTAACACCCAAGAGTGTTT+GGG | + | chr3_1:73803408-73803427 | Msa0374360:intron | 40.0% |
| CTGTGACTGACTAATTAAGC+AGG | - | chr3_1:73803470-73803489 | None:intergenic | 40.0% | |
| GTGCCCCTCAACAATTATAA+TGG | - | chr3_1:73803532-73803551 | None:intergenic | 40.0% | |
| ! | TTATAATTGTTGAGGGGCAC+TGG | + | chr3_1:73803532-73803551 | Msa0374360:intron | 40.0% |
| ATGGAATTCCTCCATCTATG+AGG | - | chr3_1:73803621-73803640 | None:intergenic | 40.0% | |
| ACTCATCTATTCCTTGTGTG+TGG | + | chr3_1:73803688-73803707 | Msa0374360:intron | 40.0% | |
| AAGAGGAACCAGATAGCATA+TGG | - | chr3_1:73803741-73803760 | None:intergenic | 40.0% | |
| TATGTTTACCGATGGCAAAG+AGG | - | chr3_1:73803758-73803777 | None:intergenic | 40.0% | |
| TAACAGACCTGCAGAATATG+GGG | - | chr3_1:73803996-73804015 | None:intergenic | 40.0% | |
| TTCTGCAGGTCTGTTATTAC+CGG | + | chr3_1:73804000-73804019 | Msa0374360:intron | 40.0% | |
| TCCCAGATGGAAAAAATCTC+AGG | - | chr3_1:73804028-73804047 | None:intergenic | 40.0% | |
| ! | ACCAAAGACAGAGTCTGTTT+TGG | - | chr3_1:73804203-73804222 | None:intergenic | 40.0% |
| AAAACAGACTCTGTCTTTGG+TGG | + | chr3_1:73804202-73804221 | Msa0374360:CDS | 40.0% | |
| CTACACATTGACAGATGACA+AGG | + | chr3_1:73804228-73804247 | Msa0374360:CDS | 40.0% | |
| ATGCGTATCCTCAAAACAGT+AGG | - | chr3_1:73804418-73804437 | None:intergenic | 40.0% | |
| TATTCCCTATCTGGTTAGGT+TGG | + | chr3_1:73804518-73804537 | Msa0374360:intron | 40.0% | |
| CAAATCCAACCTAACCAGAT+AGG | - | chr3_1:73804526-73804545 | None:intergenic | 40.0% | |
| GTTGTGATATAACATAGCCC+TGG | - | chr3_1:73804819-73804838 | None:intergenic | 40.0% | |
| TTGACACGTTTGTGATTCTC+TGG | - | chr3_1:73805202-73805221 | None:intergenic | 40.0% | |
| TCCATGTGGTATAGGTTAAG+AGG | + | chr3_1:73805264-73805283 | Msa0374360:intron | 40.0% | |
| TCCTCTTAACCTATACCACA+TGG | - | chr3_1:73805268-73805287 | None:intergenic | 40.0% | |
| AGGTTAAGAGGAACAACTAC+AGG | + | chr3_1:73805276-73805295 | Msa0374360:intron | 40.0% | |
| GGTTAAGAGGAACAACTACA+GGG | + | chr3_1:73805277-73805296 | Msa0374360:intron | 40.0% | |
| GTTAAGAGGAACAACTACAG+GGG | + | chr3_1:73805278-73805297 | Msa0374360:CDS | 40.0% | |
| TTGATCTCACTTGTCACTAG+TGG | + | chr3_1:73805318-73805337 | Msa0374360:CDS | 40.0% | |
| ACATCTGAAGAGGACATTCT+TGG | + | chr3_1:73805363-73805382 | Msa0374360:CDS | 40.0% | |
| TGTCTTTGTTCCATTTGAGG+AGG | + | chr3_1:73805467-73805486 | Msa0374360:CDS | 40.0% | |
| ! | ATCTCTTTTGAATTTGCCCG+TGG | + | chr3_1:73805735-73805754 | Msa0374360:CDS | 40.0% |
| AATTTGCGTACTTGCATGTG+TGG | + | chr3_1:73805851-73805870 | Msa0374360:three_prime_UTR | 40.0% | |
| ! | AGTTACATAGGAGCACAAAG+CGG | - | chr3_1:73805927-73805946 | None:intergenic | 40.0% |
| ! | GTTTTCGGATTACAACCGTG+TGG | + | chr3_1:73800826-73800845 | Msa0374360:five_prime_UTR | 45.0% |
| AACGTAAGACACCAGAGGTT+TGG | - | chr3_1:73800885-73800904 | None:intergenic | 45.0% | |
| GTATCAACGTAAGACACCAG+AGG | - | chr3_1:73800890-73800909 | None:intergenic | 45.0% | |
| GACACACTTCGACATCAAAC+AGG | - | chr3_1:73801458-73801477 | None:intergenic | 45.0% | |
| TTTAACGGTCCCTTCTGAGT+TGG | + | chr3_1:73801504-73801523 | Msa0374360:CDS | 45.0% | |
| !! | CTGAGTTGGAATCGGTTTTG+AGG | + | chr3_1:73801518-73801537 | Msa0374360:CDS | 45.0% |
| ACTTTGTTACAAGGAGGCCA+TGG | + | chr3_1:73801557-73801576 | Msa0374360:CDS | 45.0% | |
| !! | GTGGGACTAGTTACAATGTG+CGG | + | chr3_1:73801869-73801888 | Msa0374360:intron | 45.0% |
| !! | TGGGACTAGTTACAATGTGC+GGG | + | chr3_1:73801870-73801889 | Msa0374360:intron | 45.0% |
| !! | AGTATTTGGTGCATCACCGT+TGG | + | chr3_1:73802099-73802118 | Msa0374360:intron | 45.0% |
| !! | TGCATCACCGTTGGTTCTAA+CGG | + | chr3_1:73802108-73802127 | Msa0374360:intron | 45.0% |
| ! | GAGGCTTTTCCCATGTCATA+TGG | - | chr3_1:73802267-73802286 | None:intergenic | 45.0% |
| ! | CCATTTTCGACACACACAAG+AGG | - | chr3_1:73802286-73802305 | None:intergenic | 45.0% |
| CCTCTTGTGTGTGTCGAAAA+TGG | + | chr3_1:73802283-73802302 | Msa0374360:CDS | 45.0% | |
| CTTGTGTGTGTCGAAAATGG+CGG | + | chr3_1:73802286-73802305 | Msa0374360:CDS | 45.0% | |
| CATGCATTGCGCCAAAATAC+AGG | - | chr3_1:73802327-73802346 | None:intergenic | 45.0% | |
| CAAAATACGATGGCTCATGG+CGG | + | chr3_1:73802480-73802499 | Msa0374360:CDS | 45.0% | |
| TTACCGTCAAATCGCAACCT+TGG | - | chr3_1:73802524-73802543 | None:intergenic | 45.0% | |
| GGGTCACCAATCAATATGAG+GGG | - | chr3_1:73802583-73802602 | None:intergenic | 45.0% | |
| CGGGTCACCAATCAATATGA+GGG | - | chr3_1:73802584-73802603 | None:intergenic | 45.0% | |
| ACGGGTCACCAATCAATATG+AGG | - | chr3_1:73802585-73802604 | None:intergenic | 45.0% | |
| ! | TATTGATTGGTGACCCGTGA+TGG | + | chr3_1:73802587-73802606 | Msa0374360:intron | 45.0% |
| !! | TTAGTCTTGTGCAGTGGAGA+GGG | - | chr3_1:73802700-73802719 | None:intergenic | 45.0% |
| !! | TTTAGTCTTGTGCAGTGGAG+AGG | - | chr3_1:73802701-73802720 | None:intergenic | 45.0% |
| AGAAATACCTACATCCGGGT+TGG | + | chr3_1:73802857-73802876 | Msa0374360:CDS | 45.0% | |
| TGAATGCATACCACGTGAAC+TGG | - | chr3_1:73802908-73802927 | None:intergenic | 45.0% | |
| !! | GTGTAACACCCAAGAGTGTT+TGG | + | chr3_1:73803407-73803426 | Msa0374360:intron | 45.0% |
| TGACATGCCCAAACACTCTT+GGG | - | chr3_1:73803418-73803437 | None:intergenic | 45.0% | |
| TTGACATGCCCAAACACTCT+TGG | - | chr3_1:73803419-73803438 | None:intergenic | 45.0% | |
| CTATTCCTTGTGTGTGGTGT+TGG | + | chr3_1:73803694-73803713 | Msa0374360:intron | 45.0% | |
| ATCAACCAACACCACACACA+AGG | - | chr3_1:73803702-73803721 | None:intergenic | 45.0% | |
| ! | ATCTGGTTCCTCTTTGCCAT+CGG | + | chr3_1:73803747-73803766 | Msa0374360:intron | 45.0% |
| AATTTCCCCCCATATTCTGC+AGG | + | chr3_1:73803986-73804005 | Msa0374360:intron | 45.0% | |
| AACAGACCTGCAGAATATGG+GGG | - | chr3_1:73803995-73804014 | None:intergenic | 45.0% | |
| GCCAAAACAGACTCTGTCTT+TGG | + | chr3_1:73804199-73804218 | Msa0374360:CDS | 45.0% | |
| !!! | CTGTTTTGAGGATACGCATG+AGG | + | chr3_1:73804419-73804438 | Msa0374360:CDS | 45.0% |
| TGAGGATACGCATGAGGTAA+TGG | + | chr3_1:73804425-73804444 | Msa0374360:intron | 45.0% | |
| TCTCTTAGCAGAGGACATAC+TGG | - | chr3_1:73804554-73804573 | None:intergenic | 45.0% | |
| TAACATAGCCCTGGTAGATG+AGG | - | chr3_1:73804810-73804829 | None:intergenic | 45.0% | |
| CAACTACAGGGGCTAACAAT+AGG | + | chr3_1:73805289-73805308 | Msa0374360:CDS | 45.0% | |
| TACAGGGGCTAACAATAGGA+TGG | + | chr3_1:73805293-73805312 | Msa0374360:CDS | 45.0% | |
| TAGTGGTGTGGACACTAATG+AGG | + | chr3_1:73805335-73805354 | Msa0374360:CDS | 45.0% | |
| TGAGGCAAGTACATCTGAAG+AGG | + | chr3_1:73805353-73805372 | Msa0374360:CDS | 45.0% | |
| GACATTCTTGGAGTCGTTGA+AGG | + | chr3_1:73805375-73805394 | Msa0374360:CDS | 45.0% | |
| TTCTTGGAGTCGTTGAAGGA+TGG | + | chr3_1:73805379-73805398 | Msa0374360:CDS | 45.0% | |
| GAATTTGCCCGTGGAGAAAA+TGG | + | chr3_1:73805744-73805763 | Msa0374360:CDS | 45.0% | |
| !!! | ATTCATATATAATTTTAAAT+AGG | - | chr3_1:73803850-73803869 | None:intergenic | 5.0% |
| TCTGACATGCACATGCCACA+CGG | - | chr3_1:73800844-73800863 | None:intergenic | 50.0% | |
| ATTCCGCGAAACCAAACCTC+TGG | + | chr3_1:73800871-73800890 | Msa0374360:five_prime_UTR | 50.0% | |
| ! | ACACCAGAGGTTTGGTTTCG+CGG | - | chr3_1:73800877-73800896 | None:intergenic | 50.0% |
| TTCCTTTCACTCATGGCGTC+AGG | + | chr3_1:73800995-73801014 | Msa0374360:exon | 50.0% | |
| AACCTGACGCCATGAGTGAA+AGG | - | chr3_1:73801000-73801019 | None:intergenic | 50.0% | |
| ! | GGTCCCTTCTGAGTTGGAAT+CGG | + | chr3_1:73801510-73801529 | Msa0374360:CDS | 50.0% |
| GCGTTGTACATACCAAGCCA+TGG | - | chr3_1:73801577-73801596 | None:intergenic | 50.0% | |
| ACCAGATGAGCTGCTCTTTG+AGG | + | chr3_1:73801786-73801805 | Msa0374360:CDS | 50.0% | |
| ACCTCAAAGAGCAGCTCATC+TGG | - | chr3_1:73801790-73801809 | None:intergenic | 50.0% | |
| TTGGCGCAATGCATGCTTGA+AGG | + | chr3_1:73802332-73802351 | Msa0374360:CDS | 50.0% | |
| TGGCGCAATGCATGCTTGAA+GGG | + | chr3_1:73802333-73802352 | Msa0374360:CDS | 50.0% | |
| GCAATGCATGCTTGAAGGGT+TGG | + | chr3_1:73802337-73802356 | Msa0374360:CDS | 50.0% | |
| TTGGCAGGTAAGGTCAATGG+AGG | + | chr3_1:73802356-73802375 | Msa0374360:intron | 50.0% | |
| ! | ATGGCTCATGGCGGAAAATG+TGG | + | chr3_1:73802489-73802508 | Msa0374360:CDS | 50.0% |
| GGCGGAAAATGTGGCTCTTA+CGG | + | chr3_1:73802498-73802517 | Msa0374360:CDS | 50.0% | |
| AAATGTGGCTCTTACGGCCA+AGG | + | chr3_1:73802504-73802523 | Msa0374360:CDS | 50.0% | |
| TGCTCTTCCCTGCAGAGTAT+AGG | + | chr3_1:73803353-73803372 | Msa0374360:intron | 50.0% | |
| ! | ACACCTTCTGATGAAGGTGC+TGG | - | chr3_1:73803663-73803682 | None:intergenic | 50.0% |
| !! | GTGTGTGGTGTTGGTTGATC+CGG | + | chr3_1:73803703-73803722 | Msa0374360:intron | 50.0% |
| !! | GTGTTGGTTGATCCGGATAG+TGG | + | chr3_1:73803710-73803729 | Msa0374360:intron | 50.0% |
| ACAGACCTGCAGAATATGGG+GGG | - | chr3_1:73803994-73804013 | None:intergenic | 50.0% | |
| AAAACAGTAGGTCGCATGCC+TGG | - | chr3_1:73804406-73804425 | None:intergenic | 50.0% | |
| ! | GCATGCGACCTACTGTTTTG+AGG | + | chr3_1:73804407-73804426 | Msa0374360:CDS | 50.0% |
| CTCACTTGTCACTAGTGGTG+TGG | + | chr3_1:73805323-73805342 | Msa0374360:CDS | 50.0% | |
| ATGTGAGACTGCTGGCACAT+CGG | - | chr3_1:73805427-73805446 | None:intergenic | 50.0% | |
| TGCCAGCAGTCTCACATAAG+AGG | + | chr3_1:73805430-73805449 | Msa0374360:CDS | 50.0% | |
| GCCAGCAGTCTCACATAAGA+GGG | + | chr3_1:73805431-73805450 | Msa0374360:CDS | 50.0% | |
| CCAGCAGTCTCACATAAGAG+GGG | + | chr3_1:73805432-73805451 | Msa0374360:CDS | 50.0% | |
| AATGCTGCCCCTGAAATACC+TGG | + | chr3_1:73805786-73805805 | Msa0374360:exon | 50.0% | |
| TCACTCATGGCGTCAGGTTC+AGG | + | chr3_1:73801001-73801020 | Msa0374360:exon | 55.0% | |
| ! | GAAGAAGGTGCGGATCGAAG+TGG | - | chr3_1:73801047-73801066 | None:intergenic | 55.0% |
| GTTACAAGGAGGCCATGGCT+TGG | + | chr3_1:73801562-73801581 | Msa0374360:CDS | 55.0% | |
| ! | TGCATGCTTGAAGGGTTGGC+AGG | + | chr3_1:73802341-73802360 | Msa0374360:CDS | 55.0% |
| ! | GCTTGAAGGGTTGGCAGGTA+AGG | + | chr3_1:73802346-73802365 | Msa0374360:intron | 55.0% |
| ! | GGGTTGGCAGGTAAGGTCAA+TGG | + | chr3_1:73802353-73802372 | Msa0374360:intron | 55.0% |
| CGGCCAAGGTTGCGATTTGA+CGG | + | chr3_1:73802518-73802537 | Msa0374360:CDS | 55.0% | |
| TGCAACTCCAACCCGGATGT+AGG | - | chr3_1:73802867-73802886 | None:intergenic | 55.0% | |
| TCCACTCTGCAACTCCAACC+CGG | - | chr3_1:73802874-73802893 | None:intergenic | 55.0% | |
| !! | CTTCTGATGAAGGTGCTGGC+TGG | - | chr3_1:73803659-73803678 | None:intergenic | 55.0% |
| CAGCCAGCACCTTCATCAGA+AGG | + | chr3_1:73803657-73803676 | Msa0374360:intron | 55.0% | |
| GAAGCTGCTGTCCTGTATCC+AGG | + | chr3_1:73804385-73804404 | Msa0374360:CDS | 55.0% | |
| TAGGTCGCATGCCTGGATAC+AGG | - | chr3_1:73804399-73804418 | None:intergenic | 55.0% | |
| TGGAGTCGTTGAAGGATGGC+AGG | + | chr3_1:73805383-73805402 | Msa0374360:CDS | 55.0% | |
| TGTGAGACTGCTGGCACATC+GGG | - | chr3_1:73805426-73805445 | None:intergenic | 55.0% | |
| CCCCTCTTATGTGAGACTGC+TGG | - | chr3_1:73805435-73805454 | None:intergenic | 55.0% | |
| TTCAGGGGCAGCATTCAACC+AGG | - | chr3_1:73805781-73805800 | None:intergenic | 55.0% | |
| GTGCGGATCGAAGTGGTGAG+AGG | - | chr3_1:73801040-73801059 | None:intergenic | 60.0% | |
| ! | GTGAGACCTGTCGCGCCTTT+TGG | + | chr3_1:73801712-73801731 | Msa0374360:CDS | 60.0% |
| ! | GCACTTCCAAAAGGCGCGAC+AGG | - | chr3_1:73801721-73801740 | None:intergenic | 60.0% |
| ! | TCCGGGTTGGAGTTGCAGAG+TGG | + | chr3_1:73802870-73802889 | Msa0374360:CDS | 60.0% |
| GTGAGACTGCTGGCACATCG+GGG | - | chr3_1:73805425-73805444 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 73800806 | 73806129 | 73800806 | ID=Msa0374360;Name=Msa0374360 |
| chr3_1 | mRNA | 73800806 | 73806129 | 73800806 | ID=Msa0374360-mRNA-1;Parent=Msa0374360;Name=Msa0374360-mRNA-1;_AED=0.22;_eAED=0.22;_QI=201|1|1|1|1|1|11|343|329 |
| chr3_1 | exon | 73800806 | 73801022 | 73800806 | ID=Msa0374360-mRNA-1:exon:16834;Parent=Msa0374360-mRNA-1 |
| chr3_1 | exon | 73801497 | 73801583 | 73801497 | ID=Msa0374360-mRNA-1:exon:16835;Parent=Msa0374360-mRNA-1 |
| chr3_1 | exon | 73801695 | 73801807 | 73801695 | ID=Msa0374360-mRNA-1:exon:16836;Parent=Msa0374360-mRNA-1 |
| chr3_1 | exon | 73802246 | 73802362 | 73802246 | ID=Msa0374360-mRNA-1:exon:16837;Parent=Msa0374360-mRNA-1 |
| chr3_1 | exon | 73802443 | 73802539 | 73802443 | ID=Msa0374360-mRNA-1:exon:16838;Parent=Msa0374360-mRNA-1 |
| chr3_1 | exon | 73802843 | 73802916 | 73802843 | ID=Msa0374360-mRNA-1:exon:16839;Parent=Msa0374360-mRNA-1 |
| chr3_1 | exon | 73804008 | 73804061 | 73804008 | ID=Msa0374360-mRNA-1:exon:16840;Parent=Msa0374360-mRNA-1 |
| chr3_1 | exon | 73804148 | 73804249 | 73804148 | ID=Msa0374360-mRNA-1:exon:16841;Parent=Msa0374360-mRNA-1 |
| chr3_1 | exon | 73804382 | 73804440 | 73804382 | ID=Msa0374360-mRNA-1:exon:16842;Parent=Msa0374360-mRNA-1 |
| chr3_1 | exon | 73805278 | 73805488 | 73805278 | ID=Msa0374360-mRNA-1:exon:16843;Parent=Msa0374360-mRNA-1 |
| chr3_1 | exon | 73805727 | 73806129 | 73805727 | ID=Msa0374360-mRNA-1:exon:16844;Parent=Msa0374360-mRNA-1 |
| chr3_1 | five_prime_UTR | 73800806 | 73801006 | 73800806 | ID=Msa0374360-mRNA-1:five_prime_utr;Parent=Msa0374360-mRNA-1 |
| chr3_1 | CDS | 73801007 | 73801022 | 73801007 | ID=Msa0374360-mRNA-1:cds;Parent=Msa0374360-mRNA-1 |
| chr3_1 | CDS | 73801497 | 73801583 | 73801497 | ID=Msa0374360-mRNA-1:cds;Parent=Msa0374360-mRNA-1 |
| chr3_1 | CDS | 73801695 | 73801807 | 73801695 | ID=Msa0374360-mRNA-1:cds;Parent=Msa0374360-mRNA-1 |
| chr3_1 | CDS | 73802246 | 73802362 | 73802246 | ID=Msa0374360-mRNA-1:cds;Parent=Msa0374360-mRNA-1 |
| chr3_1 | CDS | 73802443 | 73802539 | 73802443 | ID=Msa0374360-mRNA-1:cds;Parent=Msa0374360-mRNA-1 |
| chr3_1 | CDS | 73802843 | 73802916 | 73802843 | ID=Msa0374360-mRNA-1:cds;Parent=Msa0374360-mRNA-1 |
| chr3_1 | CDS | 73804008 | 73804061 | 73804008 | ID=Msa0374360-mRNA-1:cds;Parent=Msa0374360-mRNA-1 |
| chr3_1 | CDS | 73804148 | 73804249 | 73804148 | ID=Msa0374360-mRNA-1:cds;Parent=Msa0374360-mRNA-1 |
| chr3_1 | CDS | 73804382 | 73804440 | 73804382 | ID=Msa0374360-mRNA-1:cds;Parent=Msa0374360-mRNA-1 |
| chr3_1 | CDS | 73805278 | 73805488 | 73805278 | ID=Msa0374360-mRNA-1:cds;Parent=Msa0374360-mRNA-1 |
| chr3_1 | CDS | 73805727 | 73805786 | 73805727 | ID=Msa0374360-mRNA-1:cds;Parent=Msa0374360-mRNA-1 |
| chr3_1 | three_prime_UTR | 73805787 | 73806129 | 73805787 | ID=Msa0374360-mRNA-1:three_prime_utr;Parent=Msa0374360-mRNA-1 |
| Gene Sequence |
| Protein sequence |
