Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0387820 | XP_003601524.2 | 97.167 | 353 | 9 | 1 | 1 | 353 | 1 | 352 | 0.0 | 652 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0387820 | sp|Q8W034|RNP1_ARATH | 40.107 | 187 | 95 | 2 | 18 | 188 | 6 | 191 | 5.11e-45 | 162 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0387820 | G7J8U4 | 97.167 | 353 | 9 | 1 | 1 | 353 | 1 | 352 | 0.0 | 652 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001710 | Msa0387820 | -0.800811 | 1.209889e-48 | -8.615850e-47 |
| Msa0015930 | Msa0387820 | 0.811851 | 5.692917e-51 | -8.615850e-47 |
| Msa0020390 | Msa0387820 | 0.820074 | 8.313232e-53 | -8.615850e-47 |
| Msa0020410 | Msa0387820 | 0.800748 | 1.246231e-48 | -8.615850e-47 |
| Msa0026710 | Msa0387820 | 0.838985 | 2.076120e-57 | -8.615850e-47 |
| Msa0043980 | Msa0387820 | 0.802494 | 5.461728e-49 | -8.615850e-47 |
| Msa0044000 | Msa0387820 | 0.845984 | 2.887640e-59 | -8.615850e-47 |
| Msa0059040 | Msa0387820 | 0.831875 | 1.302505e-55 | -8.615850e-47 |
| Msa0059110 | Msa0387820 | 0.832204 | 1.080304e-55 | -8.615850e-47 |
| Msa0072420 | Msa0387820 | 0.813867 | 2.059040e-51 | -8.615850e-47 |
| Msa0090570 | Msa0387820 | 0.830135 | 3.483373e-55 | -8.615850e-47 |
| Msa0115400 | Msa0387820 | 0.825883 | 3.677256e-54 | -8.615850e-47 |
| Msa0127800 | Msa0387820 | 0.840802 | 6.982805e-58 | -8.615850e-47 |
| Msa0140820 | Msa0387820 | 0.800921 | 1.148408e-48 | -8.615850e-47 |
| Msa0149440 | Msa0387820 | 0.808877 | 2.495036e-50 | -8.615850e-47 |
| Msa0156370 | Msa0387820 | 0.817197 | 3.735579e-52 | -8.615850e-47 |
| Msa0162130 | Msa0387820 | 0.822881 | 1.868521e-53 | -8.615850e-47 |
| Msa0179190 | Msa0387820 | 0.806750 | 7.067853e-50 | -8.615850e-47 |
| Msa0183850 | Msa0387820 | 0.822021 | 2.959744e-53 | -8.615850e-47 |
| Msa0189520 | Msa0387820 | 0.800603 | 1.333903e-48 | -8.615850e-47 |
| Msa0204960 | Msa0387820 | 0.845694 | 3.461719e-59 | -8.615850e-47 |
| Msa0229230 | Msa0387820 | 0.800809 | 1.210605e-48 | -8.615850e-47 |
| Msa0233370 | Msa0387820 | 0.803654 | 3.143706e-49 | -8.615850e-47 |
| Msa0377290 | Msa0387820 | 0.804636 | 1.964645e-49 | -8.615850e-47 |
| Msa0385500 | Msa0387820 | 0.814171 | 1.764869e-51 | -8.615850e-47 |
| Msa0387820 | Msa0388700 | 0.833317 | 5.716389e-56 | -8.615850e-47 |
| Msa0387820 | Msa0395820 | 0.806981 | 6.316597e-50 | -8.615850e-47 |
| Msa0387820 | Msa0398670 | 0.801152 | 1.030387e-48 | -8.615850e-47 |
| Msa0387820 | Msa0402790 | 0.803918 | 2.771924e-49 | -8.615850e-47 |
| Msa0387820 | Msa0420830 | 0.898552 | 4.744718e-77 | -8.615850e-47 |
| Msa0387820 | Msa0462600 | 0.817150 | 3.829206e-52 | -8.615850e-47 |
| Msa0387820 | Msa0467380 | 0.819350 | 1.216595e-52 | -8.615850e-47 |
| Msa0387820 | Msa0497210 | 0.837913 | 3.925780e-57 | -8.615850e-47 |
| Msa0387820 | Msa0510840 | 0.824588 | 7.441817e-54 | -8.615850e-47 |
| Msa0387820 | Msa0512340 | 0.915252 | 7.336437e-85 | -8.615850e-47 |
| Msa0387820 | Msa0527540 | 0.819719 | 1.002067e-52 | -8.615850e-47 |
| Msa0387820 | Msa0531530 | 0.864567 | 1.108267e-64 | -8.615850e-47 |
| Msa0387820 | Msa0542260 | 0.818032 | 2.422580e-52 | -8.615850e-47 |
| Msa0387820 | Msa0542290 | 0.868919 | 4.562773e-66 | -8.615850e-47 |
| Msa0387820 | Msa0542560 | 0.815069 | 1.116638e-51 | -8.615850e-47 |
| Msa0387820 | Msa0547160 | 0.817500 | 3.193807e-52 | -8.615850e-47 |
| Msa0387820 | Msa0548240 | 0.819262 | 1.274009e-52 | -8.615850e-47 |
| Msa0387820 | Msa0556060 | 0.844977 | 5.410487e-59 | -8.615850e-47 |
| Msa0387820 | Msa0588260 | 0.862496 | 4.862870e-64 | -8.615850e-47 |
| Msa0387820 | Msa0590990 | 0.803130 | 4.036467e-49 | -8.615850e-47 |
| Msa0387820 | Msa0604290 | 0.853055 | 3.076043e-61 | -8.615850e-47 |
| Msa0387820 | Msa0615490 | 0.810653 | 1.035613e-50 | -8.615850e-47 |
| Msa0387820 | Msa0615710 | 0.809092 | 2.245158e-50 | -8.615850e-47 |
| Msa0387820 | Msa0645530 | 0.817541 | 3.125673e-52 | -8.615850e-47 |
| Msa0387820 | Msa0665860 | 0.831323 | 1.781356e-55 | -8.615850e-47 |
| Msa0387820 | Msa0672550 | 0.849137 | 3.921303e-60 | -8.615850e-47 |
| Msa0387820 | Msa0677530 | 0.844407 | 7.706707e-59 | -8.615850e-47 |
| Msa0387820 | Msa0679030 | 0.804468 | 2.129614e-49 | -8.615850e-47 |
| Msa0387820 | Msa0682680 | 0.825856 | 3.730811e-54 | -8.615850e-47 |
| Msa0387820 | Msa0685090 | 0.832420 | 9.548088e-56 | -8.615850e-47 |
| Msa0387820 | Msa0689440 | 0.810492 | 1.122098e-50 | -8.615850e-47 |
| Msa0387820 | Msa0692830 | 0.801022 | 1.095358e-48 | -8.615850e-47 |
| Msa0387820 | Msa0692950 | 0.807167 | 5.770696e-50 | -8.615850e-47 |
| Msa0387820 | Msa0698540 | 0.853946 | 1.707202e-61 | -8.615850e-47 |
| Msa0387820 | Msa0707250 | 0.804467 | 2.130257e-49 | -8.615850e-47 |
| Msa0387820 | Msa0717230 | -0.822983 | 1.768574e-53 | -8.615850e-47 |
| Msa0387820 | Msa0727550 | 0.835857 | 1.314028e-56 | -8.615850e-47 |
| Msa0387820 | Msa0737600 | 0.819162 | 1.342230e-52 | -8.615850e-47 |
| Msa0387820 | Msa0757610 | 0.801656 | 8.122663e-49 | -8.615850e-47 |
| Msa0387820 | Msa0765080 | 0.853587 | 2.165547e-61 | -8.615850e-47 |
| Msa0387820 | Msa0768860 | 0.805073 | 1.592098e-49 | -8.615850e-47 |
| Msa0387820 | Msa0769980 | 0.804547 | 2.050121e-49 | -8.615850e-47 |
| Msa0387820 | Msa0799680 | -0.815171 | 1.059887e-51 | -8.615850e-47 |
| Msa0387820 | Msa0800370 | 0.814076 | 1.851660e-51 | -8.615850e-47 |
| Msa0387820 | Msa0808080 | 0.803092 | 4.110438e-49 | -8.615850e-47 |
| Msa0387820 | Msa0828590 | 0.813400 | 2.609114e-51 | -8.615850e-47 |
| Msa0387820 | Msa0849030 | 0.809856 | 1.538344e-50 | -8.615850e-47 |
| Msa0387820 | Msa0856960 | 0.811760 | 5.957807e-51 | -8.615850e-47 |
| Msa0387820 | Msa0887250 | 0.811290 | 7.536956e-51 | -8.615850e-47 |
| Msa0387820 | Msa0892640 | 0.804874 | 1.752172e-49 | -8.615850e-47 |
| Msa0387820 | Msa0933380 | 0.805238 | 1.470223e-49 | -8.615850e-47 |
| Msa0387820 | Msa0958000 | 0.803905 | 2.788680e-49 | -8.615850e-47 |
| Msa0387820 | Msa0987370 | 0.829737 | 4.355160e-55 | -8.615850e-47 |
| Msa0387820 | Msa1006710 | 0.808046 | 3.753515e-50 | -8.615850e-47 |
| Msa0387820 | Msa1021520 | 0.821952 | 3.071151e-53 | -8.615850e-47 |
| Msa0387820 | Msa1029050 | 0.834029 | 3.796055e-56 | -8.615850e-47 |
| Msa0387820 | Msa1031660 | 0.806042 | 9.965799e-50 | -8.615850e-47 |
| Msa0387820 | Msa1037420 | 0.804856 | 1.767100e-49 | -8.615850e-47 |
| Msa0387820 | Msa1080270 | 0.808763 | 2.639887e-50 | -8.615850e-47 |
| Msa0387820 | Msa1081930 | 0.833728 | 4.514717e-56 | -8.615850e-47 |
| Msa0387820 | Msa1091940 | 0.804301 | 2.306510e-49 | -8.615850e-47 |
| Msa0387820 | Msa1102220 | 0.821894 | 3.167503e-53 | -8.615850e-47 |
| Msa0387820 | Msa1109680 | 0.829827 | 4.139789e-55 | -8.615850e-47 |
| Msa0387820 | Msa1117240 | 0.806238 | 9.066034e-50 | -8.615850e-47 |
| Msa0387820 | Msa1128270 | 0.822525 | 2.261198e-53 | -8.615850e-47 |
| Msa0387820 | Msa1128280 | 0.820985 | 5.136301e-53 | -8.615850e-47 |
| Msa0387820 | Msa1128600 | 0.807274 | 5.475595e-50 | -8.615850e-47 |
| Msa0387820 | Msa1148910 | 0.800196 | 1.614345e-48 | -8.615850e-47 |
| Msa0387820 | Msa1160590 | 0.821972 | 3.038685e-53 | -8.615850e-47 |
| Msa0387820 | Msa1165270 | 0.804098 | 2.542929e-49 | -8.615850e-47 |
| Msa0387820 | Msa1180500 | 0.812087 | 5.058641e-51 | -8.615850e-47 |
| Msa0387820 | Msa1181250 | 0.819130 | 1.364830e-52 | -8.615850e-47 |
| Msa0387820 | Msa1181330 | 0.812582 | 3.943225e-51 | -8.615850e-47 |
| Msa0387820 | Msa1181910 | 0.809438 | 1.892291e-50 | -8.615850e-47 |
| Msa0387820 | Msa1190920 | 0.806513 | 7.930027e-50 | -8.615850e-47 |
| Msa0387820 | Msa1206270 | 0.801375 | 9.276286e-49 | -8.615850e-47 |
| Msa0387820 | Msa1231840 | 0.835289 | 1.829423e-56 | -8.615850e-47 |
| Msa0387820 | Msa1238390 | 0.815084 | 1.107962e-51 | -8.615850e-47 |
| Msa0387820 | Msa1254730 | 0.855491 | 6.089054e-62 | -8.615850e-47 |
| Msa0387820 | Msa1271130 | 0.806981 | 6.317763e-50 | -8.615850e-47 |
| Msa0387820 | Msa1274560 | 0.816982 | 4.175882e-52 | -8.615850e-47 |
| Msa0387820 | Msa1294820 | 0.817939 | 2.542116e-52 | -8.615850e-47 |
| Msa0387820 | Msa1305660 | 0.803593 | 3.237763e-49 | -8.615850e-47 |
| Msa0387820 | Msa1312520 | 0.815151 | 1.070866e-51 | -8.615850e-47 |
| Msa0387820 | Msa1332590 | 0.839797 | 1.277791e-57 | -8.615850e-47 |
| Msa0387820 | Msa1336560 | 0.812136 | 4.935405e-51 | -8.615850e-47 |
| Msa0387820 | Msa1342410 | 0.835149 | 1.984690e-56 | -8.615850e-47 |
| Msa0387820 | Msa1351540 | 0.818987 | 1.470940e-52 | -8.615850e-47 |
| Msa0387820 | Msa1361520 | 0.821044 | 4.977259e-53 | -8.615850e-47 |
| Msa0387820 | Msa1365800 | 0.803877 | 2.826228e-49 | -8.615850e-47 |
| Msa0387820 | Msa1368530 | 0.803963 | 2.712746e-49 | -8.615850e-47 |
| Msa0387820 | Msa1390670 | 0.814739 | 1.321568e-51 | -8.615850e-47 |
| Msa0387820 | Msa1400580 | 0.800848 | 1.188586e-48 | -8.615850e-47 |
| Msa0387820 | Msa1415010 | 0.805574 | 1.249932e-49 | -8.615850e-47 |
| Msa0387820 | Msa1419870 | 0.832210 | 1.076565e-55 | -8.615850e-47 |
| Msa0387820 | Msa1434420 | -0.853232 | 2.738367e-61 | -8.615850e-47 |
| Msa0387820 | Msa1435390 | 0.817629 | 2.985864e-52 | -8.615850e-47 |
| Msa0387820 | Msa1440930 | 0.808288 | 3.333842e-50 | -8.615850e-47 |
| Msa0387820 | Msa1451140 | 0.840693 | 7.458492e-58 | -8.615850e-47 |
| Msa0387820 | Msa1458290 | 0.804597 | 2.001846e-49 | -8.615850e-47 |
| Msa0257490 | Msa0387820 | 0.824359 | 8.425960e-54 | -8.615850e-47 |
| Msa0259240 | Msa0387820 | 0.808461 | 3.062980e-50 | -8.615850e-47 |
| Msa0272300 | Msa0387820 | 0.809869 | 1.529058e-50 | -8.615850e-47 |
| Msa0274040 | Msa0387820 | -0.883432 | 4.508789e-71 | -8.615850e-47 |
| Msa0281530 | Msa0387820 | 0.859691 | 3.470374e-63 | -8.615850e-47 |
| Msa0305410 | Msa0387820 | 0.802180 | 6.341193e-49 | -8.615850e-47 |
| Msa0326480 | Msa0387820 | 0.851290 | 9.774717e-61 | -8.615850e-47 |
| Msa0336290 | Msa0387820 | 0.821349 | 4.234110e-53 | -8.615850e-47 |
| Msa0357900 | Msa0387820 | 0.819157 | 1.345779e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0387820 | MtrunA17_Chr3g0120721 | 97.167 | 353 | 9 | 1 | 1 | 353 | 1 | 352 | 0.0 | 652 |
| Msa0387820 | MtrunA17_Chr6g0449481 | 65.534 | 206 | 68 | 2 | 11 | 216 | 38 | 240 | 5.57e-89 | 272 |
| Msa0387820 | MtrunA17_Chr2g0290191 | 38.683 | 243 | 113 | 6 | 17 | 239 | 3 | 229 | 8.09e-50 | 173 |
| Msa0387820 | MtrunA17_Chr3g0101061 | 36.103 | 349 | 182 | 12 | 18 | 336 | 40 | 377 | 8.12e-50 | 174 |
| Msa0387820 | MtrunA17_Chr5g0447761 | 38.776 | 294 | 153 | 10 | 18 | 288 | 6 | 295 | 8.13e-50 | 173 |
| Msa0387820 | MtrunA17_Chr1g0186351 | 36.508 | 189 | 101 | 2 | 18 | 188 | 6 | 193 | 1.27e-44 | 159 |
| Msa0387820 | MtrunA17_Chr3g0135111 | 35.106 | 188 | 102 | 2 | 18 | 186 | 10 | 196 | 4.17e-38 | 139 |
| Msa0387820 | MtrunA17_Chr5g0402191 | 32.143 | 168 | 112 | 1 | 19 | 186 | 5 | 170 | 5.50e-31 | 121 |
| Msa0387820 | MtrunA17_Chr8g0375101 | 29.762 | 168 | 116 | 1 | 19 | 186 | 5 | 170 | 7.31e-26 | 106 |
| Msa0387820 | MtrunA17_Chr4g0045921 | 31.304 | 230 | 129 | 9 | 19 | 226 | 77 | 299 | 4.00e-20 | 90.1 |
| Msa0387820 | MtrunA17_Chr4g0058151 | 27.684 | 177 | 120 | 3 | 19 | 187 | 123 | 299 | 3.27e-18 | 84.0 |
| Msa0387820 | MtrunA17_Chr4g0068631 | 29.752 | 242 | 129 | 9 | 9 | 226 | 71 | 295 | 1.99e-16 | 80.5 |
| Msa0387820 | MtrunA17_Chr2g0278661 | 37.500 | 88 | 52 | 1 | 98 | 185 | 2 | 86 | 3.66e-15 | 74.3 |
| Msa0387820 | MtrunA17_Chr4g0050781 | 36.585 | 82 | 52 | 0 | 107 | 188 | 8 | 89 | 4.04e-14 | 70.5 |
| Msa0387820 | MtrunA17_Chr3g0087481 | 25.000 | 184 | 121 | 3 | 13 | 182 | 55 | 235 | 9.55e-14 | 70.1 |
| Msa0387820 | MtrunA17_Chr1g0210241 | 39.286 | 84 | 49 | 1 | 14 | 95 | 3 | 86 | 1.44e-13 | 70.1 |
| Msa0387820 | MtrunA17_Chr7g0276201 | 29.050 | 179 | 113 | 6 | 19 | 192 | 105 | 274 | 4.17e-13 | 70.1 |
| Msa0387820 | MtrunA17_Chr7g0268551 | 25.738 | 237 | 140 | 10 | 19 | 236 | 17 | 236 | 1.26e-12 | 68.6 |
| Msa0387820 | MtrunA17_Chr4g0035051 | 58.000 | 50 | 21 | 0 | 19 | 68 | 9 | 58 | 5.00e-12 | 62.4 |
| Msa0387820 | MtrunA17_Chr4g0035001 | 49.153 | 59 | 30 | 0 | 19 | 77 | 7 | 65 | 1.04e-11 | 62.8 |
| Msa0387820 | MtrunA17_Chr3g0116631 | 23.333 | 180 | 127 | 3 | 18 | 186 | 109 | 288 | 1.10e-11 | 64.7 |
| Msa0387820 | MtrunA17_Chr8g0346011 | 40.909 | 66 | 39 | 0 | 19 | 84 | 38 | 103 | 1.22e-11 | 64.7 |
| Msa0387820 | MtrunA17_Chr7g0276531 | 42.188 | 64 | 37 | 0 | 19 | 82 | 19 | 82 | 1.40e-11 | 63.9 |
| Msa0387820 | MtrunA17_Chr4g0017401 | 40.909 | 66 | 39 | 0 | 19 | 84 | 17 | 82 | 1.41e-11 | 64.3 |
| Msa0387820 | MtrunA17_Chr3g0144311 | 37.879 | 66 | 41 | 0 | 19 | 84 | 30 | 95 | 1.74e-11 | 63.9 |
| Msa0387820 | MtrunA17_Chr4g0035031 | 45.000 | 60 | 33 | 0 | 19 | 78 | 9 | 68 | 1.94e-11 | 62.4 |
| Msa0387820 | MtrunA17_Chr4g0026301 | 26.923 | 156 | 96 | 7 | 9 | 161 | 107 | 247 | 2.04e-11 | 65.1 |
| Msa0387820 | MtrunA17_Chr5g0440831 | 25.000 | 160 | 112 | 2 | 19 | 170 | 166 | 325 | 2.92e-11 | 64.7 |
| Msa0387820 | MtrunA17_Chr1g0181111 | 25.888 | 197 | 114 | 4 | 19 | 186 | 85 | 278 | 3.98e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0387820 | AT3G13224.2 | 59.189 | 370 | 122 | 10 | 1 | 353 | 1 | 358 | 3.53e-102 | 305 |
| Msa0387820 | AT3G13224.3 | 58.689 | 351 | 117 | 9 | 19 | 353 | 11 | 349 | 3.36e-95 | 287 |
| Msa0387820 | AT3G13224.1 | 71.739 | 184 | 49 | 2 | 1 | 181 | 1 | 184 | 5.05e-89 | 267 |
| Msa0387820 | AT5G40490.1 | 67.172 | 198 | 60 | 4 | 8 | 202 | 31 | 226 | 1.54e-81 | 254 |
| Msa0387820 | AT5G40490.2 | 65.027 | 183 | 60 | 3 | 22 | 202 | 29 | 209 | 8.33e-74 | 234 |
| Msa0387820 | AT1G17640.2 | 51.892 | 185 | 86 | 1 | 17 | 198 | 65 | 249 | 2.83e-66 | 214 |
| Msa0387820 | AT1G17640.1 | 51.892 | 185 | 86 | 1 | 17 | 198 | 65 | 249 | 2.83e-66 | 214 |
| Msa0387820 | AT1G17640.3 | 51.892 | 185 | 86 | 1 | 17 | 198 | 65 | 249 | 2.83e-66 | 214 |
| Msa0387820 | AT5G55550.5 | 40.239 | 251 | 118 | 5 | 18 | 246 | 6 | 246 | 2.45e-49 | 172 |
| Msa0387820 | AT5G55550.5 | 43.878 | 98 | 54 | 1 | 9 | 105 | 101 | 198 | 5.43e-19 | 88.2 |
| Msa0387820 | AT5G55550.4 | 40.239 | 251 | 118 | 5 | 18 | 246 | 6 | 246 | 2.45e-49 | 172 |
| Msa0387820 | AT5G55550.4 | 43.878 | 98 | 54 | 1 | 9 | 105 | 101 | 198 | 5.43e-19 | 88.2 |
| Msa0387820 | AT5G55550.9 | 40.239 | 251 | 118 | 5 | 18 | 246 | 6 | 246 | 2.45e-49 | 172 |
| Msa0387820 | AT5G55550.9 | 43.878 | 98 | 54 | 1 | 9 | 105 | 101 | 198 | 5.43e-19 | 88.2 |
| Msa0387820 | AT5G55550.7 | 40.239 | 251 | 118 | 5 | 18 | 246 | 6 | 246 | 2.45e-49 | 172 |
| Msa0387820 | AT5G55550.7 | 43.878 | 98 | 54 | 1 | 9 | 105 | 101 | 198 | 5.43e-19 | 88.2 |
| Msa0387820 | AT5G55550.1 | 40.239 | 251 | 118 | 5 | 18 | 246 | 6 | 246 | 2.45e-49 | 172 |
| Msa0387820 | AT5G55550.1 | 43.878 | 98 | 54 | 1 | 9 | 105 | 101 | 198 | 5.43e-19 | 88.2 |
| Msa0387820 | AT5G55550.2 | 38.112 | 286 | 142 | 7 | 18 | 280 | 6 | 279 | 4.31e-49 | 171 |
| Msa0387820 | AT5G55550.2 | 43.878 | 98 | 54 | 1 | 9 | 105 | 101 | 198 | 6.77e-19 | 87.8 |
| Msa0387820 | AT5G55550.3 | 38.112 | 286 | 142 | 7 | 18 | 280 | 6 | 279 | 4.31e-49 | 171 |
| Msa0387820 | AT5G55550.3 | 43.878 | 98 | 54 | 1 | 9 | 105 | 101 | 198 | 6.77e-19 | 87.8 |
| Msa0387820 | AT5G55550.6 | 38.112 | 286 | 142 | 7 | 18 | 280 | 6 | 279 | 4.31e-49 | 171 |
| Msa0387820 | AT5G55550.6 | 43.878 | 98 | 54 | 1 | 9 | 105 | 101 | 198 | 6.77e-19 | 87.8 |
| Msa0387820 | AT5G55550.11 | 38.112 | 286 | 142 | 7 | 18 | 280 | 6 | 279 | 4.31e-49 | 171 |
| Msa0387820 | AT5G55550.11 | 43.878 | 98 | 54 | 1 | 9 | 105 | 101 | 198 | 6.77e-19 | 87.8 |
| Msa0387820 | AT4G26650.2 | 40.933 | 193 | 94 | 2 | 18 | 191 | 12 | 203 | 1.30e-47 | 167 |
| Msa0387820 | AT4G26650.2 | 44.444 | 99 | 54 | 1 | 11 | 108 | 112 | 210 | 3.95e-19 | 88.6 |
| Msa0387820 | AT4G26650.1 | 40.933 | 193 | 94 | 2 | 18 | 191 | 15 | 206 | 1.60e-47 | 167 |
| Msa0387820 | AT4G26650.1 | 44.444 | 99 | 54 | 1 | 11 | 108 | 115 | 213 | 3.93e-19 | 88.6 |
| Msa0387820 | AT4G14300.1 | 40.107 | 187 | 95 | 2 | 18 | 188 | 6 | 191 | 5.19e-46 | 162 |
| Msa0387820 | AT4G14300.2 | 40.107 | 187 | 95 | 2 | 18 | 188 | 6 | 191 | 5.19e-46 | 162 |
| Msa0387820 | AT2G33410.1 | 40.642 | 187 | 94 | 3 | 18 | 188 | 6 | 191 | 5.19e-45 | 159 |
| Msa0387820 | AT2G33410.1 | 46.939 | 98 | 48 | 2 | 2 | 98 | 97 | 191 | 4.48e-19 | 88.2 |
| Msa0387820 | AT3G07810.2 | 35.938 | 256 | 139 | 6 | 18 | 256 | 6 | 253 | 6.10e-45 | 161 |
| Msa0387820 | AT3G07810.1 | 35.938 | 256 | 139 | 6 | 18 | 256 | 6 | 253 | 6.66e-45 | 160 |
| Msa0387820 | AT5G47620.1 | 37.255 | 255 | 132 | 8 | 19 | 251 | 7 | 255 | 1.21e-42 | 153 |
| Msa0387820 | AT5G47620.1 | 36.522 | 115 | 65 | 2 | 102 | 210 | 2 | 114 | 2.88e-13 | 70.9 |
| Msa0387820 | AT5G47620.2 | 37.255 | 255 | 132 | 8 | 19 | 251 | 7 | 255 | 1.21e-42 | 153 |
| Msa0387820 | AT5G47620.2 | 36.522 | 115 | 65 | 2 | 102 | 210 | 2 | 114 | 2.88e-13 | 70.9 |
| Msa0387820 | AT5G47620.5 | 37.255 | 255 | 132 | 8 | 19 | 251 | 7 | 255 | 1.21e-42 | 153 |
| Msa0387820 | AT5G47620.5 | 36.522 | 115 | 65 | 2 | 102 | 210 | 2 | 114 | 2.88e-13 | 70.9 |
| Msa0387820 | AT5G55550.8 | 33.033 | 333 | 141 | 8 | 18 | 280 | 6 | 326 | 1.79e-41 | 151 |
| Msa0387820 | AT5G55550.8 | 43.878 | 98 | 54 | 1 | 9 | 105 | 148 | 245 | 9.57e-19 | 87.8 |
| Msa0387820 | AT5G55550.10 | 33.033 | 333 | 141 | 8 | 18 | 280 | 6 | 326 | 2.89e-41 | 151 |
| Msa0387820 | AT5G55550.10 | 43.878 | 98 | 54 | 1 | 9 | 105 | 148 | 245 | 1.15e-18 | 87.4 |
| Msa0387820 | AT5G47620.4 | 34.296 | 277 | 132 | 9 | 19 | 251 | 7 | 277 | 9.84e-38 | 140 |
| Msa0387820 | AT1G58470.2 | 31.624 | 234 | 119 | 3 | 19 | 226 | 7 | 225 | 5.27e-34 | 129 |
| Msa0387820 | AT1G58470.2 | 35.185 | 108 | 68 | 1 | 102 | 209 | 2 | 107 | 4.20e-11 | 63.9 |
| Msa0387820 | AT1G58470.1 | 31.624 | 234 | 119 | 3 | 19 | 226 | 7 | 225 | 5.27e-34 | 129 |
| Msa0387820 | AT1G58470.1 | 35.185 | 108 | 68 | 1 | 102 | 209 | 2 | 107 | 4.20e-11 | 63.9 |
| Msa0387820 | AT4G36960.1 | 31.148 | 183 | 124 | 1 | 19 | 201 | 4 | 184 | 3.43e-31 | 121 |
| Msa0387820 | AT4G36960.2 | 31.148 | 183 | 124 | 1 | 19 | 201 | 4 | 184 | 3.43e-31 | 121 |
| Msa0387820 | AT5G47620.3 | 45.455 | 99 | 45 | 2 | 19 | 108 | 47 | 145 | 9.05e-20 | 89.7 |
| Msa0387820 | AT3G15010.1 | 30.952 | 168 | 111 | 2 | 19 | 182 | 76 | 242 | 4.61e-19 | 88.2 |
| Msa0387820 | AT3G15010.2 | 30.952 | 168 | 111 | 2 | 19 | 182 | 76 | 242 | 4.61e-19 | 88.2 |
| Msa0387820 | AT5G50250.1 | 27.011 | 174 | 121 | 2 | 18 | 185 | 113 | 286 | 3.54e-18 | 84.0 |
| Msa0387820 | AT4G24770.1 | 26.425 | 193 | 131 | 5 | 2 | 186 | 137 | 326 | 1.90e-17 | 82.4 |
| Msa0387820 | AT4G24770.2 | 26.425 | 193 | 131 | 5 | 2 | 186 | 137 | 326 | 1.90e-17 | 82.4 |
| Msa0387820 | AT4G00830.2 | 32.044 | 181 | 105 | 7 | 19 | 192 | 117 | 286 | 1.90e-17 | 84.0 |
| Msa0387820 | AT4G00830.2 | 24.597 | 248 | 150 | 9 | 18 | 255 | 196 | 416 | 5.55e-11 | 63.9 |
| Msa0387820 | AT4G00830.1 | 32.044 | 181 | 105 | 7 | 19 | 192 | 117 | 286 | 1.90e-17 | 84.0 |
| Msa0387820 | AT4G00830.1 | 24.597 | 248 | 150 | 9 | 18 | 255 | 196 | 416 | 5.55e-11 | 63.9 |
| Msa0387820 | AT4G00830.6 | 32.044 | 181 | 105 | 7 | 19 | 192 | 117 | 286 | 1.90e-17 | 84.0 |
| Msa0387820 | AT4G00830.6 | 24.597 | 248 | 150 | 9 | 18 | 255 | 196 | 416 | 5.55e-11 | 63.9 |
| Msa0387820 | AT4G00830.4 | 31.111 | 180 | 108 | 6 | 19 | 192 | 117 | 286 | 4.33e-17 | 82.8 |
| Msa0387820 | AT4G00830.4 | 24.597 | 248 | 150 | 9 | 18 | 255 | 196 | 416 | 4.35e-11 | 64.3 |
| Msa0387820 | AT3G52150.2 | 27.136 | 199 | 124 | 5 | 2 | 182 | 58 | 253 | 2.76e-15 | 75.1 |
| Msa0387820 | AT3G52150.1 | 27.136 | 199 | 124 | 5 | 2 | 182 | 58 | 253 | 2.76e-15 | 75.1 |
| Msa0387820 | AT3G26420.1 | 38.750 | 80 | 49 | 0 | 107 | 186 | 8 | 87 | 3.10e-15 | 74.7 |
| Msa0387820 | AT2G37220.1 | 25.521 | 192 | 118 | 2 | 19 | 185 | 92 | 283 | 4.34e-15 | 75.1 |
| Msa0387820 | AT5G04280.1 | 43.038 | 79 | 43 | 1 | 19 | 95 | 8 | 86 | 7.19e-15 | 74.7 |
| Msa0387820 | AT3G56860.9 | 26.685 | 356 | 201 | 12 | 19 | 343 | 141 | 467 | 2.71e-14 | 74.3 |
| Msa0387820 | AT3G56860.11 | 26.685 | 356 | 201 | 12 | 19 | 343 | 141 | 467 | 2.71e-14 | 74.3 |
| Msa0387820 | AT3G56860.8 | 26.685 | 356 | 201 | 12 | 19 | 343 | 141 | 467 | 2.71e-14 | 74.3 |
| Msa0387820 | AT3G56860.5 | 26.685 | 356 | 201 | 12 | 19 | 343 | 141 | 467 | 2.71e-14 | 74.3 |
| Msa0387820 | AT3G56860.7 | 26.685 | 356 | 201 | 12 | 19 | 343 | 141 | 467 | 2.71e-14 | 74.3 |
| Msa0387820 | AT3G56860.2 | 26.685 | 356 | 201 | 12 | 19 | 343 | 141 | 467 | 2.71e-14 | 74.3 |
| Msa0387820 | AT3G56860.6 | 26.685 | 356 | 201 | 12 | 19 | 343 | 141 | 467 | 2.71e-14 | 74.3 |
| Msa0387820 | AT3G56860.10 | 26.685 | 356 | 201 | 12 | 19 | 343 | 141 | 467 | 2.71e-14 | 74.3 |
| Msa0387820 | AT3G56860.3 | 26.685 | 356 | 201 | 12 | 19 | 343 | 141 | 467 | 2.71e-14 | 74.3 |
| Msa0387820 | AT3G56860.1 | 26.685 | 356 | 201 | 12 | 19 | 343 | 141 | 467 | 2.71e-14 | 74.3 |
| Msa0387820 | AT3G56860.4 | 26.685 | 356 | 201 | 12 | 19 | 343 | 141 | 467 | 2.71e-14 | 74.3 |
| Msa0387820 | AT4G00830.3 | 29.189 | 185 | 97 | 7 | 19 | 192 | 117 | 278 | 4.56e-14 | 73.6 |
| Msa0387820 | AT4G00830.5 | 29.189 | 185 | 97 | 7 | 19 | 192 | 117 | 278 | 4.56e-14 | 73.6 |
| Msa0387820 | AT1G03457.1 | 28.959 | 221 | 132 | 9 | 19 | 225 | 13 | 222 | 8.99e-14 | 72.4 |
| Msa0387820 | AT4G16280.2 | 27.907 | 301 | 166 | 13 | 13 | 295 | 115 | 382 | 1.11e-13 | 72.8 |
| Msa0387820 | AT4G16280.3 | 27.907 | 301 | 166 | 13 | 13 | 295 | 115 | 382 | 1.30e-13 | 72.4 |
| Msa0387820 | AT4G16280.4 | 27.907 | 301 | 166 | 13 | 13 | 295 | 40 | 307 | 1.31e-13 | 72.4 |
| Msa0387820 | AT1G60650.2 | 41.379 | 87 | 49 | 1 | 11 | 95 | 5 | 91 | 2.59e-13 | 70.1 |
| Msa0387820 | AT1G60650.1 | 41.379 | 87 | 49 | 1 | 11 | 95 | 5 | 91 | 2.59e-13 | 70.1 |
| Msa0387820 | AT2G41060.1 | 27.011 | 348 | 202 | 14 | 19 | 339 | 129 | 451 | 6.57e-13 | 70.1 |
| Msa0387820 | AT2G41060.3 | 27.011 | 348 | 202 | 14 | 19 | 339 | 129 | 451 | 6.57e-13 | 70.1 |
| Msa0387820 | AT2G41060.2 | 27.011 | 348 | 202 | 14 | 19 | 339 | 129 | 451 | 6.57e-13 | 70.1 |
| Msa0387820 | AT2G46780.1 | 40.909 | 66 | 39 | 0 | 19 | 84 | 23 | 88 | 1.39e-12 | 68.2 |
| Msa0387820 | AT2G46780.2 | 40.909 | 66 | 39 | 0 | 19 | 84 | 23 | 88 | 1.39e-12 | 68.2 |
| Msa0387820 | AT4G03110.1 | 23.661 | 224 | 139 | 8 | 19 | 226 | 19 | 226 | 1.59e-12 | 68.6 |
| Msa0387820 | AT1G03457.2 | 27.826 | 230 | 132 | 9 | 19 | 225 | 13 | 231 | 1.59e-12 | 68.6 |
| Msa0387820 | AT4G03110.2 | 23.661 | 224 | 139 | 8 | 19 | 226 | 19 | 226 | 4.25e-12 | 67.4 |
| Msa0387820 | AT4G03110.3 | 23.661 | 224 | 139 | 8 | 19 | 226 | 19 | 226 | 4.63e-12 | 67.4 |
| Msa0387820 | AT4G39260.3 | 34.177 | 79 | 52 | 0 | 107 | 185 | 7 | 85 | 8.64e-12 | 61.2 |
| Msa0387820 | AT4G39260.3 | 36.585 | 82 | 48 | 2 | 19 | 100 | 7 | 84 | 8.88e-11 | 58.5 |
| Msa0387820 | AT1G76460.1 | 40.909 | 66 | 39 | 0 | 19 | 84 | 25 | 90 | 9.86e-12 | 65.5 |
| Msa0387820 | AT1G71770.1 | 25.521 | 192 | 118 | 7 | 4 | 177 | 223 | 407 | 1.41e-11 | 66.2 |
| Msa0387820 | AT1G71770.2 | 25.521 | 192 | 118 | 7 | 4 | 177 | 223 | 407 | 1.41e-11 | 66.2 |
| Msa0387820 | AT1G11650.2 | 25.571 | 219 | 125 | 5 | 20 | 217 | 157 | 358 | 1.92e-11 | 65.1 |
| Msa0387820 | AT3G23830.2 | 34.066 | 91 | 60 | 0 | 103 | 193 | 32 | 122 | 7.29e-11 | 60.1 |
| Msa0387820 | AT3G23830.1 | 34.066 | 91 | 60 | 0 | 103 | 193 | 32 | 122 | 7.29e-11 | 60.1 |
| Msa0387820 | AT5G59865.1 | 39.506 | 81 | 49 | 0 | 107 | 187 | 27 | 107 | 7.84e-11 | 59.3 |
| Msa0387820 | AT5G61030.2 | 30.769 | 104 | 70 | 1 | 84 | 185 | 16 | 119 | 8.79e-11 | 62.8 |
| Msa0387820 | AT5G61030.1 | 30.769 | 104 | 70 | 1 | 84 | 185 | 16 | 119 | 8.79e-11 | 62.8 |
Find 210 sgRNAs with CRISPR-Local
Find 305 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTTGTCTGAAATAAATTT+TGG | 0.169288 | 3_1:+91895184 | None:intergenic |
| GATGCCCATTAGGCATTATT+TGG | 0.172268 | 3_1:+91895286 | None:intergenic |
| GTGAGGGTTATCGGACTTTC+TGG | 0.192489 | 3_1:+91897895 | None:intergenic |
| CTTCATTTGGTAGTGATTCT+AGG | 0.203855 | 3_1:-91896454 | Msa0387820:CDS |
| ACCGGTCGTCCTCGAGGATT+TGG | 0.205607 | 3_1:-91897565 | Msa0387820:CDS |
| CGTTCTTACAATGGCGGTTT+TGG | 0.224937 | 3_1:-91896428 | Msa0387820:CDS |
| AAATTGAAATTAGAAATTAT+TGG | 0.232359 | 3_1:-91895424 | Msa0387820:three_prime_UTR |
| ATATCTAACTAAAATCTTAT+AGG | 0.233306 | 3_1:+91895779 | None:intergenic |
| GATACCTAGGGTTGTATCTT+TGG | 0.238318 | 3_1:+91897738 | None:intergenic |
| TCTGGCCCTGGTGCTGGTTT+TGG | 0.239203 | 3_1:-91896068 | Msa0387820:CDS |
| GTTTAACAAGTTGTAGTATA+TGG | 0.245280 | 3_1:-91894929 | Msa0387820:three_prime_UTR |
| TGCCTCTAGTGGGTTCTATA+TGG | 0.250268 | 3_1:-91895325 | Msa0387820:three_prime_UTR |
| TGTTGTTGATCAAGTTATTC+AGG | 0.257520 | 3_1:-91897518 | Msa0387820:CDS |
| TATAGGTCGCTTGGAGGTTT+TGG | 0.267096 | 3_1:-91896350 | Msa0387820:CDS |
| ATTTAATCGCTCCATTAAAA+TGG | 0.270490 | 3_1:+91894451 | None:intergenic |
| GGTGGTAGGTTTAGCGATTA+TGG | 0.272361 | 3_1:-91896329 | Msa0387820:CDS |
| GATGAATTTGAAGATTTCTT+TGG | 0.276198 | 3_1:+91896485 | None:intergenic |
| GGCCCATATGGGAGAGGTGG+TGG | 0.277336 | 3_1:-91896137 | Msa0387820:CDS |
| GATGATTTCAGTGGTGGTTT+TGG | 0.287960 | 3_1:-91896290 | Msa0387820:CDS |
| CTTTGAAACATACCTTGATT+TGG | 0.312122 | 3_1:-91895070 | Msa0387820:three_prime_UTR |
| GCCTCTAGTGGGTTCTATAT+GGG | 0.315006 | 3_1:-91895324 | Msa0387820:three_prime_UTR |
| GGATATGGTGGTGGTGGGTT+AGG | 0.316266 | 3_1:-91896158 | Msa0387820:CDS |
| TCCGGCGACGGCGCCAGTCC+CGG | 0.317544 | 3_1:-91897872 | Msa0387820:CDS |
| CCCATATGGGAGAGGTGGTG+GGG | 0.320586 | 3_1:-91896135 | Msa0387820:CDS |
| TATTCTAGTAGGGGAGGTTA+TGG | 0.322189 | 3_1:-91896029 | Msa0387820:CDS |
| GGTGGATTTGACGATTCTTA+TGG | 0.325447 | 3_1:-91896407 | Msa0387820:CDS |
| GGTGGTGGGTTAGGCCCATA+TGG | 0.328329 | 3_1:-91896149 | Msa0387820:CDS |
| GGGAACTGGTTTGGGGATAA+AGG | 0.329148 | 3_1:+91897971 | None:intergenic |
| CGTTCTTGTGTTTGAGGTCC+AGG | 0.333311 | 3_1:-91894637 | Msa0387820:three_prime_UTR |
| ACTAAGCGTTCCCGTGGATT+TGG | 0.349095 | 3_1:-91896937 | Msa0387820:CDS |
| AAGTTAGACTATCACCATTA+TGG | 0.354131 | 3_1:-91895730 | Msa0387820:three_prime_UTR |
| AGTAATTTATGAAATATAAT+AGG | 0.356807 | 3_1:+91894475 | None:intergenic |
| ATTCTAGTAGGGGAGGTTAT+GGG | 0.359170 | 3_1:-91896028 | Msa0387820:CDS |
| GGCCTTGGTGGTGGATATGG+TGG | 0.362798 | 3_1:-91896170 | Msa0387820:CDS |
| GTGAAGTACTTTGAAAGGTA+TGG | 0.367146 | 3_1:-91897625 | Msa0387820:CDS |
| ACAACTTGTTAAACGATTTG+TGG | 0.368556 | 3_1:+91894938 | None:intergenic |
| CCGGTCGTCCTCGAGGATTT+GGG | 0.373418 | 3_1:-91897564 | Msa0387820:CDS |
| GTTATGGCCCTACATCTTAT+AGG | 0.373426 | 3_1:-91896367 | Msa0387820:CDS |
| CCGGCGACGGCGCCAGTCCC+GGG | 0.373625 | 3_1:-91897871 | Msa0387820:intron |
| AACTAATTGAGTGCTATAAT+AGG | 0.378453 | 3_1:+91895507 | None:intergenic |
| ACTAAAATTGACATCCATAA+TGG | 0.380191 | 3_1:+91895716 | None:intergenic |
| ATAACCTCCCCTACTAGAAT+AGG | 0.380687 | 3_1:+91896031 | None:intergenic |
| TGTTAAATCGTCTTGACTAT+TGG | 0.385812 | 3_1:-91894777 | Msa0387820:three_prime_UTR |
| GTCGCCGGAGTGAGGGTTAT+CGG | 0.392798 | 3_1:+91897886 | None:intergenic |
| TGAAACCAAATAATGCCTAA+TGG | 0.394810 | 3_1:-91895291 | Msa0387820:three_prime_UTR |
| AGCACTCAATTAGTTTCAAC+AGG | 0.402504 | 3_1:-91895499 | Msa0387820:three_prime_UTR |
| TATGGAGGCAGTGGTGGTGC+TGG | 0.406140 | 3_1:-91896263 | Msa0387820:CDS |
| TTCAATATTCGATAATTGCT+TGG | 0.410637 | 3_1:+91894993 | None:intergenic |
| TTCATTTGGTAGTGATTCTA+GGG | 0.412071 | 3_1:-91896453 | Msa0387820:CDS |
| CTTGGTGGTGGATATGGTGG+TGG | 0.412985 | 3_1:-91896167 | Msa0387820:CDS |
| ATCTTTCCTATAGTTATGCT+TGG | 0.412994 | 3_1:-91895614 | Msa0387820:three_prime_UTR |
| TTAGTTTGAGATGCACCCTT+TGG | 0.413443 | 3_1:+91897333 | None:intergenic |
| TGATGGGAACATGATTGATA+TGG | 0.416351 | 3_1:-91896869 | Msa0387820:CDS |
| TATGAATCTGGCCCTGGTGC+TGG | 0.417018 | 3_1:-91896074 | Msa0387820:CDS |
| GATTGATGAAGTTCTATCTT+CGG | 0.421546 | 3_1:+91895846 | None:intergenic |
| GAAACCAAATAATGCCTAAT+GGG | 0.423169 | 3_1:-91895290 | Msa0387820:three_prime_UTR |
| CTCAAAGCATGGGAATGTTA+TGG | 0.425693 | 3_1:-91896986 | Msa0387820:CDS |
| GTCGAGGAAGAAGCTTGCTT+AGG | 0.426406 | 3_1:+91897995 | None:intergenic |
| ACATCCCGTTCTTGTGTTTG+AGG | 0.431698 | 3_1:-91894643 | Msa0387820:three_prime_UTR |
| GGTTATGGTGGTCCAGGCAC+TGG | 0.434215 | 3_1:-91896104 | Msa0387820:CDS |
| GAATGTGTATGTCAGGATAA+AGG | 0.434999 | 3_1:+91895387 | None:intergenic |
| ATTAGGATATGATGCCCATT+AGG | 0.435220 | 3_1:+91895276 | None:intergenic |
| TGAAGTACTTTGAAAGGTAT+GGG | 0.436031 | 3_1:-91897624 | Msa0387820:CDS |
| CCCGGGACTGGCGCCGTCGC+CGG | 0.436702 | 3_1:+91897871 | None:intergenic |
| GCCCATATGGGAGAGGTGGT+GGG | 0.438600 | 3_1:-91896136 | Msa0387820:CDS |
| ACTGGTGGAGGTTATGAATC+TGG | 0.439273 | 3_1:-91896086 | Msa0387820:CDS |
| CCATATGGGAGAGGTGGTGG+GGG | 0.441700 | 3_1:-91896134 | Msa0387820:CDS |
| CACGGGAACGCTTAGTGGTA+TGG | 0.442562 | 3_1:+91896944 | None:intergenic |
| AACAATCAAACCAACCCTTC+GGG | 0.445490 | 3_1:+91895456 | None:intergenic |
| TTCGGTTACTCTGGCCGCTA+TGG | 0.446589 | 3_1:-91896206 | Msa0387820:CDS |
| AATATAAGAATGTGTATGTC+AGG | 0.446630 | 3_1:+91895380 | None:intergenic |
| GAAGAGAGCGAACCCGGGAC+TGG | 0.447616 | 3_1:+91897859 | None:intergenic |
| TTGTATTTCTTAATGAACTT+TGG | 0.449148 | 3_1:-91895152 | Msa0387820:three_prime_UTR |
| GGTGGTGCTGGTGGTTATGC+GGG | 0.451484 | 3_1:-91896251 | Msa0387820:CDS |
| GTGTGAATGTGTACTATTGT+AGG | 0.451839 | 3_1:-91895678 | Msa0387820:three_prime_UTR |
| TTTGGAGGTTATGGAGGCAG+TGG | 0.453260 | 3_1:-91896272 | Msa0387820:CDS |
| ATATGGATTCTGAGAGGGAT+TGG | 0.456476 | 3_1:-91894912 | Msa0387820:three_prime_UTR |
| TGGACCTCAAACACAAGAAC+GGG | 0.457536 | 3_1:+91894639 | None:intergenic |
| GGTGGTGGATATGGTGGTGG+TGG | 0.458107 | 3_1:-91896164 | Msa0387820:CDS |
| TTTCTAGAATTTATGAGAAA+GGG | 0.459913 | 3_1:-91894611 | Msa0387820:three_prime_UTR |
| CCCCACCACCTCTCCCATAT+GGG | 0.460579 | 3_1:+91896135 | None:intergenic |
| CAGGAGGACCCTATTCTAGT+AGG | 0.461637 | 3_1:-91896040 | Msa0387820:CDS |
| CCCAAATCCTCGAGGACGAC+CGG | 0.461844 | 3_1:+91897564 | None:intergenic |
| AAATCCACGGGAACGCTTAG+TGG | 0.462420 | 3_1:+91896939 | None:intergenic |
| GTGGTGGATATGGTGGTGGT+GGG | 0.463417 | 3_1:-91896163 | Msa0387820:CDS |
| GGTGGTCCAGGCACTGGTGG+AGG | 0.471128 | 3_1:-91896098 | Msa0387820:CDS |
| TCATAAAACTATCTTGTGTA+AGG | 0.471625 | 3_1:+91895987 | None:intergenic |
| TAACCTCCCCTACTAGAATA+GGG | 0.473608 | 3_1:+91896032 | None:intergenic |
| GGCCGCTATGGATCCTACAT+GGG | 0.474978 | 3_1:-91896194 | Msa0387820:CDS |
| TCGAGGAAGAAGCTTGCTTA+GGG | 0.475544 | 3_1:+91897996 | None:intergenic |
| ACCTGTGATATAACCTGAAA+AGG | 0.477025 | 3_1:+91895564 | None:intergenic |
| CCTCTAGTGGGTTCTATATG+GGG | 0.477139 | 3_1:-91895323 | Msa0387820:three_prime_UTR |
| TAACAATCAAACCAACCCTT+CGG | 0.480998 | 3_1:+91895455 | None:intergenic |
| TAACAAGCAACACATTGTCT+TGG | 0.482263 | 3_1:+91894548 | None:intergenic |
| AAACCTTCAGATACAGTTGC+TGG | 0.484805 | 3_1:+91897273 | None:intergenic |
| CATAAATTCTAGAAAATCCC+TGG | 0.485861 | 3_1:+91894619 | None:intergenic |
| TTTAGCGATTATGGTGGGTA+TGG | 0.487404 | 3_1:-91896320 | Msa0387820:CDS |
| GTTGATAATTTGTTAGCTGA+TGG | 0.487526 | 3_1:-91896886 | Msa0387820:CDS |
| GGCTCACCAAGCATAACTAT+AGG | 0.488205 | 3_1:+91895608 | None:intergenic |
| GGTGGTTATGCGGGCTATAG+AGG | 0.488404 | 3_1:-91896242 | Msa0387820:CDS |
| CTGGCGCCGTCGCCGGAGTG+AGG | 0.489242 | 3_1:+91897878 | None:intergenic |
| TGGCCGCTATGGATCCTACA+TGG | 0.493274 | 3_1:-91896195 | Msa0387820:CDS |
| TCATAACCTCCACCAGTGCC+TGG | 0.495641 | 3_1:+91896092 | None:intergenic |
| AAGAACTTCTTCTCAAAGCA+TGG | 0.497829 | 3_1:-91896997 | Msa0387820:CDS |
| TCTTATAGGCTGATGACTGA+TGG | 0.499124 | 3_1:+91895793 | None:intergenic |
| TATGGCGGTTATGGTGGTCC+AGG | 0.499140 | 3_1:-91896110 | Msa0387820:CDS |
| GGAAGAAGCTTGCTTAGGGT+TGG | 0.500076 | 3_1:+91898000 | None:intergenic |
| CCAAGCGACCTATAAGATGT+AGG | 0.501589 | 3_1:+91896359 | None:intergenic |
| TGGCGCCGTCGCCGGAGTGA+GGG | 0.503462 | 3_1:+91897879 | None:intergenic |
| GTTCTTGTGTTTGAGGTCCA+GGG | 0.505289 | 3_1:-91894636 | Msa0387820:three_prime_UTR |
| ATCATGAAGGATCGACATAC+CGG | 0.510399 | 3_1:-91897583 | Msa0387820:CDS |
| TTGATAATTTGTTAGCTGAT+GGG | 0.512546 | 3_1:-91896885 | Msa0387820:CDS |
| TGGTGGTGCTGGTGGTTATG+CGG | 0.514299 | 3_1:-91896252 | Msa0387820:CDS |
| GGAGGTTATGGAGGCAGTGG+TGG | 0.517150 | 3_1:-91896269 | Msa0387820:CDS |
| ATCGGACTTTCTGGAAGCCA+TGG | 0.517401 | 3_1:+91897904 | None:intergenic |
| TTCTGCACATCTCATTAGCA+TGG | 0.517745 | 3_1:+91894721 | None:intergenic |
| ATCAAGAGGACTATTCCAAA+GGG | 0.519300 | 3_1:-91897348 | Msa0387820:CDS |
| AAATCGTCTTGACTATTGGT+TGG | 0.519724 | 3_1:-91894773 | Msa0387820:three_prime_UTR |
| GTCCCACCAAAACCAGCACC+AGG | 0.522725 | 3_1:+91896062 | None:intergenic |
| AGGAGGACCCTATTCTAGTA+GGG | 0.525330 | 3_1:-91896039 | Msa0387820:CDS |
| AAAACTATCTTGTGTAAGGA+TGG | 0.527528 | 3_1:+91895991 | None:intergenic |
| CTAGAATCACTACCAAATGA+AGG | 0.529653 | 3_1:+91896455 | None:intergenic |
| TACAAGGAACTTACTACAGG+TGG | 0.532036 | 3_1:-91895915 | Msa0387820:three_prime_UTR |
| GATTGATATGGATGGTACTC+AGG | 0.532207 | 3_1:-91896857 | Msa0387820:intron |
| TTATGAAATATAATAGGTCA+TGG | 0.534465 | 3_1:+91894481 | None:intergenic |
| AACTGATTCCGTTATCATGA+AGG | 0.535063 | 3_1:-91897596 | Msa0387820:CDS |
| TTGATATTATCTGCCTCTAG+TGG | 0.537992 | 3_1:-91895336 | Msa0387820:three_prime_UTR |
| GGTGGAGATGATTTCAGTGG+TGG | 0.538564 | 3_1:-91896296 | Msa0387820:CDS |
| GCCGCTATGGATCCTACATG+GGG | 0.538686 | 3_1:-91896193 | Msa0387820:CDS |
| GGAGGCAGTGGTGGTGCTGG+TGG | 0.540901 | 3_1:-91896260 | Msa0387820:CDS |
| AGAGGAGGAGAATCCTCATT+CGG | 0.541881 | 3_1:-91896224 | Msa0387820:CDS |
| CTTATAGGCTGATGACTGAT+GGG | 0.541950 | 3_1:+91895794 | None:intergenic |
| ACATCTTATAGGTCGCTTGG+AGG | 0.543240 | 3_1:-91896356 | Msa0387820:CDS |
| ATGTCGATCCTTCATGATAA+CGG | 0.543779 | 3_1:+91897588 | None:intergenic |
| GGAGGTTATGAATCTGGCCC+TGG | 0.544539 | 3_1:-91896080 | Msa0387820:CDS |
| TTCTAGTAGGGGAGGTTATG+GGG | 0.546191 | 3_1:-91896027 | Msa0387820:CDS |
| GAATCCTCATTCGGTTACTC+TGG | 0.546282 | 3_1:-91896215 | Msa0387820:CDS |
| CAAGCGACCTATAAGATGTA+GGG | 0.548725 | 3_1:+91896360 | None:intergenic |
| CCTACATCTTATAGGTCGCT+TGG | 0.550258 | 3_1:-91896359 | Msa0387820:CDS |
| AGAACTTCTTCTCAAAGCAT+GGG | 0.550482 | 3_1:-91896996 | Msa0387820:CDS |
| AACTACAAAACCAAATCCAC+GGG | 0.550513 | 3_1:+91896927 | None:intergenic |
| TGATATTATCTGCCTCTAGT+GGG | 0.550810 | 3_1:-91895335 | Msa0387820:three_prime_UTR |
| TGGAAGCCATGGTTGAAGAT+CGG | 0.550819 | 3_1:+91897915 | None:intergenic |
| TCACATCATCAATGACAAGC+AGG | 0.551218 | 3_1:-91897491 | Msa0387820:intron |
| TGTATGTCAGGATAAAGGTT+CGG | 0.552865 | 3_1:+91895392 | None:intergenic |
| AGCGATTATGGTGGGTATGG+AGG | 0.554528 | 3_1:-91896317 | Msa0387820:CDS |
| TGACCTGAAACAGTGGGAAG+GGG | 0.555087 | 3_1:+91897950 | None:intergenic |
| GTGGTGGGTTAGGCCCATAT+GGG | 0.555497 | 3_1:-91896148 | Msa0387820:CDS |
| GTGACCTGAAACAGTGGGAA+GGG | 0.556156 | 3_1:+91897949 | None:intergenic |
| GGTAGGTTTAGCGATTATGG+TGG | 0.558160 | 3_1:-91896326 | Msa0387820:CDS |
| TCATGCAGGAAAATCTTCAT+CGG | 0.559658 | 3_1:-91897769 | Msa0387820:intron |
| GATAACCCTCACTCCGGCGA+CGG | 0.564558 | 3_1:-91897884 | Msa0387820:CDS |
| CTCTAGTGGGTTCTATATGG+GGG | 0.564678 | 3_1:-91895322 | Msa0387820:three_prime_UTR |
| TAATCGACTACACCAAATCA+AGG | 0.566928 | 3_1:+91895058 | None:intergenic |
| TTAGGCCCATATGGGAGAGG+TGG | 0.567019 | 3_1:-91896140 | Msa0387820:CDS |
| GGGTTAGGCCCATATGGGAG+AGG | 0.567087 | 3_1:-91896143 | Msa0387820:CDS |
| TCTCTTGCCTTTGTGACATG+AGG | 0.567848 | 3_1:+91894681 | None:intergenic |
| TATGGTGGTCCAGGCACTGG+TGG | 0.570069 | 3_1:-91896101 | Msa0387820:CDS |
| GCGGCCAGAGTAACCGAATG+AGG | 0.570661 | 3_1:+91896211 | None:intergenic |
| GTTGTAGGTTGAGATCAAGA+AGG | 0.571670 | 3_1:-91896513 | Msa0387820:intron |
| CGCTATGGATCCTACATGGG+GGG | 0.574927 | 3_1:-91896191 | Msa0387820:CDS |
| AGTTACAAGGAACTTACTAC+AGG | 0.575896 | 3_1:-91895918 | Msa0387820:three_prime_UTR |
| GATTATGGTGGGTATGGAGG+TGG | 0.580479 | 3_1:-91896314 | Msa0387820:CDS |
| ATTCCAGCAACTGTATCTGA+AGG | 0.581606 | 3_1:-91897276 | Msa0387820:intron |
| AAACTACAAAACCAAATCCA+CGG | 0.581859 | 3_1:+91896926 | None:intergenic |
| GTAGTATATGGATTCTGAGA+GGG | 0.582185 | 3_1:-91894917 | Msa0387820:three_prime_UTR |
| TCTAGTAGGGGAGGTTATGG+GGG | 0.582748 | 3_1:-91896026 | Msa0387820:CDS |
| TGATTTGTGACCTGAAACAG+TGG | 0.584225 | 3_1:+91897943 | None:intergenic |
| TTGCAGTAGAAATTGCATGC+AGG | 0.584908 | 3_1:-91895957 | Msa0387820:three_prime_UTR |
| ATTCATCCGATCTTCAACCA+TGG | 0.588342 | 3_1:-91897921 | Msa0387820:exon |
| CATATCAGGTTGAAATCAAG+AGG | 0.589740 | 3_1:-91897362 | Msa0387820:intron |
| TATGAAATATAATAGGTCAT+GGG | 0.590679 | 3_1:+91894482 | None:intergenic |
| TTGTCTAAGCGACATGCTAG+TGG | 0.593623 | 3_1:+91895869 | None:intergenic |
| GTAGGTTTAGCGATTATGGT+GGG | 0.596984 | 3_1:-91896325 | Msa0387820:CDS |
| TGCAGGAAAATCTTCATCGG+AGG | 0.597403 | 3_1:-91897766 | Msa0387820:intron |
| ATTTGGGTTTATCACTTATG+CGG | 0.598016 | 3_1:-91897548 | Msa0387820:CDS |
| TCTAGGGCACGTTCTTACAA+TGG | 0.598638 | 3_1:-91896437 | Msa0387820:CDS |
| GTAGGGCCATAACCTCCAGC+AGG | 0.600122 | 3_1:+91896377 | None:intergenic |
| AATCAAGAGGACTATTCCAA+AGG | 0.601418 | 3_1:-91897349 | Msa0387820:CDS |
| CTGGACCTCAAACACAAGAA+CGG | 0.610120 | 3_1:+91894638 | None:intergenic |
| ATCAGCTAACAAATTATCAA+CGG | 0.611456 | 3_1:+91896888 | None:intergenic |
| AGGGCACGTTCTTACAATGG+CGG | 0.614082 | 3_1:-91896434 | Msa0387820:CDS |
| CGACATACCGGTCGTCCTCG+AGG | 0.619903 | 3_1:-91897571 | Msa0387820:CDS |
| CTAAACATGTAACTAAATCG+TGG | 0.626478 | 3_1:+91895540 | None:intergenic |
| AAGGCAAGAGAATCAGATTG+TGG | 0.627472 | 3_1:-91894669 | Msa0387820:three_prime_UTR |
| TGTGACCTGAAACAGTGGGA+AGG | 0.629208 | 3_1:+91897948 | None:intergenic |
| GAAGTACTTTGAAAGGTATG+GGG | 0.631008 | 3_1:-91897623 | Msa0387820:CDS |
| GACCTGAAACAGTGGGAAGG+GGG | 0.631085 | 3_1:+91897951 | None:intergenic |
| AAAGTTAGGATAACAGCTAG+TGG | 0.632406 | 3_1:+91895123 | None:intergenic |
| GGACCCTATTCTAGTAGGGG+AGG | 0.635400 | 3_1:-91896035 | Msa0387820:CDS |
| TTAGCCAAAGATACAACCCT+AGG | 0.645736 | 3_1:-91897742 | Msa0387820:intron |
| AAATTTATTTCAGACAAACA+AGG | 0.646887 | 3_1:-91895181 | Msa0387820:three_prime_UTR |
| CATACCACTAAGCGTTCCCG+TGG | 0.650362 | 3_1:-91896943 | Msa0387820:CDS |
| AAAAGTTCCTCATGTCACAA+AGG | 0.657110 | 3_1:-91894688 | Msa0387820:three_prime_UTR |
| ACAAGGAACTTACTACAGGT+GGG | 0.658986 | 3_1:-91895914 | Msa0387820:three_prime_UTR |
| TGTAGTATATGGATTCTGAG+AGG | 0.659333 | 3_1:-91894918 | Msa0387820:three_prime_UTR |
| GGTTATGCGGGCTATAGAGG+AGG | 0.660221 | 3_1:-91896239 | Msa0387820:CDS |
| GTTTGGGGATAAAGGAGTCG+AGG | 0.661541 | 3_1:+91897979 | None:intergenic |
| CCCCATATAGAACCCACTAG+AGG | 0.662656 | 3_1:+91895323 | None:intergenic |
| GGGAACATGATTGATATGGA+TGG | 0.665118 | 3_1:-91896865 | Msa0387820:CDS |
| AAGTCCGATAACCCTCACTC+CGG | 0.666720 | 3_1:-91897890 | Msa0387820:CDS |
| GGAGGACCCTATTCTAGTAG+GGG | 0.666818 | 3_1:-91896038 | Msa0387820:CDS |
| CCGCTATGGATCCTACATGG+GGG | 0.674316 | 3_1:-91896192 | Msa0387820:CDS |
| TCGGGAAGAAAAGTGACTTG+AGG | 0.677675 | 3_1:+91895474 | None:intergenic |
| CACCACCATATCCACCACCA+AGG | 0.678240 | 3_1:+91896168 | None:intergenic |
| GGAGGTGGAGATGATTTCAG+TGG | 0.679386 | 3_1:-91896299 | Msa0387820:CDS |
| TCCCACCAAAACCAGCACCA+GGG | 0.688176 | 3_1:+91896063 | None:intergenic |
| GTGATAAACCCAAATCCTCG+AGG | 0.709143 | 3_1:+91897556 | None:intergenic |
| GAGATGTGCAGAAAATGCTG+AGG | 0.713425 | 3_1:-91894711 | Msa0387820:three_prime_UTR |
| GATTTGTGACCTGAAACAGT+GGG | 0.745795 | 3_1:+91897944 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATTTTTTATTTTAAATAA+TGG | - | chr3_1:91897630-91897649 | Msa0387820:CDS | 0.0% |
| !!! | TTCAGTATTATTTATTTTAT+AGG | - | chr3_1:91894779-91894798 | Msa0387820:three_prime_UTR | 10.0% |
| !! | AAATTGAAATTAGAAATTAT+TGG | - | chr3_1:91897033-91897052 | Msa0387820:intron | 10.0% |
| !! | AGTAATTTATGAAATATAAT+AGG | + | chr3_1:91897985-91898004 | None:intergenic | 10.0% |
| !!! | AAAACTAAGAAAATTTTTGT+TGG | - | chr3_1:91895154-91895173 | Msa0387820:three_prime_UTR | 15.0% |
| !! | AGTAGTAATAATAATAATTG+CGG | - | chr3_1:91895757-91895776 | Msa0387820:three_prime_UTR | 15.0% |
| !! | ATATCTAACTAAAATCTTAT+AGG | + | chr3_1:91896681-91896700 | None:intergenic | 15.0% |
| !! | TAAAAGTAAAAACTACAATT+AGG | + | chr3_1:91897201-91897220 | None:intergenic | 15.0% |
| !!! | ATTCAGTTGAATTTTTGATT+TGG | - | chr3_1:91895026-91895045 | Msa0387820:three_prime_UTR | 20.0% |
| !!! | TTCAGTTGAATTTTTGATTT+GGG | - | chr3_1:91895027-91895046 | Msa0387820:three_prime_UTR | 20.0% |
| !!! | TTAGTTTGGTTTGTTTATTT+AGG | - | chr3_1:91895623-91895642 | Msa0387820:three_prime_UTR | 20.0% |
| !!! | TAGTTTGGTTTGTTTATTTA+GGG | - | chr3_1:91895624-91895643 | Msa0387820:three_prime_UTR | 20.0% |
| !! | TTCTATTTATGAATGAATCT+AGG | - | chr3_1:91895906-91895925 | Msa0387820:three_prime_UTR | 20.0% |
| !!! | TATATTTTGTTAGTTAGCAT+CGG | - | chr3_1:91897094-91897113 | Msa0387820:intron | 20.0% |
| !!! | TGTTTTGTGAATTTTGTTTT+AGG | - | chr3_1:91897231-91897250 | Msa0387820:intron | 20.0% |
| !!! | TGTTTGTCTGAAATAAATTT+TGG | + | chr3_1:91897276-91897295 | None:intergenic | 20.0% |
| !! | AAATTTATTTCAGACAAACA+AGG | - | chr3_1:91897276-91897295 | Msa0387820:intron | 20.0% |
| !! | TTGTATTTCTTAATGAACTT+TGG | - | chr3_1:91897305-91897324 | Msa0387820:CDS | 20.0% |
| !!! | TAAACAGTCTTTTAAGATAA+TGG | - | chr3_1:91897598-91897617 | Msa0387820:CDS | 20.0% |
| !!! | TTTTTTCAATTTTGGATTTG+TGG | - | chr3_1:91897707-91897726 | Msa0387820:intron | 20.0% |
| !!! | TTTTCTAGAATTTATGAGAA+AGG | - | chr3_1:91897845-91897864 | Msa0387820:intron | 20.0% |
| !!! | TTTCTAGAATTTATGAGAAA+GGG | - | chr3_1:91897846-91897865 | Msa0387820:intron | 20.0% |
| !! | TATGAAATATAATAGGTCAT+GGG | + | chr3_1:91897978-91897997 | None:intergenic | 20.0% |
| !! | TTATGAAATATAATAGGTCA+TGG | + | chr3_1:91897979-91897998 | None:intergenic | 20.0% |
| !!! | ATAAATTACTGCCATTTTAA+TGG | - | chr3_1:91897995-91898014 | Msa0387820:five_prime_UTR | 20.0% |
| ! | AATAGTGAAAAAGAGAAATC+GGG | + | chr3_1:91894654-91894673 | None:intergenic | 25.0% |
| ! | GAATAGTGAAAAAGAGAAAT+CGG | + | chr3_1:91894655-91894674 | None:intergenic | 25.0% |
| !! | ACTAAGAAAATTTTTGTTGG+TGG | - | chr3_1:91895157-91895176 | Msa0387820:three_prime_UTR | 25.0% |
| ! | ATCAGCTAACAAATTATCAA+CGG | + | chr3_1:91895572-91895591 | None:intergenic | 25.0% |
| !!! | TTGATAATTTGTTAGCTGAT+GGG | - | chr3_1:91895572-91895591 | Msa0387820:three_prime_UTR | 25.0% |
| !!! | TAAATAGAACCTTTTTTCCT+TGG | + | chr3_1:91895895-91895914 | None:intergenic | 25.0% |
| ! | GATGAATTTGAAGATTTCTT+TGG | + | chr3_1:91895975-91895994 | None:intergenic | 25.0% |
| ! | TCATAAAACTATCTTGTGTA+AGG | + | chr3_1:91896473-91896492 | None:intergenic | 25.0% |
| ! | ACTAAAATTGACATCCATAA+TGG | + | chr3_1:91896744-91896763 | None:intergenic | 25.0% |
| !! | TTTTGTAACATCTTCGATAT+AGG | + | chr3_1:91896873-91896892 | None:intergenic | 25.0% |
| ! | AACTAATTGAGTGCTATAAT+AGG | + | chr3_1:91896953-91896972 | None:intergenic | 25.0% |
| ! | AATATAAGAATGTGTATGTC+AGG | + | chr3_1:91897080-91897099 | None:intergenic | 25.0% |
| !! | GTATGTTTCAAAGATTTTAG+AGG | + | chr3_1:91897380-91897399 | None:intergenic | 25.0% |
| ! | TTCAATATTCGATAATTGCT+TGG | + | chr3_1:91897467-91897486 | None:intergenic | 25.0% |
| ! | GTTTAACAAGTTGTAGTATA+TGG | - | chr3_1:91897528-91897547 | Msa0387820:CDS | 25.0% |
| !!! | TTGGTTGGTTTTTTCAATTT+TGG | - | chr3_1:91897699-91897718 | Msa0387820:intron | 25.0% |
| ATAGTGAAAAAGAGAAATCG+GGG | + | chr3_1:91894653-91894672 | None:intergenic | 30.0% | |
| TGAAAAGATGTTGATACCTA+GGG | + | chr3_1:91894734-91894753 | None:intergenic | 30.0% | |
| ATGAAAAGATGTTGATACCT+AGG | + | chr3_1:91894735-91894754 | None:intergenic | 30.0% | |
| !! | CTTTTGTGAAGTACTTTGAA+AGG | - | chr3_1:91894827-91894846 | Msa0387820:three_prime_UTR | 30.0% |
| ! | TGAAGTACTTTGAAAGGTAT+GGG | - | chr3_1:91894833-91894852 | Msa0387820:three_prime_UTR | 30.0% |
| ! | ATTTGGGTTTATCACTTATG+CGG | - | chr3_1:91894909-91894928 | Msa0387820:three_prime_UTR | 30.0% |
| TGTTGTTGATCAAGTTATTC+AGG | - | chr3_1:91894939-91894958 | Msa0387820:three_prime_UTR | 30.0% | |
| ACAAAGTGAAACCGTAATTA+GGG | + | chr3_1:91894997-91895016 | None:intergenic | 30.0% | |
| !! | TTGATTTGTCTGTTCATATC+AGG | - | chr3_1:91895081-91895100 | Msa0387820:three_prime_UTR | 30.0% |
| !!! | TTTGTTTTCGAGTGAAAGTA+TGG | - | chr3_1:91895321-91895340 | Msa0387820:three_prime_UTR | 30.0% |
| !!! | TTTGTTTTCGAGTGAAAGTA+TGG | - | chr3_1:91895321-91895340 | Msa0387820:three_prime_UTR | 30.0% |
| AAACTACAAAACCAAATCCA+CGG | + | chr3_1:91895534-91895553 | None:intergenic | 30.0% | |
| !!! | TGTAGTTTTTGATAGCGATA+AGG | - | chr3_1:91895546-91895565 | Msa0387820:three_prime_UTR | 30.0% |
| !! | GTTGATAATTTGTTAGCTGA+TGG | - | chr3_1:91895571-91895590 | Msa0387820:three_prime_UTR | 30.0% |
| ! | AGGGTGTTTAAAATTGAAAC+TGG | - | chr3_1:91895643-91895662 | Msa0387820:three_prime_UTR | 30.0% |
| !!! | TTTTTTCCTTGGTTTTGGTT+GGG | + | chr3_1:91895884-91895903 | None:intergenic | 30.0% |
| ! | TCATCTTCTTTTCCTTCATT+TGG | - | chr3_1:91895990-91896009 | Msa0387820:exon | 30.0% |
| !! | TTCATTTGGTAGTGATTCTA+GGG | - | chr3_1:91896004-91896023 | Msa0387820:CDS | 30.0% |
| AAAACTATCTTGTGTAAGGA+TGG | + | chr3_1:91896469-91896488 | None:intergenic | 30.0% | |
| ! | AAGCATTTTCTCTAGTTACA+AGG | - | chr3_1:91896526-91896545 | Msa0387820:intron | 30.0% |
| GATTGATGAAGTTCTATCTT+CGG | + | chr3_1:91896614-91896633 | None:intergenic | 30.0% | |
| AAGTTAGACTATCACCATTA+TGG | - | chr3_1:91896727-91896746 | Msa0387820:intron | 30.0% | |
| ATCTTTCCTATAGTTATGCT+TGG | - | chr3_1:91896843-91896862 | Msa0387820:intron | 30.0% | |
| ! | AGATGTTACAAAACCTTTTC+AGG | - | chr3_1:91896880-91896899 | Msa0387820:CDS | 30.0% |
| CTAAACATGTAACTAAATCG+TGG | + | chr3_1:91896920-91896939 | None:intergenic | 30.0% | |
| TGAAACCAAATAATGCCTAA+TGG | - | chr3_1:91897166-91897185 | Msa0387820:intron | 30.0% | |
| GAAACCAAATAATGCCTAAT+GGG | - | chr3_1:91897167-91897186 | Msa0387820:intron | 30.0% | |
| GACTATCAAAAAGCAAAGTT+AGG | + | chr3_1:91897351-91897370 | None:intergenic | 30.0% | |
| !!! | TTTGCTTTTTGATAGTCTTG+TGG | - | chr3_1:91897354-91897373 | Msa0387820:CDS | 30.0% |
| !! | CTTTGAAACATACCTTGATT+TGG | - | chr3_1:91897387-91897406 | Msa0387820:intron | 30.0% |
| !! | AACTTTTAGCTAACGATACA+TGG | - | chr3_1:91897441-91897460 | Msa0387820:intron | 30.0% |
| !! | ACAACTTGTTAAACGATTTG+TGG | + | chr3_1:91897522-91897541 | None:intergenic | 30.0% |
| TGTTAAATCGTCTTGACTAT+TGG | - | chr3_1:91897680-91897699 | Msa0387820:intron | 30.0% | |
| ! | CATAAATTCTAGAAAATCCC+TGG | + | chr3_1:91897841-91897860 | None:intergenic | 30.0% |
| !! | CTCATTTTTCGTTTTCATGC+AGG | - | chr3_1:91894674-91894693 | Msa0387820:three_prime_UTR | 35.0% |
| TCATGCAGGAAAATCTTCAT+CGG | - | chr3_1:91894688-91894707 | Msa0387820:three_prime_UTR | 35.0% | |
| ! | GTGAAGTACTTTGAAAGGTA+TGG | - | chr3_1:91894832-91894851 | Msa0387820:three_prime_UTR | 35.0% |
| ! | GAAGTACTTTGAAAGGTATG+GGG | - | chr3_1:91894834-91894853 | Msa0387820:three_prime_UTR | 35.0% |
| ! | AACTGATTCCGTTATCATGA+AGG | - | chr3_1:91894861-91894880 | Msa0387820:three_prime_UTR | 35.0% |
| ATGTCGATCCTTCATGATAA+CGG | + | chr3_1:91894872-91894891 | None:intergenic | 35.0% | |
| AGCAGGTAAAACCCTAATTA+CGG | - | chr3_1:91894983-91895002 | Msa0387820:three_prime_UTR | 35.0% | |
| CACAAAGTGAAACCGTAATT+AGG | + | chr3_1:91894998-91895017 | None:intergenic | 35.0% | |
| !! | CATATCAGGTTGAAATCAAG+AGG | - | chr3_1:91895095-91895114 | Msa0387820:three_prime_UTR | 35.0% |
| AATCAAGAGGACTATTCCAA+AGG | - | chr3_1:91895108-91895127 | Msa0387820:three_prime_UTR | 35.0% | |
| ATCAAGAGGACTATTCCAAA+GGG | - | chr3_1:91895109-91895128 | Msa0387820:three_prime_UTR | 35.0% | |
| AGCTTATTGTATGCTTGTCT+TGG | - | chr3_1:91895416-91895435 | Msa0387820:three_prime_UTR | 35.0% | |
| GCTTATTGTATGCTTGTCTT+GGG | - | chr3_1:91895417-91895436 | Msa0387820:three_prime_UTR | 35.0% | |
| AAGAACTTCTTCTCAAAGCA+TGG | - | chr3_1:91895460-91895479 | Msa0387820:three_prime_UTR | 35.0% | |
| AGAACTTCTTCTCAAAGCAT+GGG | - | chr3_1:91895461-91895480 | Msa0387820:three_prime_UTR | 35.0% | |
| AACTACAAAACCAAATCCAC+GGG | + | chr3_1:91895533-91895552 | None:intergenic | 35.0% | |
| TGATGGGAACATGATTGATA+TGG | - | chr3_1:91895588-91895607 | Msa0387820:three_prime_UTR | 35.0% | |
| GAACATAGGTTAGTGGAAAT+TGG | - | chr3_1:91895679-91895698 | Msa0387820:three_prime_UTR | 35.0% | |
| AAAGTGAGACATCACATTGA+TGG | + | chr3_1:91895797-91895816 | None:intergenic | 35.0% | |
| !!! | CTTTTTTCCTTGGTTTTGGT+TGG | + | chr3_1:91895885-91895904 | None:intergenic | 35.0% |
| CAACCAAAACCAAGGAAAAA+AGG | - | chr3_1:91895883-91895902 | Msa0387820:three_prime_UTR | 35.0% | |
| !!! | GAACCTTTTTTCCTTGGTTT+TGG | + | chr3_1:91895889-91895908 | None:intergenic | 35.0% |
| ! | TTGACTCGATTCTTTGTTGT+AGG | - | chr3_1:91895929-91895948 | Msa0387820:three_prime_UTR | 35.0% |
| CTAGAATCACTACCAAATGA+AGG | + | chr3_1:91896005-91896024 | None:intergenic | 35.0% | |
| !! | CTTCATTTGGTAGTGATTCT+AGG | - | chr3_1:91896003-91896022 | Msa0387820:CDS | 35.0% |
| AGTTACAAGGAACTTACTAC+AGG | - | chr3_1:91896539-91896558 | Msa0387820:intron | 35.0% | |
| GTGTGAATGTGTACTATTGT+AGG | - | chr3_1:91896779-91896798 | Msa0387820:intron | 35.0% | |
| !!! | ACCTTTTCAGGTTATATCAC+AGG | - | chr3_1:91896892-91896911 | Msa0387820:CDS | 35.0% |
| ACCTGTGATATAACCTGAAA+AGG | + | chr3_1:91896896-91896915 | None:intergenic | 35.0% | |
| ! | AGCACTCAATTAGTTTCAAC+AGG | - | chr3_1:91896958-91896977 | Msa0387820:CDS | 35.0% |
| TAACAATCAAACCAACCCTT+CGG | + | chr3_1:91897005-91897024 | None:intergenic | 35.0% | |
| TGTATGTCAGGATAAAGGTT+CGG | + | chr3_1:91897068-91897087 | None:intergenic | 35.0% | |
| GAATGTGTATGTCAGGATAA+AGG | + | chr3_1:91897073-91897092 | None:intergenic | 35.0% | |
| TTGATATTATCTGCCTCTAG+TGG | - | chr3_1:91897121-91897140 | Msa0387820:intron | 35.0% | |
| TGATATTATCTGCCTCTAGT+GGG | - | chr3_1:91897122-91897141 | Msa0387820:intron | 35.0% | |
| ATTAGGATATGATGCCCATT+AGG | + | chr3_1:91897184-91897203 | None:intergenic | 35.0% | |
| AAAGTTAGGATAACAGCTAG+TGG | + | chr3_1:91897337-91897356 | None:intergenic | 35.0% | |
| TAATCGACTACACCAAATCA+AGG | + | chr3_1:91897402-91897421 | None:intergenic | 35.0% | |
| TGTAGTATATGGATTCTGAG+AGG | - | chr3_1:91897539-91897558 | Msa0387820:CDS | 35.0% | |
| ! | GTAGTATATGGATTCTGAGA+GGG | - | chr3_1:91897540-91897559 | Msa0387820:CDS | 35.0% |
| !! | TTGCGTTCGTTTTGAATGTT+AGG | - | chr3_1:91897575-91897594 | Msa0387820:CDS | 35.0% |
| AAATCGTCTTGACTATTGGT+TGG | - | chr3_1:91897684-91897703 | Msa0387820:intron | 35.0% | |
| AAAAGTTCCTCATGTCACAA+AGG | - | chr3_1:91897769-91897788 | Msa0387820:intron | 35.0% | |
| TAACAAGCAACACATTGTCT+TGG | + | chr3_1:91897912-91897931 | None:intergenic | 35.0% | |
| GATTTGTGACCTGAAACAGT+GGG | + | chr3_1:91894516-91894535 | None:intergenic | 40.0% | |
| ! | TGATTTGTGACCTGAAACAG+TGG | + | chr3_1:91894517-91894536 | None:intergenic | 40.0% |
| ATTCATCCGATCTTCAACCA+TGG | - | chr3_1:91894536-91894555 | Msa0387820:three_prime_UTR | 40.0% | |
| TTAGCCAAAGATACAACCCT+AGG | - | chr3_1:91894715-91894734 | Msa0387820:three_prime_UTR | 40.0% | |
| GATACCTAGGGTTGTATCTT+TGG | + | chr3_1:91894722-91894741 | None:intergenic | 40.0% | |
| ATCATGAAGGATCGACATAC+CGG | - | chr3_1:91894874-91894893 | Msa0387820:three_prime_UTR | 40.0% | |
| TCACATCATCAATGACAAGC+AGG | - | chr3_1:91894966-91894985 | Msa0387820:three_prime_UTR | 40.0% | |
| ! | TTAGTTTGAGATGCACCCTT+TGG | + | chr3_1:91895127-91895146 | None:intergenic | 40.0% |
| ATTCCAGCAACTGTATCTGA+AGG | - | chr3_1:91895181-91895200 | Msa0387820:three_prime_UTR | 40.0% | |
| AAACCTTCAGATACAGTTGC+TGG | + | chr3_1:91895187-91895206 | None:intergenic | 40.0% | |
| CTCAAAGCATGGGAATGTTA+TGG | - | chr3_1:91895471-91895490 | Msa0387820:three_prime_UTR | 40.0% | |
| GGGAACATGATTGATATGGA+TGG | - | chr3_1:91895592-91895611 | Msa0387820:three_prime_UTR | 40.0% | |
| GATTGATATGGATGGTACTC+AGG | - | chr3_1:91895600-91895619 | Msa0387820:three_prime_UTR | 40.0% | |
| TACTGCTGAACATAGGTTAG+TGG | - | chr3_1:91895672-91895691 | Msa0387820:three_prime_UTR | 40.0% | |
| TTTGACGTGCAAAGATGTTG+TGG | - | chr3_1:91895703-91895722 | Msa0387820:three_prime_UTR | 40.0% | |
| TCACATTGATGGAAAGCAAC+AGG | + | chr3_1:91895786-91895805 | None:intergenic | 40.0% | |
| TCAGACACTTGCAATAACAC+TGG | + | chr3_1:91895821-91895840 | None:intergenic | 40.0% | |
| TTGCAAGTGTCTGACATATG+TGG | - | chr3_1:91895827-91895846 | Msa0387820:three_prime_UTR | 40.0% | |
| ! | GTTGTAGGTTGAGATCAAGA+AGG | - | chr3_1:91895944-91895963 | Msa0387820:three_prime_UTR | 40.0% |
| ! | GGTGGATTTGACGATTCTTA+TGG | - | chr3_1:91896050-91896069 | Msa0387820:CDS | 40.0% |
| ! | TCTTATGGAAGTTTTCCTGC+TGG | - | chr3_1:91896065-91896084 | Msa0387820:CDS | 40.0% |
| GTTATGGCCCTACATCTTAT+AGG | - | chr3_1:91896090-91896109 | Msa0387820:CDS | 40.0% | |
| CAAGCGACCTATAAGATGTA+GGG | + | chr3_1:91896100-91896119 | None:intergenic | 40.0% | |
| GTAGGTTTAGCGATTATGGT+GGG | - | chr3_1:91896132-91896151 | Msa0387820:CDS | 40.0% | |
| !! | TTTAGCGATTATGGTGGGTA+TGG | - | chr3_1:91896137-91896156 | Msa0387820:CDS | 40.0% |
| ! | GATGATTTCAGTGGTGGTTT+TGG | - | chr3_1:91896167-91896186 | Msa0387820:CDS | 40.0% |
| TAACCTCCCCTACTAGAATA+GGG | + | chr3_1:91896428-91896447 | None:intergenic | 40.0% | |
| ATAACCTCCCCTACTAGAAT+AGG | + | chr3_1:91896429-91896448 | None:intergenic | 40.0% | |
| TATTCTAGTAGGGGAGGTTA+TGG | - | chr3_1:91896428-91896447 | Msa0387820:CDS | 40.0% | |
| ATTCTAGTAGGGGAGGTTAT+GGG | - | chr3_1:91896429-91896448 | Msa0387820:CDS | 40.0% | |
| TTGCAGTAGAAATTGCATGC+AGG | - | chr3_1:91896500-91896519 | Msa0387820:CDS | 40.0% | |
| TACAAGGAACTTACTACAGG+TGG | - | chr3_1:91896542-91896561 | Msa0387820:intron | 40.0% | |
| ACAAGGAACTTACTACAGGT+GGG | - | chr3_1:91896543-91896562 | Msa0387820:intron | 40.0% | |
| CTTATAGGCTGATGACTGAT+GGG | + | chr3_1:91896666-91896685 | None:intergenic | 40.0% | |
| TCTTATAGGCTGATGACTGA+TGG | + | chr3_1:91896667-91896686 | None:intergenic | 40.0% | |
| !!! | AAGTCACTTTTCTTCCCGAA+GGG | - | chr3_1:91896987-91897006 | Msa0387820:CDS | 40.0% |
| AACAATCAAACCAACCCTTC+GGG | + | chr3_1:91897004-91897023 | None:intergenic | 40.0% | |
| GATGCCCATTAGGCATTATT+TGG | + | chr3_1:91897174-91897193 | None:intergenic | 40.0% | |
| ! | ATATGGATTCTGAGAGGGAT+TGG | - | chr3_1:91897545-91897564 | Msa0387820:CDS | 40.0% |
| TTCTGCACATCTCATTAGCA+TGG | + | chr3_1:91897739-91897758 | None:intergenic | 40.0% | |
| AAGGCAAGAGAATCAGATTG+TGG | - | chr3_1:91897788-91897807 | Msa0387820:intron | 40.0% | |
| ! | TCGAGGAAGAAGCTTGCTTA+GGG | + | chr3_1:91894464-91894483 | None:intergenic | 45.0% |
| TGGAAGCCATGGTTGAAGAT+CGG | + | chr3_1:91894545-91894564 | None:intergenic | 45.0% | |
| TGCAGGAAAATCTTCATCGG+AGG | - | chr3_1:91894691-91894710 | Msa0387820:three_prime_UTR | 45.0% | |
| GTGATAAACCCAAATCCTCG+AGG | + | chr3_1:91894904-91894923 | None:intergenic | 45.0% | |
| ! | GGATGGTACTCAGGTTAGTT+TGG | - | chr3_1:91895609-91895628 | Msa0387820:three_prime_UTR | 45.0% |
| GTGATGCTACTGCTGAACAT+AGG | - | chr3_1:91895665-91895684 | Msa0387820:three_prime_UTR | 45.0% | |
| CAAGTGTCTGACATATGTGG+CGG | - | chr3_1:91895830-91895849 | Msa0387820:three_prime_UTR | 45.0% | |
| AAGTGTCTGACATATGTGGC+GGG | - | chr3_1:91895831-91895850 | Msa0387820:three_prime_UTR | 45.0% | |
| TATCTGCCCAACCAAAACCA+AGG | - | chr3_1:91895875-91895894 | Msa0387820:three_prime_UTR | 45.0% | |
| ! | TCTAGGGCACGTTCTTACAA+TGG | - | chr3_1:91896020-91896039 | Msa0387820:CDS | 45.0% |
| ! | CGTTCTTACAATGGCGGTTT+TGG | - | chr3_1:91896029-91896048 | Msa0387820:CDS | 45.0% |
| !! | TCTTACAATGGCGGTTTTGG+TGG | - | chr3_1:91896032-91896051 | Msa0387820:CDS | 45.0% |
| ! | TATGGAAGTTTTCCTGCTGG+AGG | - | chr3_1:91896068-91896087 | Msa0387820:CDS | 45.0% |
| ! | AGTTTTCCTGCTGGAGGTTA+TGG | - | chr3_1:91896074-91896093 | Msa0387820:CDS | 45.0% |
| CCAAGCGACCTATAAGATGT+AGG | + | chr3_1:91896101-91896120 | None:intergenic | 45.0% | |
| CCTACATCTTATAGGTCGCT+TGG | - | chr3_1:91896098-91896117 | Msa0387820:CDS | 45.0% | |
| ACATCTTATAGGTCGCTTGG+AGG | - | chr3_1:91896101-91896120 | Msa0387820:CDS | 45.0% | |
| ! | TATAGGTCGCTTGGAGGTTT+TGG | - | chr3_1:91896107-91896126 | Msa0387820:CDS | 45.0% |
| GGTGGTAGGTTTAGCGATTA+TGG | - | chr3_1:91896128-91896147 | Msa0387820:CDS | 45.0% | |
| GGTAGGTTTAGCGATTATGG+TGG | - | chr3_1:91896131-91896150 | Msa0387820:CDS | 45.0% | |
| !!! | GATTTCAGTGGTGGTTTTGG+AGG | - | chr3_1:91896170-91896189 | Msa0387820:CDS | 45.0% |
| !!! | AGTGGTGGTTTTGGAGGTTA+TGG | - | chr3_1:91896176-91896195 | Msa0387820:CDS | 45.0% |
| AGAGGAGGAGAATCCTCATT+CGG | - | chr3_1:91896233-91896252 | Msa0387820:CDS | 45.0% | |
| GAATCCTCATTCGGTTACTC+TGG | - | chr3_1:91896242-91896261 | Msa0387820:CDS | 45.0% | |
| ACTGGTGGAGGTTATGAATC+TGG | - | chr3_1:91896371-91896390 | Msa0387820:CDS | 45.0% | |
| AGGAGGACCCTATTCTAGTA+GGG | - | chr3_1:91896418-91896437 | Msa0387820:CDS | 45.0% | |
| TTCTAGTAGGGGAGGTTATG+GGG | - | chr3_1:91896430-91896449 | Msa0387820:CDS | 45.0% | |
| TTGTCTAAGCGACATGCTAG+TGG | + | chr3_1:91896591-91896610 | None:intergenic | 45.0% | |
| GGCTCACCAAGCATAACTAT+AGG | + | chr3_1:91896852-91896871 | None:intergenic | 45.0% | |
| TCGGGAAGAAAAGTGACTTG+AGG | + | chr3_1:91896986-91897005 | None:intergenic | 45.0% | |
| !!! | CAAGTCACTTTTCTTCCCGA+AGG | - | chr3_1:91896986-91897005 | Msa0387820:CDS | 45.0% |
| !! | TGCCTCTAGTGGGTTCTATA+TGG | - | chr3_1:91897132-91897151 | Msa0387820:intron | 45.0% |
| !! | GCCTCTAGTGGGTTCTATAT+GGG | - | chr3_1:91897133-91897152 | Msa0387820:intron | 45.0% |
| !! | CCTCTAGTGGGTTCTATATG+GGG | - | chr3_1:91897134-91897153 | Msa0387820:intron | 45.0% |
| !! | CTCTAGTGGGTTCTATATGG+GGG | - | chr3_1:91897135-91897154 | Msa0387820:intron | 45.0% |
| GAGATGTGCAGAAAATGCTG+AGG | - | chr3_1:91897746-91897765 | Msa0387820:CDS | 45.0% | |
| TCTCTTGCCTTTGTGACATG+AGG | + | chr3_1:91897779-91897798 | None:intergenic | 45.0% | |
| ACATCCCGTTCTTGTGTTTG+AGG | - | chr3_1:91897814-91897833 | Msa0387820:intron | 45.0% | |
| TGGACCTCAAACACAAGAAC+GGG | + | chr3_1:91897821-91897840 | None:intergenic | 45.0% | |
| CTGGACCTCAAACACAAGAA+CGG | + | chr3_1:91897822-91897841 | None:intergenic | 45.0% | |
| ! | GTTCTTGTGTTTGAGGTCCA+GGG | - | chr3_1:91897821-91897840 | Msa0387820:intron | 45.0% |
| ! | GTCGAGGAAGAAGCTTGCTT+AGG | + | chr3_1:91894465-91894484 | None:intergenic | 50.0% |
| GTTTGGGGATAAAGGAGTCG+AGG | + | chr3_1:91894481-91894500 | None:intergenic | 50.0% | |
| !! | GGGAACTGGTTTGGGGATAA+AGG | + | chr3_1:91894489-91894508 | None:intergenic | 50.0% |
| TGACCTGAAACAGTGGGAAG+GGG | + | chr3_1:91894510-91894529 | None:intergenic | 50.0% | |
| GTGACCTGAAACAGTGGGAA+GGG | + | chr3_1:91894511-91894530 | None:intergenic | 50.0% | |
| TGTGACCTGAAACAGTGGGA+AGG | + | chr3_1:91894512-91894531 | None:intergenic | 50.0% | |
| ! | ATCGGACTTTCTGGAAGCCA+TGG | + | chr3_1:91894556-91894575 | None:intergenic | 50.0% |
| GTGAGGGTTATCGGACTTTC+TGG | + | chr3_1:91894565-91894584 | None:intergenic | 50.0% | |
| AAGTCCGATAACCCTCACTC+CGG | - | chr3_1:91894567-91894586 | Msa0387820:three_prime_UTR | 50.0% | |
| AAGAGAGAAGAGAGCGAACC+CGG | + | chr3_1:91894607-91894626 | None:intergenic | 50.0% | |
| AAATCCACGGGAACGCTTAG+TGG | + | chr3_1:91895521-91895540 | None:intergenic | 50.0% | |
| ACTAAGCGTTCCCGTGGATT+TGG | - | chr3_1:91895520-91895539 | Msa0387820:three_prime_UTR | 50.0% | |
| AGGGCACGTTCTTACAATGG+CGG | - | chr3_1:91896023-91896042 | Msa0387820:CDS | 50.0% | |
| !! | AGCGATTATGGTGGGTATGG+AGG | - | chr3_1:91896140-91896159 | Msa0387820:CDS | 50.0% |
| !! | GATTATGGTGGGTATGGAGG+TGG | - | chr3_1:91896143-91896162 | Msa0387820:CDS | 50.0% |
| GGAGGTGGAGATGATTTCAG+TGG | - | chr3_1:91896158-91896177 | Msa0387820:CDS | 50.0% | |
| GGTGGAGATGATTTCAGTGG+TGG | - | chr3_1:91896161-91896180 | Msa0387820:CDS | 50.0% | |
| !!! | GGTGGTTTTGGAGGTTATGG+AGG | - | chr3_1:91896179-91896198 | Msa0387820:CDS | 50.0% |
| TTTGGAGGTTATGGAGGCAG+TGG | - | chr3_1:91896185-91896204 | Msa0387820:CDS | 50.0% | |
| CAGGAGGACCCTATTCTAGT+AGG | - | chr3_1:91896417-91896436 | Msa0387820:CDS | 50.0% | |
| GGAGGACCCTATTCTAGTAG+GGG | - | chr3_1:91896419-91896438 | Msa0387820:CDS | 50.0% | |
| TCTAGTAGGGGAGGTTATGG+GGG | - | chr3_1:91896431-91896450 | Msa0387820:CDS | 50.0% | |
| ! | CACTTTTCTTCCCGAAGGGT+TGG | - | chr3_1:91896991-91897010 | Msa0387820:CDS | 50.0% |
| CCCCATATAGAACCCACTAG+AGG | + | chr3_1:91897137-91897156 | None:intergenic | 50.0% | |
| ! | CGTTCTTGTGTTTGAGGTCC+AGG | - | chr3_1:91897820-91897839 | Msa0387820:intron | 50.0% |
| ! | TGGGAAGGGGGAACTGGTTT+GGG | + | chr3_1:91894497-91894516 | None:intergenic | 55.0% |
| AAACAGTGGGAAGGGGGAAC+TGG | + | chr3_1:91894503-91894522 | None:intergenic | 55.0% | |
| TTCCCCCTTCCCACTGTTTC+AGG | - | chr3_1:91894504-91894523 | Msa0387820:three_prime_UTR | 55.0% | |
| GACCTGAAACAGTGGGAAGG+GGG | + | chr3_1:91894509-91894528 | None:intergenic | 55.0% | |
| AGAGAGAAGAGAGCGAACCC+GGG | + | chr3_1:91894606-91894625 | None:intergenic | 55.0% | |
| CACGGGAACGCTTAGTGGTA+TGG | + | chr3_1:91895516-91895535 | None:intergenic | 55.0% | |
| CATACCACTAAGCGTTCCCG+TGG | - | chr3_1:91895514-91895533 | Msa0387820:three_prime_UTR | 55.0% | |
| !! | AGGTCGCTTGGAGGTTTTGG+TGG | - | chr3_1:91896110-91896129 | Msa0387820:CDS | 55.0% |
| !! | CGCTTGGAGGTTTTGGTGGT+AGG | - | chr3_1:91896114-91896133 | Msa0387820:CDS | 55.0% |
| !! | TGGTGGTGCTGGTGGTTATG+CGG | - | chr3_1:91896205-91896224 | Msa0387820:CDS | 55.0% |
| ! | GGTGGTTATGCGGGCTATAG+AGG | - | chr3_1:91896215-91896234 | Msa0387820:CDS | 55.0% |
| ! | GGTTATGCGGGCTATAGAGG+AGG | - | chr3_1:91896218-91896237 | Msa0387820:CDS | 55.0% |
| TTCGGTTACTCTGGCCGCTA+TGG | - | chr3_1:91896251-91896270 | Msa0387820:CDS | 55.0% | |
| TGGCCGCTATGGATCCTACA+TGG | - | chr3_1:91896262-91896281 | Msa0387820:CDS | 55.0% | |
| GGCCGCTATGGATCCTACAT+GGG | - | chr3_1:91896263-91896282 | Msa0387820:CDS | 55.0% | |
| GCCGCTATGGATCCTACATG+GGG | - | chr3_1:91896264-91896283 | Msa0387820:CDS | 55.0% | |
| CCCCCATGTAGGATCCATAG+CGG | + | chr3_1:91896268-91896287 | None:intergenic | 55.0% | |
| CCGCTATGGATCCTACATGG+GGG | - | chr3_1:91896265-91896284 | Msa0387820:CDS | 55.0% | |
| CGCTATGGATCCTACATGGG+GGG | - | chr3_1:91896266-91896285 | Msa0387820:CDS | 55.0% | |
| CACCACCATATCCACCACCA+AGG | + | chr3_1:91896292-91896311 | None:intergenic | 55.0% | |
| !! | CTTGGTGGTGGATATGGTGG+TGG | - | chr3_1:91896290-91896309 | Msa0387820:CDS | 55.0% |
| !! | GTGGTGGATATGGTGGTGGT+GGG | - | chr3_1:91896294-91896313 | Msa0387820:CDS | 55.0% |
| !! | GGATATGGTGGTGGTGGGTT+AGG | - | chr3_1:91896299-91896318 | Msa0387820:CDS | 55.0% |
| !! | GTGGTGGGTTAGGCCCATAT+GGG | - | chr3_1:91896309-91896328 | Msa0387820:CDS | 55.0% |
| TTAGGCCCATATGGGAGAGG+TGG | - | chr3_1:91896317-91896336 | Msa0387820:CDS | 55.0% | |
| TATGGCGGTTATGGTGGTCC+AGG | - | chr3_1:91896347-91896366 | Msa0387820:CDS | 55.0% | |
| TCATAACCTCCACCAGTGCC+TGG | + | chr3_1:91896368-91896387 | None:intergenic | 55.0% | |
| GGAGGTTATGAATCTGGCCC+TGG | - | chr3_1:91896377-91896396 | Msa0387820:CDS | 55.0% | |
| TATGAATCTGGCCCTGGTGC+TGG | - | chr3_1:91896383-91896402 | Msa0387820:CDS | 55.0% | |
| TCCCACCAAAACCAGCACCA+GGG | + | chr3_1:91896397-91896416 | None:intergenic | 55.0% | |
| GGACCCTATTCTAGTAGGGG+AGG | - | chr3_1:91896422-91896441 | Msa0387820:CDS | 55.0% | |
| !! | GGGAAGGGGGAACTGGTTTG+GGG | + | chr3_1:91894496-91894515 | None:intergenic | 60.0% |
| GTGGGAAGGGGGAACTGGTT+TGG | + | chr3_1:91894498-91894517 | None:intergenic | 60.0% | |
| GTCGCCGGAGTGAGGGTTAT+CGG | + | chr3_1:91894574-91894593 | None:intergenic | 60.0% | |
| GATAACCCTCACTCCGGCGA+CGG | - | chr3_1:91894573-91894592 | Msa0387820:three_prime_UTR | 60.0% | |
| ACCGGTCGTCCTCGAGGATT+TGG | - | chr3_1:91894892-91894911 | Msa0387820:three_prime_UTR | 60.0% | |
| CCCAAATCCTCGAGGACGAC+CGG | + | chr3_1:91894896-91894915 | None:intergenic | 60.0% | |
| CCGGTCGTCCTCGAGGATTT+GGG | - | chr3_1:91894893-91894912 | Msa0387820:three_prime_UTR | 60.0% | |
| GTAGGGCCATAACCTCCAGC+AGG | + | chr3_1:91896083-91896102 | None:intergenic | 60.0% | |
| GGAGGTTATGGAGGCAGTGG+TGG | - | chr3_1:91896188-91896207 | Msa0387820:CDS | 60.0% | |
| ! | TATGGAGGCAGTGGTGGTGC+TGG | - | chr3_1:91896194-91896213 | Msa0387820:CDS | 60.0% |
| !! | GGTGGTGCTGGTGGTTATGC+GGG | - | chr3_1:91896206-91896225 | Msa0387820:CDS | 60.0% |
| GCGGCCAGAGTAACCGAATG+AGG | + | chr3_1:91896249-91896268 | None:intergenic | 60.0% | |
| !! | GGCCTTGGTGGTGGATATGG+TGG | - | chr3_1:91896287-91896306 | Msa0387820:CDS | 60.0% |
| !! | GGTGGTGGATATGGTGGTGG+TGG | - | chr3_1:91896293-91896312 | Msa0387820:CDS | 60.0% |
| !! | GGTGGTGGGTTAGGCCCATA+TGG | - | chr3_1:91896308-91896327 | Msa0387820:CDS | 60.0% |
| GGGTTAGGCCCATATGGGAG+AGG | - | chr3_1:91896314-91896333 | Msa0387820:CDS | 60.0% | |
| GCCCATATGGGAGAGGTGGT+GGG | - | chr3_1:91896321-91896340 | Msa0387820:CDS | 60.0% | |
| CCCCACCACCTCTCCCATAT+GGG | + | chr3_1:91896325-91896344 | None:intergenic | 60.0% | |
| CCCATATGGGAGAGGTGGTG+GGG | - | chr3_1:91896322-91896341 | Msa0387820:CDS | 60.0% | |
| ! | CCATATGGGAGAGGTGGTGG+GGG | - | chr3_1:91896323-91896342 | Msa0387820:CDS | 60.0% |
| GGTTATGGTGGTCCAGGCAC+TGG | - | chr3_1:91896353-91896372 | Msa0387820:CDS | 60.0% | |
| !! | TATGGTGGTCCAGGCACTGG+TGG | - | chr3_1:91896356-91896375 | Msa0387820:CDS | 60.0% |
| !!! | TCTGGCCCTGGTGCTGGTTT+TGG | - | chr3_1:91896389-91896408 | Msa0387820:CDS | 60.0% |
| !!! | GCCCTGGTGCTGGTTTTGGT+GGG | - | chr3_1:91896393-91896412 | Msa0387820:CDS | 60.0% |
| GTCCCACCAAAACCAGCACC+AGG | + | chr3_1:91896398-91896417 | None:intergenic | 60.0% | |
| !!! | GGTGCTGGTTTTGGTGGGAC+AGG | - | chr3_1:91896398-91896417 | Msa0387820:CDS | 60.0% |
| !!! | GCTGGTTTTGGTGGGACAGG+AGG | - | chr3_1:91896401-91896420 | Msa0387820:CDS | 60.0% |
| GAAGAGAGCGAACCCGGGAC+TGG | + | chr3_1:91894601-91894620 | None:intergenic | 65.0% | |
| CGACATACCGGTCGTCCTCG+AGG | - | chr3_1:91894886-91894905 | Msa0387820:three_prime_UTR | 65.0% | |
| GGATCCTACATGGGGGGCCT+TGG | - | chr3_1:91896272-91896291 | Msa0387820:CDS | 65.0% | |
| TCCTACATGGGGGGCCTTGG+TGG | - | chr3_1:91896275-91896294 | Msa0387820:CDS | 65.0% | |
| ACCACCAAGGCCCCCCATGT+AGG | + | chr3_1:91896279-91896298 | None:intergenic | 65.0% | |
| TACATGGGGGGCCTTGGTGG+TGG | - | chr3_1:91896278-91896297 | Msa0387820:CDS | 65.0% | |
| !! | GGGGGCCTTGGTGGTGGATA+TGG | - | chr3_1:91896284-91896303 | Msa0387820:CDS | 65.0% |
| GGCCCATATGGGAGAGGTGG+TGG | - | chr3_1:91896320-91896339 | Msa0387820:CDS | 65.0% | |
| CCCCCACCACCTCTCCCATA+TGG | + | chr3_1:91896326-91896345 | None:intergenic | 65.0% | |
| !! | AGAGGTGGTGGGGGCTATGG+CGG | - | chr3_1:91896332-91896351 | Msa0387820:CDS | 65.0% |
| GGTGGGGGCTATGGCGGTTA+TGG | - | chr3_1:91896338-91896357 | Msa0387820:CDS | 65.0% | |
| GGGGGCTATGGCGGTTATGG+TGG | - | chr3_1:91896341-91896360 | Msa0387820:CDS | 65.0% | |
| !!! | GGCCCTGGTGCTGGTTTTGG+TGG | - | chr3_1:91896392-91896411 | Msa0387820:CDS | 65.0% |
| ! | GGAGGCAGTGGTGGTGCTGG+TGG | - | chr3_1:91896197-91896216 | Msa0387820:CDS | 70.0% |
| !! | GGGAGAGGTGGTGGGGGCTA+TGG | - | chr3_1:91896329-91896348 | Msa0387820:CDS | 70.0% |
| !! | GGTGGTCCAGGCACTGGTGG+AGG | - | chr3_1:91896359-91896378 | Msa0387820:CDS | 70.0% |
| TGGCGCCGTCGCCGGAGTGA+GGG | + | chr3_1:91894581-91894600 | None:intergenic | 75.0% | |
| ! | CTGGCGCCGTCGCCGGAGTG+AGG | + | chr3_1:91894582-91894601 | None:intergenic | 80.0% |
| ! | TCCGGCGACGGCGCCAGTCC+CGG | - | chr3_1:91894585-91894604 | Msa0387820:three_prime_UTR | 80.0% |
| !! | CCCGGGACTGGCGCCGTCGC+CGG | + | chr3_1:91894589-91894608 | None:intergenic | 85.0% |
| ! | CCGGCGACGGCGCCAGTCCC+GGG | - | chr3_1:91894586-91894605 | Msa0387820:three_prime_UTR | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 91894458 | 91898021 | 91894458 | ID=Msa0387820;Name=Msa0387820 |
| chr3_1 | mRNA | 91894458 | 91898021 | 91894458 | ID=Msa0387820-mRNA-1;Parent=Msa0387820;Name=Msa0387820-mRNA-1;_AED=0.08;_eAED=0.08;_QI=97|1|1|1|1|1|6|1537|353 |
| chr3_1 | exon | 91894458 | 91896528 | 91894458 | ID=Msa0387820-mRNA-1:exon:25771;Parent=Msa0387820-mRNA-1 |
| chr3_1 | exon | 91896858 | 91897027 | 91896858 | ID=Msa0387820-mRNA-1:exon:25770;Parent=Msa0387820-mRNA-1 |
| chr3_1 | exon | 91897277 | 91897376 | 91897277 | ID=Msa0387820-mRNA-1:exon:25769;Parent=Msa0387820-mRNA-1 |
| chr3_1 | exon | 91897492 | 91897655 | 91897492 | ID=Msa0387820-mRNA-1:exon:25768;Parent=Msa0387820-mRNA-1 |
| chr3_1 | exon | 91897743 | 91897783 | 91897743 | ID=Msa0387820-mRNA-1:exon:25767;Parent=Msa0387820-mRNA-1 |
| chr3_1 | exon | 91897872 | 91898021 | 91897872 | ID=Msa0387820-mRNA-1:exon:25766;Parent=Msa0387820-mRNA-1 |
| chr3_1 | five_prime_UTR | 91897925 | 91898021 | 91897925 | ID=Msa0387820-mRNA-1:five_prime_utr;Parent=Msa0387820-mRNA-1 |
| chr3_1 | CDS | 91897872 | 91897924 | 91897872 | ID=Msa0387820-mRNA-1:cds;Parent=Msa0387820-mRNA-1 |
| chr3_1 | CDS | 91897743 | 91897783 | 91897743 | ID=Msa0387820-mRNA-1:cds;Parent=Msa0387820-mRNA-1 |
| chr3_1 | CDS | 91897492 | 91897655 | 91897492 | ID=Msa0387820-mRNA-1:cds;Parent=Msa0387820-mRNA-1 |
| chr3_1 | CDS | 91897277 | 91897376 | 91897277 | ID=Msa0387820-mRNA-1:cds;Parent=Msa0387820-mRNA-1 |
| chr3_1 | CDS | 91896858 | 91897027 | 91896858 | ID=Msa0387820-mRNA-1:cds;Parent=Msa0387820-mRNA-1 |
| chr3_1 | CDS | 91895995 | 91896528 | 91895995 | ID=Msa0387820-mRNA-1:cds;Parent=Msa0387820-mRNA-1 |
| chr3_1 | three_prime_UTR | 91894458 | 91895994 | 91894458 | ID=Msa0387820-mRNA-1:three_prime_utr;Parent=Msa0387820-mRNA-1 |
| Gene Sequence |
| Protein sequence |
