AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0420830

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0420830 MtrunA17_Chr3g0120721 97.167 353 9 1 1 353 1 352 0.0 652
Msa0420830 MtrunA17_Chr6g0449481 65.534 206 68 2 11 216 38 240 5.57e-89 272
Msa0420830 MtrunA17_Chr2g0290191 38.683 243 113 6 17 239 3 229 8.09e-50 173
Msa0420830 MtrunA17_Chr3g0101061 36.103 349 182 12 18 336 40 377 8.12e-50 174
Msa0420830 MtrunA17_Chr5g0447761 38.776 294 153 10 18 288 6 295 8.13e-50 173
Msa0420830 MtrunA17_Chr1g0186351 36.508 189 101 2 18 188 6 193 1.27e-44 159
Msa0420830 MtrunA17_Chr3g0135111 35.106 188 102 2 18 186 10 196 4.17e-38 139
Msa0420830 MtrunA17_Chr5g0402191 32.143 168 112 1 19 186 5 170 5.50e-31 121
Msa0420830 MtrunA17_Chr8g0375101 29.762 168 116 1 19 186 5 170 7.31e-26 106
Msa0420830 MtrunA17_Chr4g0045921 31.304 230 129 9 19 226 77 299 4.00e-20 90.1
Msa0420830 MtrunA17_Chr4g0058151 27.684 177 120 3 19 187 123 299 3.27e-18 84.0
Msa0420830 MtrunA17_Chr4g0068631 29.752 242 129 9 9 226 71 295 1.99e-16 80.5
Msa0420830 MtrunA17_Chr2g0278661 37.500 88 52 1 98 185 2 86 3.66e-15 74.3
Msa0420830 MtrunA17_Chr4g0050781 36.585 82 52 0 107 188 8 89 4.04e-14 70.5
Msa0420830 MtrunA17_Chr3g0087481 25.000 184 121 3 13 182 55 235 9.55e-14 70.1
Msa0420830 MtrunA17_Chr1g0210241 39.286 84 49 1 14 95 3 86 1.44e-13 70.1
Msa0420830 MtrunA17_Chr7g0276201 29.050 179 113 6 19 192 105 274 4.17e-13 70.1
Msa0420830 MtrunA17_Chr7g0268551 25.738 237 140 10 19 236 17 236 1.26e-12 68.6
Msa0420830 MtrunA17_Chr4g0035051 58.000 50 21 0 19 68 9 58 5.00e-12 62.4
Msa0420830 MtrunA17_Chr4g0035001 49.153 59 30 0 19 77 7 65 1.04e-11 62.8
Msa0420830 MtrunA17_Chr3g0116631 23.333 180 127 3 18 186 109 288 1.10e-11 64.7
Msa0420830 MtrunA17_Chr8g0346011 40.909 66 39 0 19 84 38 103 1.22e-11 64.7
Msa0420830 MtrunA17_Chr7g0276531 42.188 64 37 0 19 82 19 82 1.40e-11 63.9
Msa0420830 MtrunA17_Chr4g0017401 40.909 66 39 0 19 84 17 82 1.41e-11 64.3
Msa0420830 MtrunA17_Chr3g0144311 37.879 66 41 0 19 84 30 95 1.74e-11 63.9
Msa0420830 MtrunA17_Chr4g0035031 45.000 60 33 0 19 78 9 68 1.94e-11 62.4
Msa0420830 MtrunA17_Chr4g0026301 26.923 156 96 7 9 161 107 247 2.04e-11 65.1
Msa0420830 MtrunA17_Chr5g0440831 25.000 160 112 2 19 170 166 325 2.92e-11 64.7
Msa0420830 MtrunA17_Chr1g0181111 25.888 197 114 4 19 186 85 278 3.98e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0420830 AT3G13224.2 59.189 370 122 10 1 353 1 358 3.53e-102 305
Msa0420830 AT3G13224.3 58.689 351 117 9 19 353 11 349 3.36e-95 287
Msa0420830 AT3G13224.1 71.739 184 49 2 1 181 1 184 5.05e-89 267
Msa0420830 AT5G40490.1 67.172 198 60 4 8 202 31 226 1.54e-81 254
Msa0420830 AT5G40490.2 65.027 183 60 3 22 202 29 209 8.33e-74 234
Msa0420830 AT1G17640.2 51.892 185 86 1 17 198 65 249 2.83e-66 214
Msa0420830 AT1G17640.1 51.892 185 86 1 17 198 65 249 2.83e-66 214
Msa0420830 AT1G17640.3 51.892 185 86 1 17 198 65 249 2.83e-66 214
Msa0420830 AT5G55550.5 40.239 251 118 5 18 246 6 246 2.45e-49 172
Msa0420830 AT5G55550.5 43.878 98 54 1 9 105 101 198 5.43e-19 88.2
Msa0420830 AT5G55550.4 40.239 251 118 5 18 246 6 246 2.45e-49 172
Msa0420830 AT5G55550.4 43.878 98 54 1 9 105 101 198 5.43e-19 88.2
Msa0420830 AT5G55550.9 40.239 251 118 5 18 246 6 246 2.45e-49 172
Msa0420830 AT5G55550.9 43.878 98 54 1 9 105 101 198 5.43e-19 88.2
Msa0420830 AT5G55550.7 40.239 251 118 5 18 246 6 246 2.45e-49 172
Msa0420830 AT5G55550.7 43.878 98 54 1 9 105 101 198 5.43e-19 88.2
Msa0420830 AT5G55550.1 40.239 251 118 5 18 246 6 246 2.45e-49 172
Msa0420830 AT5G55550.1 43.878 98 54 1 9 105 101 198 5.43e-19 88.2
Msa0420830 AT5G55550.2 38.112 286 142 7 18 280 6 279 4.31e-49 171
Msa0420830 AT5G55550.2 43.878 98 54 1 9 105 101 198 6.77e-19 87.8
Msa0420830 AT5G55550.3 38.112 286 142 7 18 280 6 279 4.31e-49 171
Msa0420830 AT5G55550.3 43.878 98 54 1 9 105 101 198 6.77e-19 87.8
Msa0420830 AT5G55550.6 38.112 286 142 7 18 280 6 279 4.31e-49 171
Msa0420830 AT5G55550.6 43.878 98 54 1 9 105 101 198 6.77e-19 87.8
Msa0420830 AT5G55550.11 38.112 286 142 7 18 280 6 279 4.31e-49 171
Msa0420830 AT5G55550.11 43.878 98 54 1 9 105 101 198 6.77e-19 87.8
Msa0420830 AT4G26650.2 40.933 193 94 2 18 191 12 203 1.30e-47 167
Msa0420830 AT4G26650.2 44.444 99 54 1 11 108 112 210 3.95e-19 88.6
Msa0420830 AT4G26650.1 40.933 193 94 2 18 191 15 206 1.60e-47 167
Msa0420830 AT4G26650.1 44.444 99 54 1 11 108 115 213 3.93e-19 88.6
Msa0420830 AT4G14300.1 40.107 187 95 2 18 188 6 191 5.19e-46 162
Msa0420830 AT4G14300.2 40.107 187 95 2 18 188 6 191 5.19e-46 162
Msa0420830 AT2G33410.1 40.642 187 94 3 18 188 6 191 5.19e-45 159
Msa0420830 AT2G33410.1 46.939 98 48 2 2 98 97 191 4.48e-19 88.2
Msa0420830 AT3G07810.2 35.938 256 139 6 18 256 6 253 6.10e-45 161
Msa0420830 AT3G07810.1 35.938 256 139 6 18 256 6 253 6.66e-45 160
Msa0420830 AT5G47620.1 37.255 255 132 8 19 251 7 255 1.21e-42 153
Msa0420830 AT5G47620.1 36.522 115 65 2 102 210 2 114 2.88e-13 70.9
Msa0420830 AT5G47620.2 37.255 255 132 8 19 251 7 255 1.21e-42 153
Msa0420830 AT5G47620.2 36.522 115 65 2 102 210 2 114 2.88e-13 70.9
Msa0420830 AT5G47620.5 37.255 255 132 8 19 251 7 255 1.21e-42 153
Msa0420830 AT5G47620.5 36.522 115 65 2 102 210 2 114 2.88e-13 70.9
Msa0420830 AT5G55550.8 33.033 333 141 8 18 280 6 326 1.79e-41 151
Msa0420830 AT5G55550.8 43.878 98 54 1 9 105 148 245 9.57e-19 87.8
Msa0420830 AT5G55550.10 33.033 333 141 8 18 280 6 326 2.89e-41 151
Msa0420830 AT5G55550.10 43.878 98 54 1 9 105 148 245 1.15e-18 87.4
Msa0420830 AT5G47620.4 34.296 277 132 9 19 251 7 277 9.84e-38 140
Msa0420830 AT1G58470.2 31.624 234 119 3 19 226 7 225 5.27e-34 129
Msa0420830 AT1G58470.2 35.185 108 68 1 102 209 2 107 4.20e-11 63.9
Msa0420830 AT1G58470.1 31.624 234 119 3 19 226 7 225 5.27e-34 129
Msa0420830 AT1G58470.1 35.185 108 68 1 102 209 2 107 4.20e-11 63.9
Msa0420830 AT4G36960.1 31.148 183 124 1 19 201 4 184 3.43e-31 121
Msa0420830 AT4G36960.2 31.148 183 124 1 19 201 4 184 3.43e-31 121
Msa0420830 AT5G47620.3 45.455 99 45 2 19 108 47 145 9.05e-20 89.7
Msa0420830 AT3G15010.1 30.952 168 111 2 19 182 76 242 4.61e-19 88.2
Msa0420830 AT3G15010.2 30.952 168 111 2 19 182 76 242 4.61e-19 88.2
Msa0420830 AT5G50250.1 27.011 174 121 2 18 185 113 286 3.54e-18 84.0
Msa0420830 AT4G24770.1 26.425 193 131 5 2 186 137 326 1.90e-17 82.4
Msa0420830 AT4G24770.2 26.425 193 131 5 2 186 137 326 1.90e-17 82.4
Msa0420830 AT4G00830.2 32.044 181 105 7 19 192 117 286 1.90e-17 84.0
Msa0420830 AT4G00830.2 24.597 248 150 9 18 255 196 416 5.55e-11 63.9
Msa0420830 AT4G00830.1 32.044 181 105 7 19 192 117 286 1.90e-17 84.0
Msa0420830 AT4G00830.1 24.597 248 150 9 18 255 196 416 5.55e-11 63.9
Msa0420830 AT4G00830.6 32.044 181 105 7 19 192 117 286 1.90e-17 84.0
Msa0420830 AT4G00830.6 24.597 248 150 9 18 255 196 416 5.55e-11 63.9
Msa0420830 AT4G00830.4 31.111 180 108 6 19 192 117 286 4.33e-17 82.8
Msa0420830 AT4G00830.4 24.597 248 150 9 18 255 196 416 4.35e-11 64.3
Msa0420830 AT3G52150.2 27.136 199 124 5 2 182 58 253 2.76e-15 75.1
Msa0420830 AT3G52150.1 27.136 199 124 5 2 182 58 253 2.76e-15 75.1
Msa0420830 AT3G26420.1 38.750 80 49 0 107 186 8 87 3.10e-15 74.7
Msa0420830 AT2G37220.1 25.521 192 118 2 19 185 92 283 4.34e-15 75.1
Msa0420830 AT5G04280.1 43.038 79 43 1 19 95 8 86 7.19e-15 74.7
Msa0420830 AT3G56860.9 26.685 356 201 12 19 343 141 467 2.71e-14 74.3
Msa0420830 AT3G56860.11 26.685 356 201 12 19 343 141 467 2.71e-14 74.3
Msa0420830 AT3G56860.8 26.685 356 201 12 19 343 141 467 2.71e-14 74.3
Msa0420830 AT3G56860.5 26.685 356 201 12 19 343 141 467 2.71e-14 74.3
Msa0420830 AT3G56860.7 26.685 356 201 12 19 343 141 467 2.71e-14 74.3
Msa0420830 AT3G56860.2 26.685 356 201 12 19 343 141 467 2.71e-14 74.3
Msa0420830 AT3G56860.6 26.685 356 201 12 19 343 141 467 2.71e-14 74.3
Msa0420830 AT3G56860.10 26.685 356 201 12 19 343 141 467 2.71e-14 74.3
Msa0420830 AT3G56860.3 26.685 356 201 12 19 343 141 467 2.71e-14 74.3
Msa0420830 AT3G56860.1 26.685 356 201 12 19 343 141 467 2.71e-14 74.3
Msa0420830 AT3G56860.4 26.685 356 201 12 19 343 141 467 2.71e-14 74.3
Msa0420830 AT4G00830.3 29.189 185 97 7 19 192 117 278 4.56e-14 73.6
Msa0420830 AT4G00830.5 29.189 185 97 7 19 192 117 278 4.56e-14 73.6
Msa0420830 AT1G03457.1 28.959 221 132 9 19 225 13 222 8.99e-14 72.4
Msa0420830 AT4G16280.2 27.907 301 166 13 13 295 115 382 1.11e-13 72.8
Msa0420830 AT4G16280.3 27.907 301 166 13 13 295 115 382 1.30e-13 72.4
Msa0420830 AT4G16280.4 27.907 301 166 13 13 295 40 307 1.31e-13 72.4
Msa0420830 AT1G60650.2 41.379 87 49 1 11 95 5 91 2.59e-13 70.1
Msa0420830 AT1G60650.1 41.379 87 49 1 11 95 5 91 2.59e-13 70.1
Msa0420830 AT2G41060.1 27.011 348 202 14 19 339 129 451 6.57e-13 70.1
Msa0420830 AT2G41060.3 27.011 348 202 14 19 339 129 451 6.57e-13 70.1
Msa0420830 AT2G41060.2 27.011 348 202 14 19 339 129 451 6.57e-13 70.1
Msa0420830 AT2G46780.1 40.909 66 39 0 19 84 23 88 1.39e-12 68.2
Msa0420830 AT2G46780.2 40.909 66 39 0 19 84 23 88 1.39e-12 68.2
Msa0420830 AT4G03110.1 23.661 224 139 8 19 226 19 226 1.59e-12 68.6
Msa0420830 AT1G03457.2 27.826 230 132 9 19 225 13 231 1.59e-12 68.6
Msa0420830 AT4G03110.2 23.661 224 139 8 19 226 19 226 4.25e-12 67.4
Msa0420830 AT4G03110.3 23.661 224 139 8 19 226 19 226 4.63e-12 67.4
Msa0420830 AT4G39260.3 34.177 79 52 0 107 185 7 85 8.64e-12 61.2
Msa0420830 AT4G39260.3 36.585 82 48 2 19 100 7 84 8.88e-11 58.5
Msa0420830 AT1G76460.1 40.909 66 39 0 19 84 25 90 9.86e-12 65.5
Msa0420830 AT1G71770.1 25.521 192 118 7 4 177 223 407 1.41e-11 66.2
Msa0420830 AT1G71770.2 25.521 192 118 7 4 177 223 407 1.41e-11 66.2
Msa0420830 AT1G11650.2 25.571 219 125 5 20 217 157 358 1.92e-11 65.1
Msa0420830 AT3G23830.2 34.066 91 60 0 103 193 32 122 7.29e-11 60.1
Msa0420830 AT3G23830.1 34.066 91 60 0 103 193 32 122 7.29e-11 60.1
Msa0420830 AT5G59865.1 39.506 81 49 0 107 187 27 107 7.84e-11 59.3
Msa0420830 AT5G61030.2 30.769 104 70 1 84 185 16 119 8.79e-11 62.8
Msa0420830 AT5G61030.1 30.769 104 70 1 84 185 16 119 8.79e-11 62.8

Find 210 sgRNAs with CRISPR-Local

Find 306 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTTTGTCTGAAATAAATTT+TGG 0.169288 3_2:+69596046 None:intergenic
GATGCCCATTAGGCATTATT+TGG 0.172268 3_2:+69596148 None:intergenic
GTGAGGGTTATCGGACTTTC+TGG 0.192489 3_2:+69598756 None:intergenic
CTTCATTTGGTAGTGATTCT+AGG 0.203855 3_2:-69597318 Msa0420830:CDS
ACCGGTCGTCCTCGAGGATT+TGG 0.205607 3_2:-69598426 Msa0420830:CDS
CGTTCTTACAATGGCGGTTT+TGG 0.224937 3_2:-69597292 Msa0420830:CDS
TATACCTAGGGTTGTATCTT+TGG 0.228735 3_2:+69598599 None:intergenic
AAATTGAAATTAGAAATTAT+TGG 0.232359 3_2:-69596288 Msa0420830:three_prime_UTR
ATATCTAACTAAAATCTTAT+AGG 0.233306 3_2:+69596643 None:intergenic
TCTGGCCCTGGTGCTGGTTT+TGG 0.239203 3_2:-69596932 Msa0420830:CDS
GTTTAACAAGTTGTAGTATA+TGG 0.245280 3_2:-69595791 Msa0420830:three_prime_UTR
TGCCTCTAGTGGGTTCTATA+TGG 0.250268 3_2:-69596187 Msa0420830:three_prime_UTR
TGTTGTTGATCAAGTTATTC+AGG 0.257520 3_2:-69598379 Msa0420830:CDS
TATAGGTCGCTTGGAGGTTT+TGG 0.267096 3_2:-69597214 Msa0420830:CDS
ATTTAATCGCTCCATTAAAA+TGG 0.270490 3_2:+69595314 None:intergenic
GGTGGTAGGTTTAGCGATTA+TGG 0.272361 3_2:-69597193 Msa0420830:CDS
GATGAATTTGAAGATTTCTT+TGG 0.276198 3_2:+69597349 None:intergenic
GGCCCATATGGGAGAGGTGG+TGG 0.277336 3_2:-69597001 Msa0420830:CDS
GATGATTTCAGTGGTGGTTT+TGG 0.287960 3_2:-69597154 Msa0420830:CDS
CTTTGAAACATACCTTGATT+TGG 0.312122 3_2:-69595932 Msa0420830:three_prime_UTR
GCCTCTAGTGGGTTCTATAT+GGG 0.315006 3_2:-69596186 Msa0420830:three_prime_UTR
GGATATGGTGGTGGTGGGTT+AGG 0.316266 3_2:-69597022 Msa0420830:CDS
TCCGGCGACGGCGCCAGTCC+CGG 0.317544 3_2:-69598733 Msa0420830:CDS
CCCATATGGGAGAGGTGGTG+GGG 0.320586 3_2:-69596999 Msa0420830:CDS
TATTCTAGTAGGGGAGGTTA+TGG 0.322189 3_2:-69596893 Msa0420830:CDS
GGTGGATTTGACGATTCTTA+TGG 0.325447 3_2:-69597271 Msa0420830:CDS
GGTGGTGGGTTAGGCCCATA+TGG 0.328329 3_2:-69597013 Msa0420830:CDS
GGGAACTGGTTTGGGGATAA+AGG 0.329148 3_2:+69598832 None:intergenic
CGTTCTTGTGTTTGAGGTCC+AGG 0.333311 3_2:-69595499 Msa0420830:three_prime_UTR
ACTAAGCGTTCCCGTGGATT+TGG 0.349095 3_2:-69597798 Msa0420830:CDS
AAGTTAGACTATCACCATTA+TGG 0.354131 3_2:-69596594 Msa0420830:three_prime_UTR
AGTAATTTATGAAATATAAT+AGG 0.356807 3_2:+69595338 None:intergenic
ATTCTAGTAGGGGAGGTTAT+GGG 0.359170 3_2:-69596892 Msa0420830:CDS
GGCCTTGGTGGTGGATATGG+TGG 0.362798 3_2:-69597034 Msa0420830:CDS
GTGAAGTACTTTGAAAGGTA+TGG 0.367146 3_2:-69598486 Msa0420830:CDS
ACAACTTGTTAAACGATTTG+TGG 0.368556 3_2:+69595800 None:intergenic
CCGGTCGTCCTCGAGGATTT+GGG 0.373418 3_2:-69598425 Msa0420830:CDS
GTTATGGCCCTACATCTTAT+AGG 0.373426 3_2:-69597231 Msa0420830:CDS
CCGGCGACGGCGCCAGTCCC+GGG 0.373625 3_2:-69598732 Msa0420830:intron
AACTAATTGAGTGCTATAAT+AGG 0.378453 3_2:+69596371 None:intergenic
ACTAAAATTGACATCCATAA+TGG 0.380191 3_2:+69596580 None:intergenic
ATAACCTCCCCTACTAGAAT+AGG 0.380687 3_2:+69596895 None:intergenic
TGTTAAATCGTCTTGACTAT+TGG 0.385812 3_2:-69595639 Msa0420830:three_prime_UTR
GTCGCCGGAGTGAGGGTTAT+CGG 0.392798 3_2:+69598747 None:intergenic
TGAAACCAAATAATGCCTAA+TGG 0.394810 3_2:-69596153 Msa0420830:three_prime_UTR
AGCACTCAATTAGTTTCAAC+AGG 0.402504 3_2:-69596363 Msa0420830:three_prime_UTR
TATGGAGGCAGTGGTGGTGC+TGG 0.406140 3_2:-69597127 Msa0420830:CDS
TTCAATATTCGATAATTGCT+TGG 0.410637 3_2:+69595855 None:intergenic
TTCATTTGGTAGTGATTCTA+GGG 0.412071 3_2:-69597317 Msa0420830:CDS
CTTGGTGGTGGATATGGTGG+TGG 0.412985 3_2:-69597031 Msa0420830:CDS
ATCTTTCCTATAGTTATGCT+TGG 0.412994 3_2:-69596478 Msa0420830:three_prime_UTR
TTAGTTTGAGATGCACCCTT+TGG 0.413443 3_2:+69598194 None:intergenic
TGATGGGAACATGATTGATA+TGG 0.416351 3_2:-69597730 Msa0420830:CDS
TATGAATCTGGCCCTGGTGC+TGG 0.417018 3_2:-69596938 Msa0420830:CDS
GATTGATGAAGTTCTATCTT+CGG 0.421546 3_2:+69596710 None:intergenic
GAAACCAAATAATGCCTAAT+GGG 0.423169 3_2:-69596152 Msa0420830:three_prime_UTR
CTCAAAGCATGGGAATGTTA+TGG 0.425693 3_2:-69597847 Msa0420830:CDS
GTCGAGGAAGAAGCTTGCTT+AGG 0.426406 3_2:+69598856 None:intergenic
ACATCCCGTTCTTGTGTTTG+AGG 0.431698 3_2:-69595505 Msa0420830:three_prime_UTR
GGTTATGGTGGTCCAGGCAC+TGG 0.434215 3_2:-69596968 Msa0420830:CDS
GAATGTGTATGTCAGGATAA+AGG 0.434999 3_2:+69596251 None:intergenic
ATTAGGATATGATGCCCATT+AGG 0.435220 3_2:+69596138 None:intergenic
TGAAGTACTTTGAAAGGTAT+GGG 0.436031 3_2:-69598485 Msa0420830:CDS
CCCGGGACTGGCGCCGTCGC+CGG 0.436702 3_2:+69598732 None:intergenic
GCCCATATGGGAGAGGTGGT+GGG 0.438600 3_2:-69597000 Msa0420830:CDS
ACTGGTGGAGGTTATGAATC+TGG 0.439273 3_2:-69596950 Msa0420830:CDS
CCATATGGGAGAGGTGGTGG+GGG 0.441700 3_2:-69596998 Msa0420830:CDS
CACGGGAACGCTTAGTGGTA+TGG 0.442562 3_2:+69597805 None:intergenic
AACAATCAAACCAACCCTTC+GGG 0.445490 3_2:+69596320 None:intergenic
TTCGGTTACTCTGGCCGCTA+TGG 0.446589 3_2:-69597070 Msa0420830:CDS
AATATAAGAATGTGTATGTC+AGG 0.446630 3_2:+69596244 None:intergenic
GAAGAGAGCGAACCCGGGAC+TGG 0.447616 3_2:+69598720 None:intergenic
TTGTATTTCTTAATGAACTT+TGG 0.449148 3_2:-69596014 Msa0420830:three_prime_UTR
GGTGGTGCTGGTGGTTATGC+GGG 0.451484 3_2:-69597115 Msa0420830:CDS
GTGTGAATGTGTACTATTGT+AGG 0.451839 3_2:-69596542 Msa0420830:three_prime_UTR
TTTGGAGGTTATGGAGGCAG+TGG 0.453260 3_2:-69597136 Msa0420830:CDS
ATATGGATTCTGAGAGGGAT+TGG 0.456476 3_2:-69595774 Msa0420830:three_prime_UTR
TGGACCTCAAACACAAGAAC+GGG 0.457536 3_2:+69595501 None:intergenic
GGTGGTGGATATGGTGGTGG+TGG 0.458107 3_2:-69597028 Msa0420830:CDS
TTTCTAGAATTTATGAGAAA+GGG 0.459913 3_2:-69595473 Msa0420830:three_prime_UTR
CCCCACCACCTCTCCCATAT+GGG 0.460579 3_2:+69596999 None:intergenic
CAGGAGGACCCTATTCTAGT+AGG 0.461637 3_2:-69596904 Msa0420830:CDS
CCCAAATCCTCGAGGACGAC+CGG 0.461844 3_2:+69598425 None:intergenic
AAATCCACGGGAACGCTTAG+TGG 0.462420 3_2:+69597800 None:intergenic
GTGGTGGATATGGTGGTGGT+GGG 0.463417 3_2:-69597027 Msa0420830:CDS
GGTGGTCCAGGCACTGGTGG+AGG 0.471128 3_2:-69596962 Msa0420830:CDS
TCATAAAACTATCTTGTGTA+AGG 0.471625 3_2:+69596851 None:intergenic
TAACCTCCCCTACTAGAATA+GGG 0.473608 3_2:+69596896 None:intergenic
GGCCGCTATGGATCCTACAT+GGG 0.474978 3_2:-69597058 Msa0420830:CDS
TCGAGGAAGAAGCTTGCTTA+GGG 0.475544 3_2:+69598857 None:intergenic
ACCTGTGATATAACCTGAAA+AGG 0.477025 3_2:+69596428 None:intergenic
CCTCTAGTGGGTTCTATATG+GGG 0.477139 3_2:-69596185 Msa0420830:three_prime_UTR
TAACAATCAAACCAACCCTT+CGG 0.480998 3_2:+69596319 None:intergenic
TAACAAGCAACACATTGTCT+TGG 0.482263 3_2:+69595411 None:intergenic
AAACCTTCAGATACAGTTGC+TGG 0.484805 3_2:+69598134 None:intergenic
CATAAATTCTAGAAAATCCC+TGG 0.485861 3_2:+69595481 None:intergenic
TTTAGCGATTATGGTGGGTA+TGG 0.487404 3_2:-69597184 Msa0420830:CDS
GTTGATAATTTGTTAGCTGA+TGG 0.487526 3_2:-69597747 Msa0420830:CDS
GGCTCACCAAGCATAACTAT+AGG 0.488205 3_2:+69596472 None:intergenic
GGTGGTTATGCGGGCTATAG+AGG 0.488404 3_2:-69597106 Msa0420830:CDS
CTGGCGCCGTCGCCGGAGTG+AGG 0.489242 3_2:+69598739 None:intergenic
TGGCCGCTATGGATCCTACA+TGG 0.493274 3_2:-69597059 Msa0420830:CDS
TCATAACCTCCACCAGTGCC+TGG 0.495641 3_2:+69596956 None:intergenic
AAGAACTTCTTCTCAAAGCA+TGG 0.497829 3_2:-69597858 Msa0420830:CDS
TCTTATAGGCTGATGACTGA+TGG 0.499124 3_2:+69596657 None:intergenic
TATGGCGGTTATGGTGGTCC+AGG 0.499140 3_2:-69596974 Msa0420830:CDS
GGAAGAAGCTTGCTTAGGGT+TGG 0.500076 3_2:+69598861 None:intergenic
CCAAGCGACCTATAAGATGT+AGG 0.501589 3_2:+69597223 None:intergenic
TGGCGCCGTCGCCGGAGTGA+GGG 0.503462 3_2:+69598740 None:intergenic
GTTCTTGTGTTTGAGGTCCA+GGG 0.505289 3_2:-69595498 Msa0420830:three_prime_UTR
ATCATGAAGGATCGACATAC+CGG 0.510399 3_2:-69598444 Msa0420830:CDS
TTGATAATTTGTTAGCTGAT+GGG 0.512546 3_2:-69597746 Msa0420830:CDS
TGGTGGTGCTGGTGGTTATG+CGG 0.514299 3_2:-69597116 Msa0420830:CDS
GGAGGTTATGGAGGCAGTGG+TGG 0.517150 3_2:-69597133 Msa0420830:CDS
ATCGGACTTTCTGGAAGCCA+TGG 0.517401 3_2:+69598765 None:intergenic
TTCTGCACATCTCATTAGCA+TGG 0.517745 3_2:+69595583 None:intergenic
ATCAAGAGGACTATTCCAAA+GGG 0.519300 3_2:-69598209 Msa0420830:CDS
AAATCGTCTTGACTATTGGT+TGG 0.519724 3_2:-69595635 Msa0420830:three_prime_UTR
GTCCCACCAAAACCAGCACC+AGG 0.522725 3_2:+69596926 None:intergenic
AGGAGGACCCTATTCTAGTA+GGG 0.525330 3_2:-69596903 Msa0420830:CDS
AAAACTATCTTGTGTAAGGA+TGG 0.527528 3_2:+69596855 None:intergenic
CTAGAATCACTACCAAATGA+AGG 0.529653 3_2:+69597319 None:intergenic
TACAAGGAACTTACTACAGG+TGG 0.532036 3_2:-69596779 Msa0420830:three_prime_UTR
GATTGATATGGATGGTACTC+AGG 0.532207 3_2:-69597718 Msa0420830:intron
TTATGAAATATAATAGGTCA+TGG 0.534465 3_2:+69595344 None:intergenic
AACTGATTCCGTTATCATGA+AGG 0.535063 3_2:-69598457 Msa0420830:CDS
TTGATATTATCTGCCTCTAG+TGG 0.537992 3_2:-69596198 Msa0420830:three_prime_UTR
GGTGGAGATGATTTCAGTGG+TGG 0.538564 3_2:-69597160 Msa0420830:CDS
GCCGCTATGGATCCTACATG+GGG 0.538686 3_2:-69597057 Msa0420830:CDS
GGAGGCAGTGGTGGTGCTGG+TGG 0.540901 3_2:-69597124 Msa0420830:CDS
AGAGGAGGAGAATCCTCATT+CGG 0.541881 3_2:-69597088 Msa0420830:CDS
CTTATAGGCTGATGACTGAT+GGG 0.541950 3_2:+69596658 None:intergenic
ACATCTTATAGGTCGCTTGG+AGG 0.543240 3_2:-69597220 Msa0420830:CDS
ATGTCGATCCTTCATGATAA+CGG 0.543779 3_2:+69598449 None:intergenic
GGAGGTTATGAATCTGGCCC+TGG 0.544539 3_2:-69596944 Msa0420830:CDS
TTCTAGTAGGGGAGGTTATG+GGG 0.546191 3_2:-69596891 Msa0420830:CDS
GAATCCTCATTCGGTTACTC+TGG 0.546282 3_2:-69597079 Msa0420830:CDS
CAAGCGACCTATAAGATGTA+GGG 0.548725 3_2:+69597224 None:intergenic
CCTACATCTTATAGGTCGCT+TGG 0.550258 3_2:-69597223 Msa0420830:CDS
AGAACTTCTTCTCAAAGCAT+GGG 0.550482 3_2:-69597857 Msa0420830:CDS
AACTACAAAACCAAATCCAC+GGG 0.550513 3_2:+69597788 None:intergenic
TGATATTATCTGCCTCTAGT+GGG 0.550810 3_2:-69596197 Msa0420830:three_prime_UTR
TGGAAGCCATGGTTGAAGAT+CGG 0.550819 3_2:+69598776 None:intergenic
TCACATCATCAATGACAAGC+AGG 0.551218 3_2:-69598352 Msa0420830:intron
TGTATGTCAGGATAAAGGTT+CGG 0.552865 3_2:+69596256 None:intergenic
AGCGATTATGGTGGGTATGG+AGG 0.554528 3_2:-69597181 Msa0420830:CDS
TGACCTGAAACAGTGGGAAG+GGG 0.555087 3_2:+69598811 None:intergenic
GTGGTGGGTTAGGCCCATAT+GGG 0.555497 3_2:-69597012 Msa0420830:CDS
GTGACCTGAAACAGTGGGAA+GGG 0.556156 3_2:+69598810 None:intergenic
GGTAGGTTTAGCGATTATGG+TGG 0.558160 3_2:-69597190 Msa0420830:CDS
TCATGCAGGAAAATCTTCAT+CGG 0.559658 3_2:-69598630 Msa0420830:intron
GATAACCCTCACTCCGGCGA+CGG 0.564558 3_2:-69598745 Msa0420830:CDS
CTCTAGTGGGTTCTATATGG+GGG 0.564678 3_2:-69596184 Msa0420830:three_prime_UTR
TAATCGACTACACCAAATCA+AGG 0.566928 3_2:+69595920 None:intergenic
TTAGGCCCATATGGGAGAGG+TGG 0.567019 3_2:-69597004 Msa0420830:CDS
GGGTTAGGCCCATATGGGAG+AGG 0.567087 3_2:-69597007 Msa0420830:CDS
TCTCTTGCCTTTGTGACATG+AGG 0.567848 3_2:+69595543 None:intergenic
TATGGTGGTCCAGGCACTGG+TGG 0.570069 3_2:-69596965 Msa0420830:CDS
GCGGCCAGAGTAACCGAATG+AGG 0.570661 3_2:+69597075 None:intergenic
GTTGTAGGTTGAGATCAAGA+AGG 0.571670 3_2:-69597377 Msa0420830:intron
CGCTATGGATCCTACATGGG+GGG 0.574927 3_2:-69597055 Msa0420830:CDS
AGTTACAAGGAACTTACTAC+AGG 0.575896 3_2:-69596782 Msa0420830:three_prime_UTR
GATTATGGTGGGTATGGAGG+TGG 0.580479 3_2:-69597178 Msa0420830:CDS
ATTCCAGCAACTGTATCTGA+AGG 0.581606 3_2:-69598137 Msa0420830:intron
AAACTACAAAACCAAATCCA+CGG 0.581859 3_2:+69597787 None:intergenic
GTAGTATATGGATTCTGAGA+GGG 0.582185 3_2:-69595779 Msa0420830:three_prime_UTR
TCTAGTAGGGGAGGTTATGG+GGG 0.582748 3_2:-69596890 Msa0420830:CDS
TGATTTGTGACCTGAAACAG+TGG 0.584225 3_2:+69598804 None:intergenic
TTGCAGTAGAAATTGCATGC+AGG 0.584908 3_2:-69596821 Msa0420830:three_prime_UTR
ATTCATCCGATCTTCAACCA+TGG 0.588342 3_2:-69598782 Msa0420830:exon
CATATCAGGTTGAAATCAAG+AGG 0.589740 3_2:-69598223 Msa0420830:intron
TATGAAATATAATAGGTCAT+GGG 0.590679 3_2:+69595345 None:intergenic
TTGTCTAAGCGACATGCTAG+TGG 0.593623 3_2:+69596733 None:intergenic
GTAGGTTTAGCGATTATGGT+GGG 0.596984 3_2:-69597189 Msa0420830:CDS
TGCAGGAAAATCTTCATCGG+AGG 0.597403 3_2:-69598627 Msa0420830:intron
ATTTGGGTTTATCACTTATG+CGG 0.598016 3_2:-69598409 Msa0420830:CDS
TCTAGGGCACGTTCTTACAA+TGG 0.598638 3_2:-69597301 Msa0420830:CDS
GTAGGGCCATAACCTCCAGC+AGG 0.600122 3_2:+69597241 None:intergenic
AATCAAGAGGACTATTCCAA+AGG 0.601418 3_2:-69598210 Msa0420830:CDS
CTGGACCTCAAACACAAGAA+CGG 0.610120 3_2:+69595500 None:intergenic
ATCAGCTAACAAATTATCAA+CGG 0.611456 3_2:+69597749 None:intergenic
AGGGCACGTTCTTACAATGG+CGG 0.614082 3_2:-69597298 Msa0420830:CDS
CGACATACCGGTCGTCCTCG+AGG 0.619903 3_2:-69598432 Msa0420830:CDS
CTAAACATGTAACTAAATCG+TGG 0.626478 3_2:+69596404 None:intergenic
AAGGCAAGAGAATCAGATTG+TGG 0.627472 3_2:-69595531 Msa0420830:three_prime_UTR
TGTGACCTGAAACAGTGGGA+AGG 0.629208 3_2:+69598809 None:intergenic
GAAGTACTTTGAAAGGTATG+GGG 0.631008 3_2:-69598484 Msa0420830:CDS
GACCTGAAACAGTGGGAAGG+GGG 0.631085 3_2:+69598812 None:intergenic
GGACCCTATTCTAGTAGGGG+AGG 0.635400 3_2:-69596899 Msa0420830:CDS
TTAGCCAAAGATACAACCCT+AGG 0.645736 3_2:-69598603 Msa0420830:intron
AAATTTATTTCAGACAAACA+AGG 0.646887 3_2:-69596043 Msa0420830:three_prime_UTR
AAAGTTGGGATAACAGCTAG+TGG 0.649800 3_2:+69595985 None:intergenic
CATACCACTAAGCGTTCCCG+TGG 0.650362 3_2:-69597804 Msa0420830:CDS
AAAAGTTCCTCATGTCACAA+AGG 0.657110 3_2:-69595550 Msa0420830:three_prime_UTR
ACAAGGAACTTACTACAGGT+GGG 0.658986 3_2:-69596778 Msa0420830:three_prime_UTR
TGTAGTATATGGATTCTGAG+AGG 0.659333 3_2:-69595780 Msa0420830:three_prime_UTR
GGTTATGCGGGCTATAGAGG+AGG 0.660221 3_2:-69597103 Msa0420830:CDS
GTTTGGGGATAAAGGAGTCG+AGG 0.661541 3_2:+69598840 None:intergenic
CCCCATATAGAACCCACTAG+AGG 0.662656 3_2:+69596185 None:intergenic
GGGAACATGATTGATATGGA+TGG 0.665118 3_2:-69597726 Msa0420830:CDS
AAGTCCGATAACCCTCACTC+CGG 0.666720 3_2:-69598751 Msa0420830:CDS
GGAGGACCCTATTCTAGTAG+GGG 0.666818 3_2:-69596902 Msa0420830:CDS
CCGCTATGGATCCTACATGG+GGG 0.674316 3_2:-69597056 Msa0420830:CDS
TCGGGAAGAAAAGTGACTTG+AGG 0.677675 3_2:+69596338 None:intergenic
CACCACCATATCCACCACCA+AGG 0.678240 3_2:+69597032 None:intergenic
GGAGGTGGAGATGATTTCAG+TGG 0.679386 3_2:-69597163 Msa0420830:CDS
TCCCACCAAAACCAGCACCA+GGG 0.688176 3_2:+69596927 None:intergenic
GTGATAAACCCAAATCCTCG+AGG 0.709143 3_2:+69598417 None:intergenic
GAGATGTGCAGAAAATGCTG+AGG 0.713425 3_2:-69595573 Msa0420830:three_prime_UTR
GATTTGTGACCTGAAACAGT+GGG 0.745795 3_2:+69598805 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAATTTTTTATTTTAAATAA+TGG - chr3_2:69598492-69598511 Msa0420830:CDS 0.0%
!!! TTCAGTATTATTTATTTTAT+AGG - chr3_2:69595642-69595661 Msa0420830:three_prime_UTR 10.0%
!! AAATTGAAATTAGAAATTAT+TGG - chr3_2:69597893-69597912 Msa0420830:intron 10.0%
!! AGTAATTTATGAAATATAAT+AGG + chr3_2:69598846-69598865 None:intergenic 10.0%
!! AGTAGTAATAATAATAATTG+CGG - chr3_2:69596617-69596636 Msa0420830:three_prime_UTR 15.0%
!! ATATCTAACTAAAATCTTAT+AGG + chr3_2:69597541-69597560 None:intergenic 15.0%
!! TAAAAGTAAAAACTACAATT+AGG + chr3_2:69598063-69598082 None:intergenic 15.0%
!!! ATTCAGTTGAATTTTTGATT+TGG - chr3_2:69595889-69595908 Msa0420830:three_prime_UTR 20.0%
!!! TTCAGTTGAATTTTTGATTT+GGG - chr3_2:69595890-69595909 Msa0420830:three_prime_UTR 20.0%
!!! AAAACTAAGAAGATTTTTGT+TGG - chr3_2:69596017-69596036 Msa0420830:three_prime_UTR 20.0%
!!! TTAGTTTGGTTTGTTTATTT+AGG - chr3_2:69596486-69596505 Msa0420830:three_prime_UTR 20.0%
!!! TAGTTTGGTTTGTTTATTTA+GGG - chr3_2:69596487-69596506 Msa0420830:three_prime_UTR 20.0%
!! TTCTATTTATGAATGAATCT+AGG - chr3_2:69596766-69596785 Msa0420830:three_prime_UTR 20.0%
!!! TGTTTTGTGAATTTTGTTTT+AGG - chr3_2:69598093-69598112 Msa0420830:intron 20.0%
!!! TGTTTGTCTGAAATAAATTT+TGG + chr3_2:69598138-69598157 None:intergenic 20.0%
!! AAATTTATTTCAGACAAACA+AGG - chr3_2:69598138-69598157 Msa0420830:CDS 20.0%
!! TTGTATTTCTTAATGAACTT+TGG - chr3_2:69598167-69598186 Msa0420830:CDS 20.0%
!!! TAAACAGTCTTTTAAGATAA+TGG - chr3_2:69598460-69598479 Msa0420830:CDS 20.0%
!!! TTTTTTCAATTTTGGATTTG+TGG - chr3_2:69598569-69598588 Msa0420830:intron 20.0%
!!! TTTTCTAGAATTTATGAGAA+AGG - chr3_2:69598707-69598726 Msa0420830:intron 20.0%
!!! TTTCTAGAATTTATGAGAAA+GGG - chr3_2:69598708-69598727 Msa0420830:intron 20.0%
!! TATGAAATATAATAGGTCAT+GGG + chr3_2:69598839-69598858 None:intergenic 20.0%
!! TTATGAAATATAATAGGTCA+TGG + chr3_2:69598840-69598859 None:intergenic 20.0%
!!! ATAAATTACTGCCATTTTAA+TGG - chr3_2:69598856-69598875 Msa0420830:five_prime_UTR 20.0%
! AATAGTGAAAAAGAGAAATC+GGG + chr3_2:69595517-69595536 None:intergenic 25.0%
! GAATAGTGAAAAAGAGAAAT+CGG + chr3_2:69595518-69595537 None:intergenic 25.0%
! TGAAAAGATGTTTATACCTA+GGG + chr3_2:69595597-69595616 None:intergenic 25.0%
! ATGAAAAGATGTTTATACCT+AGG + chr3_2:69595598-69595617 None:intergenic 25.0%
! ATCAGCTAACAAATTATCAA+CGG + chr3_2:69596435-69596454 None:intergenic 25.0%
!!! TTGATAATTTGTTAGCTGAT+GGG - chr3_2:69596435-69596454 Msa0420830:three_prime_UTR 25.0%
!!! TAAATAGAACCTTTTTTCCT+TGG + chr3_2:69596755-69596774 None:intergenic 25.0%
! GATGAATTTGAAGATTTCTT+TGG + chr3_2:69596835-69596854 None:intergenic 25.0%
! TCATAAAACTATCTTGTGTA+AGG + chr3_2:69597333-69597352 None:intergenic 25.0%
! ACTAAAATTGACATCCATAA+TGG + chr3_2:69597604-69597623 None:intergenic 25.0%
!! TTTTGTAACATCTTCGATAT+AGG + chr3_2:69597733-69597752 None:intergenic 25.0%
! AACTAATTGAGTGCTATAAT+AGG + chr3_2:69597813-69597832 None:intergenic 25.0%
! AATATAAGAATGTGTATGTC+AGG + chr3_2:69597940-69597959 None:intergenic 25.0%
!! TATTTTGTTAGTGTTAGCAT+CGG - chr3_2:69597956-69597975 Msa0420830:intron 25.0%
!! GTATGTTTCAAAGATTTTAG+AGG + chr3_2:69598242-69598261 None:intergenic 25.0%
! TTCAATATTCGATAATTGCT+TGG + chr3_2:69598329-69598348 None:intergenic 25.0%
! GTTTAACAAGTTGTAGTATA+TGG - chr3_2:69598390-69598409 Msa0420830:CDS 25.0%
!!! TTGGTTGGTTTTTTCAATTT+TGG - chr3_2:69598561-69598580 Msa0420830:intron 25.0%
ATAGTGAAAAAGAGAAATCG+GGG + chr3_2:69595516-69595535 None:intergenic 30.0%
!! CTTTTGTGAAGTACTTTGAA+AGG - chr3_2:69595690-69595709 Msa0420830:three_prime_UTR 30.0%
! TGAAGTACTTTGAAAGGTAT+GGG - chr3_2:69595696-69595715 Msa0420830:three_prime_UTR 30.0%
! ATTTGGGTTTATCACTTATG+CGG - chr3_2:69595772-69595791 Msa0420830:three_prime_UTR 30.0%
TGTTGTTGATCAAGTTATTC+AGG - chr3_2:69595802-69595821 Msa0420830:three_prime_UTR 30.0%
ACAAAGTGAAACCGTAATTA+GGG + chr3_2:69595860-69595879 None:intergenic 30.0%
!! TTGATTTGTCTGTTCATATC+AGG - chr3_2:69595944-69595963 Msa0420830:three_prime_UTR 30.0%
! ACTAAGAAGATTTTTGTTGG+TGG - chr3_2:69596020-69596039 Msa0420830:three_prime_UTR 30.0%
!!! TTTGTTTTCGAGTGAAAGTA+TGG - chr3_2:69596184-69596203 Msa0420830:three_prime_UTR 30.0%
!!! TTTGTTTTCGAGTGAAAGTA+TGG - chr3_2:69596184-69596203 Msa0420830:three_prime_UTR 30.0%
AGCTTATTGTATGCTTATCT+TGG - chr3_2:69596279-69596298 Msa0420830:three_prime_UTR 30.0%
GCTTATTGTATGCTTATCTT+GGG - chr3_2:69596280-69596299 Msa0420830:three_prime_UTR 30.0%
AAACTACAAAACCAAATCCA+CGG + chr3_2:69596397-69596416 None:intergenic 30.0%
!!! TGTAGTTTTTGATAGCGATA+AGG - chr3_2:69596409-69596428 Msa0420830:three_prime_UTR 30.0%
!! GTTGATAATTTGTTAGCTGA+TGG - chr3_2:69596434-69596453 Msa0420830:three_prime_UTR 30.0%
! AGGGTGTTTAAAATTGAAAC+TGG - chr3_2:69596506-69596525 Msa0420830:three_prime_UTR 30.0%
!!! TTTTTTCCTTGGTTTTGGTT+GGG + chr3_2:69596744-69596763 None:intergenic 30.0%
! TCATCTTCTTTTCCTTCATT+TGG - chr3_2:69596850-69596869 Msa0420830:exon 30.0%
!! TTCATTTGGTAGTGATTCTA+GGG - chr3_2:69596864-69596883 Msa0420830:CDS 30.0%
AAAACTATCTTGTGTAAGGA+TGG + chr3_2:69597329-69597348 None:intergenic 30.0%
! AAGCATTTTCTCTAGTTACA+AGG - chr3_2:69597386-69597405 Msa0420830:intron 30.0%
GATTGATGAAGTTCTATCTT+CGG + chr3_2:69597474-69597493 None:intergenic 30.0%
AAGTTAGACTATCACCATTA+TGG - chr3_2:69597587-69597606 Msa0420830:intron 30.0%
ATCTTTCCTATAGTTATGCT+TGG - chr3_2:69597703-69597722 Msa0420830:intron 30.0%
! AGATGTTACAAAACCTTTTC+AGG - chr3_2:69597740-69597759 Msa0420830:CDS 30.0%
CTAAACATGTAACTAAATCG+TGG + chr3_2:69597780-69597799 None:intergenic 30.0%
TGAAACCAAATAATGCCTAA+TGG - chr3_2:69598028-69598047 Msa0420830:intron 30.0%
GAAACCAAATAATGCCTAAT+GGG - chr3_2:69598029-69598048 Msa0420830:intron 30.0%
GACTATCAAAAAGCAAAGTT+GGG + chr3_2:69598213-69598232 None:intergenic 30.0%
AGACTATCAAAAAGCAAAGT+TGG + chr3_2:69598214-69598233 None:intergenic 30.0%
!!! TTTGCTTTTTGATAGTCTTG+TGG - chr3_2:69598216-69598235 Msa0420830:CDS 30.0%
!! CTTTGAAACATACCTTGATT+TGG - chr3_2:69598249-69598268 Msa0420830:intron 30.0%
!! AACTTTTAGCTAACGATACA+TGG - chr3_2:69598303-69598322 Msa0420830:intron 30.0%
!! ACAACTTGTTAAACGATTTG+TGG + chr3_2:69598384-69598403 None:intergenic 30.0%
TGTTAAATCGTCTTGACTAT+TGG - chr3_2:69598542-69598561 Msa0420830:intron 30.0%
! CATAAATTCTAGAAAATCCC+TGG + chr3_2:69598703-69598722 None:intergenic 30.0%
!! CTCATTTTTCGTTTTCATGC+AGG - chr3_2:69595537-69595556 Msa0420830:three_prime_UTR 35.0%
TCATGCAGGAAAATCTTCAT+CGG - chr3_2:69595551-69595570 Msa0420830:three_prime_UTR 35.0%
TATACCTAGGGTTGTATCTT+TGG + chr3_2:69595585-69595604 None:intergenic 35.0%
! GTGAAGTACTTTGAAAGGTA+TGG - chr3_2:69595695-69595714 Msa0420830:three_prime_UTR 35.0%
! GAAGTACTTTGAAAGGTATG+GGG - chr3_2:69595697-69595716 Msa0420830:three_prime_UTR 35.0%
! AACTGATTCCGTTATCATGA+AGG - chr3_2:69595724-69595743 Msa0420830:three_prime_UTR 35.0%
ATGTCGATCCTTCATGATAA+CGG + chr3_2:69595735-69595754 None:intergenic 35.0%
AGCAGGTAAAACCCTAATTA+CGG - chr3_2:69595846-69595865 Msa0420830:three_prime_UTR 35.0%
CACAAAGTGAAACCGTAATT+AGG + chr3_2:69595861-69595880 None:intergenic 35.0%
!! CATATCAGGTTGAAATCAAG+AGG - chr3_2:69595958-69595977 Msa0420830:three_prime_UTR 35.0%
AATCAAGAGGACTATTCCAA+AGG - chr3_2:69595971-69595990 Msa0420830:three_prime_UTR 35.0%
ATCAAGAGGACTATTCCAAA+GGG - chr3_2:69595972-69595991 Msa0420830:three_prime_UTR 35.0%
AAGAACTTCTTCTCAAAGCA+TGG - chr3_2:69596323-69596342 Msa0420830:three_prime_UTR 35.0%
AGAACTTCTTCTCAAAGCAT+GGG - chr3_2:69596324-69596343 Msa0420830:three_prime_UTR 35.0%
AACTACAAAACCAAATCCAC+GGG + chr3_2:69596396-69596415 None:intergenic 35.0%
TGATGGGAACATGATTGATA+TGG - chr3_2:69596451-69596470 Msa0420830:three_prime_UTR 35.0%
GAACATAGGTTAGTGGAAAT+TGG - chr3_2:69596542-69596561 Msa0420830:three_prime_UTR 35.0%
AAAGTGAGACATCACATTGA+TGG + chr3_2:69596657-69596676 None:intergenic 35.0%
!!! CTTTTTTCCTTGGTTTTGGT+TGG + chr3_2:69596745-69596764 None:intergenic 35.0%
CAACCAAAACCAAGGAAAAA+AGG - chr3_2:69596743-69596762 Msa0420830:three_prime_UTR 35.0%
!!! GAACCTTTTTTCCTTGGTTT+TGG + chr3_2:69596749-69596768 None:intergenic 35.0%
! TTGACTCGATTCTTTGTTGT+AGG - chr3_2:69596789-69596808 Msa0420830:three_prime_UTR 35.0%
CTAGAATCACTACCAAATGA+AGG + chr3_2:69596865-69596884 None:intergenic 35.0%
!! CTTCATTTGGTAGTGATTCT+AGG - chr3_2:69596863-69596882 Msa0420830:CDS 35.0%
AGTTACAAGGAACTTACTAC+AGG - chr3_2:69597399-69597418 Msa0420830:intron 35.0%
GTGTGAATGTGTACTATTGT+AGG - chr3_2:69597639-69597658 Msa0420830:intron 35.0%
!!! ACCTTTTCAGGTTATATCAC+AGG - chr3_2:69597752-69597771 Msa0420830:CDS 35.0%
ACCTGTGATATAACCTGAAA+AGG + chr3_2:69597756-69597775 None:intergenic 35.0%
! AGCACTCAATTAGTTTCAAC+AGG - chr3_2:69597818-69597837 Msa0420830:CDS 35.0%
TAACAATCAAACCAACCCTT+CGG + chr3_2:69597865-69597884 None:intergenic 35.0%
TGTATGTCAGGATAAAGGTT+CGG + chr3_2:69597928-69597947 None:intergenic 35.0%
GAATGTGTATGTCAGGATAA+AGG + chr3_2:69597933-69597952 None:intergenic 35.0%
TTGATATTATCTGCCTCTAG+TGG - chr3_2:69597983-69598002 Msa0420830:intron 35.0%
TGATATTATCTGCCTCTAGT+GGG - chr3_2:69597984-69598003 Msa0420830:intron 35.0%
ATTAGGATATGATGCCCATT+AGG + chr3_2:69598046-69598065 None:intergenic 35.0%
TAATCGACTACACCAAATCA+AGG + chr3_2:69598264-69598283 None:intergenic 35.0%
TGTAGTATATGGATTCTGAG+AGG - chr3_2:69598401-69598420 Msa0420830:CDS 35.0%
! GTAGTATATGGATTCTGAGA+GGG - chr3_2:69598402-69598421 Msa0420830:CDS 35.0%
!! TTGCGTTCGTTTTGAATGTT+AGG - chr3_2:69598437-69598456 Msa0420830:CDS 35.0%
AAATCGTCTTGACTATTGGT+TGG - chr3_2:69598546-69598565 Msa0420830:intron 35.0%
AAAAGTTCCTCATGTCACAA+AGG - chr3_2:69598631-69598650 Msa0420830:intron 35.0%
TAACAAGCAACACATTGTCT+TGG + chr3_2:69598773-69598792 None:intergenic 35.0%
GATTTGTGACCTGAAACAGT+GGG + chr3_2:69595379-69595398 None:intergenic 40.0%
! TGATTTGTGACCTGAAACAG+TGG + chr3_2:69595380-69595399 None:intergenic 40.0%
ATTCATCCGATCTTCAACCA+TGG - chr3_2:69595399-69595418 Msa0420830:three_prime_UTR 40.0%
TTAGCCAAAGATACAACCCT+AGG - chr3_2:69595578-69595597 Msa0420830:three_prime_UTR 40.0%
ATCATGAAGGATCGACATAC+CGG - chr3_2:69595737-69595756 Msa0420830:three_prime_UTR 40.0%
TCACATCATCAATGACAAGC+AGG - chr3_2:69595829-69595848 Msa0420830:three_prime_UTR 40.0%
! TTAGTTTGAGATGCACCCTT+TGG + chr3_2:69595990-69596009 None:intergenic 40.0%
ATTCCAGCAACTGTATCTGA+AGG - chr3_2:69596044-69596063 Msa0420830:three_prime_UTR 40.0%
AAACCTTCAGATACAGTTGC+TGG + chr3_2:69596050-69596069 None:intergenic 40.0%
CTCAAAGCATGGGAATGTTA+TGG - chr3_2:69596334-69596353 Msa0420830:three_prime_UTR 40.0%
GGGAACATGATTGATATGGA+TGG - chr3_2:69596455-69596474 Msa0420830:three_prime_UTR 40.0%
GATTGATATGGATGGTACTC+AGG - chr3_2:69596463-69596482 Msa0420830:three_prime_UTR 40.0%
TACTGCTGAACATAGGTTAG+TGG - chr3_2:69596535-69596554 Msa0420830:three_prime_UTR 40.0%
TTTGACGTGCAAAGATGTTG+TGG - chr3_2:69596566-69596585 Msa0420830:three_prime_UTR 40.0%
TCACATTGATGGAAAGCAAC+AGG + chr3_2:69596646-69596665 None:intergenic 40.0%
TCAGACACTTGCAATAACAC+TGG + chr3_2:69596681-69596700 None:intergenic 40.0%
TTGCAAGTGTCTGACATATG+TGG - chr3_2:69596687-69596706 Msa0420830:three_prime_UTR 40.0%
! GTTGTAGGTTGAGATCAAGA+AGG - chr3_2:69596804-69596823 Msa0420830:three_prime_UTR 40.0%
! GGTGGATTTGACGATTCTTA+TGG - chr3_2:69596910-69596929 Msa0420830:CDS 40.0%
! TCTTATGGAAGTTTTCCTGC+TGG - chr3_2:69596925-69596944 Msa0420830:CDS 40.0%
GTTATGGCCCTACATCTTAT+AGG - chr3_2:69596950-69596969 Msa0420830:CDS 40.0%
CAAGCGACCTATAAGATGTA+GGG + chr3_2:69596960-69596979 None:intergenic 40.0%
GTAGGTTTAGCGATTATGGT+GGG - chr3_2:69596992-69597011 Msa0420830:CDS 40.0%
!! TTTAGCGATTATGGTGGGTA+TGG - chr3_2:69596997-69597016 Msa0420830:CDS 40.0%
! GATGATTTCAGTGGTGGTTT+TGG - chr3_2:69597027-69597046 Msa0420830:CDS 40.0%
TAACCTCCCCTACTAGAATA+GGG + chr3_2:69597288-69597307 None:intergenic 40.0%
ATAACCTCCCCTACTAGAAT+AGG + chr3_2:69597289-69597308 None:intergenic 40.0%
TATTCTAGTAGGGGAGGTTA+TGG - chr3_2:69597288-69597307 Msa0420830:CDS 40.0%
ATTCTAGTAGGGGAGGTTAT+GGG - chr3_2:69597289-69597308 Msa0420830:CDS 40.0%
TTGCAGTAGAAATTGCATGC+AGG - chr3_2:69597360-69597379 Msa0420830:CDS 40.0%
TACAAGGAACTTACTACAGG+TGG - chr3_2:69597402-69597421 Msa0420830:intron 40.0%
ACAAGGAACTTACTACAGGT+GGG - chr3_2:69597403-69597422 Msa0420830:intron 40.0%
CTTATAGGCTGATGACTGAT+GGG + chr3_2:69597526-69597545 None:intergenic 40.0%
TCTTATAGGCTGATGACTGA+TGG + chr3_2:69597527-69597546 None:intergenic 40.0%
!!! AAGTCACTTTTCTTCCCGAA+GGG - chr3_2:69597847-69597866 Msa0420830:CDS 40.0%
AACAATCAAACCAACCCTTC+GGG + chr3_2:69597864-69597883 None:intergenic 40.0%
GATGCCCATTAGGCATTATT+TGG + chr3_2:69598036-69598055 None:intergenic 40.0%
AAAGTTGGGATAACAGCTAG+TGG + chr3_2:69598199-69598218 None:intergenic 40.0%
! ATATGGATTCTGAGAGGGAT+TGG - chr3_2:69598407-69598426 Msa0420830:CDS 40.0%
TTCTGCACATCTCATTAGCA+TGG + chr3_2:69598601-69598620 None:intergenic 40.0%
AAGGCAAGAGAATCAGATTG+TGG - chr3_2:69598650-69598669 Msa0420830:intron 40.0%
! TCGAGGAAGAAGCTTGCTTA+GGG + chr3_2:69595327-69595346 None:intergenic 45.0%
TGGAAGCCATGGTTGAAGAT+CGG + chr3_2:69595408-69595427 None:intergenic 45.0%
TGCAGGAAAATCTTCATCGG+AGG - chr3_2:69595554-69595573 Msa0420830:three_prime_UTR 45.0%
GTGATAAACCCAAATCCTCG+AGG + chr3_2:69595767-69595786 None:intergenic 45.0%
! GGATGGTACTCAGGTTAGTT+TGG - chr3_2:69596472-69596491 Msa0420830:three_prime_UTR 45.0%
GTGATGCTACTGCTGAACAT+AGG - chr3_2:69596528-69596547 Msa0420830:three_prime_UTR 45.0%
CAAGTGTCTGACATATGTGG+CGG - chr3_2:69596690-69596709 Msa0420830:three_prime_UTR 45.0%
AAGTGTCTGACATATGTGGC+GGG - chr3_2:69596691-69596710 Msa0420830:three_prime_UTR 45.0%
TATCTGCCCAACCAAAACCA+AGG - chr3_2:69596735-69596754 Msa0420830:three_prime_UTR 45.0%
! TCTAGGGCACGTTCTTACAA+TGG - chr3_2:69596880-69596899 Msa0420830:CDS 45.0%
! CGTTCTTACAATGGCGGTTT+TGG - chr3_2:69596889-69596908 Msa0420830:CDS 45.0%
!! TCTTACAATGGCGGTTTTGG+TGG - chr3_2:69596892-69596911 Msa0420830:CDS 45.0%
! TATGGAAGTTTTCCTGCTGG+AGG - chr3_2:69596928-69596947 Msa0420830:CDS 45.0%
! AGTTTTCCTGCTGGAGGTTA+TGG - chr3_2:69596934-69596953 Msa0420830:CDS 45.0%
CCAAGCGACCTATAAGATGT+AGG + chr3_2:69596961-69596980 None:intergenic 45.0%
CCTACATCTTATAGGTCGCT+TGG - chr3_2:69596958-69596977 Msa0420830:CDS 45.0%
ACATCTTATAGGTCGCTTGG+AGG - chr3_2:69596961-69596980 Msa0420830:CDS 45.0%
! TATAGGTCGCTTGGAGGTTT+TGG - chr3_2:69596967-69596986 Msa0420830:CDS 45.0%
GGTGGTAGGTTTAGCGATTA+TGG - chr3_2:69596988-69597007 Msa0420830:CDS 45.0%
GGTAGGTTTAGCGATTATGG+TGG - chr3_2:69596991-69597010 Msa0420830:CDS 45.0%
!!! GATTTCAGTGGTGGTTTTGG+AGG - chr3_2:69597030-69597049 Msa0420830:CDS 45.0%
!!! AGTGGTGGTTTTGGAGGTTA+TGG - chr3_2:69597036-69597055 Msa0420830:CDS 45.0%
AGAGGAGGAGAATCCTCATT+CGG - chr3_2:69597093-69597112 Msa0420830:CDS 45.0%
GAATCCTCATTCGGTTACTC+TGG - chr3_2:69597102-69597121 Msa0420830:CDS 45.0%
ACTGGTGGAGGTTATGAATC+TGG - chr3_2:69597231-69597250 Msa0420830:CDS 45.0%
AGGAGGACCCTATTCTAGTA+GGG - chr3_2:69597278-69597297 Msa0420830:CDS 45.0%
TTCTAGTAGGGGAGGTTATG+GGG - chr3_2:69597290-69597309 Msa0420830:CDS 45.0%
TTGTCTAAGCGACATGCTAG+TGG + chr3_2:69597451-69597470 None:intergenic 45.0%
GGCTCACCAAGCATAACTAT+AGG + chr3_2:69597712-69597731 None:intergenic 45.0%
TCGGGAAGAAAAGTGACTTG+AGG + chr3_2:69597846-69597865 None:intergenic 45.0%
!!! CAAGTCACTTTTCTTCCCGA+AGG - chr3_2:69597846-69597865 Msa0420830:CDS 45.0%
!! TGCCTCTAGTGGGTTCTATA+TGG - chr3_2:69597994-69598013 Msa0420830:intron 45.0%
!! GCCTCTAGTGGGTTCTATAT+GGG - chr3_2:69597995-69598014 Msa0420830:intron 45.0%
!! CCTCTAGTGGGTTCTATATG+GGG - chr3_2:69597996-69598015 Msa0420830:intron 45.0%
!! CTCTAGTGGGTTCTATATGG+GGG - chr3_2:69597997-69598016 Msa0420830:intron 45.0%
GAGATGTGCAGAAAATGCTG+AGG - chr3_2:69598608-69598627 Msa0420830:CDS 45.0%
TCTCTTGCCTTTGTGACATG+AGG + chr3_2:69598641-69598660 None:intergenic 45.0%
ACATCCCGTTCTTGTGTTTG+AGG - chr3_2:69598676-69598695 Msa0420830:intron 45.0%
TGGACCTCAAACACAAGAAC+GGG + chr3_2:69598683-69598702 None:intergenic 45.0%
CTGGACCTCAAACACAAGAA+CGG + chr3_2:69598684-69598703 None:intergenic 45.0%
! GTTCTTGTGTTTGAGGTCCA+GGG - chr3_2:69598683-69598702 Msa0420830:intron 45.0%
! GTCGAGGAAGAAGCTTGCTT+AGG + chr3_2:69595328-69595347 None:intergenic 50.0%
GTTTGGGGATAAAGGAGTCG+AGG + chr3_2:69595344-69595363 None:intergenic 50.0%
!! GGGAACTGGTTTGGGGATAA+AGG + chr3_2:69595352-69595371 None:intergenic 50.0%
TGACCTGAAACAGTGGGAAG+GGG + chr3_2:69595373-69595392 None:intergenic 50.0%
GTGACCTGAAACAGTGGGAA+GGG + chr3_2:69595374-69595393 None:intergenic 50.0%
TGTGACCTGAAACAGTGGGA+AGG + chr3_2:69595375-69595394 None:intergenic 50.0%
! ATCGGACTTTCTGGAAGCCA+TGG + chr3_2:69595419-69595438 None:intergenic 50.0%
GTGAGGGTTATCGGACTTTC+TGG + chr3_2:69595428-69595447 None:intergenic 50.0%
AAGTCCGATAACCCTCACTC+CGG - chr3_2:69595430-69595449 Msa0420830:three_prime_UTR 50.0%
AAGAGAGAAGAGAGCGAACC+CGG + chr3_2:69595470-69595489 None:intergenic 50.0%
AAATCCACGGGAACGCTTAG+TGG + chr3_2:69596384-69596403 None:intergenic 50.0%
ACTAAGCGTTCCCGTGGATT+TGG - chr3_2:69596383-69596402 Msa0420830:three_prime_UTR 50.0%
AGGGCACGTTCTTACAATGG+CGG - chr3_2:69596883-69596902 Msa0420830:CDS 50.0%
!! AGCGATTATGGTGGGTATGG+AGG - chr3_2:69597000-69597019 Msa0420830:CDS 50.0%
!! GATTATGGTGGGTATGGAGG+TGG - chr3_2:69597003-69597022 Msa0420830:CDS 50.0%
GGAGGTGGAGATGATTTCAG+TGG - chr3_2:69597018-69597037 Msa0420830:CDS 50.0%
GGTGGAGATGATTTCAGTGG+TGG - chr3_2:69597021-69597040 Msa0420830:CDS 50.0%
!!! GGTGGTTTTGGAGGTTATGG+AGG - chr3_2:69597039-69597058 Msa0420830:CDS 50.0%
TTTGGAGGTTATGGAGGCAG+TGG - chr3_2:69597045-69597064 Msa0420830:CDS 50.0%
CAGGAGGACCCTATTCTAGT+AGG - chr3_2:69597277-69597296 Msa0420830:CDS 50.0%
GGAGGACCCTATTCTAGTAG+GGG - chr3_2:69597279-69597298 Msa0420830:CDS 50.0%
TCTAGTAGGGGAGGTTATGG+GGG - chr3_2:69597291-69597310 Msa0420830:CDS 50.0%
! CACTTTTCTTCCCGAAGGGT+TGG - chr3_2:69597851-69597870 Msa0420830:CDS 50.0%
CCCCATATAGAACCCACTAG+AGG + chr3_2:69597999-69598018 None:intergenic 50.0%
! CGTTCTTGTGTTTGAGGTCC+AGG - chr3_2:69598682-69598701 Msa0420830:intron 50.0%
! TGGGAAGGGGGAACTGGTTT+GGG + chr3_2:69595360-69595379 None:intergenic 55.0%
AAACAGTGGGAAGGGGGAAC+TGG + chr3_2:69595366-69595385 None:intergenic 55.0%
TTCCCCCTTCCCACTGTTTC+AGG - chr3_2:69595367-69595386 Msa0420830:three_prime_UTR 55.0%
GACCTGAAACAGTGGGAAGG+GGG + chr3_2:69595372-69595391 None:intergenic 55.0%
AGAGAGAAGAGAGCGAACCC+GGG + chr3_2:69595469-69595488 None:intergenic 55.0%
CACGGGAACGCTTAGTGGTA+TGG + chr3_2:69596379-69596398 None:intergenic 55.0%
CATACCACTAAGCGTTCCCG+TGG - chr3_2:69596377-69596396 Msa0420830:three_prime_UTR 55.0%
!! AGGTCGCTTGGAGGTTTTGG+TGG - chr3_2:69596970-69596989 Msa0420830:CDS 55.0%
!! CGCTTGGAGGTTTTGGTGGT+AGG - chr3_2:69596974-69596993 Msa0420830:CDS 55.0%
!! TGGTGGTGCTGGTGGTTATG+CGG - chr3_2:69597065-69597084 Msa0420830:CDS 55.0%
! GGTGGTTATGCGGGCTATAG+AGG - chr3_2:69597075-69597094 Msa0420830:CDS 55.0%
! GGTTATGCGGGCTATAGAGG+AGG - chr3_2:69597078-69597097 Msa0420830:CDS 55.0%
TTCGGTTACTCTGGCCGCTA+TGG - chr3_2:69597111-69597130 Msa0420830:CDS 55.0%
TGGCCGCTATGGATCCTACA+TGG - chr3_2:69597122-69597141 Msa0420830:CDS 55.0%
GGCCGCTATGGATCCTACAT+GGG - chr3_2:69597123-69597142 Msa0420830:CDS 55.0%
GCCGCTATGGATCCTACATG+GGG - chr3_2:69597124-69597143 Msa0420830:CDS 55.0%
CCCCCATGTAGGATCCATAG+CGG + chr3_2:69597128-69597147 None:intergenic 55.0%
CCGCTATGGATCCTACATGG+GGG - chr3_2:69597125-69597144 Msa0420830:CDS 55.0%
CGCTATGGATCCTACATGGG+GGG - chr3_2:69597126-69597145 Msa0420830:CDS 55.0%
CACCACCATATCCACCACCA+AGG + chr3_2:69597152-69597171 None:intergenic 55.0%
!! CTTGGTGGTGGATATGGTGG+TGG - chr3_2:69597150-69597169 Msa0420830:CDS 55.0%
!! GTGGTGGATATGGTGGTGGT+GGG - chr3_2:69597154-69597173 Msa0420830:CDS 55.0%
!! GGATATGGTGGTGGTGGGTT+AGG - chr3_2:69597159-69597178 Msa0420830:CDS 55.0%
!! GTGGTGGGTTAGGCCCATAT+GGG - chr3_2:69597169-69597188 Msa0420830:CDS 55.0%
TTAGGCCCATATGGGAGAGG+TGG - chr3_2:69597177-69597196 Msa0420830:CDS 55.0%
TATGGCGGTTATGGTGGTCC+AGG - chr3_2:69597207-69597226 Msa0420830:CDS 55.0%
TCATAACCTCCACCAGTGCC+TGG + chr3_2:69597228-69597247 None:intergenic 55.0%
GGAGGTTATGAATCTGGCCC+TGG - chr3_2:69597237-69597256 Msa0420830:CDS 55.0%
TATGAATCTGGCCCTGGTGC+TGG - chr3_2:69597243-69597262 Msa0420830:CDS 55.0%
TCCCACCAAAACCAGCACCA+GGG + chr3_2:69597257-69597276 None:intergenic 55.0%
GGACCCTATTCTAGTAGGGG+AGG - chr3_2:69597282-69597301 Msa0420830:CDS 55.0%
!! GGGAAGGGGGAACTGGTTTG+GGG + chr3_2:69595359-69595378 None:intergenic 60.0%
GTGGGAAGGGGGAACTGGTT+TGG + chr3_2:69595361-69595380 None:intergenic 60.0%
GTCGCCGGAGTGAGGGTTAT+CGG + chr3_2:69595437-69595456 None:intergenic 60.0%
GATAACCCTCACTCCGGCGA+CGG - chr3_2:69595436-69595455 Msa0420830:three_prime_UTR 60.0%
ACCGGTCGTCCTCGAGGATT+TGG - chr3_2:69595755-69595774 Msa0420830:three_prime_UTR 60.0%
CCCAAATCCTCGAGGACGAC+CGG + chr3_2:69595759-69595778 None:intergenic 60.0%
CCGGTCGTCCTCGAGGATTT+GGG - chr3_2:69595756-69595775 Msa0420830:three_prime_UTR 60.0%
GTAGGGCCATAACCTCCAGC+AGG + chr3_2:69596943-69596962 None:intergenic 60.0%
GGAGGTTATGGAGGCAGTGG+TGG - chr3_2:69597048-69597067 Msa0420830:CDS 60.0%
! TATGGAGGCAGTGGTGGTGC+TGG - chr3_2:69597054-69597073 Msa0420830:CDS 60.0%
!! GGTGGTGCTGGTGGTTATGC+GGG - chr3_2:69597066-69597085 Msa0420830:CDS 60.0%
GCGGCCAGAGTAACCGAATG+AGG + chr3_2:69597109-69597128 None:intergenic 60.0%
!! GGCCTTGGTGGTGGATATGG+TGG - chr3_2:69597147-69597166 Msa0420830:CDS 60.0%
!! GGTGGTGGATATGGTGGTGG+TGG - chr3_2:69597153-69597172 Msa0420830:CDS 60.0%
!! GGTGGTGGGTTAGGCCCATA+TGG - chr3_2:69597168-69597187 Msa0420830:CDS 60.0%
GGGTTAGGCCCATATGGGAG+AGG - chr3_2:69597174-69597193 Msa0420830:CDS 60.0%
GCCCATATGGGAGAGGTGGT+GGG - chr3_2:69597181-69597200 Msa0420830:CDS 60.0%
CCCCACCACCTCTCCCATAT+GGG + chr3_2:69597185-69597204 None:intergenic 60.0%
CCCATATGGGAGAGGTGGTG+GGG - chr3_2:69597182-69597201 Msa0420830:CDS 60.0%
! CCATATGGGAGAGGTGGTGG+GGG - chr3_2:69597183-69597202 Msa0420830:CDS 60.0%
GGTTATGGTGGTCCAGGCAC+TGG - chr3_2:69597213-69597232 Msa0420830:CDS 60.0%
!! TATGGTGGTCCAGGCACTGG+TGG - chr3_2:69597216-69597235 Msa0420830:CDS 60.0%
!!! TCTGGCCCTGGTGCTGGTTT+TGG - chr3_2:69597249-69597268 Msa0420830:CDS 60.0%
!!! GCCCTGGTGCTGGTTTTGGT+GGG - chr3_2:69597253-69597272 Msa0420830:CDS 60.0%
GTCCCACCAAAACCAGCACC+AGG + chr3_2:69597258-69597277 None:intergenic 60.0%
!!! GGTGCTGGTTTTGGTGGGAC+AGG - chr3_2:69597258-69597277 Msa0420830:CDS 60.0%
!!! GCTGGTTTTGGTGGGACAGG+AGG - chr3_2:69597261-69597280 Msa0420830:CDS 60.0%
GAAGAGAGCGAACCCGGGAC+TGG + chr3_2:69595464-69595483 None:intergenic 65.0%
CGACATACCGGTCGTCCTCG+AGG - chr3_2:69595749-69595768 Msa0420830:three_prime_UTR 65.0%
GGATCCTACATGGGGGGCCT+TGG - chr3_2:69597132-69597151 Msa0420830:CDS 65.0%
TCCTACATGGGGGGCCTTGG+TGG - chr3_2:69597135-69597154 Msa0420830:CDS 65.0%
ACCACCAAGGCCCCCCATGT+AGG + chr3_2:69597139-69597158 None:intergenic 65.0%
TACATGGGGGGCCTTGGTGG+TGG - chr3_2:69597138-69597157 Msa0420830:CDS 65.0%
!! GGGGGCCTTGGTGGTGGATA+TGG - chr3_2:69597144-69597163 Msa0420830:CDS 65.0%
GGCCCATATGGGAGAGGTGG+TGG - chr3_2:69597180-69597199 Msa0420830:CDS 65.0%
CCCCCACCACCTCTCCCATA+TGG + chr3_2:69597186-69597205 None:intergenic 65.0%
!! AGAGGTGGTGGGGGCTATGG+CGG - chr3_2:69597192-69597211 Msa0420830:CDS 65.0%
GGTGGGGGCTATGGCGGTTA+TGG - chr3_2:69597198-69597217 Msa0420830:CDS 65.0%
GGGGGCTATGGCGGTTATGG+TGG - chr3_2:69597201-69597220 Msa0420830:CDS 65.0%
!!! GGCCCTGGTGCTGGTTTTGG+TGG - chr3_2:69597252-69597271 Msa0420830:CDS 65.0%
! GGAGGCAGTGGTGGTGCTGG+TGG - chr3_2:69597057-69597076 Msa0420830:CDS 70.0%
!! GGGAGAGGTGGTGGGGGCTA+TGG - chr3_2:69597189-69597208 Msa0420830:CDS 70.0%
!! GGTGGTCCAGGCACTGGTGG+AGG - chr3_2:69597219-69597238 Msa0420830:CDS 70.0%
TGGCGCCGTCGCCGGAGTGA+GGG + chr3_2:69595444-69595463 None:intergenic 75.0%
! CTGGCGCCGTCGCCGGAGTG+AGG + chr3_2:69595445-69595464 None:intergenic 80.0%
! TCCGGCGACGGCGCCAGTCC+CGG - chr3_2:69595448-69595467 Msa0420830:three_prime_UTR 80.0%
!! CCCGGGACTGGCGCCGTCGC+CGG + chr3_2:69595452-69595471 None:intergenic 85.0%
! CCGGCGACGGCGCCAGTCCC+GGG - chr3_2:69595449-69595468 Msa0420830:three_prime_UTR 85.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 69595321 69598882 69595321 ID=Msa0420830;Name=Msa0420830
chr3_2 mRNA 69595321 69598882 69595321 ID=Msa0420830-mRNA-1;Parent=Msa0420830;Name=Msa0420830-mRNA-1;_AED=0.08;_eAED=0.08;_QI=97|1|1|1|1|1|6|1538|353
chr3_2 exon 69595321 69597392 69595321 ID=Msa0420830-mRNA-1:exon:16603;Parent=Msa0420830-mRNA-1
chr3_2 exon 69597719 69597888 69597719 ID=Msa0420830-mRNA-1:exon:16602;Parent=Msa0420830-mRNA-1
chr3_2 exon 69598138 69598237 69598138 ID=Msa0420830-mRNA-1:exon:16601;Parent=Msa0420830-mRNA-1
chr3_2 exon 69598353 69598516 69598353 ID=Msa0420830-mRNA-1:exon:16600;Parent=Msa0420830-mRNA-1
chr3_2 exon 69598604 69598644 69598604 ID=Msa0420830-mRNA-1:exon:16599;Parent=Msa0420830-mRNA-1
chr3_2 exon 69598733 69598882 69598733 ID=Msa0420830-mRNA-1:exon:16598;Parent=Msa0420830-mRNA-1
chr3_2 five_prime_UTR 69598786 69598882 69598786 ID=Msa0420830-mRNA-1:five_prime_utr;Parent=Msa0420830-mRNA-1
chr3_2 CDS 69598733 69598785 69598733 ID=Msa0420830-mRNA-1:cds;Parent=Msa0420830-mRNA-1
chr3_2 CDS 69598604 69598644 69598604 ID=Msa0420830-mRNA-1:cds;Parent=Msa0420830-mRNA-1
chr3_2 CDS 69598353 69598516 69598353 ID=Msa0420830-mRNA-1:cds;Parent=Msa0420830-mRNA-1
chr3_2 CDS 69598138 69598237 69598138 ID=Msa0420830-mRNA-1:cds;Parent=Msa0420830-mRNA-1
chr3_2 CDS 69597719 69597888 69597719 ID=Msa0420830-mRNA-1:cds;Parent=Msa0420830-mRNA-1
chr3_2 CDS 69596859 69597392 69596859 ID=Msa0420830-mRNA-1:cds;Parent=Msa0420830-mRNA-1
chr3_2 three_prime_UTR 69595321 69596858 69595321 ID=Msa0420830-mRNA-1:three_prime_utr;Parent=Msa0420830-mRNA-1
Gene Sequence

>Msa0420830

ATGGCTTCCAGAAAGTCCGATAACCCTCACTCCGGCGACGGCGCCAGTCCCGGGAAAATCTTCATCGGAGGTTTAGCCAAAGATACAACCCTAGAGACTTTTGTGAAGTACTTTGAAAGGTATGGGGAGATAACTGATTCCGTTATCATGAAGGATCGACATACCGGTCGTCCTCGAGGATTTGGGTTTATCACTTATGCGGATGCTTCTGTTGTTGATCAAGTTATTCAGGAGAATCACATCATCAATGACAAGCAGGTTGAAATCAAGAGGACTATTCCAAAGGGTGCATCTCAAACTAATGACTTCAAAACTAAGAAGATTTTTGTTGGTGGCATTCCAGCAACTGTATCTGAAGATGAGCTCAAGAACTTCTTCTCAAAGCATGGGAATGTTATGGAGCACGAGATCATACGCGACCATACCACTAAGCGTTCCCGTGGATTTGGTTTTGTAGTTTTTGATAGCGATAAGGCCGTTGATAATTTGTTAGCTGATGGGAACATGATTGATATGGATGGTACTCAGGTTGAGATCAAGAAGGCTGAACCAAAGAAATCTTCAAATTCATCTTCTTTTCCTTCATTTGGTAGTGATTCTAGGGCACGTTCTTACAATGGCGGTTTTGGTGGATTTGACGATTCTTATGGAAGTTTTCCTGCTGGAGGTTATGGCCCTACATCTTATAGGTCGCTTGGAGGTTTTGGTGGTAGGTTTAGCGATTATGGTGGGTATGGAGGTGGAGATGATTTCAGTGGTGGTTTTGGAGGTTATGGAGGCAGTGGTGGTGCTGGTGGTTATGCGGGCTATAGAGGAGGAGAATCCTCATTCGGTTACTCTGGCCGCTATGGATCCTACATGGGGGGCCTTGGTGGTGGATATGGTGGTGGTGGGTTAGGCCCATATGGGAGAGGTGGTGGGGGCTATGGCGGTTATGGTGGTCCAGGCACTGGTGGAGGTTATGAATCTGGCCCTGGTGCTGGTTTTGGTGGGACAGGAGGACCCTATTCTAGTAGGGGAGGTTATGGGGGCAGTAGTCGTTACCATCCTTACACAAGATAG
Protein sequence

>Msa0420830

MASRKSDNPHSGDGASPGKIFIGGLAKDTTLETFVKYFERYGEITDSVIMKDRHTGRPRGFGFITYADASVVDQVIQENHIINDKQVEIKRTIPKGASQTNDFKTKKIFVGGIPATVSEDELKNFFSKHGNVMEHEIIRDHTTKRSRGFGFVVFDSDKAVDNLLADGNMIDMDGTQVEIKKAEPKKSSNSSSFPSFGSDSRARSYNGGFGGFDDSYGSFPAGGYGPTSYRSLGGFGGRFSDYGGYGGGDDFSGGFGGYGGSGGAGGYAGYRGGESSFGYSGRYGSYMGGLGGGYGGGGLGPYGRGGGGYGGYGGPGTGGGYESGPGAGFGGTGGPYSSRGGYGGSSRYHPYTR*