Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0256570 | XP_013464732.1 | 96.838 | 253 | 8 | 0 | 1 | 253 | 1 | 253 | 0.0 | 511 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0256570 | sp|P24805|TSJT1_TOBAC | 40.940 | 149 | 87 | 1 | 1 | 149 | 1 | 148 | 2.13e-32 | 119 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0256570 | B7FHV5 | 96.838 | 253 | 8 | 0 | 1 | 253 | 1 | 253 | 0.0 | 511 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0186540 | Msa0256570 | 0.844345 | 8.008092e-59 | -8.615850e-47 |
| Msa0216370 | Msa0256570 | 0.892144 | 2.080321e-74 | -8.615850e-47 |
| Msa0225420 | Msa0256570 | 0.819957 | 8.840130e-53 | -8.615850e-47 |
| Msa0225720 | Msa0256570 | 0.815544 | 8.756625e-52 | -8.615850e-47 |
| Msa0256570 | Msa0295710 | 0.977150 | 3.296953e-143 | -8.615850e-47 |
| Msa0256570 | Msa0301260 | 0.832772 | 7.811974e-56 | -8.615850e-47 |
| Msa0256570 | Msa0334300 | 0.960429 | 1.510056e-118 | -8.615850e-47 |
| Msa0256570 | Msa0385740 | 0.854775 | 9.834865e-62 | -8.615850e-47 |
| Msa0256570 | Msa0420830 | 0.804847 | 1.774611e-49 | -8.615850e-47 |
| Msa0256570 | Msa0549530 | 0.838443 | 2.866621e-57 | -8.615850e-47 |
| Msa0256570 | Msa0578410 | 0.806833 | 6.787696e-50 | -8.615850e-47 |
| Msa0256570 | Msa0603230 | 0.831647 | 1.482554e-55 | -8.615850e-47 |
| Msa0256570 | Msa0645880 | 0.855289 | 6.971944e-62 | -8.615850e-47 |
| Msa0256570 | Msa0685730 | 0.842694 | 2.211612e-58 | -8.615850e-47 |
| Msa0256570 | Msa0713900 | -0.808268 | 3.366979e-50 | -8.615850e-47 |
| Msa0256570 | Msa0776140 | 0.805284 | 1.437722e-49 | -8.615850e-47 |
| Msa0256570 | Msa0776150 | 0.809241 | 2.085280e-50 | -8.615850e-47 |
| Msa0256570 | Msa0776170 | 0.809177 | 2.152269e-50 | -8.615850e-47 |
| Msa0256570 | Msa0776560 | 0.857882 | 1.205937e-62 | -8.615850e-47 |
| Msa0256570 | Msa0859120 | 0.836379 | 9.687248e-57 | -8.615850e-47 |
| Msa0256570 | Msa1269440 | 0.884347 | 2.072020e-71 | -8.615850e-47 |
| Msa0256570 | Msa1335090 | 0.832724 | 8.030641e-56 | -8.615850e-47 |
| Msa0256570 | Msa1339020 | 0.832920 | 7.175270e-56 | -8.615850e-47 |
| Msa0256570 | Msa1358720 | -0.802318 | 5.938208e-49 | -8.615850e-47 |
| Msa0256570 | Msa1422480 | 0.805297 | 1.429134e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0256570 | MtrunA17_Chr2g0317901 | 96.838 | 253 | 8 | 0 | 1 | 253 | 1 | 253 | 0.0 | 511 |
| Msa0256570 | MtrunA17_Chr2g0281901 | 65.600 | 250 | 85 | 1 | 1 | 250 | 1 | 249 | 8.34e-116 | 332 |
| Msa0256570 | MtrunA17_Chr4g0047531 | 60.558 | 251 | 98 | 1 | 1 | 250 | 64 | 314 | 1.57e-105 | 308 |
| Msa0256570 | MtrunA17_Chr1g0166351 | 47.012 | 251 | 124 | 4 | 1 | 247 | 1 | 246 | 5.10e-76 | 231 |
| Msa0256570 | MtrunA17_Chr1g0204611 | 47.222 | 252 | 122 | 5 | 1 | 247 | 1 | 246 | 1.12e-75 | 230 |
| Msa0256570 | MtrunA17_Chr2g0287871 | 40.948 | 232 | 130 | 5 | 1 | 230 | 1 | 227 | 1.38e-53 | 173 |
| Msa0256570 | MtrunA17_Chr4g0065571 | 39.056 | 233 | 134 | 6 | 1 | 230 | 1 | 228 | 7.52e-53 | 171 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0256570 | AT4G27450.1 | 78.226 | 248 | 53 | 1 | 1 | 247 | 1 | 248 | 8.92e-146 | 408 |
| Msa0256570 | AT3G15450.1 | 68.675 | 249 | 74 | 3 | 1 | 247 | 1 | 247 | 2.31e-124 | 353 |
| Msa0256570 | AT3G15450.2 | 66.839 | 193 | 60 | 3 | 1 | 191 | 1 | 191 | 3.99e-88 | 260 |
| Msa0256570 | AT5G43830.1 | 48.413 | 252 | 120 | 4 | 1 | 247 | 1 | 247 | 1.72e-78 | 237 |
| Msa0256570 | AT3G15450.3 | 64.286 | 182 | 58 | 4 | 1 | 180 | 1 | 177 | 2.46e-74 | 224 |
| Msa0256570 | AT3G22850.1 | 44.939 | 247 | 133 | 1 | 1 | 247 | 1 | 244 | 5.28e-73 | 223 |
| Msa0256570 | AT5G19140.1 | 42.241 | 232 | 127 | 5 | 1 | 230 | 1 | 227 | 3.31e-55 | 177 |
| Msa0256570 | AT5G19140.3 | 48.521 | 169 | 84 | 2 | 63 | 230 | 25 | 191 | 5.81e-50 | 163 |
| Msa0256570 | AT5G19140.2 | 39.655 | 232 | 121 | 6 | 1 | 230 | 1 | 215 | 3.45e-47 | 156 |
Find 77 sgRNAs with CRISPR-Local
Find 258 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCTTAGAGCTTAAGATTT+TGG | 0.158220 | 2_2:+51405464 | Msa0256570:five_prime_UTR |
| AACCTTTGATGAAGAGAAAA+AGG | 0.230736 | 2_2:-51405691 | None:intergenic |
| TGTTTCTGATTGAAGCTTAT+AGG | 0.236090 | 2_2:+51406257 | Msa0256570:CDS |
| ACAACTTGATCTGGTGGATA+TGG | 0.300897 | 2_2:-51406298 | None:intergenic |
| TCCTTACTGAACAAGCAATA+TGG | 0.322158 | 2_2:+51406208 | Msa0256570:CDS |
| TGACATATACAGCTTGTTCT+TGG | 0.334278 | 2_2:+51406168 | Msa0256570:CDS |
| GCAGGGCTATTCAGCTCTTC+AGG | 0.347531 | 2_2:-51405538 | None:intergenic |
| TGGTGGATTGAAGTTGTATT+GGG | 0.352740 | 2_2:+51406498 | Msa0256570:CDS |
| TTCATAGAACAAGTATTATC+AGG | 0.367478 | 2_2:-51405628 | None:intergenic |
| GACATATACAGCTTGTTCTT+GGG | 0.373171 | 2_2:+51406169 | Msa0256570:CDS |
| GATGTGTGGGGCCAACTTTA+AGG | 0.380784 | 2_2:+51407092 | Msa0256570:CDS |
| TTTAAGCCTTTGTATGATGC+AGG | 0.380881 | 2_2:-51405556 | None:intergenic |
| AATACTTGTTCTATGAACTT+TGG | 0.381957 | 2_2:+51405634 | Msa0256570:CDS |
| AACCCTCTTGTACAACATTA+AGG | 0.386014 | 2_2:-51406558 | None:intergenic |
| GTTGTTTATGACAGCACATA+TGG | 0.386283 | 2_2:+51406349 | Msa0256570:CDS |
| TTGCTCCCATTCCATCCAAT+TGG | 0.404613 | 2_2:-51407163 | None:intergenic |
| ATGGTGGATTGAAGTTGTAT+TGG | 0.415848 | 2_2:+51406497 | Msa0256570:CDS |
| CAAGTTGTTAAGGAACTTGA+TGG | 0.416575 | 2_2:+51406313 | Msa0256570:CDS |
| TATTGGGGTATTGCCGCTGA+TGG | 0.425828 | 2_2:+51406514 | Msa0256570:CDS |
| CAAACACAGGAAACCGAAAC+AGG | 0.425940 | 2_2:-51407316 | None:intergenic |
| TCCACCAGATCAAGTTGTTA+AGG | 0.433324 | 2_2:+51406303 | Msa0256570:CDS |
| CTTGTTGCTCAGAAGGAAAC+AGG | 0.435957 | 2_2:-51407348 | None:intergenic |
| AGAATTTCTTCAGAAAGCTT+AGG | 0.436367 | 2_2:-51405583 | None:intergenic |
| AGTTCCTTAACAACTTGATC+TGG | 0.448722 | 2_2:-51406307 | None:intergenic |
| ACCATATTGCTTGTTCAGTA+AGG | 0.461779 | 2_2:-51406209 | None:intergenic |
| GAACTTATCAACCTTAAAGT+TGG | 0.462511 | 2_2:-51407103 | None:intergenic |
| AAGGTAAGGTAGGTGGTGGT+AGG | 0.464791 | 2_2:-51407277 | None:intergenic |
| GTGAATCCAATTGGATGGAA+TGG | 0.469235 | 2_2:+51407157 | Msa0256570:CDS |
| GTGGATGAGCAAGACCTTTG+TGG | 0.473208 | 2_2:-51405516 | None:intergenic |
| ATTGCCTTCAACTTGTTCAA+TGG | 0.480350 | 2_2:-51407045 | None:intergenic |
| AGGACAAATTCAAAAGGATA+AGG | 0.482557 | 2_2:-51407296 | None:intergenic |
| GCATCCATTGAACAAGTTGA+AGG | 0.484376 | 2_2:+51407041 | Msa0256570:CDS |
| TTACTTAGTATTGAATATGA+AGG | 0.487265 | 2_2:-51405430 | None:intergenic |
| ATACTACCTTGTTGCTCAGA+AGG | 0.492421 | 2_2:-51407355 | None:intergenic |
| CAAGCAATATGGTTTGTCAA+AGG | 0.499784 | 2_2:+51406219 | Msa0256570:CDS |
| ACTCCTTCACTGTCTATCCT+TGG | 0.503821 | 2_2:-51407069 | None:intergenic |
| CAATTGATACCTGCTGGAAA+AGG | 0.504528 | 2_2:-51406598 | None:intergenic |
| AAGCAATATGGTTTGTCAAA+GGG | 0.505741 | 2_2:+51406220 | Msa0256570:CDS |
| TCAAAAGGATAAGGTAAGGT+AGG | 0.506006 | 2_2:-51407287 | None:intergenic |
| CGAAACAGGACAAATTCAAA+AGG | 0.508229 | 2_2:-51407302 | None:intergenic |
| TGAATCCAATTGGATGGAAT+GGG | 0.508806 | 2_2:+51407158 | Msa0256570:CDS |
| TTTATGCAGGGTTCTGATGG+TGG | 0.519132 | 2_2:+51406481 | Msa0256570:intron |
| TCTTAGCTAAAACGAGAGAA+AGG | 0.524453 | 2_2:-51407382 | None:intergenic |
| TCCTTAACAACTTGATCTGG+TGG | 0.527113 | 2_2:-51406304 | None:intergenic |
| AAGGTAGGTGGTGGTAGGGT+TGG | 0.534755 | 2_2:-51407272 | None:intergenic |
| ACATATACAGCTTGTTCTTG+GGG | 0.539505 | 2_2:+51406170 | Msa0256570:CDS |
| TTAAGCCTTTGTATGATGCA+GGG | 0.539695 | 2_2:-51405555 | None:intergenic |
| TGTATGTTTCATAGTGAAGG+AGG | 0.544867 | 2_2:+51407003 | Msa0256570:CDS |
| GAGTTGGTAGTGAATCCAAT+TGG | 0.553165 | 2_2:+51407148 | Msa0256570:CDS |
| AGGTAAGGTAGGTGGTGGTA+GGG | 0.555732 | 2_2:-51407276 | None:intergenic |
| GGATAAGGTAAGGTAGGTGG+TGG | 0.560207 | 2_2:-51407281 | None:intergenic |
| TGGTAGTGAATCCAATTGGA+TGG | 0.564629 | 2_2:+51407152 | Msa0256570:CDS |
| ATTGGGGTATTGCCGCTGAT+GGG | 0.568391 | 2_2:+51406515 | Msa0256570:CDS |
| GTCAACAGTATTCCTCGAGT+TGG | 0.573016 | 2_2:+51407132 | Msa0256570:CDS |
| GGGTGTATGTTTCATAGTGA+AGG | 0.585970 | 2_2:+51407000 | Msa0256570:intron |
| GTGGATATGGACCACGGTCA+CGG | 0.586213 | 2_2:-51406285 | None:intergenic |
| CTGTTTCCTTCTGAGCAACA+AGG | 0.587166 | 2_2:+51407349 | Msa0256570:three_prime_UTR |
| GGGCTATTCAGCTCTTCAGG+TGG | 0.589074 | 2_2:-51405535 | None:intergenic |
| ACCTGCTGGAAAAGGAGCAA+AGG | 0.590844 | 2_2:-51406590 | None:intergenic |
| TGACCTTAATGTTGTACAAG+AGG | 0.595852 | 2_2:+51406555 | Msa0256570:CDS |
| AAATTCAAAAGGATAAGGTA+AGG | 0.599797 | 2_2:-51407291 | None:intergenic |
| CAGGAAAACTACACAAACAC+AGG | 0.599806 | 2_2:-51407329 | None:intergenic |
| GGTGGATTGAAGTTGTATTG+GGG | 0.606006 | 2_2:+51406499 | Msa0256570:CDS |
| GACAGTGAAGGAGTGATGTG+TGG | 0.622107 | 2_2:+51407078 | Msa0256570:CDS |
| ACAGTGAAGGAGTGATGTGT+GGG | 0.629204 | 2_2:+51407079 | Msa0256570:CDS |
| AATAGCCCTGCATCATACAA+AGG | 0.630008 | 2_2:+51405550 | Msa0256570:CDS |
| AAAGGATAAGGTAAGGTAGG+TGG | 0.633343 | 2_2:-51407284 | None:intergenic |
| ATAAGCTTCAATCAGAAACA+TGG | 0.642892 | 2_2:-51406254 | None:intergenic |
| ACAAGTTGAAGGCAATGCCA+AGG | 0.645708 | 2_2:+51407052 | Msa0256570:CDS |
| TGTGCTGTCATAAACAACAA+AGG | 0.658420 | 2_2:-51406344 | None:intergenic |
| TATAGGACACTCCGTGACCG+TGG | 0.676131 | 2_2:+51406274 | Msa0256570:CDS |
| ATGCCAAGGATAGACAGTGA+AGG | 0.681425 | 2_2:+51407066 | Msa0256570:CDS |
| GACCTTAATGTTGTACAAGA+GGG | 0.690369 | 2_2:+51406556 | Msa0256570:CDS |
| TTGGATTCACTACCAACTCG+AGG | 0.697059 | 2_2:-51407144 | None:intergenic |
| GATCACAACAGACCCATCAG+CGG | 0.715155 | 2_2:-51406527 | None:intergenic |
| GATCTGGTGGATATGGACCA+CGG | 0.727078 | 2_2:-51406291 | None:intergenic |
| CAGTGAAGGAGTGATGTGTG+GGG | 0.800044 | 2_2:+51407080 | Msa0256570:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTTTTAACTCTAAATA+CGG | - | chr2_2:51406829-51406848 | None:intergenic | 10.0% |
| !!! | TATTTTTTTAACTCTAAATA+CGG | - | chr2_2:51406829-51406848 | None:intergenic | 10.0% |
| !!! | GTACACTTTTTTTTTTTTTT+TGG | + | chr2_2:51405755-51405774 | Msa0256570:intron | 15.0% |
| !!! | ATTTTGTTTTCAAGATAAAT+GGG | - | chr2_2:51406641-51406660 | None:intergenic | 15.0% |
| !! | GTAAATACATAAAAACTTTA+TGG | + | chr2_2:51407200-51407219 | Msa0256570:three_prime_UTR | 15.0% |
| !!! | GTACACTTTTTTTTTTTTTT+TGG | + | chr2_2:51405755-51405774 | Msa0256570:intron | 15.0% |
| !!! | ATTTTGTTTTCAAGATAAAT+GGG | - | chr2_2:51406641-51406660 | None:intergenic | 15.0% |
| !! | GTAAATACATAAAAACTTTA+TGG | + | chr2_2:51407200-51407219 | Msa0256570:three_prime_UTR | 15.0% |
| !! | TGAATATGAAGGATTAAAAA+TGG | - | chr2_2:51405422-51405441 | None:intergenic | 20.0% |
| !!! | TTACTTAGTATTGAATATGA+AGG | - | chr2_2:51405433-51405452 | None:intergenic | 20.0% |
| !!! | CATCTTTAATTCCTTTTATA+AGG | + | chr2_2:51405887-51405906 | Msa0256570:intron | 20.0% |
| !!! | GATTTTGTTTTCAAGATAAA+TGG | - | chr2_2:51406642-51406661 | None:intergenic | 20.0% |
| !! | AAAACAAAATCTCTTCAAAT+TGG | + | chr2_2:51406651-51406670 | Msa0256570:intron | 20.0% |
| !! | TTTGTTAGATCAATATGATA+CGG | + | chr2_2:51406788-51406807 | Msa0256570:intron | 20.0% |
| !!! | TTTTTAAAATCATTGAATGC+AGG | + | chr2_2:51406979-51406998 | Msa0256570:intron | 20.0% |
| !!! | TTTTAAAATCATTGAATGCA+GGG | + | chr2_2:51406980-51406999 | Msa0256570:intron | 20.0% |
| !!! | TATACATGTAAGAAGTTTTT+AGG | + | chr2_2:51407409-51407428 | Msa0256570:three_prime_UTR | 20.0% |
| !! | TGAATATGAAGGATTAAAAA+TGG | - | chr2_2:51405422-51405441 | None:intergenic | 20.0% |
| !!! | TTACTTAGTATTGAATATGA+AGG | - | chr2_2:51405433-51405452 | None:intergenic | 20.0% |
| !!! | CATCTTTAATTCCTTTTATA+AGG | + | chr2_2:51405887-51405906 | Msa0256570:intron | 20.0% |
| !!! | GATTTTGTTTTCAAGATAAA+TGG | - | chr2_2:51406642-51406661 | None:intergenic | 20.0% |
| !! | AAAACAAAATCTCTTCAAAT+TGG | + | chr2_2:51406651-51406670 | Msa0256570:intron | 20.0% |
| !! | TTTGTTAGATCAATATGATA+CGG | + | chr2_2:51406788-51406807 | Msa0256570:intron | 20.0% |
| !!! | TTTTTAAAATCATTGAATGC+AGG | + | chr2_2:51406979-51406998 | Msa0256570:intron | 20.0% |
| !!! | TTTTAAAATCATTGAATGCA+GGG | + | chr2_2:51406980-51406999 | Msa0256570:intron | 20.0% |
| !!! | TATACATGTAAGAAGTTTTT+AGG | + | chr2_2:51407409-51407428 | Msa0256570:three_prime_UTR | 20.0% |
| !! | TTTCTTAGAGCTTAAGATTT+TGG | + | chr2_2:51405464-51405483 | Msa0256570:five_prime_UTR | 25.0% |
| ! | GTGTAGAATCAAAAAAATGT+TGG | + | chr2_2:51405486-51405505 | Msa0256570:exon | 25.0% |
| ! | TTCATAGAACAAGTATTATC+AGG | - | chr2_2:51405631-51405650 | None:intergenic | 25.0% |
| ! | AATACTTGTTCTATGAACTT+TGG | + | chr2_2:51405634-51405653 | Msa0256570:CDS | 25.0% |
| ! | ACAGAATTCATCCTTATAAA+AGG | - | chr2_2:51405901-51405920 | None:intergenic | 25.0% |
| ! | TCCAACATAAAAGCTTAATA+TGG | + | chr2_2:51405920-51405939 | Msa0256570:intron | 25.0% |
| !! | ACCATATTAAGCTTTTATGT+TGG | - | chr2_2:51405924-51405943 | None:intergenic | 25.0% |
| ! | ATAAAAGCTTAATATGGTGT+AGG | + | chr2_2:51405926-51405945 | Msa0256570:intron | 25.0% |
| ! | AGAATTGTTAACAAAGAACA+TGG | - | chr2_2:51406421-51406440 | None:intergenic | 25.0% |
| !!! | ATGATGTTTGTTTTTTATGC+AGG | + | chr2_2:51406468-51406487 | Msa0256570:intron | 25.0% |
| !!! | TGATGTTTGTTTTTTATGCA+GGG | + | chr2_2:51406469-51406488 | Msa0256570:intron | 25.0% |
| ! | AAATTCAAAAGGATAAGGTA+AGG | - | chr2_2:51407294-51407313 | None:intergenic | 25.0% |
| !! | TTTCTTAGAGCTTAAGATTT+TGG | + | chr2_2:51405464-51405483 | Msa0256570:five_prime_UTR | 25.0% |
| ! | GTGTAGAATCAAAAAAATGT+TGG | + | chr2_2:51405486-51405505 | Msa0256570:exon | 25.0% |
| ! | TTCATAGAACAAGTATTATC+AGG | - | chr2_2:51405631-51405650 | None:intergenic | 25.0% |
| ! | AATACTTGTTCTATGAACTT+TGG | + | chr2_2:51405634-51405653 | Msa0256570:CDS | 25.0% |
| ! | ACAGAATTCATCCTTATAAA+AGG | - | chr2_2:51405901-51405920 | None:intergenic | 25.0% |
| ! | TCCAACATAAAAGCTTAATA+TGG | + | chr2_2:51405920-51405939 | Msa0256570:intron | 25.0% |
| !! | ACCATATTAAGCTTTTATGT+TGG | - | chr2_2:51405924-51405943 | None:intergenic | 25.0% |
| ! | ATAAAAGCTTAATATGGTGT+AGG | + | chr2_2:51405926-51405945 | Msa0256570:intron | 25.0% |
| ! | AGAATTGTTAACAAAGAACA+TGG | - | chr2_2:51406421-51406440 | None:intergenic | 25.0% |
| !!! | ATGATGTTTGTTTTTTATGC+AGG | + | chr2_2:51406468-51406487 | Msa0256570:intron | 25.0% |
| !!! | TGATGTTTGTTTTTTATGCA+GGG | + | chr2_2:51406469-51406488 | Msa0256570:intron | 25.0% |
| ! | AAATTCAAAAGGATAAGGTA+AGG | - | chr2_2:51407294-51407313 | None:intergenic | 25.0% |
| AAGGATTAAAAATGGAAGCA+GGG | - | chr2_2:51405414-51405433 | None:intergenic | 30.0% | |
| AGAATTTCTTCAGAAAGCTT+AGG | - | chr2_2:51405586-51405605 | None:intergenic | 30.0% | |
| AACCTTTGATGAAGAGAAAA+AGG | - | chr2_2:51405694-51405713 | None:intergenic | 30.0% | |
| TAACATAATACACATGTCTC+TGG | - | chr2_2:51405966-51405985 | None:intergenic | 30.0% | |
| ! | TTTTGTAGCAACCATGTTAT+TGG | - | chr2_2:51406079-51406098 | None:intergenic | 30.0% |
| !! | TATTTTTGCAGGTTGTTTTG+TGG | + | chr2_2:51406139-51406158 | Msa0256570:intron | 30.0% |
| !! | ATTTTTGCAGGTTGTTTTGT+GGG | + | chr2_2:51406140-51406159 | Msa0256570:intron | 30.0% |
| ! | AAGCAATATGGTTTGTCAAA+GGG | + | chr2_2:51406220-51406239 | Msa0256570:CDS | 30.0% |
| ATAAGCTTCAATCAGAAACA+TGG | - | chr2_2:51406257-51406276 | None:intergenic | 30.0% | |
| ! | TGTTTCTGATTGAAGCTTAT+AGG | + | chr2_2:51406257-51406276 | Msa0256570:CDS | 30.0% |
| ATTACATCATAACCAACATG+TGG | + | chr2_2:51406678-51406697 | Msa0256570:intron | 30.0% | |
| TAGATCAATATGATACGGTT+TGG | + | chr2_2:51406793-51406812 | Msa0256570:intron | 30.0% | |
| CACTTCAAACAAATTGTCAA+AGG | + | chr2_2:51406945-51406964 | Msa0256570:intron | 30.0% | |
| GAACTTATCAACCTTAAAGT+TGG | - | chr2_2:51407106-51407125 | None:intergenic | 30.0% | |
| AGGACAAATTCAAAAGGATA+AGG | - | chr2_2:51407299-51407318 | None:intergenic | 30.0% | |
| ! | CTTTTGAATTTGTCCTGTTT+CGG | + | chr2_2:51407303-51407322 | Msa0256570:three_prime_UTR | 30.0% |
| AAGGATTAAAAATGGAAGCA+GGG | - | chr2_2:51405414-51405433 | None:intergenic | 30.0% | |
| AGAATTTCTTCAGAAAGCTT+AGG | - | chr2_2:51405586-51405605 | None:intergenic | 30.0% | |
| AACCTTTGATGAAGAGAAAA+AGG | - | chr2_2:51405694-51405713 | None:intergenic | 30.0% | |
| TAACATAATACACATGTCTC+TGG | - | chr2_2:51405966-51405985 | None:intergenic | 30.0% | |
| ! | TTTTGTAGCAACCATGTTAT+TGG | - | chr2_2:51406079-51406098 | None:intergenic | 30.0% |
| !! | TATTTTTGCAGGTTGTTTTG+TGG | + | chr2_2:51406139-51406158 | Msa0256570:intron | 30.0% |
| !! | ATTTTTGCAGGTTGTTTTGT+GGG | + | chr2_2:51406140-51406159 | Msa0256570:intron | 30.0% |
| ! | AAGCAATATGGTTTGTCAAA+GGG | + | chr2_2:51406220-51406239 | Msa0256570:CDS | 30.0% |
| ATAAGCTTCAATCAGAAACA+TGG | - | chr2_2:51406257-51406276 | None:intergenic | 30.0% | |
| ! | TGTTTCTGATTGAAGCTTAT+AGG | + | chr2_2:51406257-51406276 | Msa0256570:CDS | 30.0% |
| ATTACATCATAACCAACATG+TGG | + | chr2_2:51406678-51406697 | Msa0256570:intron | 30.0% | |
| TAGATCAATATGATACGGTT+TGG | + | chr2_2:51406793-51406812 | Msa0256570:intron | 30.0% | |
| CACTTCAAACAAATTGTCAA+AGG | + | chr2_2:51406945-51406964 | Msa0256570:intron | 30.0% | |
| GAACTTATCAACCTTAAAGT+TGG | - | chr2_2:51407106-51407125 | None:intergenic | 30.0% | |
| AGGACAAATTCAAAAGGATA+AGG | - | chr2_2:51407299-51407318 | None:intergenic | 30.0% | |
| ! | CTTTTGAATTTGTCCTGTTT+CGG | + | chr2_2:51407303-51407322 | Msa0256570:three_prime_UTR | 30.0% |
| GAAGGATTAAAAATGGAAGC+AGG | - | chr2_2:51405415-51405434 | None:intergenic | 35.0% | |
| ! | ATGTTGGCAATTTTCCACAA+AGG | + | chr2_2:51405502-51405521 | Msa0256570:CDS | 35.0% |
| TTAAGCCTTTGTATGATGCA+GGG | - | chr2_2:51405558-51405577 | None:intergenic | 35.0% | |
| TTTAAGCCTTTGTATGATGC+AGG | - | chr2_2:51405559-51405578 | None:intergenic | 35.0% | |
| TGAAGAGAAAAAGGCTTATC+AGG | - | chr2_2:51405685-51405704 | None:intergenic | 35.0% | |
| ! | AGCCTTTTTCTCTTCATCAA+AGG | + | chr2_2:51405689-51405708 | Msa0256570:CDS | 35.0% |
| CTTAATATGGTGTAGGAGTA+TGG | + | chr2_2:51405933-51405952 | Msa0256570:intron | 35.0% | |
| GATGTTGCTGACAAAATTGA+AGG | + | chr2_2:51406028-51406047 | Msa0256570:intron | 35.0% | |
| ATGTTGTTAGTGCTAAGAGA+TGG | + | chr2_2:51406116-51406135 | Msa0256570:intron | 35.0% | |
| !! | CTAAGAGATGGTATTTTTGC+AGG | + | chr2_2:51406128-51406147 | Msa0256570:intron | 35.0% |
| ! | TGACATATACAGCTTGTTCT+TGG | + | chr2_2:51406168-51406187 | Msa0256570:CDS | 35.0% |
| ! | GACATATACAGCTTGTTCTT+GGG | + | chr2_2:51406169-51406188 | Msa0256570:CDS | 35.0% |
| ! | ACATATACAGCTTGTTCTTG+GGG | + | chr2_2:51406170-51406189 | Msa0256570:CDS | 35.0% |
| TCCTTACTGAACAAGCAATA+TGG | + | chr2_2:51406208-51406227 | Msa0256570:CDS | 35.0% | |
| ACCATATTGCTTGTTCAGTA+AGG | - | chr2_2:51406212-51406231 | None:intergenic | 35.0% | |
| ! | CAAGCAATATGGTTTGTCAA+AGG | + | chr2_2:51406219-51406238 | Msa0256570:CDS | 35.0% |
| AGTTCCTTAACAACTTGATC+TGG | - | chr2_2:51406310-51406329 | None:intergenic | 35.0% | |
| CAAGTTGTTAAGGAACTTGA+TGG | + | chr2_2:51406313-51406332 | Msa0256570:CDS | 35.0% | |
| TGTGCTGTCATAAACAACAA+AGG | - | chr2_2:51406347-51406366 | None:intergenic | 35.0% | |
| GTTGTTTATGACAGCACATA+TGG | + | chr2_2:51406349-51406368 | Msa0256570:CDS | 35.0% | |
| !!! | TTTTTTATGCAGGGTTCTGA+TGG | + | chr2_2:51406478-51406497 | Msa0256570:intron | 35.0% |
| !! | ATGGTGGATTGAAGTTGTAT+TGG | + | chr2_2:51406497-51406516 | Msa0256570:CDS | 35.0% |
| !! | TGGTGGATTGAAGTTGTATT+GGG | + | chr2_2:51406498-51406517 | Msa0256570:CDS | 35.0% |
| TGACCTTAATGTTGTACAAG+AGG | + | chr2_2:51406555-51406574 | Msa0256570:CDS | 35.0% | |
| GACCTTAATGTTGTACAAGA+GGG | + | chr2_2:51406556-51406575 | Msa0256570:CDS | 35.0% | |
| AACCCTCTTGTACAACATTA+AGG | - | chr2_2:51406561-51406580 | None:intergenic | 35.0% | |
| AATGATTGTTGGATCGAGAT+CGG | - | chr2_2:51406870-51406889 | None:intergenic | 35.0% | |
| GCTAACACATCAATGATTGT+TGG | - | chr2_2:51406881-51406900 | None:intergenic | 35.0% | |
| AAGTGTCTGAGTCTCTAATT+TGG | - | chr2_2:51406930-51406949 | None:intergenic | 35.0% | |
| TGTATGTTTCATAGTGAAGG+AGG | + | chr2_2:51407003-51407022 | Msa0256570:CDS | 35.0% | |
| ! | ATTGCCTTCAACTTGTTCAA+TGG | - | chr2_2:51407048-51407067 | None:intergenic | 35.0% |
| TGAATCCAATTGGATGGAAT+GGG | + | chr2_2:51407158-51407177 | Msa0256570:CDS | 35.0% | |
| TCAAAAGGATAAGGTAAGGT+AGG | - | chr2_2:51407290-51407309 | None:intergenic | 35.0% | |
| CGAAACAGGACAAATTCAAA+AGG | - | chr2_2:51407305-51407324 | None:intergenic | 35.0% | |
| TCTTAGCTAAAACGAGAGAA+AGG | - | chr2_2:51407385-51407404 | None:intergenic | 35.0% | |
| GAAGGATTAAAAATGGAAGC+AGG | - | chr2_2:51405415-51405434 | None:intergenic | 35.0% | |
| ! | ATGTTGGCAATTTTCCACAA+AGG | + | chr2_2:51405502-51405521 | Msa0256570:CDS | 35.0% |
| TTAAGCCTTTGTATGATGCA+GGG | - | chr2_2:51405558-51405577 | None:intergenic | 35.0% | |
| TTTAAGCCTTTGTATGATGC+AGG | - | chr2_2:51405559-51405578 | None:intergenic | 35.0% | |
| TGAAGAGAAAAAGGCTTATC+AGG | - | chr2_2:51405685-51405704 | None:intergenic | 35.0% | |
| ! | AGCCTTTTTCTCTTCATCAA+AGG | + | chr2_2:51405689-51405708 | Msa0256570:CDS | 35.0% |
| CTTAATATGGTGTAGGAGTA+TGG | + | chr2_2:51405933-51405952 | Msa0256570:intron | 35.0% | |
| GATGTTGCTGACAAAATTGA+AGG | + | chr2_2:51406028-51406047 | Msa0256570:intron | 35.0% | |
| ATGTTGTTAGTGCTAAGAGA+TGG | + | chr2_2:51406116-51406135 | Msa0256570:intron | 35.0% | |
| !! | CTAAGAGATGGTATTTTTGC+AGG | + | chr2_2:51406128-51406147 | Msa0256570:intron | 35.0% |
| ! | TGACATATACAGCTTGTTCT+TGG | + | chr2_2:51406168-51406187 | Msa0256570:CDS | 35.0% |
| ! | GACATATACAGCTTGTTCTT+GGG | + | chr2_2:51406169-51406188 | Msa0256570:CDS | 35.0% |
| ! | ACATATACAGCTTGTTCTTG+GGG | + | chr2_2:51406170-51406189 | Msa0256570:CDS | 35.0% |
| TCCTTACTGAACAAGCAATA+TGG | + | chr2_2:51406208-51406227 | Msa0256570:CDS | 35.0% | |
| ACCATATTGCTTGTTCAGTA+AGG | - | chr2_2:51406212-51406231 | None:intergenic | 35.0% | |
| ! | CAAGCAATATGGTTTGTCAA+AGG | + | chr2_2:51406219-51406238 | Msa0256570:CDS | 35.0% |
| AGTTCCTTAACAACTTGATC+TGG | - | chr2_2:51406310-51406329 | None:intergenic | 35.0% | |
| CAAGTTGTTAAGGAACTTGA+TGG | + | chr2_2:51406313-51406332 | Msa0256570:CDS | 35.0% | |
| TGTGCTGTCATAAACAACAA+AGG | - | chr2_2:51406347-51406366 | None:intergenic | 35.0% | |
| GTTGTTTATGACAGCACATA+TGG | + | chr2_2:51406349-51406368 | Msa0256570:CDS | 35.0% | |
| !!! | TTTTTTATGCAGGGTTCTGA+TGG | + | chr2_2:51406478-51406497 | Msa0256570:intron | 35.0% |
| !! | ATGGTGGATTGAAGTTGTAT+TGG | + | chr2_2:51406497-51406516 | Msa0256570:CDS | 35.0% |
| !! | TGGTGGATTGAAGTTGTATT+GGG | + | chr2_2:51406498-51406517 | Msa0256570:CDS | 35.0% |
| TGACCTTAATGTTGTACAAG+AGG | + | chr2_2:51406555-51406574 | Msa0256570:CDS | 35.0% | |
| GACCTTAATGTTGTACAAGA+GGG | + | chr2_2:51406556-51406575 | Msa0256570:CDS | 35.0% | |
| AACCCTCTTGTACAACATTA+AGG | - | chr2_2:51406561-51406580 | None:intergenic | 35.0% | |
| AATGATTGTTGGATCGAGAT+CGG | - | chr2_2:51406870-51406889 | None:intergenic | 35.0% | |
| GCTAACACATCAATGATTGT+TGG | - | chr2_2:51406881-51406900 | None:intergenic | 35.0% | |
| AAGTGTCTGAGTCTCTAATT+TGG | - | chr2_2:51406930-51406949 | None:intergenic | 35.0% | |
| TGTATGTTTCATAGTGAAGG+AGG | + | chr2_2:51407003-51407022 | Msa0256570:CDS | 35.0% | |
| ! | ATTGCCTTCAACTTGTTCAA+TGG | - | chr2_2:51407048-51407067 | None:intergenic | 35.0% |
| TGAATCCAATTGGATGGAAT+GGG | + | chr2_2:51407158-51407177 | Msa0256570:CDS | 35.0% | |
| TCAAAAGGATAAGGTAAGGT+AGG | - | chr2_2:51407290-51407309 | None:intergenic | 35.0% | |
| CGAAACAGGACAAATTCAAA+AGG | - | chr2_2:51407305-51407324 | None:intergenic | 35.0% | |
| TCTTAGCTAAAACGAGAGAA+AGG | - | chr2_2:51407385-51407404 | None:intergenic | 35.0% | |
| AATAGCCCTGCATCATACAA+AGG | + | chr2_2:51405550-51405569 | Msa0256570:CDS | 40.0% | |
| GTTTGCTTGAGCCAATAACA+TGG | + | chr2_2:51406065-51406084 | Msa0256570:intron | 40.0% | |
| ! | ACAACTTGATCTGGTGGATA+TGG | - | chr2_2:51406301-51406320 | None:intergenic | 40.0% |
| ! | TCCACCAGATCAAGTTGTTA+AGG | + | chr2_2:51406303-51406322 | Msa0256570:CDS | 40.0% |
| TCCTTAACAACTTGATCTGG+TGG | - | chr2_2:51406307-51406326 | None:intergenic | 40.0% | |
| !!! | TGGAATTGTTTTTGCTGCAC+TGG | + | chr2_2:51406369-51406388 | Msa0256570:CDS | 40.0% |
| !! | GGTGGATTGAAGTTGTATTG+GGG | + | chr2_2:51406499-51406518 | Msa0256570:CDS | 40.0% |
| CAATTGATACCTGCTGGAAA+AGG | - | chr2_2:51406601-51406620 | None:intergenic | 40.0% | |
| GCTAAACAATTGATACCTGC+TGG | - | chr2_2:51406607-51406626 | None:intergenic | 40.0% | |
| CATCATAACCAACATGTGGT+TGG | + | chr2_2:51406682-51406701 | Msa0256570:intron | 40.0% | |
| TGCATGCAATCTAAATCCCT+TGG | - | chr2_2:51406724-51406743 | None:intergenic | 40.0% | |
| GGGTGTATGTTTCATAGTGA+AGG | + | chr2_2:51407000-51407019 | Msa0256570:intron | 40.0% | |
| ! | GCATCCATTGAACAAGTTGA+AGG | + | chr2_2:51407041-51407060 | Msa0256570:CDS | 40.0% |
| !! | GAGTTGGTAGTGAATCCAAT+TGG | + | chr2_2:51407148-51407167 | Msa0256570:CDS | 40.0% |
| ! | TGGTAGTGAATCCAATTGGA+TGG | + | chr2_2:51407152-51407171 | Msa0256570:CDS | 40.0% |
| GTGAATCCAATTGGATGGAA+TGG | + | chr2_2:51407157-51407176 | Msa0256570:CDS | 40.0% | |
| AAAGGATAAGGTAAGGTAGG+TGG | - | chr2_2:51407287-51407306 | None:intergenic | 40.0% | |
| CAGGAAAACTACACAAACAC+AGG | - | chr2_2:51407332-51407351 | None:intergenic | 40.0% | |
| ATACTACCTTGTTGCTCAGA+AGG | - | chr2_2:51407358-51407377 | None:intergenic | 40.0% | |
| AATAGCCCTGCATCATACAA+AGG | + | chr2_2:51405550-51405569 | Msa0256570:CDS | 40.0% | |
| GTTTGCTTGAGCCAATAACA+TGG | + | chr2_2:51406065-51406084 | Msa0256570:intron | 40.0% | |
| ! | ACAACTTGATCTGGTGGATA+TGG | - | chr2_2:51406301-51406320 | None:intergenic | 40.0% |
| ! | TCCACCAGATCAAGTTGTTA+AGG | + | chr2_2:51406303-51406322 | Msa0256570:CDS | 40.0% |
| TCCTTAACAACTTGATCTGG+TGG | - | chr2_2:51406307-51406326 | None:intergenic | 40.0% | |
| !!! | TGGAATTGTTTTTGCTGCAC+TGG | + | chr2_2:51406369-51406388 | Msa0256570:CDS | 40.0% |
| !! | GGTGGATTGAAGTTGTATTG+GGG | + | chr2_2:51406499-51406518 | Msa0256570:CDS | 40.0% |
| CAATTGATACCTGCTGGAAA+AGG | - | chr2_2:51406601-51406620 | None:intergenic | 40.0% | |
| GCTAAACAATTGATACCTGC+TGG | - | chr2_2:51406607-51406626 | None:intergenic | 40.0% | |
| CATCATAACCAACATGTGGT+TGG | + | chr2_2:51406682-51406701 | Msa0256570:intron | 40.0% | |
| TGCATGCAATCTAAATCCCT+TGG | - | chr2_2:51406724-51406743 | None:intergenic | 40.0% | |
| GGGTGTATGTTTCATAGTGA+AGG | + | chr2_2:51407000-51407019 | Msa0256570:intron | 40.0% | |
| ! | GCATCCATTGAACAAGTTGA+AGG | + | chr2_2:51407041-51407060 | Msa0256570:CDS | 40.0% |
| !! | GAGTTGGTAGTGAATCCAAT+TGG | + | chr2_2:51407148-51407167 | Msa0256570:CDS | 40.0% |
| ! | TGGTAGTGAATCCAATTGGA+TGG | + | chr2_2:51407152-51407171 | Msa0256570:CDS | 40.0% |
| GTGAATCCAATTGGATGGAA+TGG | + | chr2_2:51407157-51407176 | Msa0256570:CDS | 40.0% | |
| AAAGGATAAGGTAAGGTAGG+TGG | - | chr2_2:51407287-51407306 | None:intergenic | 40.0% | |
| CAGGAAAACTACACAAACAC+AGG | - | chr2_2:51407332-51407351 | None:intergenic | 40.0% | |
| ATACTACCTTGTTGCTCAGA+AGG | - | chr2_2:51407358-51407377 | None:intergenic | 40.0% | |
| ! | TTTATGCAGGGTTCTGATGG+TGG | + | chr2_2:51406481-51406500 | Msa0256570:intron | 45.0% |
| ! | ACAAGTTGAAGGCAATGCCA+AGG | + | chr2_2:51407052-51407071 | Msa0256570:CDS | 45.0% |
| ATGCCAAGGATAGACAGTGA+AGG | + | chr2_2:51407066-51407085 | Msa0256570:CDS | 45.0% | |
| ACTCCTTCACTGTCTATCCT+TGG | - | chr2_2:51407072-51407091 | None:intergenic | 45.0% | |
| ACAGTGAAGGAGTGATGTGT+GGG | + | chr2_2:51407079-51407098 | Msa0256570:CDS | 45.0% | |
| GTCAACAGTATTCCTCGAGT+TGG | + | chr2_2:51407132-51407151 | Msa0256570:CDS | 45.0% | |
| TTGGATTCACTACCAACTCG+AGG | - | chr2_2:51407147-51407166 | None:intergenic | 45.0% | |
| TTGCTCCCATTCCATCCAAT+TGG | - | chr2_2:51407166-51407185 | None:intergenic | 45.0% | |
| CAAACACAGGAAACCGAAAC+AGG | - | chr2_2:51407319-51407338 | None:intergenic | 45.0% | |
| CTTGTTGCTCAGAAGGAAAC+AGG | - | chr2_2:51407351-51407370 | None:intergenic | 45.0% | |
| CTGTTTCCTTCTGAGCAACA+AGG | + | chr2_2:51407349-51407368 | Msa0256570:three_prime_UTR | 45.0% | |
| ! | TTTATGCAGGGTTCTGATGG+TGG | + | chr2_2:51406481-51406500 | Msa0256570:intron | 45.0% |
| ! | ACAAGTTGAAGGCAATGCCA+AGG | + | chr2_2:51407052-51407071 | Msa0256570:CDS | 45.0% |
| ATGCCAAGGATAGACAGTGA+AGG | + | chr2_2:51407066-51407085 | Msa0256570:CDS | 45.0% | |
| ACTCCTTCACTGTCTATCCT+TGG | - | chr2_2:51407072-51407091 | None:intergenic | 45.0% | |
| ACAGTGAAGGAGTGATGTGT+GGG | + | chr2_2:51407079-51407098 | Msa0256570:CDS | 45.0% | |
| GTCAACAGTATTCCTCGAGT+TGG | + | chr2_2:51407132-51407151 | Msa0256570:CDS | 45.0% | |
| TTGGATTCACTACCAACTCG+AGG | - | chr2_2:51407147-51407166 | None:intergenic | 45.0% | |
| TTGCTCCCATTCCATCCAAT+TGG | - | chr2_2:51407166-51407185 | None:intergenic | 45.0% | |
| CAAACACAGGAAACCGAAAC+AGG | - | chr2_2:51407319-51407338 | None:intergenic | 45.0% | |
| CTTGTTGCTCAGAAGGAAAC+AGG | - | chr2_2:51407351-51407370 | None:intergenic | 45.0% | |
| CTGTTTCCTTCTGAGCAACA+AGG | + | chr2_2:51407349-51407368 | Msa0256570:three_prime_UTR | 45.0% | |
| GTGGATGAGCAAGACCTTTG+TGG | - | chr2_2:51405519-51405538 | None:intergenic | 50.0% | |
| ! | GATCTGGTGGATATGGACCA+CGG | - | chr2_2:51406294-51406313 | None:intergenic | 50.0% |
| !! | TATTGGGGTATTGCCGCTGA+TGG | + | chr2_2:51406514-51406533 | Msa0256570:CDS | 50.0% |
| !! | ATTGGGGTATTGCCGCTGAT+GGG | + | chr2_2:51406515-51406534 | Msa0256570:CDS | 50.0% |
| GATCACAACAGACCCATCAG+CGG | - | chr2_2:51406530-51406549 | None:intergenic | 50.0% | |
| ! | TCCTTTGCTCCTTTTCCAGC+AGG | + | chr2_2:51406589-51406608 | Msa0256570:CDS | 50.0% |
| ACCTGCTGGAAAAGGAGCAA+AGG | - | chr2_2:51406593-51406612 | None:intergenic | 50.0% | |
| TCCGAGTGGTAAGACACCAA+GGG | + | chr2_2:51406705-51406724 | Msa0256570:intron | 50.0% | |
| !! | TCCCTTGGTGTCTTACCACT+CGG | - | chr2_2:51406709-51406728 | None:intergenic | 50.0% |
| GACAGTGAAGGAGTGATGTG+TGG | + | chr2_2:51407078-51407097 | Msa0256570:CDS | 50.0% | |
| CAGTGAAGGAGTGATGTGTG+GGG | + | chr2_2:51407080-51407099 | Msa0256570:CDS | 50.0% | |
| GATGTGTGGGGCCAACTTTA+AGG | + | chr2_2:51407092-51407111 | Msa0256570:CDS | 50.0% | |
| ! | AGGTAAGGTAGGTGGTGGTA+GGG | - | chr2_2:51407279-51407298 | None:intergenic | 50.0% |
| ! | AAGGTAAGGTAGGTGGTGGT+AGG | - | chr2_2:51407280-51407299 | None:intergenic | 50.0% |
| GGATAAGGTAAGGTAGGTGG+TGG | - | chr2_2:51407284-51407303 | None:intergenic | 50.0% | |
| GTGGATGAGCAAGACCTTTG+TGG | - | chr2_2:51405519-51405538 | None:intergenic | 50.0% | |
| ! | GATCTGGTGGATATGGACCA+CGG | - | chr2_2:51406294-51406313 | None:intergenic | 50.0% |
| !! | TATTGGGGTATTGCCGCTGA+TGG | + | chr2_2:51406514-51406533 | Msa0256570:CDS | 50.0% |
| !! | ATTGGGGTATTGCCGCTGAT+GGG | + | chr2_2:51406515-51406534 | Msa0256570:CDS | 50.0% |
| GATCACAACAGACCCATCAG+CGG | - | chr2_2:51406530-51406549 | None:intergenic | 50.0% | |
| ! | TCCTTTGCTCCTTTTCCAGC+AGG | + | chr2_2:51406589-51406608 | Msa0256570:CDS | 50.0% |
| ACCTGCTGGAAAAGGAGCAA+AGG | - | chr2_2:51406593-51406612 | None:intergenic | 50.0% | |
| TCCGAGTGGTAAGACACCAA+GGG | + | chr2_2:51406705-51406724 | Msa0256570:intron | 50.0% | |
| !! | TCCCTTGGTGTCTTACCACT+CGG | - | chr2_2:51406709-51406728 | None:intergenic | 50.0% |
| GACAGTGAAGGAGTGATGTG+TGG | + | chr2_2:51407078-51407097 | Msa0256570:CDS | 50.0% | |
| CAGTGAAGGAGTGATGTGTG+GGG | + | chr2_2:51407080-51407099 | Msa0256570:CDS | 50.0% | |
| GATGTGTGGGGCCAACTTTA+AGG | + | chr2_2:51407092-51407111 | Msa0256570:CDS | 50.0% | |
| ! | AGGTAAGGTAGGTGGTGGTA+GGG | - | chr2_2:51407279-51407298 | None:intergenic | 50.0% |
| ! | AAGGTAAGGTAGGTGGTGGT+AGG | - | chr2_2:51407280-51407299 | None:intergenic | 50.0% |
| GGATAAGGTAAGGTAGGTGG+TGG | - | chr2_2:51407284-51407303 | None:intergenic | 50.0% | |
| GGGCTATTCAGCTCTTCAGG+TGG | - | chr2_2:51405538-51405557 | None:intergenic | 55.0% | |
| GCAGGGCTATTCAGCTCTTC+AGG | - | chr2_2:51405541-51405560 | None:intergenic | 55.0% | |
| TATAGGACACTCCGTGACCG+TGG | + | chr2_2:51406274-51406293 | Msa0256570:CDS | 55.0% | |
| GTGGATATGGACCACGGTCA+CGG | - | chr2_2:51406288-51406307 | None:intergenic | 55.0% | |
| CACTCGGACCAACCACATGT+TGG | - | chr2_2:51406693-51406712 | None:intergenic | 55.0% | |
| ! | CAACATGTGGTTGGTCCGAG+TGG | + | chr2_2:51406691-51406710 | Msa0256570:intron | 55.0% |
| GTCCGAGTGGTAAGACACCA+AGG | + | chr2_2:51406704-51406723 | Msa0256570:intron | 55.0% | |
| ! | AAGGTAGGTGGTGGTAGGGT+TGG | - | chr2_2:51407275-51407294 | None:intergenic | 55.0% |
| GGGCTATTCAGCTCTTCAGG+TGG | - | chr2_2:51405538-51405557 | None:intergenic | 55.0% | |
| GCAGGGCTATTCAGCTCTTC+AGG | - | chr2_2:51405541-51405560 | None:intergenic | 55.0% | |
| TATAGGACACTCCGTGACCG+TGG | + | chr2_2:51406274-51406293 | Msa0256570:CDS | 55.0% | |
| GTGGATATGGACCACGGTCA+CGG | - | chr2_2:51406288-51406307 | None:intergenic | 55.0% | |
| CACTCGGACCAACCACATGT+TGG | - | chr2_2:51406693-51406712 | None:intergenic | 55.0% | |
| ! | CAACATGTGGTTGGTCCGAG+TGG | + | chr2_2:51406691-51406710 | Msa0256570:intron | 55.0% |
| GTCCGAGTGGTAAGACACCA+AGG | + | chr2_2:51406704-51406723 | Msa0256570:intron | 55.0% | |
| ! | AAGGTAGGTGGTGGTAGGGT+TGG | - | chr2_2:51407275-51407294 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 51405393 | 51407442 | 51405393 | ID=Msa0256570;Name=Msa0256570 |
| chr2_2 | mRNA | 51405393 | 51407442 | 51405393 | ID=Msa0256570-mRNA-1;Parent=Msa0256570;Name=Msa0256570-mRNA-1;_AED=0.10;_eAED=0.10;_QI=109|1|1|1|1|1|4|251|253 |
| chr2_2 | exon | 51405393 | 51405710 | 51405393 | ID=Msa0256570-mRNA-1:exon:15531;Parent=Msa0256570-mRNA-1 |
| chr2_2 | exon | 51406150 | 51406390 | 51406150 | ID=Msa0256570-mRNA-1:exon:15532;Parent=Msa0256570-mRNA-1 |
| chr2_2 | exon | 51406490 | 51406610 | 51406490 | ID=Msa0256570-mRNA-1:exon:15533;Parent=Msa0256570-mRNA-1 |
| chr2_2 | exon | 51407001 | 51407442 | 51407001 | ID=Msa0256570-mRNA-1:exon:15534;Parent=Msa0256570-mRNA-1 |
| chr2_2 | five_prime_UTR | 51405393 | 51405501 | 51405393 | ID=Msa0256570-mRNA-1:five_prime_utr;Parent=Msa0256570-mRNA-1 |
| chr2_2 | CDS | 51405502 | 51405710 | 51405502 | ID=Msa0256570-mRNA-1:cds;Parent=Msa0256570-mRNA-1 |
| chr2_2 | CDS | 51406150 | 51406390 | 51406150 | ID=Msa0256570-mRNA-1:cds;Parent=Msa0256570-mRNA-1 |
| chr2_2 | CDS | 51406490 | 51406610 | 51406490 | ID=Msa0256570-mRNA-1:cds;Parent=Msa0256570-mRNA-1 |
| chr2_2 | CDS | 51407001 | 51407191 | 51407001 | ID=Msa0256570-mRNA-1:cds;Parent=Msa0256570-mRNA-1 |
| chr2_2 | three_prime_UTR | 51407192 | 51407442 | 51407192 | ID=Msa0256570-mRNA-1:three_prime_utr;Parent=Msa0256570-mRNA-1 |
| Gene Sequence |
| Protein sequence |
