Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0418300 | RHN56160.1 | 74.312 | 327 | 68 | 5 | 117 | 429 | 15 | 339 | 4.08e-159 | 484 |
| Msa0418300 | RHN56160.1 | 75.501 | 449 | 83 | 7 | 6 | 429 | 202 | 648 | 0.0 | 670 |
| Msa0418300 | RHN56160.1 | 76.786 | 448 | 80 | 5 | 6 | 429 | 511 | 958 | 0.0 | 683 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0418300 | sp|O82161|PHI1_TOBAC | 69.132 | 311 | 84 | 4 | 131 | 429 | 3 | 313 | 4.66e-150 | 431 |
| Msa0418300 | sp|O82161|PHI1_TOBAC | 85.217 | 115 | 13 | 1 | 5 | 115 | 175 | 289 | 7.61e-62 | 206 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0418300 | A0A396HS48 | 74.312 | 327 | 68 | 5 | 117 | 429 | 15 | 339 | 1.95e-159 | 484 |
| Msa0418300 | A0A396HS48 | 75.501 | 449 | 83 | 7 | 6 | 429 | 202 | 648 | 0.0 | 670 |
| Msa0418300 | A0A396HS48 | 76.786 | 448 | 80 | 5 | 6 | 429 | 511 | 958 | 0.0 | 683 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0418300 | Msa0450100 | 0.824396 | 8.255313e-54 | -8.615850e-47 |
| Msa0418300 | Msa0464670 | 0.904114 | 1.721060e-79 | -8.615850e-47 |
| Msa0418300 | Msa0510120 | 0.909022 | 9.012412e-82 | -8.615850e-47 |
| Msa0418300 | Msa0581390 | 0.824669 | 7.122217e-54 | -8.615850e-47 |
| Msa0418300 | Msa0719740 | 0.800049 | 1.729659e-48 | -8.615850e-47 |
| Msa0418300 | Msa0731990 | 0.828115 | 1.075476e-54 | -8.615850e-47 |
| Msa0418300 | Msa0853250 | 0.809013 | 2.333563e-50 | -8.615850e-47 |
| Msa0418300 | Msa1265290 | 0.812025 | 5.218413e-51 | -8.615850e-47 |
| Msa0418300 | Msa1337460 | 0.809196 | 2.132248e-50 | -8.615850e-47 |
| Msa0358010 | Msa0418300 | 0.949817 | 5.892590e-108 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0418300 | MtrunA17_Chr5g0426441 | 76.786 | 448 | 80 | 5 | 6 | 429 | 511 | 958 | 0.0 | 683 |
| Msa0418300 | MtrunA17_Chr5g0426441 | 75.501 | 449 | 83 | 7 | 6 | 429 | 202 | 648 | 0.0 | 670 |
| Msa0418300 | MtrunA17_Chr5g0426441 | 74.312 | 327 | 68 | 5 | 117 | 429 | 15 | 339 | 3.75e-163 | 484 |
| Msa0418300 | MtrunA17_Chr3g0116001 | 97.342 | 301 | 8 | 0 | 129 | 429 | 4 | 304 | 0.0 | 604 |
| Msa0418300 | MtrunA17_Chr3g0116001 | 76.000 | 125 | 23 | 2 | 10 | 130 | 171 | 292 | 1.12e-57 | 191 |
| Msa0418300 | MtrunA17_Chr3g0116011 | 94.014 | 284 | 17 | 0 | 146 | 429 | 21 | 304 | 0.0 | 557 |
| Msa0418300 | MtrunA17_Chr3g0116011 | 83.036 | 112 | 15 | 1 | 10 | 117 | 171 | 282 | 6.72e-59 | 194 |
| Msa0418300 | MtrunA17_Chr3g0115951 | 66.246 | 317 | 92 | 4 | 128 | 429 | 1 | 317 | 2.24e-141 | 406 |
| Msa0418300 | MtrunA17_Chr3g0115951 | 96.552 | 116 | 0 | 1 | 4 | 115 | 178 | 293 | 4.01e-73 | 232 |
| Msa0418300 | MtrunA17_Chr4g0050321 | 60.650 | 277 | 100 | 3 | 157 | 429 | 29 | 300 | 5.78e-116 | 341 |
| Msa0418300 | MtrunA17_Chr4g0050321 | 66.667 | 126 | 35 | 2 | 9 | 130 | 166 | 288 | 3.04e-50 | 172 |
| Msa0418300 | MtrunA17_Chr2g0279311 | 52.716 | 313 | 131 | 6 | 122 | 429 | 4 | 304 | 3.30e-113 | 334 |
| Msa0418300 | MtrunA17_Chr2g0279311 | 64.800 | 125 | 37 | 2 | 10 | 130 | 171 | 292 | 1.26e-48 | 167 |
| Msa0418300 | MtrunA17_Chr4g0018171 | 35.690 | 297 | 164 | 8 | 150 | 426 | 52 | 341 | 4.13e-46 | 162 |
| Msa0418300 | MtrunA17_Chr4g0018171 | 40.909 | 110 | 59 | 2 | 13 | 117 | 215 | 323 | 2.41e-12 | 67.8 |
| Msa0418300 | MtrunA17_Chr1g0188071 | 36.120 | 299 | 171 | 8 | 145 | 426 | 46 | 341 | 1.20e-45 | 161 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0418300 | AT4G08950.1 | 69.900 | 299 | 75 | 6 | 146 | 429 | 16 | 314 | 1.02e-142 | 410 |
| Msa0418300 | AT4G08950.1 | 87.387 | 111 | 10 | 1 | 9 | 115 | 180 | 290 | 6.66e-62 | 203 |
| Msa0418300 | AT1G35140.1 | 62.987 | 308 | 102 | 4 | 132 | 428 | 2 | 308 | 1.08e-136 | 394 |
| Msa0418300 | AT1G35140.1 | 78.571 | 112 | 20 | 1 | 10 | 117 | 176 | 287 | 3.36e-56 | 188 |
| Msa0418300 | AT5G64260.1 | 56.452 | 310 | 120 | 6 | 130 | 429 | 1 | 305 | 1.93e-116 | 343 |
| Msa0418300 | AT5G64260.1 | 69.106 | 123 | 31 | 2 | 12 | 130 | 174 | 293 | 2.77e-52 | 177 |
| Msa0418300 | AT5G09440.1 | 60.837 | 263 | 83 | 5 | 171 | 429 | 32 | 278 | 1.35e-102 | 306 |
| Msa0418300 | AT5G09440.1 | 66.087 | 115 | 31 | 2 | 3 | 117 | 150 | 256 | 7.28e-45 | 157 |
| Msa0418300 | AT5G51550.1 | 38.047 | 297 | 165 | 8 | 146 | 426 | 38 | 331 | 6.79e-49 | 170 |
| Msa0418300 | AT5G51550.1 | 44.545 | 110 | 55 | 3 | 13 | 117 | 205 | 313 | 3.97e-14 | 73.6 |
| Msa0418300 | AT2G35150.1 | 37.224 | 317 | 170 | 10 | 135 | 425 | 3 | 316 | 9.66e-47 | 164 |
| Msa0418300 | AT2G35150.1 | 43.182 | 88 | 40 | 2 | 9 | 86 | 181 | 268 | 4.64e-12 | 67.4 |
| Msa0418300 | AT3G02970.1 | 31.186 | 295 | 162 | 7 | 173 | 427 | 37 | 330 | 1.56e-43 | 155 |
| Msa0418300 | AT3G02970.1 | 36.090 | 133 | 65 | 1 | 5 | 117 | 178 | 310 | 1.57e-18 | 86.7 |
| Msa0418300 | AT2G17230.1 | 35.473 | 296 | 170 | 9 | 149 | 426 | 65 | 357 | 1.72e-43 | 156 |
Find 143 sgRNAs with CRISPR-Local
Find 485 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCTTTCACCAACCTATTTA+TGG | 0.088479 | 3_2:+66002054 | Msa0418300:CDS |
| TCAGCTTGTCCTGGTGTTTA+TGG | 0.171889 | 3_2:+65996269 | Msa0418300:CDS |
| GCTTCAAGAGGTGCTTCTTT+GGG | 0.216799 | 3_2:-66002201 | None:intergenic |
| AGCTTCAAGAGGTGCTTCTT+TGG | 0.249821 | 3_2:-66002202 | None:intergenic |
| TTGCAAAATTTGCTTACATT+TGG | 0.273951 | 3_2:+65996030 | Msa0418300:CDS |
| CCCACAGGTAAGCAAATTTA+TGG | 0.282395 | 3_2:-66001990 | None:intergenic |
| TGATGGAATGGTGATAAATT+TGG | 0.283166 | 3_2:+65996163 | Msa0418300:CDS |
| TCAAGGCCCACATCGTTATT+TGG | 0.293974 | 3_2:-66002102 | None:intergenic |
| GATTAACGTGGCTAGTTTAT+TGG | 0.303246 | 3_2:+66002134 | Msa0418300:CDS |
| GAAGAGGGCCTTTGTGGTAT+TGG | 0.311173 | 3_2:-66001597 | None:intergenic |
| GCGCTTTGTGGACCGTAAAT+TGG | 0.317106 | 3_2:-65996107 | None:intergenic |
| CCATTTCACCAACCAATTTA+CGG | 0.318307 | 3_2:+65996095 | Msa0418300:CDS |
| CCTTTCACCAACCTATTTAT+GGG | 0.318942 | 3_2:+66002055 | Msa0418300:CDS |
| GTAGAGAAATGAAGAGGAAT+AGG | 0.319549 | 3_2:-66001519 | None:intergenic |
| TGCAAAATTTGCTTACATTT+GGG | 0.320080 | 3_2:+65996031 | Msa0418300:CDS |
| GGGCTTTGAGGCCCATAAAT+AGG | 0.320497 | 3_2:-66002066 | None:intergenic |
| ACCACGTAGCGACGGATGGC+TGG | 0.345858 | 3_2:-66001729 | None:intergenic |
| AGTGATGAAATCGGAGATTA+TGG | 0.355272 | 3_2:-66001680 | None:intergenic |
| TCGGCTGACGTGGTAGTTGA+TGG | 0.357923 | 3_2:+66001925 | Msa0418300:CDS |
| GGCGTTTGTCTTTGAGCCCT+TGG | 0.361171 | 3_2:-66001884 | None:intergenic |
| GACGGATGGCTGGGGTTTGA+TGG | 0.371713 | 3_2:-66001719 | None:intergenic |
| CTTCTTCTTCAATGGAATCC+AGG | 0.386769 | 3_2:+65995997 | None:intergenic |
| TTGCTTGTTGATTCTACTAC+TGG | 0.388699 | 3_2:+65996323 | Msa0418300:CDS |
| GTGACGAATCCATTTGGAAA+TGG | 0.389836 | 3_2:+66002165 | Msa0418300:CDS |
| TTATAACTTGCACCACTTGT+TGG | 0.391992 | 3_2:-66002294 | None:intergenic |
| CCGTAAATTGGTTGGTGAAA+TGG | 0.399220 | 3_2:-65996095 | None:intergenic |
| CGGTGAGAAGAGGGCCTTTG+TGG | 0.401444 | 3_2:-66001603 | None:intergenic |
| GGAACAGCAACAAACCCTTT+TGG | 0.401625 | 3_2:+65996200 | Msa0418300:CDS |
| AACGTGGCTAGTTTATTGGC+TGG | 0.402914 | 3_2:+66002138 | Msa0418300:CDS |
| AACAACGATGTAGGACTTGA+TGG | 0.404400 | 3_2:+65996146 | Msa0418300:CDS |
| ACCGTACCATATGAGATTGA+TGG | 0.405288 | 3_2:-66001635 | None:intergenic |
| TTCTTGCTGCTGAGCTCAAA+TGG | 0.405483 | 3_2:-66001543 | None:intergenic |
| GGAAATTGAAGTGATGAAAT+CGG | 0.409961 | 3_2:-66001689 | None:intergenic |
| AGCACCTCTTGAAGCTGGTT+CGG | 0.414779 | 3_2:+66002209 | Msa0418300:CDS |
| TATAACGCTAACGGCGTCAA+TGG | 0.419828 | 3_2:+66002312 | Msa0418300:CDS |
| GCAACCAATGGTGCGCTTTG+TGG | 0.422076 | 3_2:-65996119 | None:intergenic |
| GCAACTAACGGTGGGCTTTG+AGG | 0.422767 | 3_2:-66002078 | None:intergenic |
| TGAAAGTAACCATTTCCAAA+AGG | 0.429612 | 3_2:-65996215 | None:intergenic |
| AAGAGGTTCCCAGCGTAGCC+AGG | 0.432432 | 3_2:-66002264 | None:intergenic |
| TCAAGTCCTACATCGTTGTT+TGG | 0.434820 | 3_2:-65996143 | None:intergenic |
| GGGGCTTACCCTGGCTACGC+TGG | 0.436220 | 3_2:+66002255 | Msa0418300:CDS |
| GGGGTCGTGACGAATCCATT+TGG | 0.436454 | 3_2:+66002159 | Msa0418300:CDS |
| CTGGGGTTTGATGGTGGGTG+AGG | 0.436868 | 3_2:-66001710 | None:intergenic |
| ATCGGAGATTATGGCACGTT+GGG | 0.438644 | 3_2:-66001671 | None:intergenic |
| GAAAGTAACCATTTCCAAAA+GGG | 0.440576 | 3_2:-65996214 | None:intergenic |
| AATAACGATGTGGGCCTTGA+CGG | 0.443160 | 3_2:+66002105 | Msa0418300:CDS |
| GAAGCTGGTTCGGCTTGTAC+TGG | 0.446938 | 3_2:+66002219 | Msa0418300:CDS |
| GAAGCTGCTTCAGCTTGTCC+TGG | 0.453010 | 3_2:+65996260 | Msa0418300:CDS |
| ACGTGGCTAGTTTATTGGCT+GGG | 0.455160 | 3_2:+66002139 | Msa0418300:CDS |
| CGAAGTGAGAACCACGTTGA+TGG | 0.455562 | 3_2:-66001905 | None:intergenic |
| TGACGAATCCATTTGGAAAT+GGG | 0.457201 | 3_2:+66002166 | Msa0418300:CDS |
| AAATCTCCATCAATCTCATA+TGG | 0.458137 | 3_2:+66001629 | Msa0418300:CDS |
| ACCGTGTGTCCCACATCTAC+TGG | 0.461256 | 3_2:-66001956 | None:intergenic |
| TAGAACAAACCGAGGTTGTC+GGG | 0.463906 | 3_2:-66002365 | None:intergenic |
| GGATGGCTGGGGTTTGATGG+TGG | 0.467789 | 3_2:-66001716 | None:intergenic |
| CCACGTAGCGACGGATGGCT+GGG | 0.474139 | 3_2:-66001728 | None:intergenic |
| CTTCAAGAGGTGCTTCTTTG+GGG | 0.475380 | 3_2:-66002200 | None:intergenic |
| CGGCTGACGTGGTAGTTGAT+GGG | 0.476749 | 3_2:+66001926 | Msa0418300:CDS |
| TCGGCTTGTACTGGAGAGTT+CGG | 0.477162 | 3_2:+66002228 | Msa0418300:CDS |
| TGGCTACGCTGGGAACCTCT+TGG | 0.482318 | 3_2:+66002266 | Msa0418300:CDS |
| CGCTACGTGGTGGAAATTAA+CGG | 0.486698 | 3_2:+66001741 | Msa0418300:CDS |
| GATGGCTGGGGTTTGATGGT+GGG | 0.488062 | 3_2:-66001715 | None:intergenic |
| AAGGGCCATGCGCATTGACC+TGG | 0.488704 | 3_2:-66002036 | None:intergenic |
| TGATAGTACCCATTTCCAAA+TGG | 0.490233 | 3_2:-66002174 | None:intergenic |
| ACGCTAACGGCGTCAATGGA+AGG | 0.493232 | 3_2:+66002316 | Msa0418300:CDS |
| TGTCCTGGTGTTTATGGTAA+AGG | 0.498489 | 3_2:+65996275 | Msa0418300:CDS |
| TGTACTGGAGAGTTCGGTAA+AGG | 0.500755 | 3_2:+66002234 | Msa0418300:CDS |
| CCATAAATAGGTTGGTGAAA+GGG | 0.501451 | 3_2:-66002054 | None:intergenic |
| GGTGCTTACCCTGGTTATGC+TGG | 0.504722 | 3_2:+65996296 | Msa0418300:CDS |
| GTACTGGAGAGTTCGGTAAA+GGG | 0.504851 | 3_2:+66002235 | Msa0418300:CDS |
| AAATTTGCTTACATTTGGGT+TGG | 0.505466 | 3_2:+65996035 | Msa0418300:CDS |
| CTTGACGAGAATTACTCATT+CGG | 0.506476 | 3_2:+66001823 | Msa0418300:CDS |
| AACTCAGAAACACAGTGTCC+AGG | 0.509516 | 3_2:+65996059 | Msa0418300:CDS |
| CTACGCTGGGAACCTCTTGG+TGG | 0.511453 | 3_2:+66002269 | Msa0418300:CDS |
| CGGTCCACAAAGCGCACCAT+TGG | 0.512236 | 3_2:+65996115 | Msa0418300:CDS |
| AGCAAATCACCAGCATAACC+AGG | 0.517128 | 3_2:-65996305 | None:intergenic |
| TTTGGAAATGGGTACTATCA+AGG | 0.519030 | 3_2:+66002177 | Msa0418300:CDS |
| CGTGGCTAGTTTATTGGCTG+GGG | 0.521206 | 3_2:+66002140 | Msa0418300:CDS |
| TCGTTATTTGGTGCAACTAA+CGG | 0.527425 | 3_2:-66002090 | None:intergenic |
| AGTGTCCAGGGTTATGTGCT+TGG | 0.528873 | 3_2:+65996072 | Msa0418300:CDS |
| ACCATAAATTTGCTTACCTG+TGG | 0.529298 | 3_2:+66001989 | Msa0418300:CDS |
| AAAGAAGCACCTCTTGAAGC+TGG | 0.534172 | 3_2:+66002204 | Msa0418300:CDS |
| GTAGAACAAACCGAGGTTGT+CGG | 0.534684 | 3_2:-66002366 | None:intergenic |
| TTCCACCACGTAGCGACGGA+TGG | 0.537332 | 3_2:-66001733 | None:intergenic |
| AATGGAATCCAGGAAAGGTA+AGG | 0.543626 | 3_2:+65996007 | None:intergenic |
| GAGATTATGGCACGTTGGGT+AGG | 0.547244 | 3_2:-66001667 | None:intergenic |
| CAAAACCTCGTGCTCACAAG+AGG | 0.549913 | 3_2:+66001790 | Msa0418300:CDS |
| GGCGCTAGTTTCAATGCTCA+TGG | 0.551657 | 3_2:+65996344 | Msa0418300:CDS |
| CCCATAAATAGGTTGGTGAA+AGG | 0.558441 | 3_2:-66002055 | None:intergenic |
| TAAATTTGCTTACCTGTGGG+TGG | 0.560409 | 3_2:+66001993 | Msa0418300:CDS |
| CACAAAGGCCCTCTTCTCAC+CGG | 0.560896 | 3_2:+66001604 | Msa0418300:CDS |
| TTTGAGGCCCATAAATAGGT+TGG | 0.561084 | 3_2:-66002062 | None:intergenic |
| TCCATCAATCTCATATGGTA+CGG | 0.562294 | 3_2:+66001634 | Msa0418300:CDS |
| CGTTAATCACCATGCCGTCA+AGG | 0.566717 | 3_2:-66002119 | None:intergenic |
| GCTTCAAGAGGTGCTTCAGA+AGG | 0.567284 | 3_2:-65996242 | None:intergenic |
| ACTCAGAAACACAGTGTCCA+GGG | 0.569464 | 3_2:+65996060 | Msa0418300:CDS |
| GGGCTTACCCTGGCTACGCT+GGG | 0.570670 | 3_2:+66002256 | Msa0418300:CDS |
| TACTGGAGAGTTCGGTAAAG+GGG | 0.572083 | 3_2:+66002236 | Msa0418300:CDS |
| TTTGTGGACCGTAAATTGGT+TGG | 0.572936 | 3_2:-65996103 | None:intergenic |
| CGAATGAGTAATTCTCGTCA+AGG | 0.573752 | 3_2:-66001822 | None:intergenic |
| TAATTTCCACCACGTAGCGA+CGG | 0.575006 | 3_2:-66001737 | None:intergenic |
| TATTTGTAAGAGGAAACAAA+AGG | 0.575893 | 3_2:-66001460 | None:intergenic |
| GTTGCACCAAACAACGATGT+AGG | 0.577934 | 3_2:+65996137 | Msa0418300:CDS |
| TATGGTAAAGGTGCTTACCC+TGG | 0.580611 | 3_2:+65996287 | Msa0418300:CDS |
| ACTCTTTGACCCGACAACCT+CGG | 0.582146 | 3_2:+66002356 | Msa0418300:CDS |
| AGAGGTTCCCAGCGTAGCCA+GGG | 0.593428 | 3_2:-66002263 | None:intergenic |
| AAATTTGCTTACCTGTGGGT+GGG | 0.596904 | 3_2:+66001994 | Msa0418300:CDS |
| TCCAGTAGATGTGGGACACA+CGG | 0.597099 | 3_2:+66001955 | Msa0418300:CDS |
| CACGTAGCGACGGATGGCTG+GGG | 0.598025 | 3_2:-66001727 | None:intergenic |
| TCTTCAATGGAATCCAGGAA+AGG | 0.598344 | 3_2:+65996002 | None:intergenic |
| GTTGTCGGGTCAAAGAGTGC+GGG | 0.601302 | 3_2:-66002351 | None:intergenic |
| TTCGGTAAAGGGGCTTACCC+TGG | 0.601683 | 3_2:+66002246 | Msa0418300:CDS |
| TCGTTGTTTGGTGCAACCAA+TGG | 0.602504 | 3_2:-65996131 | None:intergenic |
| CCATAAATTTGCTTACCTGT+GGG | 0.602576 | 3_2:+66001990 | Msa0418300:CDS |
| AATGTCCAGGTCAATGCGCA+TGG | 0.604196 | 3_2:+66002031 | Msa0418300:CDS |
| CGATGTGGGCCTTGACGGCA+TGG | 0.604938 | 3_2:+66002110 | Msa0418300:CDS |
| CATCAACGTGGTTCTCACTT+CGG | 0.614919 | 3_2:+66001906 | Msa0418300:CDS |
| AATTCAGAGACACAATGTCC+AGG | 0.618178 | 3_2:+66002018 | Msa0418300:CDS |
| CAAGCTGAAGCAGCTTCAAG+AGG | 0.620549 | 3_2:-65996254 | None:intergenic |
| GGTTCTCACTTCGGCTGACG+TGG | 0.623744 | 3_2:+66001915 | Msa0418300:CDS |
| GGTTGTCGGGTCAAAGAGTG+CGG | 0.623998 | 3_2:-66002352 | None:intergenic |
| AGCCATCCGTCGCTACGTGG+TGG | 0.627716 | 3_2:+66001731 | Msa0418300:CDS |
| AATGGAGTAGAGAAATGAAG+AGG | 0.631823 | 3_2:-66001525 | None:intergenic |
| TCTCTGAATTACCCACCCAC+AGG | 0.634449 | 3_2:-66002005 | None:intergenic |
| TATTTGGTGCAACTAACGGT+GGG | 0.635436 | 3_2:-66002086 | None:intergenic |
| CGATGTAGGACTTGATGGAA+TGG | 0.638212 | 3_2:+65996151 | Msa0418300:CDS |
| AATCGGAGATTATGGCACGT+TGG | 0.639144 | 3_2:-66001672 | None:intergenic |
| TTATTTGGTGCAACTAACGG+TGG | 0.641683 | 3_2:-66002087 | None:intergenic |
| CTCTTGGTGGATCCAACAAG+TGG | 0.642396 | 3_2:+66002282 | Msa0418300:CDS |
| CAAGCCGAACCAGCTTCAAG+AGG | 0.642603 | 3_2:-66002213 | None:intergenic |
| AGTTGCACCAAATAACGATG+TGG | 0.642974 | 3_2:+66002095 | Msa0418300:CDS |
| CCCAGCCATCCGTCGCTACG+TGG | 0.645628 | 3_2:+66001728 | Msa0418300:CDS |
| GTTGCACCAAATAACGATGT+GGG | 0.647354 | 3_2:+66002096 | Msa0418300:CDS |
| GGTGCAAGTTATAACGCTAA+CGG | 0.658111 | 3_2:+66002303 | Msa0418300:CDS |
| AATGGCCAAGCACATAACCC+TGG | 0.674129 | 3_2:-65996077 | None:intergenic |
| TTAAAATTCCAATACCACAA+AGG | 0.675184 | 3_2:+66001589 | Msa0418300:CDS |
| CACTTGTTGGATCCACCAAG+AGG | 0.677293 | 3_2:-66002281 | None:intergenic |
| GTGAACCTCTTGTGAGCACG+AGG | 0.688439 | 3_2:-66001795 | None:intergenic |
| GCAAATCACCAGCATAACCA+GGG | 0.695085 | 3_2:-65996304 | None:intergenic |
| GCACCTTTACCATAAACACC+AGG | 0.705559 | 3_2:-65996278 | None:intergenic |
| TACTAGAGTAGAACAAACCG+AGG | 0.705627 | 3_2:-66002373 | None:intergenic |
| TGACGGCATGGTGATTAACG+TGG | 0.706791 | 3_2:+66002122 | Msa0418300:CDS |
| AAAGACAAACGCCATCAACG+TGG | 0.767227 | 3_2:+66001894 | Msa0418300:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTATAATTTTTTGATTATG+CGG | + | chr3_2:65996527-65996546 | Msa0418300:intron | 10.0% |
| !!! | TTGCTTTTTTTAAAATATAT+TGG | + | chr3_2:65996585-65996604 | Msa0418300:intron | 10.0% |
| !! | TATTATTTATCTTTGTATAT+TGG | + | chr3_2:65997228-65997247 | Msa0418300:intron | 10.0% |
| !!! | TATATTGATACTTTTATTTT+GGG | - | chr3_2:65998052-65998071 | None:intergenic | 10.0% |
| !!! | TTATATTGATACTTTTATTT+TGG | - | chr3_2:65998053-65998072 | None:intergenic | 10.0% |
| !!! | TTTTAAATAGAAATCTTTTA+AGG | + | chr3_2:65998829-65998848 | Msa0418300:intron | 10.0% |
| !! | TATTCTTAATAAAAAAAACT+CGG | + | chr3_2:65998856-65998875 | Msa0418300:intron | 10.0% |
| !! | TTATAGAAAATATTCAAAAT+TGG | + | chr3_2:65998943-65998962 | Msa0418300:intron | 10.0% |
| !!! | AATTTGTAATTAAATTTTGT+GGG | - | chr3_2:66000497-66000516 | None:intergenic | 10.0% |
| !!! | AAATTTGTAATTAAATTTTG+TGG | - | chr3_2:66000498-66000517 | None:intergenic | 10.0% |
| !!! | CAAAATTACATATTTTCAAA+TGG | + | chr3_2:65997298-65997317 | Msa0418300:intron | 15.0% |
| !! | TTCATTCCATTAAAAATAAA+AGG | + | chr3_2:65997490-65997509 | Msa0418300:intron | 15.0% |
| !! | TCATTCCATTAAAAATAAAA+GGG | + | chr3_2:65997491-65997510 | Msa0418300:intron | 15.0% |
| !!! | ATTAACCCTTTTATTTTTAA+TGG | - | chr3_2:65997499-65997518 | None:intergenic | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+AGG | - | chr3_2:65997978-65997997 | None:intergenic | 15.0% |
| !! | AGATAAAAAGTAATAAAATC+TGG | - | chr3_2:65997757-65997776 | None:intergenic | 15.0% |
| !! | TTCAAAAATTTAAGAGTTTA+AGG | + | chr3_2:65997888-65997907 | Msa0418300:intron | 15.0% |
| !!! | ATAAAAGTATCAATATAAGA+AGG | + | chr3_2:65998055-65998074 | Msa0418300:intron | 15.0% |
| !!! | ATATACCATTTTCTTTTTTT+TGG | - | chr3_2:65998106-65998125 | None:intergenic | 15.0% |
| !!! | ACCTTGTTTAAATTTATTTT+AGG | + | chr3_2:65998276-65998295 | Msa0418300:intron | 15.0% |
| !!! | CCTTGTTTAAATTTATTTTA+GGG | + | chr3_2:65998277-65998296 | Msa0418300:intron | 15.0% |
| !!! | CTTGTTTAAATTTATTTTAG+GGG | + | chr3_2:65998278-65998297 | Msa0418300:intron | 15.0% |
| !!! | ATAATAACTCTTTTTATACA+AGG | + | chr3_2:65998439-65998458 | Msa0418300:intron | 15.0% |
| !!! | AACGAAATATTTTAATATCA+AGG | + | chr3_2:65998543-65998562 | Msa0418300:intron | 15.0% |
| !! | TTGAAATAGGATAAAATAAA+GGG | - | chr3_2:65998678-65998697 | None:intergenic | 15.0% |
| !! | ATTGAAATAGGATAAAATAA+AGG | - | chr3_2:65998679-65998698 | None:intergenic | 15.0% |
| !!! | TTTTACTTGTATTTCATAAA+TGG | + | chr3_2:65999060-65999079 | Msa0418300:intron | 15.0% |
| !! | TTTACTTGTATTTCATAAAT+GGG | + | chr3_2:65999061-65999080 | Msa0418300:intron | 15.0% |
| !! | TAAGTATATTGAAAATATCA+TGG | - | chr3_2:65999462-65999481 | None:intergenic | 15.0% |
| !! | ATATTAATTGCACAATTAAT+TGG | + | chr3_2:65999496-65999515 | Msa0418300:intron | 15.0% |
| !! | TTTAATTACAAATTTAAACG+AGG | + | chr3_2:66000503-66000522 | Msa0418300:intron | 15.0% |
| !! | TTAATTACAAATTTAAACGA+GGG | + | chr3_2:66000504-66000523 | Msa0418300:intron | 15.0% |
| !! | ATAAAAACCAATAAATAACA+CGG | + | chr3_2:66001152-66001171 | Msa0418300:intron | 15.0% |
| !! | GTACAAATAAGAAATTATGT+AGG | + | chr3_2:65996486-65996505 | Msa0418300:intron | 20.0% |
| !!! | ATAAAGATGAACATAGTTTT+GGG | + | chr3_2:65996694-65996713 | Msa0418300:intron | 20.0% |
| !! | TACTTAGTACTATTACTATT+AGG | - | chr3_2:65996828-65996847 | None:intergenic | 20.0% |
| !!! | ATGTTTTTCTCTGTTTAAAA+TGG | + | chr3_2:65996880-65996899 | Msa0418300:intron | 20.0% |
| !! | AAATATTGTCAAAGTAAGTT+AGG | + | chr3_2:65997274-65997293 | Msa0418300:intron | 20.0% |
| !! | GATAAAGAAGAAAGAAAAAA+AGG | - | chr3_2:65997435-65997454 | None:intergenic | 20.0% |
| !!! | AATTTTGCGATAATTTTTTG+CGG | - | chr3_2:65997722-65997741 | None:intergenic | 20.0% |
| !! | TAGTATAATTAGAACTTGTA+AGG | - | chr3_2:65998239-65998258 | None:intergenic | 20.0% |
| !! | CCCTAAAATAAATTTAAACA+AGG | - | chr3_2:65998280-65998299 | None:intergenic | 20.0% |
| !! | AAGAGTTATTATGAGTATTA+GGG | - | chr3_2:65998431-65998450 | None:intergenic | 20.0% |
| !! | AAAGAGTTATTATGAGTATT+AGG | - | chr3_2:65998432-65998451 | None:intergenic | 20.0% |
| !! | ATAATAAGTAAGTCTATTGA+AGG | + | chr3_2:65998503-65998522 | Msa0418300:intron | 20.0% |
| !!! | TTTGAAATTTTGATACATTG+AGG | + | chr3_2:65998603-65998622 | Msa0418300:intron | 20.0% |
| !!! | TTGAAATTTTGATACATTGA+GGG | + | chr3_2:65998604-65998623 | Msa0418300:intron | 20.0% |
| !! | TGAAATAGGATAAAATAAAG+GGG | - | chr3_2:65998677-65998696 | None:intergenic | 20.0% |
| !! | TCATTTCATAAGATTGAAAT+AGG | - | chr3_2:65998691-65998710 | None:intergenic | 20.0% |
| !! | ATCTTATGAAATGAAATATC+AGG | + | chr3_2:65998697-65998716 | Msa0418300:intron | 20.0% |
| !! | GATAAATTAAATTTCTTCCT+AGG | - | chr3_2:65998746-65998765 | None:intergenic | 20.0% |
| !! | AGTAAAAATTAGAAGTTCTT+GGG | - | chr3_2:65999047-65999066 | None:intergenic | 20.0% |
| !! | AAGTAAAAATTAGAAGTTCT+TGG | - | chr3_2:65999048-65999067 | None:intergenic | 20.0% |
| !! | TTACTTGTATTTCATAAATG+GGG | + | chr3_2:65999062-65999081 | Msa0418300:intron | 20.0% |
| !! | TCAAAGATCTTAATTACAAT+AGG | + | chr3_2:65999822-65999841 | Msa0418300:intron | 20.0% |
| !!! | CATTTACTTGCTAAAAATTA+CGG | + | chr3_2:66000120-66000139 | Msa0418300:intron | 20.0% |
| !! | AAAAAAGGAAAAATGTTAAC+CGG | - | chr3_2:66000545-66000564 | None:intergenic | 20.0% |
| !!! | TTTTTGGTTACAAAAAGTTT+AGG | + | chr3_2:66000595-66000614 | Msa0418300:intron | 20.0% |
| !! | GCGTTTAACATAAATTAAAA+CGG | + | chr3_2:66000724-66000743 | Msa0418300:intron | 20.0% |
| !!! | TTTTTGGTTACAAAAAGTTT+AGG | + | chr3_2:66000595-66000614 | Msa0418300:intron | 20.0% |
| !!! | AAGTATTTTGTATTTGTAAG+AGG | - | chr3_2:66001473-66001492 | None:intergenic | 20.0% |
| !!! | TAGCTTTTTTATTTGATCAT+TGG | - | chr3_2:66001860-66001879 | None:intergenic | 20.0% |
| !! | TTGCAAAATTTGCTTACATT+TGG | + | chr3_2:65996030-65996049 | Msa0418300:CDS | 25.0% |
| !! | TGCAAAATTTGCTTACATTT+GGG | + | chr3_2:65996031-65996050 | Msa0418300:CDS | 25.0% |
| ! | TTTCAATCTATGTTTGTTTG+TGG | + | chr3_2:65996661-65996680 | Msa0418300:intron | 25.0% |
| ! | TTCAATCTATGTTTGTTTGT+GGG | + | chr3_2:65996662-65996681 | Msa0418300:intron | 25.0% |
| !! | GATAAAGATGAACATAGTTT+TGG | + | chr3_2:65996693-65996712 | Msa0418300:intron | 25.0% |
| !! | AAGTGTTGTTAATAAAGCAT+TGG | - | chr3_2:65996748-65996767 | None:intergenic | 25.0% |
| !! | ATTGGTTCTTAATTACTGTT+TGG | + | chr3_2:65996782-65996801 | Msa0418300:intron | 25.0% |
| ! | AATAAGAAATTATCACCACT+TGG | + | chr3_2:65996936-65996955 | Msa0418300:intron | 25.0% |
| ! | AAAATTCATCTTCTCTTTCA+AGG | + | chr3_2:65996972-65996991 | Msa0418300:intron | 25.0% |
| ! | TGTTAAATATTATGGGACTT+AGG | - | chr3_2:65997076-65997095 | None:intergenic | 25.0% |
| ! | TCGACTGTGTTAAATATTAT+GGG | - | chr3_2:65997083-65997102 | None:intergenic | 25.0% |
| ! | TAATAGGATAGATTGAATCA+CGG | + | chr3_2:65997350-65997369 | Msa0418300:intron | 25.0% |
| ! | AGGGCAAAAAAACAAAATTA+GGG | - | chr3_2:65997594-65997613 | None:intergenic | 25.0% |
| !!! | TAATCAAACTTTGTTTTAGC+AGG | + | chr3_2:65997916-65997935 | Msa0418300:intron | 25.0% |
| !!! | AATCAAACTTTGTTTTAGCA+GGG | + | chr3_2:65997917-65997936 | Msa0418300:intron | 25.0% |
| ! | AAGTAAAGACTAAACTTACA+AGG | + | chr3_2:65997993-65998012 | Msa0418300:intron | 25.0% |
| !!! | ACCATTTTCTTTTTTTTGGA+GGG | - | chr3_2:65998102-65998121 | None:intergenic | 25.0% |
| !!! | TACCATTTTCTTTTTTTTGG+AGG | - | chr3_2:65998103-65998122 | None:intergenic | 25.0% |
| ! | AGAGTTATTATGAGTATTAG+GGG | - | chr3_2:65998430-65998449 | None:intergenic | 25.0% |
| ! | ACAATAAGTAAGTACGTATA+AGG | + | chr3_2:65998471-65998490 | Msa0418300:intron | 25.0% |
| !!! | TAGCACTTTTTTAAATTCCT+AGG | + | chr3_2:65998726-65998745 | Msa0418300:intron | 25.0% |
| ! | AGAAAAGATAATCATGCAAA+TGG | - | chr3_2:65998920-65998939 | None:intergenic | 25.0% |
| !!! | TTTTTTTAAGTCTCACAGTT+AGG | + | chr3_2:65998985-65999004 | Msa0418300:intron | 25.0% |
| ! | TACTTGTATTTCATAAATGG+GGG | + | chr3_2:65999063-65999082 | Msa0418300:intron | 25.0% |
| ! | TCAATGACTAAATTGACTAA+TGG | + | chr3_2:65999222-65999241 | Msa0418300:intron | 25.0% |
| ! | GTGCAATTAATATTCTATTG+TGG | - | chr3_2:65999489-65999508 | None:intergenic | 25.0% |
| ! | TGCACAATTAATTGGAATTA+AGG | + | chr3_2:65999504-65999523 | Msa0418300:intron | 25.0% |
| !!! | TTTTTTTCTTTCTCTCTAGT+TGG | - | chr3_2:65999564-65999583 | None:intergenic | 25.0% |
| ! | CTTATACTTTCACAAATAAG+AGG | + | chr3_2:65999620-65999639 | Msa0418300:intron | 25.0% |
| !! | AGAATTAGAGTTTTCAATTC+AGG | + | chr3_2:65999700-65999719 | Msa0418300:intron | 25.0% |
| !! | ACATAGCTTTACTAAAACAT+TGG | + | chr3_2:65999784-65999803 | Msa0418300:intron | 25.0% |
| !! | CATAGCTTTACTAAAACATT+GGG | + | chr3_2:65999785-65999804 | Msa0418300:intron | 25.0% |
| ! | ACTAGATAACAACCTATAAT+GGG | - | chr3_2:65999903-65999922 | None:intergenic | 25.0% |
| !! | AAAATGGATACATGACATTT+TGG | - | chr3_2:65999986-66000005 | None:intergenic | 25.0% |
| !! | TTAATTGAAACAGAGGATTT+TGG | + | chr3_2:66000172-66000191 | Msa0418300:intron | 25.0% |
| !!! | TAGATTTTTTTTTTCCCTTG+AGG | - | chr3_2:66000284-66000303 | None:intergenic | 25.0% |
| !!! | AATACTTTGAAATAGTAAGC+TGG | + | chr3_2:66000334-66000353 | Msa0418300:intron | 25.0% |
| !!! | AACGGTTCATTCTTTTTTTT+TGG | + | chr3_2:66000579-66000598 | Msa0418300:intron | 25.0% |
| !!! | AACGGTTCATTCTTTTTTTT+TGG | + | chr3_2:66000579-66000598 | Msa0418300:intron | 25.0% |
| !!! | ATTCTAGTTTGCTTACTTTT+TGG | - | chr3_2:66000988-66001007 | None:intergenic | 25.0% |
| !!! | CTTTGATTTCTTTTGCTTTA+TGG | - | chr3_2:66001012-66001031 | None:intergenic | 25.0% |
| ! | TAAAGCAAAAGAAATCAAAG+AGG | + | chr3_2:66001012-66001031 | Msa0418300:intron | 25.0% |
| !!! | GTTGCTTTTTCTAAATTCTT+AGG | - | chr3_2:66001208-66001227 | None:intergenic | 25.0% |
| ! | AAAGTTGTAAAGAAAATGCA+AGG | - | chr3_2:66001361-66001380 | None:intergenic | 25.0% |
| ! | ATGAAATGAAATTGAGGTTA+TGG | - | chr3_2:66001423-66001442 | None:intergenic | 25.0% |
| ! | GTGTAAATGAAATGAAATTG+AGG | - | chr3_2:66001429-66001448 | None:intergenic | 25.0% |
| ! | TATTTGTAAGAGGAAACAAA+AGG | - | chr3_2:66001463-66001482 | None:intergenic | 25.0% |
| !!! | GGTATTGGAATTTTAATTGT+TGG | - | chr3_2:66001585-66001604 | None:intergenic | 25.0% |
| ! | TTAAAATTCCAATACCACAA+AGG | + | chr3_2:66001589-66001608 | Msa0418300:CDS | 25.0% |
| ! | AAATTTGCTTACATTTGGGT+TGG | + | chr3_2:65996035-65996054 | Msa0418300:CDS | 30.0% |
| TGATGGAATGGTGATAAATT+TGG | + | chr3_2:65996163-65996182 | Msa0418300:CDS | 30.0% | |
| GAAAGTAACCATTTCCAAAA+GGG | - | chr3_2:65996217-65996236 | None:intergenic | 30.0% | |
| TGAAAGTAACCATTTCCAAA+AGG | - | chr3_2:65996218-65996237 | None:intergenic | 30.0% | |
| ! | TTTGGAAATGGTTACTTTCA+AGG | + | chr3_2:65996218-65996237 | Msa0418300:intron | 30.0% |
| TTGCAATGTTCTTCAAACAA+GGG | - | chr3_2:65996432-65996451 | None:intergenic | 30.0% | |
| ATTGCAATGTTCTTCAAACA+AGG | - | chr3_2:65996433-65996452 | None:intergenic | 30.0% | |
| TCAATCTATGTTTGTTTGTG+GGG | + | chr3_2:65996663-65996682 | Msa0418300:intron | 30.0% | |
| CTAACAATACATCATCATGA+AGG | - | chr3_2:65997014-65997033 | None:intergenic | 30.0% | |
| GTCGACTGTGTTAAATATTA+TGG | - | chr3_2:65997084-65997103 | None:intergenic | 30.0% | |
| !! | TACAAGGTCGCTATTTTATA+GGG | - | chr3_2:65998009-65998028 | None:intergenic | 30.0% |
| !! | TTACAAGGTCGCTATTTTAT+AGG | - | chr3_2:65998008-65998027 | None:intergenic | 30.0% |
| AAGTAAGGACTAAACTTACA+AGG | - | chr3_2:65997550-65997569 | None:intergenic | 30.0% | |
| CAGGGCAAAAAAACAAAATT+AGG | - | chr3_2:65997595-65997614 | None:intergenic | 30.0% | |
| CAAGATTAGAACACTATGAA+AGG | - | chr3_2:65997854-65997873 | None:intergenic | 30.0% | |
| !! | TTACAAGGTCGCTATTTTAT+AGG | + | chr3_2:65998008-65998027 | Msa0418300:intron | 30.0% |
| !! | TACAAGGTCGCTATTTTATA+GGG | + | chr3_2:65998009-65998028 | Msa0418300:intron | 30.0% |
| ! | AAGAAGGCACATAAAAAACA+TGG | + | chr3_2:65998071-65998090 | Msa0418300:intron | 30.0% |
| TCCCTCCAAAAAAAAGAAAA+TGG | + | chr3_2:65998098-65998117 | Msa0418300:intron | 30.0% | |
| !!! | ACTCTCACGTTGATTTTTTA+GGG | - | chr3_2:65998166-65998185 | None:intergenic | 30.0% |
| !!! | AACTCTCACGTTGATTTTTT+AGG | - | chr3_2:65998167-65998186 | None:intergenic | 30.0% |
| !!! | GACTATTTTGACTAACAAAG+TGG | - | chr3_2:65998390-65998409 | None:intergenic | 30.0% |
| AGGGGATTATTTAAGTGTTA+GGG | - | chr3_2:65998412-65998431 | None:intergenic | 30.0% | |
| TAGGGGATTATTTAAGTGTT+AGG | - | chr3_2:65998413-65998432 | None:intergenic | 30.0% | |
| ACTAACAAAATGCACATTCA+GGG | + | chr3_2:65998575-65998594 | Msa0418300:intron | 30.0% | |
| ! | AATATTGTGAGATGGACTTT+AGG | - | chr3_2:65998794-65998813 | None:intergenic | 30.0% |
| TACTTCGAAATATTGTGAGA+TGG | - | chr3_2:65998802-65998821 | None:intergenic | 30.0% | |
| ! | TGCAAATGGTATTTCTGAAA+AGG | - | chr3_2:65998906-65998925 | None:intergenic | 30.0% |
| ACTTGTATTTCATAAATGGG+GGG | + | chr3_2:65999064-65999083 | Msa0418300:intron | 30.0% | |
| TTGCAATTTATCTGCATTCA+GGG | + | chr3_2:65999298-65999317 | Msa0418300:intron | 30.0% | |
| TTATTAAGTCGAACAAATCC+AGG | + | chr3_2:65999435-65999454 | Msa0418300:intron | 30.0% | |
| TATTGAAAATATCATGGACC+TGG | - | chr3_2:65999456-65999475 | None:intergenic | 30.0% | |
| ! | AACTCTAATTCTTTTCCTGA+AGG | - | chr3_2:65999692-65999711 | None:intergenic | 30.0% |
| ! | TAATGGGTGTATTTAGTAGT+AGG | - | chr3_2:65999887-65999906 | None:intergenic | 30.0% |
| CTACTAAATACACCCATTAT+AGG | + | chr3_2:65999888-65999907 | Msa0418300:intron | 30.0% | |
| GACTAGATAACAACCTATAA+TGG | - | chr3_2:65999904-65999923 | None:intergenic | 30.0% | |
| !!! | TTTTGGCTTTGCTTATAGTT+AGG | - | chr3_2:65999969-65999988 | None:intergenic | 30.0% |
| TGAGTGATTAATTGAAACAG+AGG | + | chr3_2:66000165-66000184 | Msa0418300:intron | 30.0% | |
| CTATGAGTAAATTTCATGAC+TGG | - | chr3_2:66000412-66000431 | None:intergenic | 30.0% | |
| TATTACTAGCTATGTCAAGA+AGG | + | chr3_2:66000442-66000461 | Msa0418300:intron | 30.0% | |
| TTGGTTACAAAAAGTTTAGG+TGG | + | chr3_2:66000598-66000617 | Msa0418300:intron | 30.0% | |
| ! | ACAAAAAGTTTAGGTGGATT+CGG | + | chr3_2:66000604-66000623 | Msa0418300:intron | 30.0% |
| TTGGTTACAAAAAGTTTAGG+TGG | + | chr3_2:66000598-66000617 | Msa0418300:intron | 30.0% | |
| ! | ACAAAAAGTTTAGGTGGATT+CGG | + | chr3_2:66000604-66000623 | Msa0418300:intron | 30.0% |
| !! | GTATCAACCGTGTTATTTAT+TGG | - | chr3_2:66001162-66001181 | None:intergenic | 30.0% |
| TCTAAATTCTTAGGATTGTG+CGG | - | chr3_2:66001199-66001218 | None:intergenic | 30.0% | |
| TGAAGAAGTCAAATTAAGTG+GGG | - | chr3_2:66001281-66001300 | None:intergenic | 30.0% | |
| CTGAAGAAGTCAAATTAAGT+GGG | - | chr3_2:66001282-66001301 | None:intergenic | 30.0% | |
| TCTGAAGAAGTCAAATTAAG+TGG | - | chr3_2:66001283-66001302 | None:intergenic | 30.0% | |
| AAAGAAAATGCAAGGAAAGT+AGG | - | chr3_2:66001353-66001372 | None:intergenic | 30.0% | |
| AAATCTCCATCAATCTCATA+TGG | + | chr3_2:66001629-66001648 | Msa0418300:CDS | 30.0% | |
| GGAAATTGAAGTGATGAAAT+CGG | - | chr3_2:66001692-66001711 | None:intergenic | 30.0% | |
| AATAAAAAAGCTAGCATCCA+AGG | + | chr3_2:66001867-66001886 | Msa0418300:CDS | 30.0% | |
| ATAAAAAAGCTAGCATCCAA+GGG | + | chr3_2:66001868-66001887 | Msa0418300:CDS | 30.0% | |
| CCATTTCACCAACCAATTTA+CGG | + | chr3_2:65996095-65996114 | Msa0418300:CDS | 35.0% | |
| !!! | AATTTGGCTAGTCTTTTAGC+TGG | + | chr3_2:65996179-65996198 | Msa0418300:CDS | 35.0% |
| !! | TTGCTTGTTGATTCTACTAC+TGG | + | chr3_2:65996323-65996342 | Msa0418300:CDS | 35.0% |
| TTCAATGCTCATGGTGATAA+TGG | + | chr3_2:65996353-65996372 | Msa0418300:intron | 35.0% | |
| GTTGAGCAAGATAATGTAGA+AGG | - | chr3_2:65996410-65996429 | None:intergenic | 35.0% | |
| ! | TTGCAATAGTTACTTTCCAC+TGG | + | chr3_2:65996446-65996465 | Msa0418300:intron | 35.0% |
| ! | AGCATTGAGGATTCTAGATT+GGG | + | chr3_2:65996721-65996740 | Msa0418300:intron | 35.0% |
| !! | ACTTGTCGAGTTTCTAGTAT+TGG | + | chr3_2:65996764-65996783 | Msa0418300:intron | 35.0% |
| TAATTACTGTTTGGTCCAAG+TGG | + | chr3_2:65996791-65996810 | Msa0418300:intron | 35.0% | |
| AATTACTGTTTGGTCCAAGT+GGG | + | chr3_2:65996792-65996811 | Msa0418300:intron | 35.0% | |
| ! | ATGCATTGACATGCGTAATA+AGG | - | chr3_2:65997106-65997125 | None:intergenic | 35.0% |
| ACTCATCGAGACAAATCTAA+CGG | + | chr3_2:65997193-65997212 | Msa0418300:intron | 35.0% | |
| TCAAGAATATTGTCCCGAAA+GGG | - | chr3_2:65997398-65997417 | None:intergenic | 35.0% | |
| ATCAAGAATATTGTCCCGAA+AGG | - | chr3_2:65997399-65997418 | None:intergenic | 35.0% | |
| ! | CTAGAGTATTATTCACTCGA+TGG | - | chr3_2:65997457-65997476 | None:intergenic | 35.0% |
| TGAGTAGTGACTAATACTCA+GGG | - | chr3_2:65997613-65997632 | None:intergenic | 35.0% | |
| TTGAGTAGTGACTAATACTC+AGG | - | chr3_2:65997614-65997633 | None:intergenic | 35.0% | |
| !!! | TTTGCGATAATTTTTTGCGG+AGG | - | chr3_2:65997719-65997738 | None:intergenic | 35.0% |
| TGTTGCTCATGACTTTGTAA+CGG | - | chr3_2:65998134-65998153 | None:intergenic | 35.0% | |
| TTTAGGGGTAATAGTCACTT+TGG | + | chr3_2:65998293-65998312 | Msa0418300:intron | 35.0% | |
| ACTAACAAAGTGGACAATCA+GGG | - | chr3_2:65998380-65998399 | None:intergenic | 35.0% | |
| GACTAACAAAATGCACATTC+AGG | + | chr3_2:65998574-65998593 | Msa0418300:intron | 35.0% | |
| TCTGATTAAGATCGATCGAA+AGG | - | chr3_2:65999021-65999040 | None:intergenic | 35.0% | |
| CTTTAGTCCCTGAATAGAAA+AGG | + | chr3_2:65999095-65999114 | Msa0418300:intron | 35.0% | |
| ! | GACTACTCCTTTTCTATTCA+GGG | - | chr3_2:65999105-65999124 | None:intergenic | 35.0% |
| ! | TGACTACTCCTTTTCTATTC+AGG | - | chr3_2:65999106-65999125 | None:intergenic | 35.0% |
| TTGCAATTTCTCTGCATTCA+GGG | - | chr3_2:65999136-65999155 | None:intergenic | 35.0% | |
| TTTGCAATTTCTCTGCATTC+AGG | - | chr3_2:65999137-65999156 | None:intergenic | 35.0% | |
| AGACTCTCTTGGTTAATTTC+AGG | + | chr3_2:65999172-65999191 | Msa0418300:intron | 35.0% | |
| GACTCTCTTGGTTAATTTCA+GGG | + | chr3_2:65999173-65999192 | Msa0418300:intron | 35.0% | |
| TACTAACAGAGTCTACATTC+AGG | + | chr3_2:65999268-65999287 | Msa0418300:intron | 35.0% | |
| ACTAACAGAGTCTACATTCA+GGG | + | chr3_2:65999269-65999288 | Msa0418300:intron | 35.0% | |
| CTTGCAATTTATCTGCATTC+AGG | + | chr3_2:65999297-65999316 | Msa0418300:intron | 35.0% | |
| AAGTCGGACACATTTATGAA+GGG | - | chr3_2:65999372-65999391 | None:intergenic | 35.0% | |
| AAAGTCGGACACATTTATGA+AGG | - | chr3_2:65999373-65999392 | None:intergenic | 35.0% | |
| GAATACATACGATCACATGT+TGG | - | chr3_2:65999409-65999428 | None:intergenic | 35.0% | |
| ! | TTTTCTTTCTCTCTAGTTGG+TGG | - | chr3_2:65999561-65999580 | None:intergenic | 35.0% |
| GACCAACATGATCATGATAT+TGG | + | chr3_2:65999647-65999666 | Msa0418300:intron | 35.0% | |
| CTCCAATATCATGATCATGT+TGG | - | chr3_2:65999652-65999671 | None:intergenic | 35.0% | |
| AGCTGTTGGATAAGGATTAA+AGG | + | chr3_2:65999943-65999962 | Msa0418300:intron | 35.0% | |
| CTTGCTAAAAATTACGGATG+TGG | + | chr3_2:66000126-66000145 | Msa0418300:intron | 35.0% | |
| GGTGACAACAATAACTGAAT+AGG | + | chr3_2:66000193-66000212 | Msa0418300:intron | 35.0% | |
| TGGGACGAAGTTTATTAAAC+CGG | - | chr3_2:66000478-66000497 | None:intergenic | 35.0% | |
| !!! | AGGGCTTTTTTTTTTAGCAC+CGG | + | chr3_2:66000523-66000542 | Msa0418300:intron | 35.0% |
| TAGTAGAATGAAACACACGT+TGG | - | chr3_2:66000947-66000966 | None:intergenic | 35.0% | |
| TTTGCAATTAGCTGGCTATA+TGG | + | chr3_2:66001098-66001117 | Msa0418300:intron | 35.0% | |
| ! | TTATGCACTCTCTTCCTTTT+AGG | + | chr3_2:66001318-66001337 | Msa0418300:intron | 35.0% |
| GATGGTATTTATAGGGGATT+TGG | - | chr3_2:66001384-66001403 | None:intergenic | 35.0% | |
| !! | GTGGTTGATGGTATTTATAG+GGG | - | chr3_2:66001390-66001409 | None:intergenic | 35.0% |
| !! | CGTGGTTGATGGTATTTATA+GGG | - | chr3_2:66001391-66001410 | None:intergenic | 35.0% |
| !! | ACGTGGTTGATGGTATTTAT+AGG | - | chr3_2:66001392-66001411 | None:intergenic | 35.0% |
| AGGTTATGGAAAAAGAAACG+TGG | - | chr3_2:66001409-66001428 | None:intergenic | 35.0% | |
| GTAGAGAAATGAAGAGGAAT+AGG | - | chr3_2:66001522-66001541 | None:intergenic | 35.0% | |
| AATGGAGTAGAGAAATGAAG+AGG | - | chr3_2:66001528-66001547 | None:intergenic | 35.0% | |
| ! | GAGATTGATGGAGATTTTTC+CGG | - | chr3_2:66001626-66001645 | None:intergenic | 35.0% |
| TCCATCAATCTCATATGGTA+CGG | + | chr3_2:66001634-66001653 | Msa0418300:CDS | 35.0% | |
| AGTGATGAAATCGGAGATTA+TGG | - | chr3_2:66001683-66001702 | None:intergenic | 35.0% | |
| CTTGACGAGAATTACTCATT+CGG | + | chr3_2:66001823-66001842 | Msa0418300:CDS | 35.0% | |
| ! | ACCATAAATTTGCTTACCTG+TGG | + | chr3_2:66001989-66002008 | Msa0418300:CDS | 35.0% |
| ! | CCATAAATTTGCTTACCTGT+GGG | + | chr3_2:66001990-66002009 | Msa0418300:CDS | 35.0% |
| !! | CCATAAATAGGTTGGTGAAA+GGG | - | chr3_2:66002057-66002076 | None:intergenic | 35.0% |
| CCTTTCACCAACCTATTTAT+GGG | + | chr3_2:66002055-66002074 | Msa0418300:CDS | 35.0% | |
| !! | TCGTTATTTGGTGCAACTAA+CGG | - | chr3_2:66002093-66002112 | None:intergenic | 35.0% |
| !! | GATTAACGTGGCTAGTTTAT+TGG | + | chr3_2:66002134-66002153 | Msa0418300:CDS | 35.0% |
| TGACGAATCCATTTGGAAAT+GGG | + | chr3_2:66002166-66002185 | Msa0418300:CDS | 35.0% | |
| TGATAGTACCCATTTCCAAA+TGG | - | chr3_2:66002177-66002196 | None:intergenic | 35.0% | |
| TTTGGAAATGGGTACTATCA+AGG | + | chr3_2:66002177-66002196 | Msa0418300:CDS | 35.0% | |
| ! | TTATAACTTGCACCACTTGT+TGG | - | chr3_2:66002297-66002316 | None:intergenic | 35.0% |
| ! | TTTTGCAACCTTACCTTTCC+TGG | - | chr3_2:65996018-65996037 | None:intergenic | 40.0% |
| !! | CCGTAAATTGGTTGGTGAAA+TGG | - | chr3_2:65996098-65996117 | None:intergenic | 40.0% |
| TTTGTGGACCGTAAATTGGT+TGG | - | chr3_2:65996106-65996125 | None:intergenic | 40.0% | |
| TCAAGTCCTACATCGTTGTT+TGG | - | chr3_2:65996146-65996165 | None:intergenic | 40.0% | |
| AACAACGATGTAGGACTTGA+TGG | + | chr3_2:65996146-65996165 | Msa0418300:CDS | 40.0% | |
| !! | GCAACAAACCCTTTTGGAAA+TGG | + | chr3_2:65996206-65996225 | Msa0418300:CDS | 40.0% |
| TGTCCTGGTGTTTATGGTAA+AGG | + | chr3_2:65996275-65996294 | Msa0418300:CDS | 40.0% | |
| GTAGAAGGATCATACAAAGC+AGG | - | chr3_2:65996395-65996414 | None:intergenic | 40.0% | |
| TATGTTTGTTTGTGGGGTTG+AGG | + | chr3_2:65996669-65996688 | Msa0418300:intron | 40.0% | |
| ATGTTTGTTTGTGGGGTTGA+GGG | + | chr3_2:65996670-65996689 | Msa0418300:intron | 40.0% | |
| !! | GAGCATTGAGGATTCTAGAT+TGG | + | chr3_2:65996720-65996739 | Msa0418300:intron | 40.0% |
| TAGGTATTCCAATTCCCACT+TGG | - | chr3_2:65996809-65996828 | None:intergenic | 40.0% | |
| !! | GTGTTTTTGATGCCAAAGTG+AGG | + | chr3_2:65996902-65996921 | Msa0418300:intron | 40.0% |
| TTGATCACTACTTGTCCAAG+TGG | - | chr3_2:65996954-65996973 | None:intergenic | 40.0% | |
| TTCATCTTCTCTTTCAAGGC+AGG | + | chr3_2:65996976-65996995 | Msa0418300:intron | 40.0% | |
| TCATCTTCTCTTTCAAGGCA+GGG | + | chr3_2:65996977-65996996 | Msa0418300:intron | 40.0% | |
| TTCAAATGGTCATCTACTGC+CGG | + | chr3_2:65997312-65997331 | Msa0418300:intron | 40.0% | |
| ATTAACGTATTCCATCCGTC+CGG | - | chr3_2:65997334-65997353 | None:intergenic | 40.0% | |
| GACGGATGGAATACGTTAAT+AGG | + | chr3_2:65997334-65997353 | Msa0418300:intron | 40.0% | |
| CAAGAATATTGTCCCGAAAG+GGG | - | chr3_2:65997397-65997416 | None:intergenic | 40.0% | |
| ! | GACTACTTGCTACACATTCA+GGG | - | chr3_2:65998320-65998339 | None:intergenic | 40.0% |
| ! | TGACTACTTGCTACACATTC+AGG | - | chr3_2:65998321-65998340 | None:intergenic | 40.0% |
| GACTAACAAAGTGGACAATC+AGG | - | chr3_2:65998381-65998400 | None:intergenic | 40.0% | |
| TGACTATTCGTTCCTCATTC+AGG | + | chr3_2:65998634-65998653 | Msa0418300:intron | 40.0% | |
| GACTATTCGTTCCTCATTCA+GGG | + | chr3_2:65998635-65998654 | Msa0418300:intron | 40.0% | |
| ACCAAGAGAGTCTACATTCA+GGG | - | chr3_2:65999165-65999184 | None:intergenic | 40.0% | |
| AACCAAGAGAGTCTACATTC+AGG | - | chr3_2:65999166-65999185 | None:intergenic | 40.0% | |
| TCAGGGACTAAAGTAGCTAA+CGG | + | chr3_2:65999190-65999209 | Msa0418300:intron | 40.0% | |
| ACTAATGGAGTCTGCATTCA+GGG | + | chr3_2:65999237-65999256 | Msa0418300:intron | 40.0% | |
| TGACGACTCATTTCCTATTC+AGG | + | chr3_2:65999328-65999347 | Msa0418300:intron | 40.0% | |
| GACGACTCATTTCCTATTCA+GGG | + | chr3_2:65999329-65999348 | Msa0418300:intron | 40.0% | |
| ! | AGTCACTTTAGTCCCTGAAT+AGG | - | chr3_2:65999090-65999109 | None:intergenic | 40.0% |
| GGTGGTTGTTAGATCAAAGT+CGG | - | chr3_2:65999388-65999407 | None:intergenic | 40.0% | |
| TACATACGATCACATGTTGG+TGG | - | chr3_2:65999406-65999425 | None:intergenic | 40.0% | |
| TGTAATCAATCAAGGTGTGG+CGG | - | chr3_2:65999538-65999557 | None:intergenic | 40.0% | |
| TGGTGTAATCAATCAAGGTG+TGG | - | chr3_2:65999541-65999560 | None:intergenic | 40.0% | |
| !! | GTTGGTGGTGTAATCAATCA+AGG | - | chr3_2:65999546-65999565 | None:intergenic | 40.0% |
| GTTGAACATGATTCTCCTTC+AGG | + | chr3_2:65999674-65999693 | Msa0418300:intron | 40.0% | |
| AACATTGGGATGTCTACTAG+AGG | + | chr3_2:65999799-65999818 | Msa0418300:intron | 40.0% | |
| ATCCTTATCCAACAGCTTCA+CGG | - | chr3_2:65999940-65999959 | None:intergenic | 40.0% | |
| TAGCCAGCTAATTGCAAACA+CGG | - | chr3_2:66001096-66001115 | None:intergenic | 40.0% | |
| ! | AAGGAAGAGAGTGCATAAGT+GGG | - | chr3_2:66001316-66001335 | None:intergenic | 40.0% |
| ! | AAAGGAAGAGAGTGCATAAG+TGG | - | chr3_2:66001317-66001336 | None:intergenic | 40.0% |
| GGAAAAAGAAACGTGGTTGA+TGG | - | chr3_2:66001402-66001421 | None:intergenic | 40.0% | |
| ! | AGATTTTTCCGGTGAGAAGA+GGG | - | chr3_2:66001615-66001634 | None:intergenic | 40.0% |
| ACCGTACCATATGAGATTGA+TGG | - | chr3_2:66001638-66001657 | None:intergenic | 40.0% | |
| CGAATGAGTAATTCTCGTCA+AGG | - | chr3_2:66001825-66001844 | None:intergenic | 40.0% | |
| CCCACAGGTAAGCAAATTTA+TGG | - | chr3_2:66001993-66002012 | None:intergenic | 40.0% | |
| ! | TAAATTTGCTTACCTGTGGG+TGG | + | chr3_2:66001993-66002012 | Msa0418300:CDS | 40.0% |
| ! | AAATTTGCTTACCTGTGGGT+GGG | + | chr3_2:66001994-66002013 | Msa0418300:CDS | 40.0% |
| AATTCAGAGACACAATGTCC+AGG | + | chr3_2:66002018-66002037 | Msa0418300:CDS | 40.0% | |
| CCCTTTCACCAACCTATTTA+TGG | + | chr3_2:66002054-66002073 | Msa0418300:CDS | 40.0% | |
| !! | CCCATAAATAGGTTGGTGAA+AGG | - | chr3_2:66002058-66002077 | None:intergenic | 40.0% |
| ! | TTTGAGGCCCATAAATAGGT+TGG | - | chr3_2:66002065-66002084 | None:intergenic | 40.0% |
| !! | TATTTGGTGCAACTAACGGT+GGG | - | chr3_2:66002089-66002108 | None:intergenic | 40.0% |
| !! | TTATTTGGTGCAACTAACGG+TGG | - | chr3_2:66002090-66002109 | None:intergenic | 40.0% |
| AGTTGCACCAAATAACGATG+TGG | + | chr3_2:66002095-66002114 | Msa0418300:CDS | 40.0% | |
| GTTGCACCAAATAACGATGT+GGG | + | chr3_2:66002096-66002115 | Msa0418300:CDS | 40.0% | |
| GTGACGAATCCATTTGGAAA+TGG | + | chr3_2:66002165-66002184 | Msa0418300:CDS | 40.0% | |
| GGTGCAAGTTATAACGCTAA+CGG | + | chr3_2:66002303-66002322 | Msa0418300:CDS | 40.0% | |
| TACTAGAGTAGAACAAACCG+AGG | - | chr3_2:66002376-66002395 | None:intergenic | 40.0% | |
| AACTCAGAAACACAGTGTCC+AGG | + | chr3_2:65996059-65996078 | Msa0418300:CDS | 45.0% | |
| ACTCAGAAACACAGTGTCCA+GGG | + | chr3_2:65996060-65996079 | Msa0418300:CDS | 45.0% | |
| !! | TCGTTGTTTGGTGCAACCAA+TGG | - | chr3_2:65996134-65996153 | None:intergenic | 45.0% |
| GTTGCACCAAACAACGATGT+AGG | + | chr3_2:65996137-65996156 | Msa0418300:CDS | 45.0% | |
| CGATGTAGGACTTGATGGAA+TGG | + | chr3_2:65996151-65996170 | Msa0418300:CDS | 45.0% | |
| ! | GGAACAGCAACAAACCCTTT+TGG | + | chr3_2:65996200-65996219 | Msa0418300:CDS | 45.0% |
| TCAGCTTGTCCTGGTGTTTA+TGG | + | chr3_2:65996269-65996288 | Msa0418300:CDS | 45.0% | |
| GCACCTTTACCATAAACACC+AGG | - | chr3_2:65996281-65996300 | None:intergenic | 45.0% | |
| !! | TATGGTAAAGGTGCTTACCC+TGG | + | chr3_2:65996287-65996306 | Msa0418300:CDS | 45.0% |
| GCAAATCACCAGCATAACCA+GGG | - | chr3_2:65996307-65996326 | None:intergenic | 45.0% | |
| AGCAAATCACCAGCATAACC+AGG | - | chr3_2:65996308-65996327 | None:intergenic | 45.0% | |
| ACATTCTTCTACACTGCCAG+TGG | - | chr3_2:65996465-65996484 | None:intergenic | 45.0% | |
| TGTTTGTTTGTGGGGTTGAG+GGG | + | chr3_2:65996671-65996690 | Msa0418300:intron | 45.0% | |
| !!! | AGTTTTGGGACAGAGCATTG+AGG | + | chr3_2:65996708-65996727 | Msa0418300:intron | 45.0% |
| TGTTTGGTCCAAGTGGGAAT+TGG | + | chr3_2:65996798-65996817 | Msa0418300:intron | 45.0% | |
| TGCTTCGAGATTCCTCACTT+TGG | - | chr3_2:65996917-65996936 | None:intergenic | 45.0% | |
| ATATCCCCTAACTCCCCTTT+CGG | + | chr3_2:65997381-65997400 | Msa0418300:intron | 45.0% | |
| TCCCTGAATGTAGACTCTCT+TGG | + | chr3_2:65999161-65999180 | Msa0418300:intron | 45.0% | |
| GACTAATGGAGTCTGCATTC+AGG | + | chr3_2:65999236-65999255 | Msa0418300:intron | 45.0% | |
| GTAATCAATCAAGGTGTGGC+GGG | - | chr3_2:65999537-65999556 | None:intergenic | 45.0% | |
| GATGTTCTGCTATCAGCTTG+AGG | + | chr3_2:65999754-65999773 | Msa0418300:intron | 45.0% | |
| TCCTTATCCAACAGCTTCAC+GGG | - | chr3_2:65999939-65999958 | None:intergenic | 45.0% | |
| ACTTTCACCATCCTTTCCCT+CGG | + | chr3_2:66000254-66000273 | Msa0418300:intron | 45.0% | |
| TTTCCCTCGGTTTACCTCAA+GGG | + | chr3_2:66000267-66000286 | Msa0418300:intron | 45.0% | |
| TTTCCCTTGAGGTAAACCGA+GGG | - | chr3_2:66000273-66000292 | None:intergenic | 45.0% | |
| ! | TTTTCCCTTGAGGTAAACCG+AGG | - | chr3_2:66000274-66000293 | None:intergenic | 45.0% |
| TCAAGAAGGAATCATGTCGC+CGG | + | chr3_2:66000456-66000475 | Msa0418300:intron | 45.0% | |
| TACCTCTACAAGTGCCCTTT+GGG | - | chr3_2:66000666-66000685 | None:intergenic | 45.0% | |
| TGTTAAACGCTGCCGATGTA+AGG | - | chr3_2:66000714-66000733 | None:intergenic | 45.0% | |
| TACCTCTACAAGTGCCCTTT+GGG | - | chr3_2:66000666-66000685 | None:intergenic | 45.0% | |
| ATCGAACACACAACCTTCTG+AGG | + | chr3_2:66000893-66000912 | Msa0418300:intron | 45.0% | |
| TCGAACACACAACCTTCTGA+GGG | + | chr3_2:66000894-66000913 | Msa0418300:intron | 45.0% | |
| !! | TTGGCTCAGTTGGTAAGGAA+CGG | - | chr3_2:66000928-66000947 | None:intergenic | 45.0% |
| CGGTCAATGTGTATGAGACA+AGG | - | chr3_2:66001076-66001095 | None:intergenic | 45.0% | |
| TGACCGTGTTTGCAATTAGC+TGG | + | chr3_2:66001090-66001109 | Msa0418300:intron | 45.0% | |
| AAGCAACGCGTTATCAAGCT+TGG | + | chr3_2:66001221-66001240 | Msa0418300:intron | 45.0% | |
| ! | TGCACTCTCTTCCTTTTAGG+AGG | + | chr3_2:66001321-66001340 | Msa0418300:intron | 45.0% |
| GTAGGAAAGAGCCTCCTAAA+AGG | - | chr3_2:66001335-66001354 | None:intergenic | 45.0% | |
| TTCTTGCTGCTGAGCTCAAA+TGG | - | chr3_2:66001546-66001565 | None:intergenic | 45.0% | |
| ! | GAGATTTTTCCGGTGAGAAG+AGG | - | chr3_2:66001616-66001635 | None:intergenic | 45.0% |
| ATCGGAGATTATGGCACGTT+GGG | - | chr3_2:66001674-66001693 | None:intergenic | 45.0% | |
| AATCGGAGATTATGGCACGT+TGG | - | chr3_2:66001675-66001694 | None:intergenic | 45.0% | |
| TAATTTCCACCACGTAGCGA+CGG | - | chr3_2:66001740-66001759 | None:intergenic | 45.0% | |
| ! | CGCTACGTGGTGGAAATTAA+CGG | + | chr3_2:66001741-66001760 | Msa0418300:CDS | 45.0% |
| AAAGACAAACGCCATCAACG+TGG | + | chr3_2:66001894-66001913 | Msa0418300:CDS | 45.0% | |
| CATCAACGTGGTTCTCACTT+CGG | + | chr3_2:66001906-66001925 | Msa0418300:CDS | 45.0% | |
| ! | GGTTTTGCTCCAGTAGATGT+GGG | + | chr3_2:66001947-66001966 | Msa0418300:CDS | 45.0% |
| TCAAGGCCCACATCGTTATT+TGG | - | chr3_2:66002105-66002124 | None:intergenic | 45.0% | |
| AATAACGATGTGGGCCTTGA+CGG | + | chr3_2:66002105-66002124 | Msa0418300:CDS | 45.0% | |
| !! | AACGTGGCTAGTTTATTGGC+TGG | + | chr3_2:66002138-66002157 | Msa0418300:CDS | 45.0% |
| !! | ACGTGGCTAGTTTATTGGCT+GGG | + | chr3_2:66002139-66002158 | Msa0418300:CDS | 45.0% |
| !! | CTTCAAGAGGTGCTTCTTTG+GGG | - | chr3_2:66002203-66002222 | None:intergenic | 45.0% |
| !! | GCTTCAAGAGGTGCTTCTTT+GGG | - | chr3_2:66002204-66002223 | None:intergenic | 45.0% |
| !! | AGCTTCAAGAGGTGCTTCTT+TGG | - | chr3_2:66002205-66002224 | None:intergenic | 45.0% |
| !! | AAAGAAGCACCTCTTGAAGC+TGG | + | chr3_2:66002204-66002223 | Msa0418300:CDS | 45.0% |
| TGTACTGGAGAGTTCGGTAA+AGG | + | chr3_2:66002234-66002253 | Msa0418300:CDS | 45.0% | |
| GTACTGGAGAGTTCGGTAAA+GGG | + | chr3_2:66002235-66002254 | Msa0418300:CDS | 45.0% | |
| TACTGGAGAGTTCGGTAAAG+GGG | + | chr3_2:66002236-66002255 | Msa0418300:CDS | 45.0% | |
| TATAACGCTAACGGCGTCAA+TGG | + | chr3_2:66002312-66002331 | Msa0418300:CDS | 45.0% | |
| TAGAACAAACCGAGGTTGTC+GGG | - | chr3_2:66002368-66002387 | None:intergenic | 45.0% | |
| GTAGAACAAACCGAGGTTGT+CGG | - | chr3_2:66002369-66002388 | None:intergenic | 45.0% | |
| !!! | TATAAGTAATTTTTTTTTAT+AGG | + | chr3_2:65997948-65997967 | Msa0418300:intron | 5.0% |
| !!! | ATAAGTAATTTTTTTTTATA+GGG | + | chr3_2:65997949-65997968 | Msa0418300:intron | 5.0% |
| !!! | TTTAATTTATGTTAAAAAAA+AGG | - | chr3_2:66000560-66000579 | None:intergenic | 5.0% |
| !!! | TTTTTTAACATAAATTAAAA+CGG | + | chr3_2:66000561-66000580 | Msa0418300:intron | 5.0% |
| AGTGTCCAGGGTTATGTGCT+TGG | + | chr3_2:65996072-65996091 | Msa0418300:CDS | 50.0% | |
| AATGGCCAAGCACATAACCC+TGG | - | chr3_2:65996080-65996099 | None:intergenic | 50.0% | |
| GCGCTTTGTGGACCGTAAAT+TGG | - | chr3_2:65996110-65996129 | None:intergenic | 50.0% | |
| !! | GCTTCAAGAGGTGCTTCAGA+AGG | - | chr3_2:65996245-65996264 | None:intergenic | 50.0% |
| CAAGCTGAAGCAGCTTCAAG+AGG | - | chr3_2:65996257-65996276 | None:intergenic | 50.0% | |
| ! | GGCGCTAGTTTCAATGCTCA+TGG | + | chr3_2:65996344-65996363 | Msa0418300:CDS | 50.0% |
| AATGGTCATCTACTGCCGGA+CGG | + | chr3_2:65997316-65997335 | Msa0418300:intron | 50.0% | |
| TATCCCCTAACTCCCCTTTC+GGG | + | chr3_2:65997382-65997401 | Msa0418300:intron | 50.0% | |
| TTGTCCCGAAAGGGGAGTTA+GGG | - | chr3_2:65997389-65997408 | None:intergenic | 50.0% | |
| ATTGTCCCGAAAGGGGAGTT+AGG | - | chr3_2:65997390-65997409 | None:intergenic | 50.0% | |
| ! | GTCGCTTTAGTCCCTGAATG+AGG | - | chr3_2:65998649-65998668 | None:intergenic | 50.0% |
| TAATGAGCCCGTGAAGCTGT+TGG | + | chr3_2:65999929-65999948 | Msa0418300:intron | 50.0% | |
| AGGTAAACCGAGGGAAAGGA+TGG | - | chr3_2:66000264-66000283 | None:intergenic | 50.0% | |
| CTTGAGGTAAACCGAGGGAA+AGG | - | chr3_2:66000268-66000287 | None:intergenic | 50.0% | |
| CTTTCCCTCGGTTTACCTCA+AGG | + | chr3_2:66000266-66000285 | Msa0418300:intron | 50.0% | |
| ! | AGTTTAGGTGGATTCGGCTC+CGG | + | chr3_2:66000610-66000629 | Msa0418300:intron | 50.0% |
| GTACCTCTACAAGTGCCCTT+TGG | - | chr3_2:66000667-66000686 | None:intergenic | 50.0% | |
| !! | GATGTAAGGACGGTGTTGGT+GGG | - | chr3_2:66000700-66000719 | None:intergenic | 50.0% |
| CACCAACACCGTCCTTACAT+CGG | + | chr3_2:66000699-66000718 | Msa0418300:intron | 50.0% | |
| AAACGCTGCCGATGTAAGGA+CGG | - | chr3_2:66000710-66000729 | None:intergenic | 50.0% | |
| ! | AGTTTAGGTGGATTCGGCTC+CGG | + | chr3_2:66000610-66000629 | Msa0418300:intron | 50.0% |
| GTACCTCTACAAGTGCCCTT+TGG | - | chr3_2:66000667-66000686 | None:intergenic | 50.0% | |
| !! | GATGTAAGGACGGTGTTGGT+GGG | - | chr3_2:66000700-66000719 | None:intergenic | 50.0% |
| CACCAACACCGTCCTTACAT+CGG | + | chr3_2:66000699-66000718 | Msa0418300:intron | 50.0% | |
| ! | CACAACCTTCTGAGGGAAAG+TGG | + | chr3_2:66000901-66000920 | Msa0418300:intron | 50.0% |
| !! | TGGCTCAGTTGGTAAGGAAC+GGG | - | chr3_2:66000927-66000946 | None:intergenic | 50.0% |
| !! | ACACGTTGGCTCAGTTGGTA+AGG | - | chr3_2:66000933-66000952 | None:intergenic | 50.0% |
| !! | GAAACACACGTTGGCTCAGT+TGG | - | chr3_2:66000938-66000957 | None:intergenic | 50.0% |
| CAACGCGTTATCAAGCTTGG+TGG | + | chr3_2:66001224-66001243 | Msa0418300:intron | 50.0% | |
| GAAGAGGGCCTTTGTGGTAT+TGG | - | chr3_2:66001600-66001619 | None:intergenic | 50.0% | |
| GAGATTATGGCACGTTGGGT+AGG | - | chr3_2:66001670-66001689 | None:intergenic | 50.0% | |
| !! | GGTTTTGTGAGTTGGCGAGA+TGG | - | chr3_2:66001777-66001796 | None:intergenic | 50.0% |
| !! | GAGCACGAGGTTTTGTGAGT+TGG | - | chr3_2:66001785-66001804 | None:intergenic | 50.0% |
| CAAAACCTCGTGCTCACAAG+AGG | + | chr3_2:66001790-66001809 | Msa0418300:CDS | 50.0% | |
| CGAAGTGAGAACCACGTTGA+TGG | - | chr3_2:66001908-66001927 | None:intergenic | 50.0% | |
| ! | GGGTTTTGCTCCAGTAGATG+TGG | + | chr3_2:66001946-66001965 | Msa0418300:CDS | 50.0% |
| TCCAGTAGATGTGGGACACA+CGG | + | chr3_2:66001955-66001974 | Msa0418300:CDS | 50.0% | |
| TCTCTGAATTACCCACCCAC+AGG | - | chr3_2:66002008-66002027 | None:intergenic | 50.0% | |
| AATGTCCAGGTCAATGCGCA+TGG | + | chr3_2:66002031-66002050 | Msa0418300:CDS | 50.0% | |
| !! | GGGCTTTGAGGCCCATAAAT+AGG | - | chr3_2:66002069-66002088 | None:intergenic | 50.0% |
| CGTTAATCACCATGCCGTCA+AGG | - | chr3_2:66002122-66002141 | None:intergenic | 50.0% | |
| TGACGGCATGGTGATTAACG+TGG | + | chr3_2:66002122-66002141 | Msa0418300:CDS | 50.0% | |
| !! | CGTGGCTAGTTTATTGGCTG+GGG | + | chr3_2:66002140-66002159 | Msa0418300:CDS | 50.0% |
| AGCACCTCTTGAAGCTGGTT+CGG | + | chr3_2:66002209-66002228 | Msa0418300:CDS | 50.0% | |
| ! | TCGGCTTGTACTGGAGAGTT+CGG | + | chr3_2:66002228-66002247 | Msa0418300:CDS | 50.0% |
| ! | CACTTGTTGGATCCACCAAG+AGG | - | chr3_2:66002284-66002303 | None:intergenic | 50.0% |
| ! | CTCTTGGTGGATCCAACAAG+TGG | + | chr3_2:66002282-66002301 | Msa0418300:CDS | 50.0% |
| ACTCTTTGACCCGACAACCT+CGG | + | chr3_2:66002356-66002375 | Msa0418300:CDS | 50.0% | |
| GCAACCAATGGTGCGCTTTG+TGG | - | chr3_2:65996122-65996141 | None:intergenic | 55.0% | |
| GAAGCTGCTTCAGCTTGTCC+TGG | + | chr3_2:65996260-65996279 | Msa0418300:CDS | 55.0% | |
| GGTGCTTACCCTGGTTATGC+TGG | + | chr3_2:65996296-65996315 | Msa0418300:CDS | 55.0% | |
| TGTCCCGAAAGGGGAGTTAG+GGG | - | chr3_2:65997388-65997407 | None:intergenic | 55.0% | |
| GCCCGTGAAGCTGTTGGATA+AGG | + | chr3_2:65999935-65999954 | Msa0418300:intron | 55.0% | |
| ! | CGATGTAAGGACGGTGTTGG+TGG | - | chr3_2:66000701-66000720 | None:intergenic | 55.0% |
| TGCCGATGTAAGGACGGTGT+TGG | - | chr3_2:66000704-66000723 | None:intergenic | 55.0% | |
| ! | CGATGTAAGGACGGTGTTGG+TGG | - | chr3_2:66000701-66000720 | None:intergenic | 55.0% |
| TGCCGATGTAAGGACGGTGT+TGG | - | chr3_2:66000704-66000723 | None:intergenic | 55.0% | |
| ! | CAAGCTTGGTGGTACCTCAC+TGG | + | chr3_2:66001235-66001254 | Msa0418300:intron | 55.0% |
| GACTAGAGAGTGAGCCAGTG+AGG | - | chr3_2:66001252-66001271 | None:intergenic | 55.0% | |
| CACAAAGGCCCTCTTCTCAC+CGG | + | chr3_2:66001604-66001623 | Msa0418300:CDS | 55.0% | |
| ! | GATGGCTGGGGTTTGATGGT+GGG | - | chr3_2:66001718-66001737 | None:intergenic | 55.0% |
| GTGAACCTCTTGTGAGCACG+AGG | - | chr3_2:66001798-66001817 | None:intergenic | 55.0% | |
| GGCGTTTGTCTTTGAGCCCT+TGG | - | chr3_2:66001887-66001906 | None:intergenic | 55.0% | |
| TCGGCTGACGTGGTAGTTGA+TGG | + | chr3_2:66001925-66001944 | Msa0418300:CDS | 55.0% | |
| CGGCTGACGTGGTAGTTGAT+GGG | + | chr3_2:66001926-66001945 | Msa0418300:CDS | 55.0% | |
| ACCGTGTGTCCCACATCTAC+TGG | - | chr3_2:66001959-66001978 | None:intergenic | 55.0% | |
| ! | GCAACTAACGGTGGGCTTTG+AGG | - | chr3_2:66002081-66002100 | None:intergenic | 55.0% |
| GGGGTCGTGACGAATCCATT+TGG | + | chr3_2:66002159-66002178 | Msa0418300:CDS | 55.0% | |
| CAAGCCGAACCAGCTTCAAG+AGG | - | chr3_2:66002216-66002235 | None:intergenic | 55.0% | |
| !! | GAAGCTGGTTCGGCTTGTAC+TGG | + | chr3_2:66002219-66002238 | Msa0418300:CDS | 55.0% |
| TTCGGTAAAGGGGCTTACCC+TGG | + | chr3_2:66002246-66002265 | Msa0418300:CDS | 55.0% | |
| ACGCTAACGGCGTCAATGGA+AGG | + | chr3_2:66002316-66002335 | Msa0418300:CDS | 55.0% | |
| ! | GTTGTCGGGTCAAAGAGTGC+GGG | - | chr3_2:66002354-66002373 | None:intergenic | 55.0% |
| GGTTGTCGGGTCAAAGAGTG+CGG | - | chr3_2:66002355-66002374 | None:intergenic | 55.0% | |
| CGGTCCACAAAGCGCACCAT+TGG | + | chr3_2:65996115-65996134 | Msa0418300:CDS | 60.0% | |
| GTCATCTACTGCCGGACGGA+TGG | + | chr3_2:65997320-65997339 | Msa0418300:intron | 60.0% | |
| !! | GGCCCAAAGGGCACTTGTAG+AGG | + | chr3_2:66000661-66000680 | Msa0418300:intron | 60.0% |
| !! | GGCCCAAAGGGCACTTGTAG+AGG | + | chr3_2:66000661-66000680 | Msa0418300:intron | 60.0% |
| CACCGTCCTTACATCGGCAG+CGG | + | chr3_2:66000705-66000724 | Msa0418300:intron | 60.0% | |
| ACCGTCCTTACATCGGCAGC+GGG | + | chr3_2:66000706-66000725 | Msa0418300:intron | 60.0% | |
| TCCCGCTGCCGATGTAAGGA+CGG | - | chr3_2:66000873-66000892 | None:intergenic | 60.0% | |
| CGATTCCCGCTGCCGATGTA+AGG | - | chr3_2:66000877-66000896 | None:intergenic | 60.0% | |
| ! | ACGGGCCACTTTCCCTCAGA+AGG | - | chr3_2:66000909-66000928 | None:intergenic | 60.0% |
| CGGTGAGAAGAGGGCCTTTG+TGG | - | chr3_2:66001606-66001625 | None:intergenic | 60.0% | |
| !! | CTGGGGTTTGATGGTGGGTG+AGG | - | chr3_2:66001713-66001732 | None:intergenic | 60.0% |
| GGATGGCTGGGGTTTGATGG+TGG | - | chr3_2:66001719-66001738 | None:intergenic | 60.0% | |
| GACGGATGGCTGGGGTTTGA+TGG | - | chr3_2:66001722-66001741 | None:intergenic | 60.0% | |
| TTCCACCACGTAGCGACGGA+TGG | - | chr3_2:66001736-66001755 | None:intergenic | 60.0% | |
| GGTTCTCACTTCGGCTGACG+TGG | + | chr3_2:66001915-66001934 | Msa0418300:CDS | 60.0% | |
| ! | AAGGGCCATGCGCATTGACC+TGG | - | chr3_2:66002039-66002058 | None:intergenic | 60.0% |
| AGAGGTTCCCAGCGTAGCCA+GGG | - | chr3_2:66002266-66002285 | None:intergenic | 60.0% | |
| AAGAGGTTCCCAGCGTAGCC+AGG | - | chr3_2:66002267-66002286 | None:intergenic | 60.0% | |
| TGGCTACGCTGGGAACCTCT+TGG | + | chr3_2:66002266-66002285 | Msa0418300:CDS | 60.0% | |
| CTACGCTGGGAACCTCTTGG+TGG | + | chr3_2:66002269-66002288 | Msa0418300:CDS | 60.0% | |
| ATTCGGCTCCGGTCACCACC+AGG | + | chr3_2:66000621-66000640 | Msa0418300:intron | 65.0% | |
| TTCGGCTCCGGTCACCACCA+GGG | + | chr3_2:66000622-66000641 | Msa0418300:intron | 65.0% | |
| TCCGGTCACCACCAGGGTCA+GGG | + | chr3_2:66000628-66000647 | Msa0418300:intron | 65.0% | |
| CAGGGTCAGGGCAGACCTCT+GGG | + | chr3_2:66000640-66000659 | Msa0418300:intron | 65.0% | |
| GGCAGACCTCTGGGCCCAAA+GGG | + | chr3_2:66000649-66000668 | Msa0418300:intron | 65.0% | |
| CAAGTGCCCTTTGGGCCCAG+AGG | - | chr3_2:66000658-66000677 | None:intergenic | 65.0% | |
| ATTCGGCTCCGGTCACCACC+AGG | + | chr3_2:66000621-66000640 | Msa0418300:intron | 65.0% | |
| TTCGGCTCCGGTCACCACCA+GGG | + | chr3_2:66000622-66000641 | Msa0418300:intron | 65.0% | |
| TCCGGTCACCACCAGGGTCA+GGG | + | chr3_2:66000628-66000647 | Msa0418300:intron | 65.0% | |
| CAGGGTCAGGGCAGACCTCT+GGG | + | chr3_2:66000640-66000659 | Msa0418300:intron | 65.0% | |
| GGCAGACCTCTGGGCCCAAA+GGG | + | chr3_2:66000649-66000668 | Msa0418300:intron | 65.0% | |
| CAAGTGCCCTTTGGGCCCAG+AGG | - | chr3_2:66000658-66000677 | None:intergenic | 65.0% | |
| CACGTAGCGACGGATGGCTG+GGG | - | chr3_2:66001730-66001749 | None:intergenic | 65.0% | |
| CCACGTAGCGACGGATGGCT+GGG | - | chr3_2:66001731-66001750 | None:intergenic | 65.0% | |
| ACCACGTAGCGACGGATGGC+TGG | - | chr3_2:66001732-66001751 | None:intergenic | 65.0% | |
| AGCCATCCGTCGCTACGTGG+TGG | + | chr3_2:66001731-66001750 | Msa0418300:CDS | 65.0% | |
| CGATGTGGGCCTTGACGGCA+TGG | + | chr3_2:66002110-66002129 | Msa0418300:CDS | 65.0% | |
| GGGCTTACCCTGGCTACGCT+GGG | + | chr3_2:66002256-66002275 | Msa0418300:CDS | 65.0% | |
| CTCCGGTCACCACCAGGGTC+AGG | + | chr3_2:66000627-66000646 | Msa0418300:intron | 70.0% | |
| ! | GCCCTGACCCTGGTGGTGAC+CGG | - | chr3_2:66000632-66000651 | None:intergenic | 70.0% |
| GAGGTCTGCCCTGACCCTGG+TGG | - | chr3_2:66000639-66000658 | None:intergenic | 70.0% | |
| CCAGAGGTCTGCCCTGACCC+TGG | - | chr3_2:66000642-66000661 | None:intergenic | 70.0% | |
| CCAGGGTCAGGGCAGACCTC+TGG | + | chr3_2:66000639-66000658 | Msa0418300:intron | 70.0% | |
| GGGCAGACCTCTGGGCCCAA+AGG | + | chr3_2:66000648-66000667 | Msa0418300:intron | 70.0% | |
| CTCCGGTCACCACCAGGGTC+AGG | + | chr3_2:66000627-66000646 | Msa0418300:intron | 70.0% | |
| ! | GCCCTGACCCTGGTGGTGAC+CGG | - | chr3_2:66000632-66000651 | None:intergenic | 70.0% |
| GAGGTCTGCCCTGACCCTGG+TGG | - | chr3_2:66000639-66000658 | None:intergenic | 70.0% | |
| CCAGAGGTCTGCCCTGACCC+TGG | - | chr3_2:66000642-66000661 | None:intergenic | 70.0% | |
| CCAGGGTCAGGGCAGACCTC+TGG | + | chr3_2:66000639-66000658 | Msa0418300:intron | 70.0% | |
| GGGCAGACCTCTGGGCCCAA+AGG | + | chr3_2:66000648-66000667 | Msa0418300:intron | 70.0% | |
| CCCAGCCATCCGTCGCTACG+TGG | + | chr3_2:66001728-66001747 | Msa0418300:CDS | 70.0% | |
| GGGGCTTACCCTGGCTACGC+TGG | + | chr3_2:66002255-66002274 | Msa0418300:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 65996008 | 66002398 | 65996008 | ID=Msa0418300;Name=Msa0418300 |
| chr3_2 | mRNA | 65996008 | 66002398 | 65996008 | ID=Msa0418300-mRNA-1;Parent=Msa0418300;Name=Msa0418300-mRNA-1;_AED=0.18;_eAED=0.18;_QI=0|0|0|1|0|0|3|0|429 |
| chr3_2 | exon | 65996008 | 65996227 | 65996008 | ID=Msa0418300-mRNA-1:exon:14957;Parent=Msa0418300-mRNA-1 |
| chr3_2 | exon | 65996240 | 65996365 | 65996240 | ID=Msa0418300-mRNA-1:exon:14958;Parent=Msa0418300-mRNA-1 |
| chr3_2 | exon | 66001455 | 66002398 | 66001455 | ID=Msa0418300-mRNA-1:exon:14959;Parent=Msa0418300-mRNA-1 |
| chr3_2 | CDS | 65996008 | 65996227 | 65996008 | ID=Msa0418300-mRNA-1:cds;Parent=Msa0418300-mRNA-1 |
| chr3_2 | CDS | 65996240 | 65996365 | 65996240 | ID=Msa0418300-mRNA-1:cds;Parent=Msa0418300-mRNA-1 |
| chr3_2 | CDS | 66001455 | 66002398 | 66001455 | ID=Msa0418300-mRNA-1:cds;Parent=Msa0418300-mRNA-1 |
| Gene Sequence |
| Protein sequence |
