AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1348500

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1348500 MtrunA17_Chr3g0139371 89.885 435 11 2 1 435 1 402 0.0 784
Msa1348500 MtrunA17_Chr4g0058241 56.236 441 140 8 10 431 17 423 3.26e-165 471
Msa1348500 MtrunA17_Chr3g0116701 56.081 444 143 9 4 431 12 419 1.90e-162 464
Msa1348500 MtrunA17_Chr3g0123491 55.629 453 142 7 2 431 4 420 2.68e-162 464
Msa1348500 MtrunA17_Chr8g0369241 32.044 362 179 10 107 430 148 480 2.94e-44 165
Msa1348500 MtrunA17_Chr6g0480541 32.938 337 191 8 101 434 899 1203 2.58e-41 157
Msa1348500 MtrunA17_Chr5g0407121 30.829 386 188 11 107 431 47 414 3.47e-41 152
Msa1348500 MtrunA17_Chr5g0437131 30.267 337 192 6 98 429 405 703 2.81e-39 150
Msa1348500 MtrunA17_Chr1g0210061 29.716 387 208 10 56 431 592 925 2.92e-39 150
Msa1348500 MtrunA17_Chr8g0370321 29.581 382 194 11 107 431 47 410 1.09e-38 145
Msa1348500 MtrunA17_Chr4g0027671 32.184 174 91 3 271 431 319 478 6.50e-23 101
Msa1348500 MtrunA17_Chr4g0027671 33.333 156 89 4 93 242 34 180 3.12e-20 93.2
Msa1348500 MtrunA17_Chr4g0051261 27.545 334 176 11 107 432 13 288 1.26e-22 97.4
Msa1348500 MtrunA17_Chr1g0179611 36.364 143 76 4 107 243 53 186 4.10e-22 99.0
Msa1348500 MtrunA17_Chr1g0179611 33.333 174 89 3 271 431 319 478 1.45e-20 94.0
Msa1348500 MtrunA17_Chr2g0320631 33.333 174 89 4 271 431 318 477 1.06e-21 97.4
Msa1348500 MtrunA17_Chr2g0320631 33.974 156 88 4 93 242 35 181 4.67e-21 95.5
Msa1348500 MtrunA17_Chr8g0339221 27.811 338 173 13 107 435 13 288 2.62e-21 95.9
Msa1348500 MtrunA17_Chr4g0057791 28.402 338 178 11 107 432 227 512 5.03e-21 95.5
Msa1348500 MtrunA17_Chr6g0480481 31.140 228 93 6 101 326 35 200 8.18e-21 90.1
Msa1348500 MtrunA17_Chr3g0141871 26.048 334 183 10 107 431 41 319 7.89e-20 90.5
Msa1348500 MtrunA17_Chr2g0293491 27.327 333 178 12 107 432 13 288 1.07e-19 89.0
Msa1348500 MtrunA17_Chr8g0369451 27.844 334 171 13 107 432 13 284 3.59e-19 89.4
Msa1348500 MtrunA17_Chr4g0038501 30.804 224 110 6 107 323 29 214 7.39e-19 89.7
Msa1348500 MtrunA17_Chr4g0002001 27.874 348 171 12 107 431 13 303 7.59e-19 87.0
Msa1348500 MtrunA17_Chr1g0187371 26.488 336 182 12 107 431 27 308 1.56e-18 85.9
Msa1348500 MtrunA17_Chr8g0348481 26.426 333 182 11 107 431 46 323 2.41e-18 86.3
Msa1348500 MtrunA17_Chr4g0065851 27.219 338 178 14 107 431 34 316 2.51e-18 87.4
Msa1348500 MtrunA17_Chr6g0478601 31.801 261 141 11 107 349 120 361 3.29e-18 87.0
Msa1348500 MtrunA17_Chr4g0038091 30.357 224 111 6 107 323 29 214 4.04e-18 87.4
Msa1348500 MtrunA17_Chr4g0030231 27.715 267 133 9 170 431 115 326 9.08e-18 84.7
Msa1348500 MtrunA17_Chr3g0130781 24.719 356 187 14 107 433 27 330 1.12e-17 85.1
Msa1348500 MtrunA17_Chr4g0045841 24.107 336 185 12 107 431 64 340 7.45e-17 82.0
Msa1348500 MtrunA17_Chr4g0030151 25.225 333 186 12 107 431 48 325 8.57e-17 81.6
Msa1348500 MtrunA17_Chr8g0358921 26.036 338 179 12 107 431 56 335 1.17e-16 80.9
Msa1348500 MtrunA17_Chr2g0287271 27.139 339 179 14 107 432 34 317 1.44e-16 82.0
Msa1348500 MtrunA17_Chr2g0284091 26.126 333 185 10 105 431 47 324 1.65e-16 80.9
Msa1348500 MtrunA17_Chr4g0018201 32.751 229 130 9 107 324 768 983 2.89e-16 81.6
Msa1348500 MtrunA17_Chr5g0428981 32.314 229 131 9 107 324 772 987 4.01e-16 81.3
Msa1348500 MtrunA17_Chr2g0277011 24.490 343 191 12 98 431 91 374 4.58e-16 79.7
Msa1348500 MtrunA17_Chr7g0248461 25.526 333 185 12 107 431 47 324 5.55e-16 79.3
Msa1348500 MtrunA17_Chr8g0392811 25.595 336 186 11 107 431 126 408 9.29e-16 79.7
Msa1348500 MtrunA17_Chr1g0205931 26.515 264 145 9 107 356 64 292 9.34e-16 79.7
Msa1348500 MtrunA17_Chr8g0350311 25.369 339 180 15 105 431 146 423 1.04e-15 79.0
Msa1348500 MtrunA17_Chr6g0483151 24.412 340 180 12 107 434 23 297 1.07e-15 78.6
Msa1348500 MtrunA17_Chr1g0170551 27.046 281 142 11 107 371 16 249 1.11e-15 79.7
Msa1348500 MtrunA17_Chr8g0378831 25.074 339 180 11 107 431 41 319 1.59e-15 77.8
Msa1348500 MtrunA17_Chr8g0377071 27.027 333 187 10 107 432 394 677 3.12e-15 78.2
Msa1348500 MtrunA17_Chr8g0359091 28.319 339 175 14 107 432 35 318 4.30e-15 77.4
Msa1348500 MtrunA17_Chr3g0122781 26.957 345 187 12 107 432 425 723 4.47e-15 77.8
Msa1348500 MtrunA17_Chr2g0320011 24.551 334 189 11 105 431 95 372 4.92e-15 76.6
Msa1348500 MtrunA17_Chr5g0443351 25.595 336 186 11 107 431 31 313 5.17e-15 77.0
Msa1348500 MtrunA17_Chr3g0102571 25.385 260 146 7 173 431 154 366 6.40e-15 76.3
Msa1348500 MtrunA17_Chr3g0096631 25.816 337 186 11 107 432 34 317 7.05e-15 76.6
Msa1348500 MtrunA17_Chr3g0099951 23.054 334 188 10 107 431 23 296 4.63e-14 73.6
Msa1348500 MtrunA17_Chr7g0272841 25.758 264 147 8 107 356 77 305 5.96e-14 73.9
Msa1348500 MtrunA17_Chr3g0093391 24.419 344 188 11 107 431 32 322 7.63e-14 73.6
Msa1348500 MtrunA17_Chr6g0482681 24.932 365 207 14 78 431 72 380 7.75e-14 73.6
Msa1348500 MtrunA17_Chr3g0093571 24.709 344 187 11 107 431 34 324 8.66e-14 73.2
Msa1348500 MtrunA17_Chr7g0246591 23.615 343 198 11 98 431 138 425 1.76e-13 72.0
Msa1348500 MtrunA17_Chr2g0314321 26.331 357 176 13 107 432 34 334 1.78e-13 72.4
Msa1348500 MtrunA17_Chr7g0245031 27.876 226 122 7 107 328 157 345 2.37e-13 71.6
Msa1348500 MtrunA17_Chr1g0190131 26.061 330 154 10 107 430 18 263 2.43e-13 70.1
Msa1348500 MtrunA17_Chr1g0167351 25.498 251 147 6 107 332 119 354 1.14e-12 69.7
Msa1348500 MtrunA17_Chr8g0345801 26.471 238 126 7 107 335 24 221 1.16e-12 67.8
Msa1348500 MtrunA17_Chr1g0176421 25.749 334 159 13 107 433 170 421 1.28e-12 69.7
Msa1348500 MtrunA17_Chr4g0061141 24.638 345 173 12 107 432 114 390 2.68e-12 68.9
Msa1348500 MtrunA17_Chr4g0059751 27.626 257 128 11 107 346 98 313 2.83e-12 68.2
Msa1348500 MtrunA17_Chr1g0167311 25.896 251 146 7 107 332 124 359 3.22e-12 68.2
Msa1348500 MtrunA17_Chr1g0201571 26.829 287 148 13 75 345 104 344 3.72e-12 68.2
Msa1348500 MtrunA17_Chr1g0203881 25.846 325 160 10 107 428 50 296 4.84e-12 67.8
Msa1348500 MtrunA17_Chr2g0286421 25.872 344 168 12 107 431 111 386 5.07e-12 67.8
Msa1348500 MtrunA17_Chr4g0030241 30.612 147 73 5 220 361 15 137 7.45e-12 63.9
Msa1348500 MtrunA17_Chr7g0258051 24.806 258 148 8 98 348 18 236 9.31e-12 67.0
Msa1348500 MtrunA17_Chr6g0453711 25.000 336 181 13 107 431 119 394 1.02e-11 67.0
Msa1348500 MtrunA17_Chr5g0396361 25.373 335 181 13 107 431 149 424 2.46e-11 65.9
Msa1348500 MtrunA17_Chr4g0066691 25.291 344 170 12 107 431 113 388 5.88e-11 64.3
Msa1348500 MtrunA17_Chr7g0218071 25.000 344 172 11 107 431 129 405 6.10e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1348500 AT4G32660.1 65.888 428 106 4 6 432 9 397 0.0 567
Msa1348500 AT4G32660.3 65.888 428 106 4 6 432 1 389 0.0 567
Msa1348500 AT4G32660.2 66.321 386 90 4 6 390 9 355 1.61e-179 505
Msa1348500 AT3G53570.1 58.520 446 128 8 9 431 32 443 6.15e-175 498
Msa1348500 AT3G53570.4 58.520 446 128 8 9 431 32 443 6.15e-175 498
Msa1348500 AT3G53570.2 58.520 446 128 8 9 431 32 443 6.15e-175 498
Msa1348500 AT3G53570.3 58.520 446 128 8 9 431 18 429 1.02e-174 497
Msa1348500 AT3G53570.5 58.520 446 128 8 9 431 18 429 1.02e-174 497
Msa1348500 AT4G24740.1 53.691 447 142 8 10 431 17 423 2.96e-160 459
Msa1348500 AT4G24740.7 58.312 391 126 6 43 431 30 385 4.08e-160 457
Msa1348500 AT4G32660.4 73.129 294 69 2 140 432 1 285 1.89e-157 446
Msa1348500 AT4G24740.6 63.720 328 105 5 107 431 4 320 7.89e-150 429
Msa1348500 AT4G24740.9 63.720 328 105 5 107 431 4 320 7.89e-150 429
Msa1348500 AT4G24740.2 63.720 328 105 5 107 431 4 320 7.89e-150 429
Msa1348500 AT4G24740.3 54.201 369 106 6 10 354 17 346 2.34e-132 385
Msa1348500 AT4G24740.5 67.600 250 69 3 107 354 4 243 1.91e-121 353
Msa1348500 AT4G24740.4 52.047 342 100 7 6 323 14 315 1.27e-111 331
Msa1348500 AT4G24740.10 64.623 212 70 4 223 431 8 217 1.28e-92 279
Msa1348500 AT4G24740.8 64.623 212 70 4 223 431 8 217 1.28e-92 279
Msa1348500 AT5G35980.2 31.405 363 180 11 107 430 131 463 9.51e-43 160
Msa1348500 AT5G35980.3 31.405 363 180 11 107 430 96 428 2.60e-42 160
Msa1348500 AT5G35980.1 31.405 363 180 11 107 430 131 463 3.06e-42 160
Msa1348500 AT3G53640.1 30.357 392 200 11 56 431 305 639 5.38e-41 154
Msa1348500 AT1G13350.3 30.435 391 199 12 56 430 497 830 8.51e-40 152
Msa1348500 AT1G73460.2 32.344 337 193 8 101 434 859 1163 8.64e-40 152
Msa1348500 AT1G73460.1 32.344 337 193 8 101 434 859 1163 8.64e-40 152
Msa1348500 AT1G73450.1 32.344 337 193 8 101 434 842 1146 8.91e-40 152
Msa1348500 AT1G13350.1 30.357 392 200 12 56 431 424 758 1.01e-39 152
Msa1348500 AT1G13350.2 30.357 392 200 12 56 431 451 785 1.27e-39 152
Msa1348500 AT3G25840.2 29.847 392 201 11 56 431 337 670 2.31e-39 150
Msa1348500 AT3G17750.1 32.249 338 194 8 98 434 829 1132 6.36e-39 150
Msa1348500 AT3G25840.1 29.847 392 201 11 56 431 599 932 2.91e-38 148
Msa1348500 AT4G35500.1 28.463 397 193 12 107 435 47 420 3.29e-38 144
Msa1348500 AT2G40120.1 30.861 337 190 8 98 429 263 561 1.11e-37 144
Msa1348500 AT4G35500.2 25.990 404 195 13 107 435 47 421 1.85e-28 117
Msa1348500 AT3G44850.1 38.462 143 73 4 107 243 54 187 7.90e-23 101
Msa1348500 AT3G44850.1 35.057 174 86 5 271 431 322 481 1.39e-22 100
Msa1348500 AT2G38620.2 28.406 345 173 15 107 431 13 303 7.93e-22 95.9
Msa1348500 AT3G53030.1 36.364 143 76 4 107 243 51 184 9.86e-22 98.2
Msa1348500 AT3G53030.1 33.714 175 89 3 271 432 307 467 3.77e-21 96.3
Msa1348500 AT5G22840.1 34.483 174 87 5 271 431 311 470 4.88e-21 95.9
Msa1348500 AT5G22840.1 36.364 143 76 4 107 243 54 187 1.59e-20 94.4
Msa1348500 AT1G76540.1 25.294 340 181 12 107 431 23 304 1.55e-20 92.0
Msa1348500 AT3G48750.1 25.152 330 189 9 107 432 13 288 7.19e-20 90.1
Msa1348500 AT3G54180.1 27.697 343 176 13 107 431 13 301 1.17e-19 89.7
Msa1348500 AT3G13530.1 30.804 224 110 6 107 323 29 214 1.30e-19 92.4
Msa1348500 AT2G17530.1 32.022 178 94 4 271 435 256 419 1.52e-19 90.9
Msa1348500 AT2G17530.1 34.965 143 78 4 107 243 47 180 1.16e-16 82.0
Msa1348500 AT2G17530.3 32.022 178 94 4 271 435 256 419 1.52e-19 90.9
Msa1348500 AT2G17530.3 34.965 143 78 4 107 243 47 180 1.16e-16 82.0
Msa1348500 AT4G13020.7 25.970 335 182 10 107 435 13 287 3.83e-19 89.0
Msa1348500 AT4G19110.2 27.300 337 169 13 107 432 13 284 3.89e-19 89.7
Msa1348500 AT4G19110.1 27.300 337 169 13 107 432 13 284 4.65e-19 89.7
Msa1348500 AT4G13020.6 25.970 335 182 10 107 435 13 287 4.83e-19 89.0
Msa1348500 AT4G13020.4 25.970 335 182 10 107 435 13 287 4.92e-19 89.0
Msa1348500 AT4G13020.1 25.970 335 182 10 107 435 13 287 5.13e-19 89.4
Msa1348500 AT4G11330.1 26.506 332 183 13 107 431 52 329 6.47e-19 88.6
Msa1348500 AT4G13020.2 25.970 335 182 10 107 435 21 295 6.64e-19 89.0
Msa1348500 AT4G13020.3 25.970 335 182 10 107 435 21 295 6.68e-19 89.0
Msa1348500 AT3G17850.1 31.950 241 137 8 107 336 891 1115 7.85e-19 90.1
Msa1348500 AT3G07980.1 31.250 224 109 7 107 323 29 214 9.71e-19 89.7
Msa1348500 AT3G07980.2 31.250 224 109 7 107 323 29 214 1.16e-18 89.4
Msa1348500 AT2G38620.4 30.579 242 111 9 194 431 53 241 1.43e-18 85.1
Msa1348500 AT1G20930.1 26.239 343 174 12 107 431 25 306 1.60e-18 86.3
Msa1348500 AT1G10210.2 25.826 333 185 12 107 431 41 319 2.10e-18 86.7
Msa1348500 AT1G10210.3 25.826 333 185 12 107 431 41 319 2.10e-18 86.7
Msa1348500 AT1G10210.1 25.826 333 185 12 107 431 41 319 2.10e-18 86.7
Msa1348500 AT5G63370.2 25.893 336 190 10 107 431 172 459 2.41e-18 87.4
Msa1348500 AT5G63370.3 25.893 336 190 10 107 431 172 459 2.41e-18 87.4
Msa1348500 AT1G01560.2 26.471 340 173 13 107 431 49 326 2.63e-18 86.7
Msa1348500 AT1G59580.2 26.506 332 184 11 107 431 41 319 3.02e-18 86.3
Msa1348500 AT1G59580.1 26.506 332 184 11 107 431 41 319 3.02e-18 86.3
Msa1348500 AT4G13020.8 26.254 339 185 11 107 435 13 296 3.75e-18 86.3
Msa1348500 AT4G13020.5 26.254 339 185 11 107 435 13 296 4.15e-18 86.7
Msa1348500 AT5G63370.7 26.190 336 189 11 107 431 306 593 4.83e-18 87.0
Msa1348500 AT5G63370.8 26.190 336 189 11 107 431 306 593 4.83e-18 87.0
Msa1348500 AT5G63370.4 26.190 336 189 11 107 431 306 593 4.83e-18 87.0
Msa1348500 AT5G63370.6 26.190 336 189 11 107 431 306 593 4.83e-18 87.0
Msa1348500 AT5G63370.1 26.190 336 189 11 107 431 306 593 4.83e-18 87.0
Msa1348500 AT4G01370.1 26.126 333 183 12 107 431 52 329 5.68e-18 85.5
Msa1348500 AT5G45430.1 26.706 337 171 13 107 432 13 284 2.40e-17 84.7
Msa1348500 AT5G45430.2 26.706 337 171 13 107 432 13 284 2.68e-17 84.3
Msa1348500 AT2G17530.2 34.965 143 78 4 107 243 47 180 3.91e-17 82.8
Msa1348500 AT2G17530.2 41.667 84 43 1 271 348 256 339 2.97e-13 71.2
Msa1348500 AT1G57870.3 25.656 343 187 12 98 431 83 366 8.69e-17 82.4
Msa1348500 AT1G57870.1 24.581 358 172 11 98 431 83 366 9.57e-17 82.4
Msa1348500 AT1G57870.4 24.581 358 172 11 98 431 83 366 9.57e-17 82.4
Msa1348500 AT1G57870.2 24.581 358 172 11 98 431 83 366 9.57e-17 82.4
Msa1348500 AT5G63610.1 30.252 238 115 9 212 433 133 335 1.76e-16 81.6
Msa1348500 AT5G19010.1 27.697 343 172 15 107 432 34 317 3.21e-16 81.3
Msa1348500 AT3G14720.1 27.628 333 185 12 107 432 34 317 7.04e-16 80.5
Msa1348500 AT1G01560.3 25.749 334 167 14 107 423 49 318 9.89e-16 78.6
Msa1348500 AT1G67580.1 25.150 334 192 9 107 432 415 698 1.02e-15 80.1
Msa1348500 AT1G67580.2 25.150 334 192 9 107 432 415 698 1.02e-15 80.1
Msa1348500 AT4G36450.1 25.076 331 187 10 107 431 41 316 1.09e-15 78.6
Msa1348500 AT1G09840.3 24.302 358 173 11 98 431 84 367 1.28e-15 79.0
Msa1348500 AT1G09840.7 24.302 358 173 11 98 431 84 367 1.28e-15 79.0
Msa1348500 AT1G09840.10 24.302 358 173 11 98 431 84 367 1.28e-15 79.0
Msa1348500 AT1G09840.6 24.302 358 173 11 98 431 84 367 1.28e-15 79.0
Msa1348500 AT1G09840.4 24.302 358 173 11 98 431 84 367 1.28e-15 79.0
Msa1348500 AT1G09840.1 24.302 358 173 11 98 431 84 367 1.28e-15 79.0
Msa1348500 AT1G09840.9 24.302 358 173 11 98 431 84 367 1.28e-15 79.0
Msa1348500 AT1G09840.5 24.302 358 173 11 98 431 84 367 1.28e-15 79.0
Msa1348500 AT1G09840.8 24.302 358 173 11 98 431 84 367 1.28e-15 79.0
Msa1348500 AT1G09840.2 24.302 358 173 11 98 431 84 367 1.28e-15 79.0
Msa1348500 AT2G18170.1 25.000 332 189 10 107 431 41 319 1.47e-15 78.2
Msa1348500 AT1G73670.1 25.661 378 204 13 69 431 66 381 1.92e-15 79.0
Msa1348500 AT3G45640.1 24.107 336 186 11 107 431 47 324 2.04e-15 77.8
Msa1348500 AT1G07880.2 24.925 333 187 11 107 431 42 319 2.31e-15 77.8
Msa1348500 AT3G14720.2 27.628 333 185 12 107 432 34 317 2.89e-15 77.8
Msa1348500 AT3G14720.3 27.628 333 185 12 107 432 34 317 2.89e-15 77.8
Msa1348500 AT1G48490.4 28.788 264 156 8 107 356 838 1083 3.36e-15 78.6
Msa1348500 AT1G48490.3 28.788 264 156 8 107 356 837 1082 3.41e-15 78.6
Msa1348500 AT1G48490.2 28.788 264 156 8 107 356 837 1082 3.41e-15 78.6
Msa1348500 AT1G48490.1 28.788 264 156 8 107 356 837 1082 3.41e-15 78.6
Msa1348500 AT4G18710.1 25.075 335 186 11 105 431 47 324 4.45e-15 77.0
Msa1348500 AT2G43790.1 23.442 337 188 12 107 432 72 349 4.86e-15 77.0
Msa1348500 AT4G19110.3 29.075 227 106 8 213 432 50 228 6.18e-15 76.6
Msa1348500 AT2G30980.1 24.279 416 235 16 26 431 11 356 8.99e-15 76.3
Msa1348500 AT1G50240.3 26.429 280 145 11 107 371 15 248 1.24e-14 77.0
Msa1348500 AT1G50240.2 26.429 280 145 11 107 371 15 248 1.24e-14 77.0
Msa1348500 AT3G18040.1 27.273 308 173 10 75 371 5 272 1.30e-14 76.3
Msa1348500 AT3G18040.4 27.273 308 173 10 75 371 114 381 1.40e-14 76.3
Msa1348500 AT3G18040.3 27.273 308 173 10 75 371 114 381 2.53e-14 75.5
Msa1348500 AT3G18040.5 27.124 306 172 10 77 371 2 267 2.55e-14 75.1
Msa1348500 AT2G42880.1 26.686 341 178 12 107 432 34 317 3.79e-14 75.1
Msa1348500 AT1G73690.1 25.000 336 177 14 107 431 20 291 3.91e-14 74.3
Msa1348500 AT2G42880.2 26.686 341 178 12 107 432 34 317 4.31e-14 74.3
Msa1348500 AT5G63370.5 27.888 251 132 10 107 345 306 519 5.06e-14 74.3
Msa1348500 AT5G63370.10 27.888 251 132 10 107 345 306 519 5.06e-14 74.3
Msa1348500 AT1G06390.2 24.478 335 188 12 105 431 77 354 6.48e-14 73.6
Msa1348500 AT1G06390.1 24.478 335 188 12 105 431 77 354 6.48e-14 73.6
Msa1348500 AT1G09000.1 27.391 230 122 7 107 326 78 272 6.84e-14 74.3
Msa1348500 AT5G63370.9 26.800 250 136 8 107 345 172 385 8.48e-14 73.2
Msa1348500 AT1G09000.2 27.391 230 122 7 107 326 78 272 8.96e-14 73.9
Msa1348500 AT1G01560.4 28.226 248 127 10 107 343 49 256 1.15e-13 71.6
Msa1348500 AT1G01560.1 28.226 248 127 10 107 343 49 256 1.15e-13 71.6
Msa1348500 AT1G53510.1 25.519 337 187 11 107 432 34 317 1.33e-13 73.2
Msa1348500 AT2G01450.3 25.220 341 198 12 99 432 18 308 1.85e-13 72.4
Msa1348500 AT2G01450.1 25.220 341 198 12 99 432 18 308 1.85e-13 72.4
Msa1348500 AT2G01450.2 25.220 341 198 12 99 432 18 308 1.85e-13 72.4
Msa1348500 AT2G01450.4 25.220 341 198 12 99 432 18 308 1.85e-13 72.4
Msa1348500 AT3G08730.1 27.632 228 120 8 107 328 143 331 2.32e-13 72.0
Msa1348500 AT3G08730.2 27.632 228 120 8 107 328 143 331 2.32e-13 72.0
Msa1348500 AT1G18150.3 27.609 297 164 11 69 354 80 336 2.35e-13 72.4
Msa1348500 AT1G18150.2 27.609 297 164 11 69 354 80 336 2.35e-13 72.4
Msa1348500 AT1G18150.1 27.609 297 164 11 69 354 80 336 2.35e-13 72.4
Msa1348500 AT3G08720.1 27.876 226 122 7 107 328 149 337 3.22e-13 71.6
Msa1348500 AT3G08720.3 27.876 226 122 7 107 328 149 337 3.22e-13 71.6
Msa1348500 AT3G08720.4 27.876 226 122 7 107 328 149 337 3.22e-13 71.6
Msa1348500 AT3G08720.2 27.876 226 122 7 107 328 149 337 3.22e-13 71.6
Msa1348500 AT1G08650.1 24.085 328 170 8 107 432 24 274 3.33e-13 70.1
Msa1348500 AT2G38620.3 28.295 258 132 12 107 344 13 237 6.37e-13 68.9
Msa1348500 AT2G38620.1 28.295 258 132 12 107 344 13 237 6.37e-13 68.9
Msa1348500 AT4G18710.2 24.803 254 149 8 105 351 41 259 6.81e-13 69.3
Msa1348500 AT3G04530.1 24.576 236 134 8 107 334 20 219 1.22e-12 68.6
Msa1348500 AT1G54960.1 25.150 334 159 10 107 430 77 329 1.36e-12 70.1
Msa1348500 AT1G54960.2 25.150 334 159 10 107 430 77 329 1.36e-12 70.1
Msa1348500 AT1G08650.2 25.909 220 129 4 107 324 24 211 1.94e-12 67.8
Msa1348500 AT4G04700.1 25.877 228 131 6 107 328 37 232 2.40e-12 68.9
Msa1348500 AT1G09840.11 27.064 218 108 7 220 431 68 240 3.44e-12 67.4
Msa1348500 AT4G10010.2 26.377 345 169 14 107 433 165 442 7.43e-12 67.8
Msa1348500 AT5G04510.2 24.783 230 141 8 105 329 51 253 8.66e-12 67.0
Msa1348500 AT5G04510.1 24.783 230 141 8 105 329 51 253 9.23e-12 67.4
Msa1348500 AT5G04510.3 24.348 230 142 8 105 329 51 253 1.30e-11 65.9
Msa1348500 AT5G64960.1 25.648 347 180 13 107 431 35 325 1.68e-11 66.6
Msa1348500 AT3G18040.2 28.846 208 105 7 172 371 12 184 2.18e-11 65.9
Msa1348500 AT5G23580.1 24.523 367 177 15 72 430 5 279 2.74e-11 65.9
Msa1348500 AT5G44290.2 25.446 224 116 7 216 433 245 423 4.50e-11 65.5
Msa1348500 AT5G44290.5 25.446 224 116 7 216 433 245 423 4.50e-11 65.5
Msa1348500 AT5G44290.4 25.446 224 116 7 216 433 245 423 4.50e-11 65.5
Msa1348500 AT5G44290.1 25.446 224 116 7 216 433 245 423 4.50e-11 65.5
Msa1348500 AT5G44290.3 25.446 224 116 7 216 433 245 423 4.50e-11 65.5
Msa1348500 AT5G44290.6 25.561 223 115 7 216 432 245 422 4.54e-11 65.5
Msa1348500 AT5G50860.2 24.709 344 172 12 107 431 123 398 5.76e-11 64.7
Msa1348500 AT5G44290.7 25.561 223 115 7 216 432 245 422 5.82e-11 64.7
Msa1348500 AT1G18670.2 25.797 345 170 13 107 431 140 418 7.61e-11 64.7
Msa1348500 AT5G50860.1 24.709 344 172 12 107 431 123 398 7.66e-11 64.7

Find 128 sgRNAs with CRISPR-Local

Find 326 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAGATACCATTTACATTAA+TGG 0.152187 tig0010469:+30524 None:intergenic
GTGGATCTTGTTCGTGAATT+TGG 0.181033 tig0010469:-28456 Msa1348500:CDS
ACTCTATTGAACATAATTAT+TGG 0.190340 tig0010469:-26038 Msa1348500:three_prime_UTR
GTTTCAGACTCATGAAAATT+TGG 0.209964 tig0010469:-26837 Msa1348500:CDS
GCGATTAAGCTGATTGATTT+TGG 0.243544 tig0010469:-28007 Msa1348500:CDS
ACCAACCACTGCCAAATTTC+TGG 0.248937 tig0010469:+30336 None:intergenic
TGAATTTGGACGACAGCTTT+TGG 0.258689 tig0010469:-28442 Msa1348500:CDS
AGATAAAATTCTCAGCAAAA+TGG 0.261730 tig0010469:-29378 Msa1348500:intron
AATTCAACCATTAATGTAAA+TGG 0.274823 tig0010469:-30531 Msa1348500:exon
AGAATAAACCGTTGGGAGTT+AGG 0.277518 tig0010469:+30661 None:intergenic
TGTCAGATGAAACACAATTT+AGG 0.278233 tig0010469:-28048 Msa1348500:CDS
GGCAATGATGGAGAGAGTTT+TGG 0.280611 tig0010469:-26807 Msa1348500:CDS
TCACGATCGTCGTCTCTTCT+TGG 0.281498 tig0010469:+30280 None:intergenic
CTCCCTTGAAACAGCTCCTT+CGG 0.283662 tig0010469:+26523 None:intergenic
AGGCACCTTCGGTCGAGTTT+TGG 0.286156 tig0010469:-29266 Msa1348500:CDS
TCCTGAATTGGTTCGATTAC+CGG 0.290840 tig0010469:-28981 Msa1348500:CDS
TCCGGTAATCGAACCAATTC+AGG 0.307110 tig0010469:+28980 None:intergenic
TCATTAACTGATTTGTTGTA+TGG 0.314065 tig0010469:-26318 Msa1348500:CDS
CTCTTGATCATCCTTTCTTT+AGG 0.318192 tig0010469:-26251 Msa1348500:CDS
AGAGCCCCTGAGGTTATCTT+AGG 0.322517 tig0010469:-27929 Msa1348500:intron
GCTTCAGGTCGGTGTGGATT+AGG 0.330715 tig0010469:+28217 None:intergenic
TAACTCCCAACGGTTTATTC+TGG 0.343918 tig0010469:-30659 Msa1348500:five_prime_UTR
GAAGAAGCTTGGTGATCTTA+AGG 0.349004 tig0010469:-26486 Msa1348500:intron
CGCCGAGATTAAAGACATAA+TGG 0.351983 tig0010469:+30254 None:intergenic
CTCTGGTAAGCAAGGCCTAC+TGG 0.358152 tig0010469:-25892 Msa1348500:three_prime_UTR
GGGACCTCTACCAGAGCATA+TGG 0.387839 tig0010469:-26786 Msa1348500:CDS
GTAAATGGTATCTAATTTCA+TGG 0.390979 tig0010469:-30516 Msa1348500:exon
TTACATACCTTTGGAATTGA+AGG 0.396668 tig0010469:+30434 None:intergenic
TTACAATGCATATGTGATTC+CGG 0.403247 tig0010469:+28962 None:intergenic
GAATAAACCGTTGGGAGTTA+GGG 0.422514 tig0010469:+30662 None:intergenic
AATGCCTTGTGTTATTTGAA+TGG 0.424169 tig0010469:-26209 Msa1348500:three_prime_UTR
TTTGGAGCACCTGGCAATGA+TGG 0.425144 tig0010469:-26819 Msa1348500:CDS
TAAGTTGGAATCCTAAAGAA+AGG 0.425691 tig0010469:+26240 None:intergenic
TCCCTTGAAACAGCTCCTTC+GGG 0.428173 tig0010469:+26524 None:intergenic
GCTAGTGCTGTAGGCACCTT+CGG 0.428753 tig0010469:-29277 Msa1348500:CDS
CCAACCACTGCCAAATTTCT+GGG 0.430843 tig0010469:+30337 None:intergenic
CACAATATCTCGCAGGGGTA+CGG 0.431103 tig0010469:-26582 Msa1348500:intron
TGAACATAATTATTGGATAG+AGG 0.434262 tig0010469:-26031 Msa1348500:three_prime_UTR
GGAATCCCGTATCTTGTCTC+TGG 0.448674 tig0010469:-30610 Msa1348500:five_prime_UTR
GGTATCTAATTTCATGGAAA+GGG 0.451585 tig0010469:-30510 Msa1348500:CDS
GATAAAATTCTCAGCAAAAT+GGG 0.454575 tig0010469:-29377 Msa1348500:intron
GGAAACGACCTCGTCTCGCT+TGG 0.458789 tig0010469:-30478 Msa1348500:CDS
GAAACGACCTCGTCTCGCTT+GGG 0.459412 tig0010469:-30477 Msa1348500:CDS
TATCAGGTCTTTGAGAAGCT+TGG 0.464813 tig0010469:-28528 Msa1348500:intron
CTTGATCGCTACATAATCTC+TGG 0.464927 tig0010469:+29225 None:intergenic
TCGTTACCTAAGATAACCTC+AGG 0.467009 tig0010469:+27923 None:intergenic
GGTCATCTCCATGTGATTTG+TGG 0.473282 tig0010469:-26989 Msa1348500:CDS
TTGGCGAGCAGTAATGCGTT+TGG 0.487197 tig0010469:+26275 None:intergenic
ACTGGGACATCAATATTTGA+AGG 0.489134 tig0010469:-25874 Msa1348500:three_prime_UTR
GGCCCGAAGGAGCTGTTTCA+AGG 0.489761 tig0010469:-26526 Msa1348500:CDS
TGTAAAGCTTCCTAGTTGTA+AGG 0.498491 tig0010469:-28163 Msa1348500:intron
CGAACAAGATCCACAGGGAA+TGG 0.498629 tig0010469:+28465 None:intergenic
GGCCATTATGTCTTTAATCT+CGG 0.499456 tig0010469:-30256 Msa1348500:CDS
CAGAGATTATGTAGCGATCA+AGG 0.502779 tig0010469:-29224 Msa1348500:CDS
TTTAGAAAATCAAATAAACT+TGG 0.502789 tig0010469:+28504 None:intergenic
ACCTTTGGAATTGAAGGAGG+TGG 0.504072 tig0010469:+30440 None:intergenic
GATCTTTGAACCATATGCTC+TGG 0.504088 tig0010469:+26776 None:intergenic
AATAATTATGTTCAATAGAG+TGG 0.504744 tig0010469:+26040 None:intergenic
TGGTATCTAATTTCATGGAA+AGG 0.505049 tig0010469:-30511 Msa1348500:CDS
CCATGTGATTTGTGGAGTGT+TGG 0.505435 tig0010469:-26981 Msa1348500:CDS
CAGCATGTTGCTAGTGCTGT+AGG 0.508712 tig0010469:-29286 Msa1348500:CDS
AAACTCTCTCCATCATTGCC+AGG 0.512831 tig0010469:+26810 None:intergenic
CCCAGAAATTTGGCAGTGGT+TGG 0.517994 tig0010469:-30337 Msa1348500:CDS
GGATTTATCATTTATTGCAG+TGG 0.518698 tig0010469:-26151 Msa1348500:three_prime_UTR
CATTGCAATGCAAATACAGT+TGG 0.521160 tig0010469:+26082 None:intergenic
CGATCGTCGTCTCTTCTTGG+AGG 0.522170 tig0010469:+30283 None:intergenic
TCTGGTAAGCAAGGCCTACT+GGG 0.526357 tig0010469:-25891 Msa1348500:three_prime_UTR
TCATGAAAATTTGGAGCACC+TGG 0.527435 tig0010469:-26828 Msa1348500:CDS
GAATTATGTTGTACTCAAGA+AGG 0.528671 tig0010469:-26009 Msa1348500:three_prime_UTR
GAACAAGATCCACAGGGAAT+GGG 0.532174 tig0010469:+28466 None:intergenic
AGAAAGGATGATCAAGAGCT+TGG 0.535458 tig0010469:+26256 None:intergenic
TGGAATCTGTAGCATGTCTG+TGG 0.543898 tig0010469:-28422 Msa1348500:CDS
AAAATGACATTCCAGGTCTA+GGG 0.544013 tig0010469:-27013 Msa1348500:intron
TTGTAGAAACAATGGAGCTA+TGG 0.547337 tig0010469:+27960 None:intergenic
CGAGCAGTAATGCGTTTGGA+TGG 0.548284 tig0010469:+26279 None:intergenic
GCTGTGTACAGATCCTGAAT+TGG 0.549041 tig0010469:-28993 Msa1348500:CDS
AGCTTAATCGCACTAGACTT+AGG 0.556964 tig0010469:+28019 None:intergenic
GTAATTCCAGAGACAAGATA+CGG 0.557194 tig0010469:+30604 None:intergenic
GCAAAATGGGTGAAGGTTAG+CGG 0.558808 tig0010469:-29364 Msa1348500:CDS
ATACAACAAATCAGTTAATG+AGG 0.558835 tig0010469:+26320 None:intergenic
CAACTGTATTTGCATTGCAA+TGG 0.562108 tig0010469:-26081 Msa1348500:three_prime_UTR
TGAACCATATGCTCTGGTAG+AGG 0.562280 tig0010469:+26782 None:intergenic
ATAATGCCTTGTAGAAACAA+TGG 0.567287 tig0010469:+27952 None:intergenic
ATAAATGCAGTGAAGAAGCT+TGG 0.570066 tig0010469:-26497 Msa1348500:CDS
CATACCTTTGGAATTGAAGG+AGG 0.570410 tig0010469:+30437 None:intergenic
AATTCACGAACAAGATCCAC+AGG 0.570749 tig0010469:+28459 None:intergenic
GAGAACCAGAATAAACCGTT+GGG 0.571649 tig0010469:+30654 None:intergenic
ATAGCTCCATTGTTTCTACA+AGG 0.573657 tig0010469:-27958 Msa1348500:CDS
TCATGGAAAGGGAACGAACT+CGG 0.583235 tig0010469:-30499 Msa1348500:CDS
CATTCTCATTGAGTTATGCA+CGG 0.584438 tig0010469:-26955 Msa1348500:intron
CACGTCATGTTGAGTCGTCA+AGG 0.590275 tig0010469:-26344 Msa1348500:CDS
CTGTGTCGTCTGTGTAAGAA+CGG 0.591211 tig0010469:+30632 None:intergenic
GGTACCCAGAAATTTGGCAG+TGG 0.594065 tig0010469:-30341 Msa1348500:CDS
TCCACCTCCTTCAATTCCAA+AGG 0.594074 tig0010469:-30441 Msa1348500:intron
GCCCGAAGGAGCTGTTTCAA+GGG 0.594720 tig0010469:-26525 Msa1348500:CDS
TCAAATATTGATGTCCCAGT+AGG 0.595403 tig0010469:+25877 None:intergenic
AGTTGTGGCGAATATGAAGA+TGG 0.597357 tig0010469:+30576 None:intergenic
AGAGGGCACTCTGGTAAGCA+AGG 0.599176 tig0010469:-25900 Msa1348500:three_prime_UTR
GGAGAACCAGAATAAACCGT+TGG 0.599407 tig0010469:+30653 None:intergenic
ATATCATTCAGAGGGCACTC+TGG 0.602779 tig0010469:-25909 Msa1348500:three_prime_UTR
ATTCTCAGCAAAATGGGTGA+AGG 0.606392 tig0010469:-29371 Msa1348500:intron
AATTGAACCCTAACTCCCAA+CGG 0.606887 tig0010469:-30669 Msa1348500:five_prime_UTR
ATACCAAGTACCTTACAACT+AGG 0.608609 tig0010469:+28153 None:intergenic
TTGGCAGTGGTTGGTGACGG+TGG 0.610790 tig0010469:-30328 Msa1348500:CDS
GTACTCAAGAAGGCTTGAGA+AGG 0.612803 tig0010469:-25999 Msa1348500:three_prime_UTR
CCAACACTCCACAAATCACA+TGG 0.613754 tig0010469:+26981 None:intergenic
TTTCTGGCTTCAGGTCGGTG+TGG 0.618594 tig0010469:+28211 None:intergenic
AATTTGGCAGTGGTTGGTGA+CGG 0.628481 tig0010469:-30331 Msa1348500:CDS
CGTCTTGTGAAGAGTGATGT+GGG 0.632369 tig0010469:-29142 Msa1348500:CDS
CGTTACCTAAGATAACCTCA+GGG 0.633079 tig0010469:+27924 None:intergenic
ACATGATGAATAAACGCTTG+AGG 0.635050 tig0010469:+28388 None:intergenic
AGAAGAGACGACGATCGTGA+TGG 0.636898 tig0010469:-30277 Msa1348500:CDS
TAATTCCAGAGACAAGATAC+GGG 0.637955 tig0010469:+30605 None:intergenic
AGCGTGGATCACGACTAAGA+TGG 0.638785 tig0010469:-26547 Msa1348500:CDS
ACATTCCAAAACTCGACCGA+AGG 0.639593 tig0010469:+29261 None:intergenic
CGTTCTTACACAGACGACAC+AGG 0.644964 tig0010469:-30631 Msa1348500:five_prime_UTR
GCTGCATCCCAAGCGAGACG+AGG 0.645412 tig0010469:+30470 None:intergenic
ATGACATTCCAGGTCTAGGG+TGG 0.654171 tig0010469:-27010 Msa1348500:intron
TTTGCATTGCAATGGATGAG+TGG 0.662275 tig0010469:-26073 Msa1348500:three_prime_UTR
TCGCGATGCAGCAATGATCG+AGG 0.670546 tig0010469:-29179 Msa1348500:CDS
TAAATACTGCCCATTCCCTG+TGG 0.681993 tig0010469:-28475 Msa1348500:CDS
TCACGACTAAGATGGCCCGA+AGG 0.691921 tig0010469:-26539 Msa1348500:CDS
ACGTCTTGTGAAGAGTGATG+TGG 0.700818 tig0010469:-29143 Msa1348500:CDS
ATAACCATTCAAATAACACA+AGG 0.717871 tig0010469:+26205 None:intergenic
AGAGTGATGTGGGATGCTCA+CGG 0.726542 tig0010469:-29132 Msa1348500:intron
AAGGCATTATAGAGCCCCTG+AGG 0.743741 tig0010469:-27939 Msa1348500:CDS
GTTACCTAAGATAACCTCAG+GGG 0.756792 tig0010469:+27925 None:intergenic
ATTCACGAACAAGATCCACA+GGG 0.786775 tig0010469:+28460 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTAAAATATTAGTTTGT+TGG - tig0010469:26705-26724 Msa1348500:intron 10.0%
!!! TTTCTTTAGTTTAATAAAAT+AGG - tig0010469:27024-27043 Msa1348500:intron 10.0%
!!! TTCTTTAGTTTAATAAAATA+GGG - tig0010469:27025-27044 Msa1348500:intron 10.0%
!!! TTTTGTATTATTTTGAAAAT+GGG - tig0010469:27745-27764 Msa1348500:intron 10.0%
!! AGAAAAAGTTAAAAATAATT+GGG + tig0010469:28938-28957 None:intergenic 10.0%
!! AAGAAAAAGTTAAAAATAAT+TGG + tig0010469:28939-28958 None:intergenic 10.0%
!!! TAATATTTTAAATAGCACAT+AGG + tig0010469:26699-26718 None:intergenic 15.0%
!!! TCTTTAGTTTAATAAAATAG+GGG - tig0010469:27026-27045 Msa1348500:intron 15.0%
!!! GTTTTGTATTATTTTGAAAA+TGG - tig0010469:27744-27763 Msa1348500:intron 15.0%
!! TTTAGAAAATCAAATAAACT+TGG + tig0010469:28052-28071 None:intergenic 15.0%
!!! TGTTTTATTATTATATCTCT+TGG - tig0010469:28185-28204 Msa1348500:CDS 15.0%
!! TTTAATGAAAATTACTTGAT+TGG - tig0010469:28470-28489 Msa1348500:CDS 15.0%
!!! TTTTATTTTTTTTTCGTGAA+AGG + tig0010469:29287-29306 None:intergenic 15.0%
!!! AAGTGATTTAATTAACTTTT+TGG + tig0010469:29362-29381 None:intergenic 15.0%
!! AATTATAATATTTAATCACC+TGG + tig0010469:29905-29924 None:intergenic 15.0%
!!! AAATTTTTATATCATTCAGA+GGG - tig0010469:30636-30655 Msa1348500:five_prime_UTR 15.0%
!! AATTCAACCATTAATGTAAA+TGG - tig0010469:26022-26041 Msa1348500:three_prime_UTR 20.0%
!! TTAGATACCATTTACATTAA+TGG + tig0010469:26032-26051 None:intergenic 20.0%
!! ACACATTAAATTGAGAAATA+GGG + tig0010469:26408-26427 None:intergenic 20.0%
!!! TTCATGGGTTTTATAAAATA+GGG + tig0010469:26749-26768 None:intergenic 20.0%
!!! TTTCATGGGTTTTATAAAAT+AGG + tig0010469:26750-26769 None:intergenic 20.0%
!!! AAGTTCGATTTTAAAAAAGA+GGG + tig0010469:26779-26798 None:intergenic 20.0%
!!! AAAGTTCGATTTTAAAAAAG+AGG + tig0010469:26780-26799 None:intergenic 20.0%
!!! ACAAGCTAATATTTTCAAAA+GGG + tig0010469:26814-26833 None:intergenic 20.0%
!!! AACAAGCTAATATTTTCAAA+AGG + tig0010469:26815-26834 None:intergenic 20.0%
!! AAAACAAATGTGAAAATAGA+GGG - tig0010469:26996-27015 Msa1348500:CDS 20.0%
!!! CTTTAGTTTAATAAAATAGG+GGG - tig0010469:27027-27046 Msa1348500:intron 20.0%
!!! TAGAGTTTTTTTTTTTGGAA+AGG - tig0010469:27468-27487 Msa1348500:intron 20.0%
!!! TTTTATCAAAACAAACTAAC+TGG + tig0010469:27667-27686 None:intergenic 20.0%
!! ACAAAATTGCAACATAAATT+GGG + tig0010469:27891-27910 None:intergenic 20.0%
!! AACAAAATTGCAACATAAAT+TGG + tig0010469:27892-27911 None:intergenic 20.0%
!!! TAACTTTTTCTTATACACTT+TGG - tig0010469:28947-28966 Msa1348500:intron 20.0%
!!! TTTATTTTCACGAAAATTCA+CGG - tig0010469:29086-29105 Msa1348500:intron 20.0%
!!! ACACTATTTTTTTTGTTTGA+GGG + tig0010469:29244-29263 None:intergenic 20.0%
!!! AACACTATTTTTTTTGTTTG+AGG + tig0010469:29245-29264 None:intergenic 20.0%
!! ACTTATAAAAGAGAGTTTAA+AGG + tig0010469:29325-29344 None:intergenic 20.0%
!! ATGAAAAATGCTAAATAGTA+CGG + tig0010469:29458-29477 None:intergenic 20.0%
!!! TTTTCATTAGTAAAACTGTT+AGG - tig0010469:29471-29490 Msa1348500:intron 20.0%
!!! TATGTAATACATTTTCATCA+TGG - tig0010469:29804-29823 Msa1348500:intron 20.0%
!!! TTAAAACACAGTTAATTTGA+TGG + tig0010469:29846-29865 None:intergenic 20.0%
!! AATAATTATGTTCAATAGAG+TGG + tig0010469:30516-30535 None:intergenic 20.0%
!! ACTCTATTGAACATAATTAT+TGG - tig0010469:30515-30534 Msa1348500:CDS 20.0%
!!! TTGGATACATTCTAATTTTT+TGG + tig0010469:30610-30629 None:intergenic 20.0%
!! GATATAAAAATTTCATCGTT+TGG + tig0010469:30629-30648 None:intergenic 20.0%
!!! GAAATTTTTATATCATTCAG+AGG - tig0010469:30635-30654 Msa1348500:five_prime_UTR 20.0%
!! CTAACAAAAATTGATAGTTG+TGG + tig0010469:25995-26014 None:intergenic 25.0%
! GTAAATGGTATCTAATTTCA+TGG - tig0010469:26037-26056 Msa1348500:three_prime_UTR 25.0%
! CACACATTAAATTGAGAAAT+AGG + tig0010469:26409-26428 None:intergenic 25.0%
!!! TGATTCAGCAAAATTGATTT+TGG - tig0010469:26467-26486 Msa1348500:intron 25.0%
!!! AGTTCGATTTTAAAAAAGAG+GGG + tig0010469:26778-26797 None:intergenic 25.0%
!! AAGCTAATATTTTCAAAAGG+GGG + tig0010469:26812-26831 None:intergenic 25.0%
!! CAAGCTAATATTTTCAAAAG+GGG + tig0010469:26813-26832 None:intergenic 25.0%
! TTGTCTTAAGATTCAACATT+GGG + tig0010469:26895-26914 None:intergenic 25.0%
! TTTGTCTTAAGATTCAACAT+TGG + tig0010469:26896-26915 None:intergenic 25.0%
!! CTCTATTTTCACATTTGTTT+TGG + tig0010469:26997-27016 None:intergenic 25.0%
! CAAAACAAATGTGAAAATAG+AGG - tig0010469:26995-27014 Msa1348500:CDS 25.0%
!! ACTAGGCTTAATTATACTTT+TGG + tig0010469:27054-27073 None:intergenic 25.0%
! AACAAACAAACAAACAAACT+AGG + tig0010469:27071-27090 None:intergenic 25.0%
!!! TTTTTTCTCACTCTTCAATT+TGG - tig0010469:27099-27118 Msa1348500:intron 25.0%
!!! TTCAATTTGGTGTTTATGAA+AGG - tig0010469:27112-27131 Msa1348500:intron 25.0%
! AGATAAAATTCTCAGCAAAA+TGG - tig0010469:27175-27194 Msa1348500:intron 25.0%
! GATAAAATTCTCAGCAAAAT+GGG - tig0010469:27176-27195 Msa1348500:intron 25.0%
!!! GAAACAAGAAGTATATTTTC+TGG + tig0010469:28361-28380 None:intergenic 25.0%
!! TAGGTAACGAAATATGTTTT+TGG - tig0010469:28643-28662 Msa1348500:intron 25.0%
!!! TAACGAAATATGTTTTTGGT+TGG - tig0010469:28647-28666 Msa1348500:intron 25.0%
! TCATCAACAAGAAATAGATT+TGG + tig0010469:29025-29044 None:intergenic 25.0%
!!! TCTTCTGTATCATTAGTTTT+TGG - tig0010469:30104-30123 Msa1348500:intron 25.0%
!!! CTTCTGTATCATTAGTTTTT+GGG - tig0010469:30105-30124 Msa1348500:intron 25.0%
! CCTGCATAAAGAATAATAAT+CGG + tig0010469:30180-30199 None:intergenic 25.0%
! ATACAACAAATCAGTTAATG+AGG + tig0010469:30236-30255 None:intergenic 25.0%
!!! TCATTAACTGATTTGTTGTA+TGG - tig0010469:30235-30254 Msa1348500:intron 25.0%
! ATAACCATTCAAATAACACA+AGG + tig0010469:30351-30370 None:intergenic 25.0%
!!! GACTACAATTTTGCTTTAAA+TGG - tig0010469:30381-30400 Msa1348500:intron 25.0%
! TGAACATAATTATTGGATAG+AGG - tig0010469:30522-30541 Msa1348500:exon 25.0%
TGGTATCTAATTTCATGGAA+AGG - tig0010469:26042-26061 Msa1348500:three_prime_UTR 30.0%
GGTATCTAATTTCATGGAAA+GGG - tig0010469:26043-26062 Msa1348500:three_prime_UTR 30.0%
!! TTACATACCTTTGGAATTGA+AGG + tig0010469:26122-26141 None:intergenic 30.0%
GAGGAAAATTTACATACCTT+TGG + tig0010469:26131-26150 None:intergenic 30.0%
AATCAAGAGAGTGAAATTGA+AGG + tig0010469:26153-26172 None:intergenic 30.0%
!! ATTTTAGGTACCCAGAAATT+TGG - tig0010469:26206-26225 Msa1348500:three_prime_UTR 30.0%
GAAAGAAGTTAGTTACATCT+AGG + tig0010469:26336-26355 None:intergenic 30.0%
!! GCTGTTTTCATCAGTTATAT+TGG - tig0010469:26523-26542 Msa1348500:CDS 30.0%
TAAGCACTTATTAGACTGTT+TGG + tig0010469:26614-26633 None:intergenic 30.0%
!!! ATTAAGGGTCTTTTTTGGAT+TGG + tig0010469:26660-26679 None:intergenic 30.0%
!!! CACAAATTAAGGGTCTTTTT+TGG + tig0010469:26665-26684 None:intergenic 30.0%
AGCATCAAGTCACAAATTAA+GGG + tig0010469:26675-26694 None:intergenic 30.0%
!! GTTCGATTTTAAAAAAGAGG+GGG + tig0010469:26777-26796 None:intergenic 30.0%
! AGCTAATATTTTCAAAAGGG+GGG + tig0010469:26811-26830 None:intergenic 30.0%
TGTCTTAAGATTCAACATTG+GGG + tig0010469:26894-26913 None:intergenic 30.0%
!!! GATACCTAAACTCACTTTTT+TGG - tig0010469:26927-26946 Msa1348500:intron 30.0%
GAATCCAAAAAAGTGAGTTT+AGG + tig0010469:26934-26953 None:intergenic 30.0%
! TTCCAAAAGCCACAATTTTT+AGG - tig0010469:26951-26970 Msa1348500:intron 30.0%
! TCCAAAAGCCACAATTTTTA+GGG - tig0010469:26952-26971 Msa1348500:intron 30.0%
!!! GTTTTTTGCCCTAAAAATTG+TGG + tig0010469:26963-26982 None:intergenic 30.0%
!!! TTTTTAGGGCAAAAAACATG+AGG - tig0010469:26966-26985 Msa1348500:CDS 30.0%
!! TTTGGTGTTTATGAAAGGTT+TGG - tig0010469:27117-27136 Msa1348500:intron 30.0%
CCAAAAAAAAAAACTCTAGC+AGG + tig0010469:27466-27485 None:intergenic 30.0%
!!! CCTGCTAGAGTTTTTTTTTT+TGG - tig0010469:27463-27482 Msa1348500:intron 30.0%
TTACAATGCATATGTGATTC+CGG + tig0010469:27594-27613 None:intergenic 30.0%
CAAAACAAACTAACTGGATA+TGG + tig0010469:27661-27680 None:intergenic 30.0%
!!! TTTGTGCTGCTTGTTTTTTT+AGG - tig0010469:27843-27862 Msa1348500:intron 30.0%
!!! TTTTTTAGGTCAGGAAGTAT+AGG - tig0010469:27857-27876 Msa1348500:intron 30.0%
ATCTATGAATAAATCCCACA+TGG + tig0010469:27959-27978 None:intergenic 30.0%
! TTCCTTTCAACGCATTTTAA+TGG - tig0010469:27999-28018 Msa1348500:CDS 30.0%
AAATTACTTGATTGGTACAG+AGG - tig0010469:28478-28497 Msa1348500:CDS 30.0%
AATTACTTGATTGGTACAGA+GGG - tig0010469:28479-28498 Msa1348500:CDS 30.0%
TGTCAGATGAAACACAATTT+AGG - tig0010469:28505-28524 Msa1348500:CDS 30.0%
ATAATGCCTTGTAGAAACAA+TGG + tig0010469:28604-28623 None:intergenic 30.0%
! CTACTGGAAACATTTTTAAC+AGG + tig0010469:28753-28772 None:intergenic 30.0%
AGGATAATATAAGATGAGCT+GGG + tig0010469:28815-28834 None:intergenic 30.0%
TAGGATAATATAAGATGAGC+TGG + tig0010469:28816-28835 None:intergenic 30.0%
ATAGTGAAGATCAAAGATCT+AGG + tig0010469:28835-28854 None:intergenic 30.0%
GCACAATCAAAATTGGAAAT+TGG + tig0010469:28901-28920 None:intergenic 30.0%
! CTTTTTCTTATACACTTTGG+TGG - tig0010469:28950-28969 Msa1348500:intron 30.0%
CATAATAATAGATACCGTTC+AGG + tig0010469:29132-29151 None:intergenic 30.0%
TGCAATTCAACCAAAGAAAA+AGG - tig0010469:29171-29190 Msa1348500:CDS 30.0%
AATTCAACCAAAGAAAAAGG+TGG - tig0010469:29174-29193 Msa1348500:CDS 30.0%
GGGAATTAATCTTAAGCAAA+CGG + tig0010469:29224-29243 None:intergenic 30.0%
! TTTTCCATCTATCAAGATGT+AGG - tig0010469:29625-29644 Msa1348500:intron 30.0%
GTTTCAGACTCATGAAAATT+TGG - tig0010469:29716-29735 Msa1348500:intron 30.0%
CCGATTATTATTCTTTATGC+AGG - tig0010469:30177-30196 Msa1348500:intron 30.0%
! TAAGTTGGAATCCTAAAGAA+AGG + tig0010469:30316-30335 None:intergenic 30.0%
!!! AGGCATTTGACTTTTTAAGT+TGG + tig0010469:30331-30350 None:intergenic 30.0%
!! AATGCCTTGTGTTATTTGAA+TGG - tig0010469:30344-30363 Msa1348500:intron 30.0%
GGATTTATCATTTATTGCAG+TGG - tig0010469:30402-30421 Msa1348500:intron 30.0%
GAATTATGTTGTACTCAAGA+AGG - tig0010469:30544-30563 Msa1348500:five_prime_UTR 30.0%
TAATTCCAGAGACAAGATAC+GGG + tig0010469:25951-25970 None:intergenic 35.0%
GTAATTCCAGAGACAAGATA+CGG + tig0010469:25952-25971 None:intergenic 35.0%
GGCCATTATGTCTTTAATCT+CGG - tig0010469:26297-26316 Msa1348500:CDS 35.0%
TTAATGTGTGTTTCGTTCAC+TGG - tig0010469:26419-26438 Msa1348500:intron 35.0%
CAGCATCAAGTCACAAATTA+AGG + tig0010469:26676-26695 None:intergenic 35.0%
! GCTAAAAATCACCATTTTGG+GGG + tig0010469:26867-26886 None:intergenic 35.0%
! CGCTAAAAATCACCATTTTG+GGG + tig0010469:26868-26887 None:intergenic 35.0%
! GCGCTAAAAATCACCATTTT+GGG + tig0010469:26869-26888 None:intergenic 35.0%
! AGCGCTAAAAATCACCATTT+TGG + tig0010469:26870-26889 None:intergenic 35.0%
ATTATATGGGTCTTCAACTC+AGG + tig0010469:27701-27720 None:intergenic 35.0%
GTTGAAGACCCATATAATAC+CGG - tig0010469:27703-27722 Msa1348500:intron 35.0%
TTGAAGACCCATATAATACC+GGG - tig0010469:27704-27723 Msa1348500:intron 35.0%
GTGGGATTTATTCATAGATC+TGG - tig0010469:27960-27979 Msa1348500:CDS 35.0%
CACCATTAAAATGCGTTGAA+AGG + tig0010469:28004-28023 None:intergenic 35.0%
!!! CGCATTTTAATGGTGTTATC+AGG - tig0010469:28009-28028 Msa1348500:CDS 35.0%
ACATGATGAATAAACGCTTG+AGG + tig0010469:28168-28187 None:intergenic 35.0%
!!! TATATTTTCTGGCTTCAGGT+CGG + tig0010469:28350-28369 None:intergenic 35.0%
!!! GAAGTATATTTTCTGGCTTC+AGG + tig0010469:28354-28373 None:intergenic 35.0%
TGTAAAGCTTCCTAGTTGTA+AGG - tig0010469:28390-28409 Msa1348500:intron 35.0%
ATACCAAGTACCTTACAACT+AGG + tig0010469:28403-28422 None:intergenic 35.0%
!! GCGATTAAGCTGATTGATTT+TGG - tig0010469:28546-28565 Msa1348500:intron 35.0%
TTGTAGAAACAATGGAGCTA+TGG + tig0010469:28596-28615 None:intergenic 35.0%
!! ATAGCTCCATTGTTTCTACA+AGG - tig0010469:28595-28614 Msa1348500:intron 35.0%
ATATAAGATGAGCTGGGAAA+TGG + tig0010469:28809-28828 None:intergenic 35.0%
TGTCAGTCATTACAGTACAA+AGG + tig0010469:28873-28892 None:intergenic 35.0%
! CATGAGAGCACAATCAAAAT+TGG + tig0010469:28908-28927 None:intergenic 35.0%
!! TTTTGATTGTGCTCTCATGA+TGG - tig0010469:28909-28928 Msa1348500:intron 35.0%
! AAGCGAAGTGCTATATAGTA+CGG - tig0010469:29061-29080 Msa1348500:intron 35.0%
GAACATATAAGCAACCTGAA+CGG - tig0010469:29115-29134 Msa1348500:intron 35.0%
AACGGTGCAACAAATTGAAA+CGG + tig0010469:29206-29225 None:intergenic 35.0%
! TGCATCTAAAATGACATTCC+AGG - tig0010469:29533-29552 Msa1348500:intron 35.0%
TAAAATGACATTCCAGGTCT+AGG - tig0010469:29539-29558 Msa1348500:intron 35.0%
AAAATGACATTCCAGGTCTA+GGG - tig0010469:29540-29559 Msa1348500:intron 35.0%
CATTCTCATTGAGTTATGCA+CGG - tig0010469:29598-29617 Msa1348500:intron 35.0%
!! ATGTAGGCATGTTTTGAATC+TGG - tig0010469:29641-29660 Msa1348500:intron 35.0%
!!! TGGTTTTAGCATTCTAACTG+TGG - tig0010469:29670-29689 Msa1348500:intron 35.0%
! TAACTGTGGAACTTTTGACA+GGG - tig0010469:29684-29703 Msa1348500:intron 35.0%
!! TAAGTTATGAAGCATTGACC+AGG - tig0010469:29884-29903 Msa1348500:intron 35.0%
ACGGAAAAATATTTCAAGCG+TGG - tig0010469:29990-30009 Msa1348500:intron 35.0%
ATAAATGCAGTGAAGAAGCT+TGG - tig0010469:30056-30075 Msa1348500:intron 35.0%
CTCTTGATCATCCTTTCTTT+AGG - tig0010469:30302-30321 Msa1348500:CDS 35.0%
CATTGCAATGCAAATACAGT+TGG + tig0010469:30474-30493 None:intergenic 35.0%
CAACTGTATTTGCATTGCAA+TGG - tig0010469:30472-30491 Msa1348500:CDS 35.0%
TCAAATATTGATGTCCCAGT+AGG + tig0010469:30679-30698 None:intergenic 35.0%
ACTGGGACATCAATATTTGA+AGG - tig0010469:30679-30698 Msa1348500:five_prime_UTR 35.0%
AATTGAACCCTAACTCCCAA+CGG - tig0010469:25884-25903 Msa1348500:three_prime_UTR 40.0%
GAATAAACCGTTGGGAGTTA+GGG + tig0010469:25894-25913 None:intergenic 40.0%
AGAATAAACCGTTGGGAGTT+AGG + tig0010469:25895-25914 None:intergenic 40.0%
TAACTCCCAACGGTTTATTC+TGG - tig0010469:25894-25913 Msa1348500:three_prime_UTR 40.0%
GAGAACCAGAATAAACCGTT+GGG + tig0010469:25902-25921 None:intergenic 40.0%
AGTTGTGGCGAATATGAAGA+TGG + tig0010469:25980-25999 None:intergenic 40.0%
!! CATACCTTTGGAATTGAAGG+AGG + tig0010469:26119-26138 None:intergenic 40.0%
CAAGAGAGTGAAATTGAAGG+AGG + tig0010469:26150-26169 None:intergenic 40.0%
CGCCGAGATTAAAGACATAA+TGG + tig0010469:26302-26321 None:intergenic 40.0%
AATAAGCTGAAAACAGCTCG+TGG - tig0010469:26558-26577 Msa1348500:CDS 40.0%
!!! TGTTGGCTTGATTGCACTTT+TGG - tig0010469:26722-26741 Msa1348500:intron 40.0%
!! AAAGAGGGGGCTATTTTCAT+GGG + tig0010469:26764-26783 None:intergenic 40.0%
!! AAAAGAGGGGGCTATTTTCA+TGG + tig0010469:26765-26784 None:intergenic 40.0%
!! ATTTTGGGGGCAAAAAGGAT+GGG + tig0010469:26854-26873 None:intergenic 40.0%
! GCCCTAAAAATTGTGGCTTT+TGG + tig0010469:26956-26975 None:intergenic 40.0%
TTAGGGCAAAAAACATGAGG+CGG - tig0010469:26969-26988 Msa1348500:CDS 40.0%
ATTCTCAGCAAAATGGGTGA+AGG - tig0010469:27182-27201 Msa1348500:intron 40.0%
CTTGATCGCTACATAATCTC+TGG + tig0010469:27331-27350 None:intergenic 40.0%
CAGAGATTATGTAGCGATCA+AGG - tig0010469:27329-27348 Msa1348500:intron 40.0%
AAAGGATACCTGCTAGAGTT+TGG - tig0010469:27486-27505 Msa1348500:intron 40.0%
ATCAGTAACCAAACTCTAGC+AGG + tig0010469:27497-27516 None:intergenic 40.0%
!! TCCTGAATTGGTTCGATTAC+CGG - tig0010469:27572-27591 Msa1348500:intron 40.0%
! TGGGTGTCATCATTCATGAT+TGG - tig0010469:27764-27783 Msa1348500:intron 40.0%
! GGGTGTCATCATTCATGATT+GGG - tig0010469:27765-27784 Msa1348500:intron 40.0%
AGAACAAGTAGACTATGTGC+AGG + tig0010469:27823-27842 None:intergenic 40.0%
!!! GCTGCTTGTTTTTTTAGGTC+AGG - tig0010469:27848-27867 Msa1348500:intron 40.0%
TATGTACACACATGTCCATG+TGG - tig0010469:27941-27960 Msa1348500:CDS 40.0%
ATGTACACACATGTCCATGT+GGG - tig0010469:27942-27961 Msa1348500:CDS 40.0%
TCATAGATCTGGAAACTGAG+TGG - tig0010469:27971-27990 Msa1348500:CDS 40.0%
! TATCAGGTCTTTGAGAAGCT+TGG - tig0010469:28025-28044 Msa1348500:CDS 40.0%
ATTCACGAACAAGATCCACA+GGG + tig0010469:28096-28115 None:intergenic 40.0%
AATTCACGAACAAGATCCAC+AGG + tig0010469:28097-28116 None:intergenic 40.0%
GTGGATCTTGTTCGTGAATT+TGG - tig0010469:28097-28116 Msa1348500:intron 40.0%
! TGAATTTGGACGACAGCTTT+TGG - tig0010469:28111-28130 Msa1348500:intron 40.0%
ACAAAGATACACTGCATCCT+GGG + tig0010469:28254-28273 None:intergenic 40.0%
AACAAAGATACACTGCATCC+TGG + tig0010469:28255-28274 None:intergenic 40.0%
! CTTCCTAGTTGTAAGGTACT+TGG - tig0010469:28397-28416 Msa1348500:intron 40.0%
AGCTTAATCGCACTAGACTT+AGG + tig0010469:28537-28556 None:intergenic 40.0%
GTTACCTAAGATAACCTCAG+GGG + tig0010469:28631-28650 None:intergenic 40.0%
CGTTACCTAAGATAACCTCA+GGG + tig0010469:28632-28651 None:intergenic 40.0%
TCGTTACCTAAGATAACCTC+AGG + tig0010469:28633-28652 None:intergenic 40.0%
!!! GTTTTTGGTTGGTCACAATG+TGG - tig0010469:28658-28677 Msa1348500:intron 40.0%
! AGCGAAGTGCTATATAGTAC+GGG - tig0010469:29062-29081 Msa1348500:intron 40.0%
GCTAAATAGTACGGAACTTG+TGG + tig0010469:29449-29468 None:intergenic 40.0%
CATGCCTACATCTTGATAGA+TGG + tig0010469:29632-29651 None:intergenic 40.0%
!! TGTTTTGAATCTGGAACAGC+TGG - tig0010469:29650-29669 Msa1348500:intron 40.0%
! CTAACTGTGGAACTTTTGAC+AGG - tig0010469:29683-29702 Msa1348500:intron 40.0%
! TCATGAAAATTTGGAGCACC+TGG - tig0010469:29725-29744 Msa1348500:intron 40.0%
!! GCAATGATGGAGAGAGTTTT+GGG - tig0010469:29747-29766 Msa1348500:intron 40.0%
GATCTTTGAACCATATGCTC+TGG + tig0010469:29780-29799 None:intergenic 40.0%
TTTGCTTCACAATATCTCGC+AGG - tig0010469:29964-29983 Msa1348500:intron 40.0%
TTGCTTCACAATATCTCGCA+GGG - tig0010469:29965-29984 Msa1348500:intron 40.0%
! GAAGAAGCTTGGTGATCTTA+AGG - tig0010469:30067-30086 Msa1348500:intron 40.0%
AGAAAGGATGATCAAGAGCT+TGG + tig0010469:30300-30319 None:intergenic 40.0%
TTTGCATTGCAATGGATGAG+TGG - tig0010469:30480-30499 Msa1348500:CDS 40.0%
GGAGAACCAGAATAAACCGT+TGG + tig0010469:25903-25922 None:intergenic 45.0%
CTGTGTCGTCTGTGTAAGAA+CGG + tig0010469:25924-25943 None:intergenic 45.0%
TCATGGAAAGGGAACGAACT+CGG - tig0010469:26054-26073 Msa1348500:three_prime_UTR 45.0%
TCCACCTCCTTCAATTCCAA+AGG - tig0010469:26112-26131 Msa1348500:three_prime_UTR 45.0%
!! ACCTTTGGAATTGAAGGAGG+TGG + tig0010469:26116-26135 None:intergenic 45.0%
CCAACCACTGCCAAATTTCT+GGG + tig0010469:26219-26238 None:intergenic 45.0%
ACCAACCACTGCCAAATTTC+TGG + tig0010469:26220-26239 None:intergenic 45.0%
!! AATTTGGCAGTGGTTGGTGA+CGG - tig0010469:26222-26241 Msa1348500:exon 45.0%
!! CATTTTGGGGGCAAAAAGGA+TGG + tig0010469:26855-26874 None:intergenic 45.0%
! CATCCTTTTTGCCCCCAAAA+TGG - tig0010469:26853-26872 Msa1348500:intron 45.0%
!! TCACCATTTTGGGGGCAAAA+AGG + tig0010469:26859-26878 None:intergenic 45.0%
TAGGGCAAAAAACATGAGGC+GGG - tig0010469:26970-26989 Msa1348500:CDS 45.0%
GCAAAATGGGTGAAGGTTAG+CGG - tig0010469:27189-27208 Msa1348500:intron 45.0%
ACATTCCAAAACTCGACCGA+AGG + tig0010469:27295-27314 None:intergenic 45.0%
!!! TCGGTCGAGTTTTGGAATGT+TGG - tig0010469:27295-27314 Msa1348500:intron 45.0%
!!! CGGTCGAGTTTTGGAATGTT+GGG - tig0010469:27296-27315 Msa1348500:intron 45.0%
ACGTCTTGTGAAGAGTGATG+TGG - tig0010469:27410-27429 Msa1348500:intron 45.0%
CGTCTTGTGAAGAGTGATGT+GGG - tig0010469:27411-27430 Msa1348500:intron 45.0%
GCTGTGTACAGATCCTGAAT+TGG - tig0010469:27560-27579 Msa1348500:intron 45.0%
TCCGGTAATCGAACCAATTC+AGG + tig0010469:27576-27595 None:intergenic 45.0%
AAGACCCATATAATACCGGG+TGG - tig0010469:27707-27726 Msa1348500:intron 45.0%
ACAAGTAGACTATGTGCAGG+TGG + tig0010469:27820-27839 None:intergenic 45.0%
TAAATACTGCCCATTCCCTG+TGG - tig0010469:28078-28097 Msa1348500:intron 45.0%
GAACAAGATCCACAGGGAAT+GGG + tig0010469:28090-28109 None:intergenic 45.0%
TGGAATCTGTAGCATGTCTG+TGG - tig0010469:28131-28150 Msa1348500:intron 45.0%
GGGACAAACTAAGCAAGCTA+AGG + tig0010469:28234-28253 None:intergenic 45.0%
!! TAGCTTGCTTAGTTTGTCCC+AGG - tig0010469:28234-28253 Msa1348500:CDS 45.0%
GTCAAGAACGACATTTGCTC+TGG + tig0010469:28713-28732 None:intergenic 45.0%
!! GTGCTGACCACCTTTTTCTT+TGG + tig0010469:29184-29203 None:intergenic 45.0%
CTTGTGGCCACGAAAATTCA+CGG + tig0010469:29433-29452 None:intergenic 45.0%
GGTCATCTCCATGTGATTTG+TGG - tig0010469:29564-29583 Msa1348500:intron 45.0%
CCAACACTCCACAAATCACA+TGG + tig0010469:29575-29594 None:intergenic 45.0%
! CCATGTGATTTGTGGAGTGT+TGG - tig0010469:29572-29591 Msa1348500:intron 45.0%
CTCATTGAGTTATGCACGGT+TGG - tig0010469:29602-29621 Msa1348500:intron 45.0%
AAACTCTCTCCATCATTGCC+AGG + tig0010469:29746-29765 None:intergenic 45.0%
!! GGCAATGATGGAGAGAGTTT+TGG - tig0010469:29746-29765 Msa1348500:intron 45.0%
TGAACCATATGCTCTGGTAG+AGG + tig0010469:29774-29793 None:intergenic 45.0%
TGCTTCACAATATCTCGCAG+GGG - tig0010469:29966-29985 Msa1348500:intron 45.0%
GTACTCAAGAAGGCTTGAGA+AGG - tig0010469:30554-30573 Msa1348500:five_prime_UTR 45.0%
!! ATATCATTCAGAGGGCACTC+TGG - tig0010469:30644-30663 Msa1348500:five_prime_UTR 45.0%
!!! TAATTTTAATTTGAAATTTT+AGG - tig0010469:26191-26210 Msa1348500:three_prime_UTR 5.0%
CGTTCTTACACAGACGACAC+AGG - tig0010469:25922-25941 Msa1348500:three_prime_UTR 50.0%
GGAATCCCGTATCTTGTCTC+TGG - tig0010469:25943-25962 Msa1348500:three_prime_UTR 50.0%
GGTACCCAGAAATTTGGCAG+TGG - tig0010469:26212-26231 Msa1348500:three_prime_UTR 50.0%
CCCAGAAATTTGGCAGTGGT+TGG - tig0010469:26216-26235 Msa1348500:three_prime_UTR 50.0%
TCACGATCGTCGTCTCTTCT+TGG + tig0010469:26276-26295 None:intergenic 50.0%
AGAAGAGACGACGATCGTGA+TGG - tig0010469:26276-26295 Msa1348500:CDS 50.0%
AGGGCAAAAAACATGAGGCG+GGG - tig0010469:26971-26990 Msa1348500:CDS 50.0%
CAGCATGTTGCTAGTGCTGT+AGG - tig0010469:27267-27286 Msa1348500:intron 50.0%
AGAGTGATGTGGGATGCTCA+CGG - tig0010469:27421-27440 Msa1348500:intron 50.0%
ATGGGTCTTCAACTCAGGTC+AGG + tig0010469:27696-27715 None:intergenic 50.0%
ACCCATATAATACCGGGTGG+TGG - tig0010469:27710-27729 Msa1348500:intron 50.0%
CCCACCACCCGGTATTATAT+GGG + tig0010469:27714-27733 None:intergenic 50.0%
CCCATATAATACCGGGTGGT+GGG - tig0010469:27711-27730 Msa1348500:intron 50.0%
CCATATAATACCGGGTGGTG+GGG - tig0010469:27712-27731 Msa1348500:intron 50.0%
CGAACAAGATCCACAGGGAA+TGG + tig0010469:28091-28110 None:intergenic 50.0%
! AAGGCATTATAGAGCCCCTG+AGG - tig0010469:28614-28633 Msa1348500:intron 50.0%
AGAGCCCCTGAGGTTATCTT+AGG - tig0010469:28624-28643 Msa1348500:intron 50.0%
CAGAGATGTGATGCAGCTAC+TGG + tig0010469:28769-28788 None:intergenic 50.0%
CAGTAGCTGCATCACATCTC+TGG - tig0010469:28767-28786 Msa1348500:intron 50.0%
TTCACGGACAGGCTAAACTG+CGG + tig0010469:29417-29436 None:intergenic 50.0%
! AGCCTGTCCGTGAATTTTCG+TGG - tig0010469:29423-29442 Msa1348500:intron 50.0%
ATGACATTCCAGGTCTAGGG+TGG - tig0010469:29543-29562 Msa1348500:intron 50.0%
! CTGTGGAACTTTTGACAGGG+AGG - tig0010469:29687-29706 Msa1348500:intron 50.0%
! TTTGGAGCACCTGGCAATGA+TGG - tig0010469:29734-29753 Msa1348500:intron 50.0%
CACAATATCTCGCAGGGGTA+CGG - tig0010469:29971-29990 Msa1348500:intron 50.0%
AGCGTGGATCACGACTAAGA+TGG - tig0010469:30006-30025 Msa1348500:intron 50.0%
TCCCTTGAAACAGCTCCTTC+GGG + tig0010469:30032-30051 None:intergenic 50.0%
CTCCCTTGAAACAGCTCCTT+CGG + tig0010469:30033-30052 None:intergenic 50.0%
CACGTCATGTTGAGTCGTCA+AGG - tig0010469:30209-30228 Msa1348500:intron 50.0%
CGAGCAGTAATGCGTTTGGA+TGG + tig0010469:30277-30296 None:intergenic 50.0%
TTGGCGAGCAGTAATGCGTT+TGG + tig0010469:30281-30300 None:intergenic 50.0%
TCTGGTAAGCAAGGCCTACT+GGG - tig0010469:30662-30681 Msa1348500:five_prime_UTR 50.0%
GAAACGACCTCGTCTCGCTT+GGG - tig0010469:26076-26095 Msa1348500:three_prime_UTR 55.0%
CGATCGTCGTCTCTTCTTGG+AGG + tig0010469:26273-26292 None:intergenic 55.0%
! GGGGGCAAAAAGGATGGGTT+GGG + tig0010469:26849-26868 None:intergenic 55.0%
TGGGGGCAAAAAGGATGGGT+TGG + tig0010469:26850-26869 None:intergenic 55.0%
GCTAGTGCTGTAGGCACCTT+CGG - tig0010469:27276-27295 Msa1348500:intron 55.0%
! AGGCACCTTCGGTCGAGTTT+TGG - tig0010469:27287-27306 Msa1348500:intron 55.0%
TCGCGATGCAGCAATGATCG+AGG - tig0010469:27374-27393 Msa1348500:intron 55.0%
CCCCACCACCCGGTATTATA+TGG + tig0010469:27715-27734 None:intergenic 55.0%
!! ATAATACCGGGTGGTGGGGT+AGG - tig0010469:27716-27735 Msa1348500:intron 55.0%
!! TAATACCGGGTGGTGGGGTA+GGG - tig0010469:27717-27736 Msa1348500:intron 55.0%
GCTTCAGGTCGGTGTGGATT+AGG + tig0010469:28339-28358 None:intergenic 55.0%
!! TTTCTGGCTTCAGGTCGGTG+TGG + tig0010469:28345-28364 None:intergenic 55.0%
TGAGCTGGGAAATGGTCGCT+GGG + tig0010469:28801-28820 None:intergenic 55.0%
ATGAGCTGGGAAATGGTCGC+TGG + tig0010469:28802-28821 None:intergenic 55.0%
GGCCACGAAAATTCACGGAC+AGG + tig0010469:29428-29447 None:intergenic 55.0%
GGGACCTCTACCAGAGCATA+TGG - tig0010469:29767-29786 Msa1348500:intron 55.0%
TCACGACTAAGATGGCCCGA+AGG - tig0010469:30014-30033 Msa1348500:intron 55.0%
! GCCCGAAGGAGCTGTTTCAA+GGG - tig0010469:30028-30047 Msa1348500:intron 55.0%
!! AGAGGGCACTCTGGTAAGCA+AGG - tig0010469:30653-30672 Msa1348500:five_prime_UTR 55.0%
CTCTGGTAAGCAAGGCCTAC+TGG - tig0010469:30661-30680 Msa1348500:five_prime_UTR 55.0%
GGAAACGACCTCGTCTCGCT+TGG - tig0010469:26075-26094 Msa1348500:three_prime_UTR 60.0%
!! TTGGCAGTGGTTGGTGACGG+TGG - tig0010469:26225-26244 Msa1348500:exon 60.0%
!! AATACCGGGTGGTGGGGTAG+GGG - tig0010469:27718-27737 Msa1348500:intron 60.0%
GGAGATGACCACCCTAGACC+TGG + tig0010469:29554-29573 None:intergenic 60.0%
! GGCCCGAAGGAGCTGTTTCA+AGG - tig0010469:30027-30046 Msa1348500:intron 60.0%
GCTGCATCCCAAGCGAGACG+AGG + tig0010469:26086-26105 None:intergenic 65.0%
CTATCCCCTACCCCACCACC+CGG + tig0010469:27725-27744 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
tig0010469 gene 25852 30723 25852 ID=Msa1348500;Name=Msa1348500
tig0010469 mRNA 25852 30723 25852 ID=Msa1348500-mRNA-1;Parent=Msa1348500;Name=Msa1348500-mRNA-1;_AED=0.29;_eAED=0.29;_QI=189|0.8|0.81|1|1|1|11|387|435
tig0010469 exon 25852 26376 25852 ID=Msa1348500-mRNA-1:exon:6466;Parent=Msa1348500-mRNA-1
tig0010469 exon 26487 26589 26487 ID=Msa1348500-mRNA-1:exon:6465;Parent=Msa1348500-mRNA-1
tig0010469 exon 26773 26870 26773 ID=Msa1348500-mRNA-1:exon:6464;Parent=Msa1348500-mRNA-1
tig0010469 exon 26956 27020 26956 ID=Msa1348500-mRNA-1:exon:6463;Parent=Msa1348500-mRNA-1
tig0010469 exon 27930 28077 27930 ID=Msa1348500-mRNA-1:exon:6462;Parent=Msa1348500-mRNA-1
tig0010469 exon 28164 28255 28164 ID=Msa1348500-mRNA-1:exon:6461;Parent=Msa1348500-mRNA-1
tig0010469 exon 28403 28544 28403 ID=Msa1348500-mRNA-1:exon:6460;Parent=Msa1348500-mRNA-1
tig0010469 exon 28966 29014 28966 ID=Msa1348500-mRNA-1:exon:6459;Parent=Msa1348500-mRNA-1
tig0010469 exon 29133 29385 29133 ID=Msa1348500-mRNA-1:exon:6458;Parent=Msa1348500-mRNA-1
tig0010469 exon 30236 30362 30236 ID=Msa1348500-mRNA-1:exon:6457;Parent=Msa1348500-mRNA-1
tig0010469 exon 30442 30723 30442 ID=Msa1348500-mRNA-1:exon:6456;Parent=Msa1348500-mRNA-1
tig0010469 five_prime_UTR 30535 30723 30535 ID=Msa1348500-mRNA-1:five_prime_utr;Parent=Msa1348500-mRNA-1
tig0010469 CDS 30442 30534 30442 ID=Msa1348500-mRNA-1:cds;Parent=Msa1348500-mRNA-1
tig0010469 CDS 30236 30362 30236 ID=Msa1348500-mRNA-1:cds;Parent=Msa1348500-mRNA-1
tig0010469 CDS 29133 29385 29133 ID=Msa1348500-mRNA-1:cds;Parent=Msa1348500-mRNA-1
tig0010469 CDS 28966 29014 28966 ID=Msa1348500-mRNA-1:cds;Parent=Msa1348500-mRNA-1
tig0010469 CDS 28403 28544 28403 ID=Msa1348500-mRNA-1:cds;Parent=Msa1348500-mRNA-1
tig0010469 CDS 28164 28255 28164 ID=Msa1348500-mRNA-1:cds;Parent=Msa1348500-mRNA-1
tig0010469 CDS 27930 28077 27930 ID=Msa1348500-mRNA-1:cds;Parent=Msa1348500-mRNA-1
tig0010469 CDS 26956 27020 26956 ID=Msa1348500-mRNA-1:cds;Parent=Msa1348500-mRNA-1
tig0010469 CDS 26773 26870 26773 ID=Msa1348500-mRNA-1:cds;Parent=Msa1348500-mRNA-1
tig0010469 CDS 26487 26589 26487 ID=Msa1348500-mRNA-1:cds;Parent=Msa1348500-mRNA-1
tig0010469 CDS 26239 26376 26239 ID=Msa1348500-mRNA-1:cds;Parent=Msa1348500-mRNA-1
tig0010469 three_prime_UTR 25852 26238 25852 ID=Msa1348500-mRNA-1:three_prime_utr;Parent=Msa1348500-mRNA-1
Gene Sequence

>Msa1348500

ATGGTATCTAATTTCATGGAAAGGGAACGAACTCGGAAACGACCTCGTCTCGCTTGGGATGCAGCTGCAGCTCCACCTCCTTCAATTCCAAAGGTACCCAGAAATTTGGCAGTGGTTGGTGACGGTGGAATCGAAAGAAAGTATGCTTCGCCTCCAAGAAGAGACGACGATCGTGATGGCCATTATGTCTTTAATCTCGGCGAAAATCTCACTCCTAGATCAAAATGGGTGAAGGTTAGCGGTCAAGTGCTCTCTGAATACAAGTTTAAATTTTTATATGACTCTGCTTGTGTCATTCAGCATGTTGCTAGTGCTGTAGGCACCTTCGGTCGAGTTTTGGAATGTTGGGATCGTCAAACCAGAGATTATGTAGCGATCAAGGTGATTAGAAGCATCAAGAAGTATCGCGATGCAGCAATGATCGAGGTTGATGTGCTTGAACGTCTTGTGAAGAGTGATGTGGGATGCTCACGCTGTGTACAGATCCTGAATTGGTTCGATTACCGGAATCACATATGCATTGTCTTTGAGAAGCTTGGACCAAGTTTATTTGATTTTCTAAAGAGAAATAAATACTGCCCATTCCCTGTGGATCTTGTTCGTGAATTTGGACGACAGCTTTTGGAATCTGTAGCATGTCTGTGGATTATTCTTGACCTCAAGCATATGCATGAACTACGCCTAATCCACACCGACCTGAAGCCAGAAAATATACTTCTTGTTTCTTCTGACTATGTAAAGCTTCCTAGTTGTAAGAGGGTTATGTCAGATGAAACACAATTTAGGTGCTTGCCTAAGTCTAGTGCGATTAAGCTGATTGATTTTGGTAGTACTGCATTTGCAAATCAGATCCATAGCTCCATTGTTTCTACAAGGCATTATAGAGCCCCTGAGGTTATCTTAGGTCTAGGGTGGTCATCTCCATGTGATTTGTGGAGTGTTGGATGCATTCTCATTGAGTTATGCACGGGAGGAGCATTGTTTCAGACTCATGAAAATTTGGAGCACCTGGCAATGATGGAGAGAGTTTTGGGACCTCTACCAGAGCATATGGTTCAAAGATCTAAGGGTACGGAAAAATATTTCAAGCGTGGATCACGACTAAGATGGCCCGAAGGAGCTGTTTCAAGGGAGAGCATAAATGCAGTGAAGAAGCTTGGTGATCTTAAGGATATTATATCACGTCATGTTGAGTCGTCAAGGTCCTCATTAACTGATTTGTTGTATGGCTTATTAACATATGAACCATCCAAACGCATTACTGCTCGCCAAGCTCTTGATCATCCTTTCTTTAGGATTCCAACTTAA
Protein sequence

>Msa1348500

MVSNFMERERTRKRPRLAWDAAAAPPPSIPKVPRNLAVVGDGGIERKYASPPRRDDDRDGHYVFNLGENLTPRSKWVKVSGQVLSEYKFKFLYDSACVIQHVASAVGTFGRVLECWDRQTRDYVAIKVIRSIKKYRDAAMIEVDVLERLVKSDVGCSRCVQILNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVACLWIILDLKHMHELRLIHTDLKPENILLVSSDYVKLPSCKRVMSDETQFRCLPKSSAIKLIDFGSTAFANQIHSSIVSTRHYRAPEVILGLGWSSPCDLWSVGCILIELCTGGALFQTHENLEHLAMMERVLGPLPEHMVQRSKGTEKYFKRGSRLRWPEGAVSRESINAVKKLGDLKDIISRHVESSRSSLTDLLYGLLTYEPSKRITARQALDHPFFRIPT*