Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0448030 | XP_003599417.1 | 96.008 | 501 | 18 | 1 | 1 | 499 | 1 | 501 | 0.0 | 990 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0448030 | sp|Q9FNA2|PAO1_ARATH | 75.391 | 447 | 96 | 2 | 23 | 469 | 20 | 452 | 0.0 | 706 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0448030 | G7J0U8 | 96.008 | 501 | 18 | 1 | 1 | 499 | 1 | 501 | 0.0 | 990 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0401260 | Msa0448030 | 0.823139 | 1.626731e-53 | -8.615850e-47 |
| Msa0448030 | Msa0496040 | 0.816613 | 5.052044e-52 | -8.615850e-47 |
| Msa0448030 | Msa0560280 | 0.816839 | 4.496452e-52 | -8.615850e-47 |
| Msa0448030 | Msa0614290 | 0.811482 | 6.847915e-51 | -8.615850e-47 |
| Msa0448030 | Msa0638820 | 0.800054 | 1.724999e-48 | -8.615850e-47 |
| Msa0448030 | Msa0672950 | 0.800878 | 1.172353e-48 | -8.615850e-47 |
| Msa0448030 | Msa0697510 | 0.816883 | 4.394190e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0448030 | MtrunA17_Chr3g0089841 | 96.008 | 501 | 18 | 1 | 1 | 499 | 1 | 501 | 0.0 | 990 |
| Msa0448030 | MtrunA17_Chr3g0109701 | 27.381 | 504 | 300 | 16 | 1 | 470 | 20 | 491 | 3.62e-38 | 145 |
| Msa0448030 | MtrunA17_Chr5g0442341 | 29.167 | 432 | 258 | 15 | 33 | 442 | 53 | 458 | 5.97e-34 | 134 |
| Msa0448030 | MtrunA17_Chr6g0484711 | 25.519 | 482 | 298 | 16 | 2 | 446 | 215 | 672 | 5.05e-31 | 127 |
| Msa0448030 | MtrunA17_Chr3g0095231 | 27.669 | 459 | 281 | 18 | 33 | 468 | 53 | 483 | 1.32e-30 | 124 |
| Msa0448030 | MtrunA17_Chr3g0100181 | 26.439 | 469 | 262 | 21 | 6 | 431 | 158 | 586 | 2.45e-30 | 125 |
| Msa0448030 | MtrunA17_Chr8g0360771 | 25.176 | 425 | 270 | 16 | 33 | 431 | 187 | 589 | 1.25e-23 | 104 |
| Msa0448030 | MtrunA17_Chr1g0171381 | 26.378 | 254 | 162 | 9 | 196 | 431 | 392 | 638 | 2.09e-21 | 98.2 |
| Msa0448030 | MtrunA17_Chr3g0142301 | 26.693 | 251 | 170 | 7 | 215 | 454 | 1113 | 1360 | 7.40e-21 | 96.7 |
| Msa0448030 | MtrunA17_Chr1g0155921 | 26.357 | 258 | 177 | 7 | 229 | 481 | 1134 | 1383 | 1.28e-20 | 96.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0448030 | AT5G13700.1 | 75.391 | 447 | 96 | 2 | 23 | 469 | 20 | 452 | 0.0 | 706 |
| Msa0448030 | AT3G59050.1 | 27.826 | 460 | 273 | 16 | 1 | 431 | 23 | 452 | 5.76e-42 | 156 |
| Msa0448030 | AT1G65840.1 | 28.508 | 449 | 283 | 13 | 6 | 435 | 28 | 457 | 2.05e-40 | 152 |
| Msa0448030 | AT2G43020.1 | 28.046 | 435 | 266 | 15 | 20 | 431 | 41 | 451 | 7.96e-37 | 142 |
| Msa0448030 | AT1G62830.1 | 25.000 | 472 | 301 | 17 | 2 | 443 | 261 | 709 | 4.30e-30 | 125 |
| Msa0448030 | AT3G10390.4 | 24.547 | 497 | 308 | 20 | 4 | 460 | 182 | 651 | 5.30e-28 | 118 |
| Msa0448030 | AT3G10390.2 | 24.547 | 497 | 308 | 20 | 4 | 460 | 234 | 703 | 7.04e-28 | 118 |
| Msa0448030 | AT3G10390.1 | 24.547 | 497 | 308 | 20 | 4 | 460 | 182 | 651 | 7.74e-28 | 118 |
| Msa0448030 | AT3G10390.3 | 24.547 | 497 | 308 | 20 | 4 | 460 | 234 | 703 | 8.66e-28 | 118 |
| Msa0448030 | AT4G16310.2 | 26.937 | 271 | 175 | 6 | 190 | 454 | 865 | 1118 | 1.01e-24 | 109 |
| Msa0448030 | AT4G16310.3 | 26.937 | 271 | 175 | 6 | 190 | 454 | 865 | 1118 | 1.01e-24 | 109 |
| Msa0448030 | AT4G16310.5 | 26.937 | 271 | 175 | 6 | 190 | 454 | 865 | 1118 | 1.01e-24 | 109 |
| Msa0448030 | AT4G16310.1 | 26.937 | 271 | 175 | 6 | 190 | 454 | 865 | 1118 | 1.01e-24 | 109 |
| Msa0448030 | AT4G16310.4 | 26.937 | 271 | 175 | 6 | 190 | 454 | 865 | 1118 | 1.01e-24 | 109 |
| Msa0448030 | AT3G13682.1 | 29.075 | 454 | 265 | 21 | 8 | 431 | 161 | 587 | 2.54e-24 | 107 |
| Msa0448030 | AT4G29720.1 | 22.826 | 276 | 164 | 5 | 215 | 442 | 256 | 530 | 8.45e-11 | 64.7 |
Find 144 sgRNAs with CRISPR-Local
Find 616 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGATATTGGAGACTGTTTC+TGG | 0.094196 | 3_3:+26995916 | None:intergenic |
| ATATCAACATATGTAGATTT+TGG | 0.133651 | 3_3:-27003785 | Msa0448030:CDS |
| CTCTTCTCTCACACATTTCA+TGG | 0.203556 | 3_3:-27005905 | Msa0448030:exon |
| CTTCCTTATTTCTTCTACTA+AGG | 0.243305 | 3_3:+26996020 | None:intergenic |
| TCATATCATAATATGGCTTC+TGG | 0.249253 | 3_3:+26995844 | None:intergenic |
| GGAGAGGCTATTACACATTT+TGG | 0.259480 | 3_3:-26999486 | Msa0448030:CDS |
| TGAAGTTTCCGTATAGGTTT+TGG | 0.285338 | 3_3:-26999552 | Msa0448030:CDS |
| CACACCAGTGAAAGATTTAA+TGG | 0.285891 | 3_3:-26996433 | Msa0448030:CDS |
| CTTGTATTGCAAGTAAAATT+AGG | 0.292745 | 3_3:+26995506 | None:intergenic |
| AAATCTACATATGTTGATAT+TGG | 0.297876 | 3_3:+27003788 | None:intergenic |
| CGATTACTTGCTATACAAAA+TGG | 0.298129 | 3_3:-27003726 | Msa0448030:CDS |
| AATATCGCATTTGTGGATAT+TGG | 0.304813 | 3_3:+26995903 | None:intergenic |
| TGCTTTGTTGCCATCATCAT+TGG | 0.306407 | 3_3:+27004631 | None:intergenic |
| TTCTTGAATGTTGCAATTCC+CGG | 0.314171 | 3_3:+27000916 | None:intergenic |
| CGTAGAAGACATAGTGATTC+TGG | 0.315580 | 3_3:-27005685 | Msa0448030:CDS |
| AAGCCTTAGTAGAAGAAATA+AGG | 0.318756 | 3_3:-26996023 | Msa0448030:CDS |
| AACAGACAGAATCACATAAT+TGG | 0.318861 | 3_3:+27000851 | None:intergenic |
| TTAGTTCATTCCACTCCTAA+TGG | 0.327824 | 3_3:-26995650 | Msa0448030:three_prime_UTR |
| CATATAGTCATATCATAATA+TGG | 0.329367 | 3_3:+26995837 | None:intergenic |
| TTCCCCGCTGGTGGAATAAC+AGG | 0.331812 | 3_3:-26997340 | Msa0448030:CDS |
| CTCGGTGCCGGTTGGATCGC+TGG | 0.340198 | 3_3:-27005600 | Msa0448030:CDS |
| GTCAATAGCGTCGGGGATGT+TGG | 0.343182 | 3_3:+26997370 | None:intergenic |
| AAGGTTCCAACAATAGAGTT+TGG | 0.355586 | 3_3:+26995974 | None:intergenic |
| TCTTTCTGAAGTTTCCGTAT+AGG | 0.358661 | 3_3:-26999558 | Msa0448030:CDS |
| CAATGTCACGACTAAGATAT+TGG | 0.359806 | 3_3:+26997481 | None:intergenic |
| CCACATGGCCAAAACCTATA+CGG | 0.371294 | 3_3:+26999544 | None:intergenic |
| ACTTTACGATTGGAGATAAT+CGG | 0.378806 | 3_3:+26997290 | None:intergenic |
| TCCGGATCCTGCCGCCGATT+CGG | 0.382651 | 3_3:+27005652 | None:intergenic |
| ACCGAATCGGCGGCAGGATC+CGG | 0.385533 | 3_3:-27005653 | Msa0448030:CDS |
| GCGGAAGTTACCGGAGATTC+CGG | 0.391815 | 3_3:+27005846 | None:intergenic |
| GTCGTGAAGCTAATCCTGTT+TGG | 0.396223 | 3_3:-27005569 | Msa0448030:CDS |
| TTAACCTAGTTGGCTCCATT+AGG | 0.400382 | 3_3:+26995635 | None:intergenic |
| CATATTATGATATGACTATA+TGG | 0.402514 | 3_3:-26995836 | Msa0448030:exon |
| GTACATGGCGGATATCTTGC+AGG | 0.403332 | 3_3:-26996406 | Msa0448030:intron |
| GCGAGTTCTACTGGCGTCTT+AGG | 0.406999 | 3_3:+27004412 | None:intergenic |
| TATATGTTGGTGAGGTTAAG+AGG | 0.410503 | 3_3:-26995705 | Msa0448030:three_prime_UTR |
| AAATCAATGGCGAGTTCTAC+TGG | 0.413846 | 3_3:+27004403 | None:intergenic |
| GAGAAGCTATGGCGGTGCTC+AGG | 0.428843 | 3_3:-26997406 | Msa0448030:CDS |
| CGGAAACTTCAGAAAGATCT+TGG | 0.431867 | 3_3:+26999564 | None:intergenic |
| TCGTGAAGCTAATCCTGTTT+GGG | 0.433490 | 3_3:-27005568 | Msa0448030:CDS |
| TGAAAGCCAAACTCTATTGT+TGG | 0.437206 | 3_3:-26995980 | Msa0448030:CDS |
| TCAATAGCGTCGGGGATGTT+GGG | 0.439206 | 3_3:+26997371 | None:intergenic |
| CATATCATAATATGGCTTCT+GGG | 0.444639 | 3_3:+26995845 | None:intergenic |
| ATAAGTAAGATTACAATGTA+AGG | 0.447759 | 3_3:-26995552 | Msa0448030:three_prime_UTR |
| CACTCCTAATGGAGCCAACT+AGG | 0.452521 | 3_3:-26995639 | Msa0448030:three_prime_UTR |
| GAATTGCAACATTCAAGAAA+TGG | 0.457567 | 3_3:-27000912 | Msa0448030:CDS |
| ATTACAAGAATCGTAATTGA+TGG | 0.459438 | 3_3:-26995790 | Msa0448030:three_prime_UTR |
| ATGGAATTATACAGGTCGTC+CGG | 0.460415 | 3_3:-27000935 | Msa0448030:intron |
| CGGTGGAACTCGGTGCCGGT+TGG | 0.464338 | 3_3:-27005608 | Msa0448030:CDS |
| CATTACATCACATTTCTCAA+TGG | 0.466921 | 3_3:+26999594 | None:intergenic |
| CGCCACCGAAACATTCCTTC+CGG | 0.467581 | 3_3:+27005634 | None:intergenic |
| TTGGCCATGTGGACCCGAAA+AGG | 0.467710 | 3_3:-26999533 | Msa0448030:CDS |
| TTATATCTGAGTGGCAAGCT+TGG | 0.468336 | 3_3:-26995871 | Msa0448030:CDS |
| ATCATCGGCGCCGGAATCTC+CGG | 0.471467 | 3_3:-27005856 | Msa0448030:intron |
| GATGACGGAGGAGCGATTAG+TGG | 0.475665 | 3_3:+27005879 | None:intergenic |
| GCCGGTTGGATCGCTGGTGT+TGG | 0.475999 | 3_3:-27005594 | Msa0448030:CDS |
| GAACCTTTGCTAGCATTGAC+AGG | 0.480559 | 3_3:-26995958 | Msa0448030:CDS |
| ACAAGTATGTCAATAGCGTC+GGG | 0.480932 | 3_3:+26997362 | None:intergenic |
| TCTTTCACTGGTGTGCTCTC+CGG | 0.484186 | 3_3:+26996441 | None:intergenic |
| GCGGTGCTCAGGGATATGTT+TGG | 0.484250 | 3_3:-26997395 | Msa0448030:CDS |
| GTGTAGGAATATCGCATTTG+TGG | 0.485006 | 3_3:+26995896 | None:intergenic |
| CACATCGGAAGGTAGAATCT+TGG | 0.485410 | 3_3:-27003687 | Msa0448030:CDS |
| TACTGGTAAGGGTGGATTGA+AGG | 0.489901 | 3_3:+27000797 | None:intergenic |
| TGAAGGCAAGTAGGTCACTT+TGG | 0.491175 | 3_3:+27000814 | None:intergenic |
| TGAACAGCGAGTTCCCAAAC+AGG | 0.493183 | 3_3:+27005555 | None:intergenic |
| GACTTTCTCTTCACATCGGA+AGG | 0.497849 | 3_3:-27003698 | Msa0448030:CDS |
| ATTGAGAAAACGTACTGGTA+AGG | 0.498411 | 3_3:+27000785 | None:intergenic |
| TTCTCTCAAGGTCTCTTCAT+CGG | 0.500684 | 3_3:+26997424 | None:intergenic |
| GTGATTCTGTCTGTTAGCAT+TGG | 0.501514 | 3_3:-27000843 | Msa0448030:CDS |
| AGGATCCGGAAGGAATGTTT+CGG | 0.502754 | 3_3:-27005639 | Msa0448030:CDS |
| CGCTCCTCCGTCATCATCAT+CGG | 0.505916 | 3_3:-27005871 | Msa0448030:CDS |
| CTGGAAGCGTCGGACCGAAT+CGG | 0.507596 | 3_3:-27005666 | Msa0448030:CDS |
| TCCAACACCAGCGATCCAAC+CGG | 0.512194 | 3_3:+27005593 | None:intergenic |
| TTGACATACTTGTTCCCCGC+TGG | 0.514737 | 3_3:-26997352 | Msa0448030:CDS |
| CGTCGGACCGAATCGGCGGC+AGG | 0.516972 | 3_3:-27005659 | Msa0448030:CDS |
| GTGTCGGTGGAACTCGGTGC+CGG | 0.518469 | 3_3:-27005612 | Msa0448030:CDS |
| GGAGTTGTAGAGAATCCTCT+TGG | 0.518489 | 3_3:-26995815 | Msa0448030:three_prime_UTR |
| AACAAGTATGTCAATAGCGT+CGG | 0.519584 | 3_3:+26997361 | None:intergenic |
| GTGAAGAAAATGCGACCGAC+AGG | 0.520337 | 3_3:+26996463 | None:intergenic |
| GCGAAAGTGTTAGCCGAAAA+CGG | 0.521957 | 3_3:-27005708 | Msa0448030:CDS |
| CACATGGATAATGCCTATCC+TGG | 0.522333 | 3_3:-26997506 | Msa0448030:CDS |
| AGAAGCTATGGCGGTGCTCA+GGG | 0.523544 | 3_3:-26997405 | Msa0448030:CDS |
| ATAGCCATTAAATCTTTCAC+TGG | 0.524970 | 3_3:+26996429 | None:intergenic |
| ACATACTTGTTCCCCGCTGG+TGG | 0.527068 | 3_3:-26997349 | Msa0448030:CDS |
| TCCGTCATCATCATCGGCGC+CGG | 0.529667 | 3_3:-27005865 | Msa0448030:CDS |
| AAACCTGTTATTCCACCAGC+GGG | 0.532910 | 3_3:+26997337 | None:intergenic |
| GATTTGCTTAACATTATAGC+GGG | 0.532975 | 3_3:+27005965 | None:intergenic |
| GGTGGCGTGTCGGTGGAACT+CGG | 0.534783 | 3_3:-27005618 | Msa0448030:CDS |
| TTGGTGAGGTTAAGAGGTGA+TGG | 0.535422 | 3_3:-26995699 | Msa0448030:three_prime_UTR |
| TTGAGAAAACGTACTGGTAA+GGG | 0.538437 | 3_3:+27000786 | None:intergenic |
| AGATTTAATGGCTATGTACA+TGG | 0.545471 | 3_3:-26996421 | Msa0448030:CDS |
| TAAGATATTGGAGCCAGGAT+AGG | 0.546167 | 3_3:+26997493 | None:intergenic |
| TGGAATTATACAGGTCGTCC+GGG | 0.549725 | 3_3:-27000934 | Msa0448030:intron |
| GATGATGAAGCCAATGATGA+TGG | 0.554008 | 3_3:-27004641 | Msa0448030:CDS |
| ACATTCAAGAAATGGTGTTA+CGG | 0.556836 | 3_3:-27000904 | Msa0448030:CDS |
| ATGTTTCGGTGGCGTGTCGG+TGG | 0.559971 | 3_3:-27005625 | Msa0448030:CDS |
| TTAGTCGTGACATTGACAAA+TGG | 0.565589 | 3_3:-26997473 | Msa0448030:CDS |
| CCACTCAGATATAATTGTGT+AGG | 0.567769 | 3_3:+26995880 | None:intergenic |
| AAATGGTGTTACGGTGATCA+CGG | 0.568810 | 3_3:-27000895 | Msa0448030:CDS |
| AGAGACCTTGAGAGAAGCTA+TGG | 0.571528 | 3_3:-26997417 | Msa0448030:CDS |
| ATCATGCAGAATGAAATCAA+TGG | 0.573821 | 3_3:+27004390 | None:intergenic |
| GGTTGGATCGCTGGTGTTGG+AGG | 0.575776 | 3_3:-27005591 | Msa0448030:CDS |
| ACGACTAAGATATTGGAGCC+AGG | 0.581060 | 3_3:+26997488 | None:intergenic |
| GCTTCAACATCTATGATCAA+AGG | 0.581866 | 3_3:-27005491 | Msa0448030:intron |
| TACTGAAGTATATGTTGGTG+AGG | 0.582353 | 3_3:-26995713 | Msa0448030:three_prime_UTR |
| TATATGTTTCAGGCTCCTGT+CGG | 0.582648 | 3_3:-26996478 | Msa0448030:intron |
| CATCATTGCATGGTGAGTCA+TGG | 0.582682 | 3_3:-26995758 | Msa0448030:three_prime_UTR |
| CATTGAGAAATGTGATGTAA+TGG | 0.583606 | 3_3:-26999593 | Msa0448030:CDS |
| GGAATGTTTCGGTGGCGTGT+CGG | 0.590537 | 3_3:-27005628 | Msa0448030:CDS |
| GAGTCAGCTGCGATTCCACT+CGG | 0.597286 | 3_3:+27004719 | None:intergenic |
| GATCCTGTCAATGCTAGCAA+AGG | 0.602229 | 3_3:+26995955 | None:intergenic |
| CTTAGTAGAAGAAATAAGGA+AGG | 0.603338 | 3_3:-26996019 | Msa0448030:CDS |
| AGGGTGGATTGAAGGCAAGT+AGG | 0.612427 | 3_3:+27000805 | None:intergenic |
| AGAATTTGCACTTACAACGA+CGG | 0.612960 | 3_3:+27004602 | None:intergenic |
| CTAGTTGGCTCCATTAGGAG+TGG | 0.614630 | 3_3:+26995640 | None:intergenic |
| CATAGTGATTCTGGAAGCGT+CGG | 0.615402 | 3_3:-27005676 | Msa0448030:CDS |
| CAAAATACTGAAGTATATGT+TGG | 0.621622 | 3_3:-26995718 | Msa0448030:three_prime_UTR |
| CGATTCTTGTAATTTCCAAG+AGG | 0.623537 | 3_3:+26995800 | None:intergenic |
| AGAAAACGTACTGGTAAGGG+TGG | 0.625810 | 3_3:+27000789 | None:intergenic |
| TGATTTGCTTAACATTATAG+CGG | 0.629449 | 3_3:+27005964 | None:intergenic |
| GTTACGGTGATCACGGAAGA+TGG | 0.630346 | 3_3:-27000888 | Msa0448030:CDS |
| AAATGGAGAATCAAAACGCG+TGG | 0.633921 | 3_3:-26997456 | Msa0448030:CDS |
| ATCTATGCTCACGAGCGGAG+AGG | 0.634203 | 3_3:-26999502 | Msa0448030:CDS |
| AATCGGCGGCAGGATCCGGA+AGG | 0.636271 | 3_3:-27005649 | Msa0448030:CDS |
| CACCGCCATAGCTTCTCTCA+AGG | 0.636491 | 3_3:+26997412 | None:intergenic |
| ATCCGGAAGGAATGTTTCGG+TGG | 0.636801 | 3_3:-27005636 | Msa0448030:CDS |
| GAAGCGTCGGACCGAATCGG+CGG | 0.639310 | 3_3:-27005663 | Msa0448030:CDS |
| TGAAGACTTTCTCTTCACAT+CGG | 0.644219 | 3_3:-27003702 | Msa0448030:CDS |
| GACCTTGAGAGAAGCTATGG+CGG | 0.651467 | 3_3:-26997414 | Msa0448030:CDS |
| TCCGGCGCCGATGATGATGA+CGG | 0.653886 | 3_3:+27005864 | None:intergenic |
| ATCTTAACAGGTATTGACAC+AGG | 0.654307 | 3_3:-26996048 | Msa0448030:intron |
| TGGTGAGGTTAAGAGGTGAT+GGG | 0.658676 | 3_3:-26995698 | Msa0448030:three_prime_UTR |
| GTATGAGAATCATCATTGCA+TGG | 0.661302 | 3_3:-26995768 | Msa0448030:three_prime_UTR |
| AGTGGAAAGTTAATTCCGAG+TGG | 0.662739 | 3_3:-27004734 | Msa0448030:CDS |
| TCTTCATCTATGCTCACGAG+CGG | 0.668267 | 3_3:-26999507 | Msa0448030:CDS |
| GAAACCTGTTATTCCACCAG+CGG | 0.675023 | 3_3:+26997336 | None:intergenic |
| CTGATTTGAAGGTATCTCTG+CGG | 0.685392 | 3_3:-27005730 | Msa0448030:intron |
| TGATCGTCTCAAACTCAACA+AGG | 0.693245 | 3_3:-27003663 | Msa0448030:intron |
| GGCGCCGATGATGATGACGG+AGG | 0.694860 | 3_3:+27005867 | None:intergenic |
| CCTACACAATTATATCTGAG+TGG | 0.695407 | 3_3:-26995880 | Msa0448030:CDS |
| CAAGTATGTCAATAGCGTCG+GGG | 0.718456 | 3_3:+26997363 | None:intergenic |
| TTTAATGGCTATGTACATGG+CGG | 0.729425 | 3_3:-26996418 | Msa0448030:CDS |
| TGGAATAACAGGTTTCAGCG+CGG | 0.786015 | 3_3:-26997329 | Msa0448030:CDS |
| AACCTGTTATTCCACCAGCG+GGG | 0.800283 | 3_3:+26997338 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTATTTTTATTTTTAAT+AGG | + | chr3_3:27002139-27002158 | None:intergenic | 0.0% |
| !! | AAATAAATAAATAAATATTT+AGG | + | chr3_3:27003323-27003342 | None:intergenic | 0.0% |
| !!! | TTATTTATTTATTTATATTT+TGG | - | chr3_3:27003329-27003348 | Msa0448030:intron | 0.0% |
| !!! | CTTTATTTTATTTGAAAATT+TGG | + | chr3_3:26996581-26996600 | None:intergenic | 10.0% |
| !! | AAAAAAATTTGAGAAAAAAA+CGG | + | chr3_3:26996604-26996623 | None:intergenic | 10.0% |
| !!! | TAAAAATGATTATTTCTTTT+TGG | + | chr3_3:26997275-26997294 | None:intergenic | 10.0% |
| !!! | TTTTGATTACTTTTATTTTA+AGG | - | chr3_3:26998296-26998315 | Msa0448030:intron | 10.0% |
| !!! | AACAATTTACAATTTTTTTT+TGG | - | chr3_3:26998789-26998808 | Msa0448030:intron | 10.0% |
| !!! | AAATTTTATTTTTCTCATTA+GGG | - | chr3_3:27002085-27002104 | Msa0448030:intron | 10.0% |
| !! | TAATAATTAATTCAAAATTG+TGG | - | chr3_3:27002930-27002949 | Msa0448030:intron | 10.0% |
| !! | TTTATAATATTAAGGTAATA+AGG | - | chr3_3:27004189-27004208 | Msa0448030:intron | 10.0% |
| !! | CTAAAAAGAAAATGAAAAAA+TGG | + | chr3_3:26996020-26996039 | None:intergenic | 15.0% |
| !!! | TAAACTTATTTTTTTAGTTG+TGG | + | chr3_3:26996233-26996252 | None:intergenic | 15.0% |
| !!! | TCTGTTTTATGATTTTAAAT+CGG | - | chr3_3:26996325-26996344 | Msa0448030:intron | 15.0% |
| !! | TAAGAAAATAACTTAGTTAT+CGG | + | chr3_3:26996452-26996471 | None:intergenic | 15.0% |
| !! | TAAAAGTAAACATTTCAAAA+AGG | + | chr3_3:26996953-26996972 | None:intergenic | 15.0% |
| !! | CAATATAAAGAAACAAAAAA+AGG | + | chr3_3:26996982-26997001 | None:intergenic | 15.0% |
| !! | AAGTTCAAAATTTGTATTTA+TGG | - | chr3_3:26997436-26997455 | Msa0448030:CDS | 15.0% |
| !! | AGTTCAAAATTTGTATTTAT+GGG | - | chr3_3:26997437-26997456 | Msa0448030:CDS | 15.0% |
| !!! | GATTTTTACTTTGTTAAAAA+AGG | - | chr3_3:26997853-26997872 | Msa0448030:intron | 15.0% |
| !!! | TTTTTTTTTACAAAGCTAAA+TGG | + | chr3_3:26997940-26997959 | None:intergenic | 15.0% |
| !! | TATGTTAACTTAAATTGATT+TGG | - | chr3_3:26998120-26998139 | Msa0448030:intron | 15.0% |
| !! | TATTATTTAATTGAAGAAAG+TGG | + | chr3_3:26998624-26998643 | None:intergenic | 15.0% |
| !! | ACTTTCTTCAATTAAATAAT+AGG | - | chr3_3:26998623-26998642 | Msa0448030:intron | 15.0% |
| !! | TAAAATGAACATATTATGAA+TGG | - | chr3_3:26998860-26998879 | Msa0448030:intron | 15.0% |
| !! | TGTTGTATACAATAAAATAA+TGG | - | chr3_3:26999134-26999153 | Msa0448030:intron | 15.0% |
| !! | AAATATAAGAAAGATGTTAT+AGG | + | chr3_3:26999281-26999300 | None:intergenic | 15.0% |
| !! | TTTCATATAAAATAACAACA+TGG | - | chr3_3:26999761-26999780 | Msa0448030:intron | 15.0% |
| !!! | TTTTTTTTTTTTTTGGACAA+AGG | + | chr3_3:26999967-26999986 | None:intergenic | 15.0% |
| !!! | TTTATTTTCTTAAAACAACT+AGG | - | chr3_3:27000175-27000194 | Msa0448030:intron | 15.0% |
| !!! | TTTTGAATAATGAAGAAAAA+TGG | + | chr3_3:27000231-27000250 | None:intergenic | 15.0% |
| !!! | TGATTTTTGAAATAGAAATA+TGG | - | chr3_3:27001404-27001423 | Msa0448030:intron | 15.0% |
| !! | TCATCAAATTAAACAATTAT+GGG | - | chr3_3:27001653-27001672 | Msa0448030:intron | 15.0% |
| !!! | TTGTTTTAAATTTTCCTTAA+TGG | - | chr3_3:27001996-27002015 | Msa0448030:intron | 15.0% |
| !! | AAAATAAAATTTCTTCAAAC+TGG | + | chr3_3:27002077-27002096 | None:intergenic | 15.0% |
| !!! | GAAATTTTATTTTTCTCATT+AGG | - | chr3_3:27002084-27002103 | Msa0448030:intron | 15.0% |
| !!! | ATGATGAATTTTTAACAATT+TGG | - | chr3_3:27003157-27003176 | Msa0448030:intron | 15.0% |
| !!! | TAAAACCAGTTTTTTATATA+TGG | - | chr3_3:27003250-27003269 | Msa0448030:intron | 15.0% |
| !! | TATTATCAATATAAGACAAA+TGG | + | chr3_3:27003417-27003436 | None:intergenic | 15.0% |
| !! | GATAATATTAATTATTTCCT+AGG | - | chr3_3:27003430-27003449 | Msa0448030:intron | 15.0% |
| !!! | AATTGTTTTCTTATTTCATA+TGG | - | chr3_3:27003595-27003614 | Msa0448030:intron | 15.0% |
| !! | ATTATAAAAAACTTTACGAT+TGG | + | chr3_3:27004177-27004196 | None:intergenic | 15.0% |
| !! | TATTTGATTCATACTATAAT+GGG | + | chr3_3:27004623-27004642 | None:intergenic | 15.0% |
| !! | TTATTTGATTCATACTATAA+TGG | + | chr3_3:27004624-27004643 | None:intergenic | 15.0% |
| !!! | TAGTTTGAAATTTTGATTAT+TGG | + | chr3_3:27004709-27004728 | None:intergenic | 15.0% |
| !!! | ATTGAACTTTTAAAACTAAA+AGG | - | chr3_3:27004905-27004924 | Msa0448030:intron | 15.0% |
| !! | TAAAATGACAAATAACATAA+GGG | + | chr3_3:27004956-27004975 | None:intergenic | 15.0% |
| !! | ATAAAATGACAAATAACATA+AGG | + | chr3_3:27004957-27004976 | None:intergenic | 15.0% |
| !! | ATTCTTCTTTAAATGTTAAA+AGG | + | chr3_3:27005136-27005155 | None:intergenic | 15.0% |
| !! | TAAATTCATATAAATATGTG+AGG | + | chr3_3:27005372-27005391 | None:intergenic | 15.0% |
| !!! | ATGATTTATCGAGTTTTTTT+TGG | - | chr3_3:26996163-26996182 | Msa0448030:intron | 20.0% |
| !!! | ACATAACAAAATCGTTTTAA+CGG | + | chr3_3:26996895-26996914 | None:intergenic | 20.0% |
| !!! | TTTTTTCCTGTTACTATTTT+AGG | - | chr3_3:26997016-26997035 | Msa0448030:intron | 20.0% |
| !! | TTATCTACTCAATCAAATTA+TGG | + | chr3_3:26997369-26997388 | None:intergenic | 20.0% |
| !! | ATAATTTGATTGAGTAGATA+AGG | - | chr3_3:26997368-26997387 | Msa0448030:CDS | 20.0% |
| !! | TAATTTGATTGAGTAGATAA+GGG | - | chr3_3:26997369-26997388 | Msa0448030:CDS | 20.0% |
| !! | AAATCTACATATGTTGATAT+TGG | + | chr3_3:26997669-26997688 | None:intergenic | 20.0% |
| !!! | ATATCAACATATGTAGATTT+TGG | - | chr3_3:26997669-26997688 | Msa0448030:intron | 20.0% |
| !!! | TATCAACATATGTAGATTTT+GGG | - | chr3_3:26997670-26997689 | Msa0448030:intron | 20.0% |
| !! | TAAAAATCTCAATCAAAGAA+AGG | + | chr3_3:26997841-26997860 | None:intergenic | 20.0% |
| !!! | TGTTAAAAAAGGACTTTTTT+TGG | - | chr3_3:26997864-26997883 | Msa0448030:intron | 20.0% |
| !!! | ATTTTTTTTGCTCTCTTTTA+GGG | + | chr3_3:26998949-26998968 | None:intergenic | 20.0% |
| !!! | AATTTTTTTTGCTCTCTTTT+AGG | + | chr3_3:26998950-26998969 | None:intergenic | 20.0% |
| !!! | AATGGTCTAATATTTTAACT+GGG | + | chr3_3:26999001-26999020 | None:intergenic | 20.0% |
| !!! | TAATGGTCTAATATTTTAAC+TGG | + | chr3_3:26999002-26999021 | None:intergenic | 20.0% |
| !! | AGATAGAAGATATTAATTGT+GGG | + | chr3_3:26999628-26999647 | None:intergenic | 20.0% |
| !! | GTATATTCAATGAAATTCAT+TGG | + | chr3_3:26999859-26999878 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTTTGTGTGTCA+GGG | + | chr3_3:27000100-27000119 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTTTTGTGTGTC+AGG | + | chr3_3:27000101-27000120 | None:intergenic | 20.0% |
| !!! | ACTAGTATTATTTTTTTGCA+TGG | - | chr3_3:27000500-27000519 | Msa0448030:intron | 20.0% |
| !! | ATAAATTGACCAATTAAGTT+GGG | + | chr3_3:27001174-27001193 | None:intergenic | 20.0% |
| !! | TATAAATTGACCAATTAAGT+TGG | + | chr3_3:27001175-27001194 | None:intergenic | 20.0% |
| !! | AGCTAATAATCTTGAATATT+TGG | - | chr3_3:27001345-27001364 | Msa0448030:intron | 20.0% |
| !! | TATTTCAAAAATCACAAGTA+TGG | + | chr3_3:27001398-27001417 | None:intergenic | 20.0% |
| !! | GTCATCAAATTAAACAATTA+TGG | - | chr3_3:27001652-27001671 | Msa0448030:intron | 20.0% |
| !!! | TTTCATTATTTTATCCATCA+TGG | + | chr3_3:27001821-27001840 | None:intergenic | 20.0% |
| !! | AACAGAATTAAAATCTCTTA+AGG | - | chr3_3:27002202-27002221 | Msa0448030:intron | 20.0% |
| !!! | AGTGTGATTGAAATTTTATA+TGG | + | chr3_3:27002254-27002273 | None:intergenic | 20.0% |
| !!! | TATTCTATTTTTCTGTTTGA+AGG | + | chr3_3:27002595-27002614 | None:intergenic | 20.0% |
| !! | ACTGATAATTAACTCATATT+TGG | + | chr3_3:27003129-27003148 | None:intergenic | 20.0% |
| !! | AACAAAATATACAAATGCTA+TGG | + | chr3_3:27003190-27003209 | None:intergenic | 20.0% |
| !!! | GTTTTATCAATTTTAGTCTT+CGG | + | chr3_3:27003236-27003255 | None:intergenic | 20.0% |
| !! | AATATAAGACAAATGGTAAT+AGG | + | chr3_3:27003410-27003429 | None:intergenic | 20.0% |
| !! | ATATTAATTATTTCCTAGGA+AGG | - | chr3_3:27003434-27003453 | Msa0448030:intron | 20.0% |
| !! | TGAAATAAGAAAACAATTCA+AGG | + | chr3_3:27003593-27003612 | None:intergenic | 20.0% |
| !!! | ACTATAGTTTGAAATATGTT+AGG | + | chr3_3:27003633-27003652 | None:intergenic | 20.0% |
| !! | AATTGAATTCAGAATCAAAT+AGG | - | chr3_3:27003797-27003816 | Msa0448030:CDS | 20.0% |
| !! | AAGAACAGAAAATATTCAAA+GGG | + | chr3_3:27004256-27004275 | None:intergenic | 20.0% |
| !! | TAAGAACAGAAAATATTCAA+AGG | + | chr3_3:27004257-27004276 | None:intergenic | 20.0% |
| !! | ACCATGTTATATTTAATTCA+GGG | + | chr3_3:27004469-27004488 | None:intergenic | 20.0% |
| !! | AACCATGTTATATTTAATTC+AGG | + | chr3_3:27004470-27004489 | None:intergenic | 20.0% |
| !!! | AAATATAACATGGTTTTGTT+TGG | - | chr3_3:27004475-27004494 | Msa0448030:intron | 20.0% |
| !!! | ACACAATCTTTTTTATTTTG+GGG | + | chr3_3:27004526-27004545 | None:intergenic | 20.0% |
| !!! | CACACAATCTTTTTTATTTT+GGG | + | chr3_3:27004527-27004546 | None:intergenic | 20.0% |
| !!! | TTGATGTTACAATCATTTTA+TGG | - | chr3_3:27004645-27004664 | Msa0448030:CDS | 20.0% |
| !! | TTACGTGTAAATTTGATATT+TGG | - | chr3_3:27004736-27004755 | Msa0448030:intron | 20.0% |
| !!! | TTTAGTAGTTTTAACCTTTT+AGG | - | chr3_3:27004853-27004872 | Msa0448030:intron | 20.0% |
| !!! | TGTCATTTTATATATGTTTC+AGG | - | chr3_3:27004966-27004985 | Msa0448030:intron | 20.0% |
| !!! | TTTCAAGATTGTATTTCTAA+TGG | - | chr3_3:27005080-27005099 | Msa0448030:intron | 20.0% |
| !! | TGTACACAATATTTATTTGA+GGG | + | chr3_3:27005210-27005229 | None:intergenic | 20.0% |
| !! | ATGTACACAATATTTATTTG+AGG | + | chr3_3:27005211-27005230 | None:intergenic | 20.0% |
| !! | TCTTAATGCATTAACAATTA+TGG | + | chr3_3:27005270-27005289 | None:intergenic | 20.0% |
| !! | CATATAGTCATATCATAATA+TGG | + | chr3_3:27005620-27005639 | None:intergenic | 20.0% |
| !! | CATATTATGATATGACTATA+TGG | - | chr3_3:27005618-27005637 | Msa0448030:CDS | 20.0% |
| !! | TCAAAAAAATTTAACCTAGT+TGG | + | chr3_3:27005832-27005851 | None:intergenic | 20.0% |
| !!! | ACTAGGTTAAATTTTTTTGA+AGG | - | chr3_3:27005832-27005851 | Msa0448030:intron | 20.0% |
| !!! | CTAGGTTAAATTTTTTTGAA+GGG | - | chr3_3:27005833-27005852 | Msa0448030:intron | 20.0% |
| !!! | TTTTTTTGAAGGGAATTAAT+TGG | - | chr3_3:27005843-27005862 | Msa0448030:intron | 20.0% |
| !! | ATAAGTAAGATTACAATGTA+AGG | - | chr3_3:27005902-27005921 | Msa0448030:exon | 20.0% |
| !! | TTGTATTTAAGTCTTGTGTT+AGG | - | chr3_3:26996494-26996513 | Msa0448030:intron | 25.0% |
| !! | TGTATTTAAGTCTTGTGTTA+GGG | - | chr3_3:26996495-26996514 | Msa0448030:intron | 25.0% |
| !!! | TGTTGGTGTTTTATATTACA+CGG | - | chr3_3:26996530-26996549 | Msa0448030:intron | 25.0% |
| ! | AAATTTGTCTTACAATAGCT+GGG | + | chr3_3:26997308-26997327 | None:intergenic | 25.0% |
| ! | TAAATTTGTCTTACAATAGC+TGG | + | chr3_3:26997309-26997328 | None:intergenic | 25.0% |
| ! | TATCCAAATCATCATTGAAA+TGG | + | chr3_3:26997399-26997418 | None:intergenic | 25.0% |
| !!! | ATGGGGTTATTTTAAGAAAA+AGG | - | chr3_3:26997488-26997507 | Msa0448030:CDS | 25.0% |
| !!! | TTTTAAGAAAAAGGAAGAAG+TGG | - | chr3_3:26997497-26997516 | Msa0448030:CDS | 25.0% |
| ! | TTTAAGAAAAAGGAAGAAGT+GGG | - | chr3_3:26997498-26997517 | Msa0448030:CDS | 25.0% |
| !!! | TTTTGTCTCTGTTCTAAAAT+TGG | - | chr3_3:26997604-26997623 | Msa0448030:intron | 25.0% |
| !! | ATCAACATATGTAGATTTTG+GGG | - | chr3_3:26997671-26997690 | Msa0448030:intron | 25.0% |
| ! | GAGTTCGATCTAAATTTAAT+GGG | + | chr3_3:26998080-26998099 | None:intergenic | 25.0% |
| ! | TGAGTTCGATCTAAATTTAA+TGG | + | chr3_3:26998081-26998100 | None:intergenic | 25.0% |
| ! | TAAATTTAGATCGAACTCAT+AGG | - | chr3_3:26998082-26998101 | Msa0448030:intron | 25.0% |
| ! | TTAACGAAAACAAATGTATG+GGG | + | chr3_3:26998274-26998293 | None:intergenic | 25.0% |
| ! | CTTAACGAAAACAAATGTAT+GGG | + | chr3_3:26998275-26998294 | None:intergenic | 25.0% |
| ! | ACTTAACGAAAACAAATGTA+TGG | + | chr3_3:26998276-26998295 | None:intergenic | 25.0% |
| !!! | AGTTCTGAATATTTCTCTAT+AGG | + | chr3_3:26998469-26998488 | None:intergenic | 25.0% |
| !!! | TGTTTTTTCATATCTCACAA+AGG | - | chr3_3:26998537-26998556 | Msa0448030:intron | 25.0% |
| !!! | GTTTTTTCATATCTCACAAA+GGG | - | chr3_3:26998538-26998557 | Msa0448030:intron | 25.0% |
| ! | TTTAATTGAAGAAAGTGGTA+TGG | + | chr3_3:26998619-26998638 | None:intergenic | 25.0% |
| ! | AAATAATAGGCAGACTTATT+TGG | - | chr3_3:26998636-26998655 | Msa0448030:intron | 25.0% |
| !!! | ATGGTCTAATATTTTAACTG+GGG | + | chr3_3:26999000-26999019 | None:intergenic | 25.0% |
| ! | TCACTATAAGAACTTCTTAA+TGG | + | chr3_3:26999019-26999038 | None:intergenic | 25.0% |
| ! | AGAAAGATGTTATAGGAATT+AGG | + | chr3_3:26999274-26999293 | None:intergenic | 25.0% |
| ! | CTATCTGTACATATATTCAA+TGG | - | chr3_3:26999541-26999560 | Msa0448030:CDS | 25.0% |
| ! | GAGATAGAAGATATTAATTG+TGG | + | chr3_3:26999629-26999648 | None:intergenic | 25.0% |
| !! | TTCTATCTCAATCCATTTTA+AGG | - | chr3_3:26999640-26999659 | Msa0448030:intron | 25.0% |
| ! | AATTTCCCCATTCATATATT+GGG | - | chr3_3:26999801-26999820 | Msa0448030:intron | 25.0% |
| ! | TTATAAATGTACTCCTCTTT+AGG | + | chr3_3:26999936-26999955 | None:intergenic | 25.0% |
| ! | GGAAAGATTTATTATTACAG+AGG | + | chr3_3:27000301-27000320 | None:intergenic | 25.0% |
| ! | TCTCATGAGATATTATTGTT+TGG | - | chr3_3:27000361-27000380 | Msa0448030:intron | 25.0% |
| ! | ATGAGATATTATTGTTTGGT+TGG | - | chr3_3:27000365-27000384 | Msa0448030:intron | 25.0% |
| ! | TGAGATATTATTGTTTGGTT+GGG | - | chr3_3:27000366-27000385 | Msa0448030:intron | 25.0% |
| !!! | TTTTTTGCATGGAATTATAC+AGG | - | chr3_3:27000511-27000530 | Msa0448030:intron | 25.0% |
| ! | ACCAATAATATTCAAGACTA+GGG | + | chr3_3:27000948-27000967 | None:intergenic | 25.0% |
| ! | AACCAATAATATTCAAGACT+AGG | + | chr3_3:27000949-27000968 | None:intergenic | 25.0% |
| !! | TAGTCTTGAATATTATTGGT+TGG | - | chr3_3:27000948-27000967 | Msa0448030:intron | 25.0% |
| !! | AGTCTTGAATATTATTGGTT+GGG | - | chr3_3:27000949-27000968 | Msa0448030:intron | 25.0% |
| !!! | TTGTATTAAATTTAGCTCTC+TGG | - | chr3_3:27001002-27001021 | Msa0448030:intron | 25.0% |
| !! | TAAATTGACCAATTAAGTTG+GGG | + | chr3_3:27001173-27001192 | None:intergenic | 25.0% |
| ! | GTATAAGTAGCATTATTCTA+AGG | + | chr3_3:27001213-27001232 | None:intergenic | 25.0% |
| ! | TCATGGTTTACATAATTACA+TGG | - | chr3_3:27001509-27001528 | Msa0448030:intron | 25.0% |
| ! | CATGGTTTACATAATTACAT+GGG | - | chr3_3:27001510-27001529 | Msa0448030:intron | 25.0% |
| ! | AATGTACTTGATCAAATGTA+TGG | - | chr3_3:27001611-27001630 | Msa0448030:intron | 25.0% |
| ! | CTAAAACACAAATAAGTTCA+TGG | + | chr3_3:27001712-27001731 | None:intergenic | 25.0% |
| ! | CTATTAATAACATCACTGAA+GGG | + | chr3_3:27001747-27001766 | None:intergenic | 25.0% |
| ! | ACTATTAATAACATCACTGA+AGG | + | chr3_3:27001748-27001767 | None:intergenic | 25.0% |
| ! | TGGATAAAATAATGAAACAG+AGG | - | chr3_3:27001824-27001843 | Msa0448030:intron | 25.0% |
| ! | ATAAAATAATGAAACAGAGG+TGG | - | chr3_3:27001827-27001846 | Msa0448030:intron | 25.0% |
| !! | ATAGATGAAGAATTCCTTTT+CGG | + | chr3_3:27001938-27001957 | None:intergenic | 25.0% |
| !!! | TAATTTTAGGTGAAGTTCTA+TGG | - | chr3_3:27002161-27002180 | Msa0448030:intron | 25.0% |
| !!! | AATTTTAGGTGAAGTTCTAT+GGG | - | chr3_3:27002162-27002181 | Msa0448030:intron | 25.0% |
| ! | AAATCTCTTAAGGATGTATT+TGG | - | chr3_3:27002212-27002231 | Msa0448030:intron | 25.0% |
| !!! | TTTTGTTTGTATACCCTTAT+TGG | - | chr3_3:27002954-27002973 | Msa0448030:intron | 25.0% |
| ! | TTTGTTTGTATACCCTTATT+GGG | - | chr3_3:27002955-27002974 | Msa0448030:intron | 25.0% |
| !! | TTGTATATTTTGTTCTTGTC+CGG | - | chr3_3:27003196-27003215 | Msa0448030:intron | 25.0% |
| !!! | AACCAGTTTTTTATATATGG+AGG | - | chr3_3:27003253-27003272 | Msa0448030:intron | 25.0% |
| ! | TTCCTCCATATATAAAAAAC+TGG | + | chr3_3:27003258-27003277 | None:intergenic | 25.0% |
| ! | GAATTATACAGCAAGAAATT+TGG | - | chr3_3:27003681-27003700 | Msa0448030:CDS | 25.0% |
| ! | GCAATATTATGTTTATGTGT+TGG | + | chr3_3:27003864-27003883 | None:intergenic | 25.0% |
| ! | ACATAATATTGCAATTGTCT+AGG | - | chr3_3:27003872-27003891 | Msa0448030:intron | 25.0% |
| ! | AGAACAGAAAATATTCAAAG+GGG | + | chr3_3:27004255-27004274 | None:intergenic | 25.0% |
| ! | ACAATCACATGCATTTATTT+AGG | - | chr3_3:27004443-27004462 | Msa0448030:intron | 25.0% |
| !!! | CCACACAATCTTTTTTATTT+TGG | + | chr3_3:27004528-27004547 | None:intergenic | 25.0% |
| ! | CCAAAATAAAAAAGATTGTG+TGG | - | chr3_3:27004525-27004544 | Msa0448030:intron | 25.0% |
| ! | ATGCTAAATAAAGGACATTT+AGG | + | chr3_3:27004581-27004600 | None:intergenic | 25.0% |
| ! | CAGTATATCATGCTAAATAA+AGG | + | chr3_3:27004590-27004609 | None:intergenic | 25.0% |
| ! | GGAATTTCAAACATAATAGA+TGG | - | chr3_3:27004757-27004776 | Msa0448030:intron | 25.0% |
| ! | AGGTTAAAACTACTAAAGAA+GGG | + | chr3_3:27004850-27004869 | None:intergenic | 25.0% |
| ! | AAGGTTAAAACTACTAAAGA+AGG | + | chr3_3:27004851-27004870 | None:intergenic | 25.0% |
| ! | CAATTATGGTAAACAAGTAT+TGG | + | chr3_3:27005256-27005275 | None:intergenic | 25.0% |
| ! | TATAAATATGTGAGGTCTTT+GGG | + | chr3_3:27005364-27005383 | None:intergenic | 25.0% |
| ! | ATATAAATATGTGAGGTCTT+TGG | + | chr3_3:27005365-27005384 | None:intergenic | 25.0% |
| ! | ATTACAAGAATCGTAATTGA+TGG | - | chr3_3:27005664-27005683 | Msa0448030:CDS | 25.0% |
| ! | CAAAATACTGAAGTATATGT+TGG | - | chr3_3:27005736-27005755 | Msa0448030:intron | 25.0% |
| ! | CTTGTATTGCAAGTAAAATT+AGG | + | chr3_3:27005951-27005970 | None:intergenic | 25.0% |
| AACTGAGATGTTTCATTTCA+AGG | - | chr3_3:26996198-26996217 | Msa0448030:intron | 30.0% | |
| ATCATGCAGAATGAAATCAA+TGG | + | chr3_3:26997067-26997086 | None:intergenic | 30.0% | |
| !! | CATTCTGCATGATTTTGAAA+TGG | - | chr3_3:26997074-26997093 | Msa0448030:intron | 30.0% |
| ACTCAAAATTAGCTAGCATA+TGG | - | chr3_3:26997218-26997237 | Msa0448030:intron | 30.0% | |
| CAAATCATCATTGAAATGGT+GGG | + | chr3_3:26997395-26997414 | None:intergenic | 30.0% | |
| ATCAGTCAGGAATTGAAAAT+GGG | - | chr3_3:26997470-26997489 | Msa0448030:CDS | 30.0% | |
| ! | AAGAAGTGGGATAACTTTTT+AGG | - | chr3_3:26997511-26997530 | Msa0448030:intron | 30.0% |
| ! | AGAAGTGGGATAACTTTTTA+GGG | - | chr3_3:26997512-26997531 | Msa0448030:intron | 30.0% |
| AATCACAATCACAATCACAA+TGG | + | chr3_3:26997539-26997558 | None:intergenic | 30.0% | |
| TGAAAAACTTTAAGCAGAAG+TGG | - | chr3_3:26997641-26997660 | Msa0448030:intron | 30.0% | |
| !! | CGATTACTTGCTATACAAAA+TGG | - | chr3_3:26997728-26997747 | Msa0448030:intron | 30.0% |
| TACTGACATATAAACAGGTA+GGG | + | chr3_3:26997891-26997910 | None:intergenic | 30.0% | |
| CAAGATGACAAAATAGCAAA+AGG | + | chr3_3:26997993-26998012 | None:intergenic | 30.0% | |
| !! | TTTTCCAAAAGCACATGATT+TGG | + | chr3_3:26998386-26998405 | None:intergenic | 30.0% |
| !! | AAATCATGTGCTTTTGGAAA+AGG | - | chr3_3:26998385-26998404 | Msa0448030:intron | 30.0% |
| !! | AATCATGTGCTTTTGGAAAA+GGG | - | chr3_3:26998386-26998405 | Msa0448030:intron | 30.0% |
| !!! | ATGATTTTTTCCCACATACA+TGG | + | chr3_3:26998708-26998727 | None:intergenic | 30.0% |
| AAGAAACACAAAACAGAGAA+TGG | + | chr3_3:26998900-26998919 | None:intergenic | 30.0% | |
| ! | AAAAGGACAGACTTTTTGAA+CGG | + | chr3_3:26999221-26999240 | None:intergenic | 30.0% |
| ! | CTTTCTTATATTTCTACGTG+AGG | - | chr3_3:26999288-26999307 | Msa0448030:intron | 30.0% |
| TCATTTCAACGTTTGAATAC+TGG | - | chr3_3:26999489-26999508 | Msa0448030:CDS | 30.0% | |
| !! | ATAGGTCCTCTAAAATGTTT+CGG | + | chr3_3:26999587-26999606 | None:intergenic | 30.0% |
| ! | TCAAATTTTGCCTGTACTAT+AGG | + | chr3_3:26999605-26999624 | None:intergenic | 30.0% |
| ATGAGTAAAAGGCCTTAAAA+TGG | + | chr3_3:26999655-26999674 | None:intergenic | 30.0% | |
| !! | CCTACTGATTTATGAGTAAA+AGG | + | chr3_3:26999666-26999685 | None:intergenic | 30.0% |
| ! | CCTTTTACTCATAAATCAGT+AGG | - | chr3_3:26999663-26999682 | Msa0448030:intron | 30.0% |
| GTAACTGAAATTGGAACTTT+GGG | + | chr3_3:26999690-26999709 | None:intergenic | 30.0% | |
| CAATTTCCCCATTCATATAT+TGG | - | chr3_3:26999800-26999819 | Msa0448030:intron | 30.0% | |
| TATGACCCAATATATGAATG+GGG | + | chr3_3:26999809-26999828 | None:intergenic | 30.0% | |
| CTATGACCCAATATATGAAT+GGG | + | chr3_3:26999810-26999829 | None:intergenic | 30.0% | |
| ACTATGACCCAATATATGAA+TGG | + | chr3_3:26999811-26999830 | None:intergenic | 30.0% | |
| ! | GTTTGGAACAAATTATGTGT+TGG | + | chr3_3:26999901-26999920 | None:intergenic | 30.0% |
| AAACTCCAATAAATCTGCAA+AGG | - | chr3_3:27000250-27000269 | Msa0448030:intron | 30.0% | |
| AACTCCAATAAATCTGCAAA+GGG | - | chr3_3:27000251-27000270 | Msa0448030:intron | 30.0% | |
| TTATTATTACAGAGGAACCT+GGG | + | chr3_3:27000293-27000312 | None:intergenic | 30.0% | |
| TTTATTATTACAGAGGAACC+TGG | + | chr3_3:27000294-27000313 | None:intergenic | 30.0% | |
| AAATCTTTCCTTGAATTCAG+TGG | - | chr3_3:27000311-27000330 | Msa0448030:intron | 30.0% | |
| ! | AATTCAGTGGTTGATTTCAA+GGG | - | chr3_3:27000324-27000343 | Msa0448030:intron | 30.0% |
| CAAAAACAATTGCAGTCAAA+TGG | + | chr3_3:27000414-27000433 | None:intergenic | 30.0% | |
| GAATTGCAACATTCAAGAAA+TGG | - | chr3_3:27000542-27000561 | Msa0448030:intron | 30.0% | |
| ! | ACATTCAAGAAATGGTGTTA+CGG | - | chr3_3:27000550-27000569 | Msa0448030:intron | 30.0% |
| AACAGACAGAATCACATAAT+TGG | + | chr3_3:27000606-27000625 | None:intergenic | 30.0% | |
| TATGTATTGAGAAAACGTAC+TGG | + | chr3_3:27000677-27000696 | None:intergenic | 30.0% | |
| ! | CTTCTCCTTTATTTACTCTA+AGG | - | chr3_3:27000699-27000718 | Msa0448030:intron | 30.0% |
| CCACATCATACAATATTCTA+CGG | + | chr3_3:27000750-27000769 | None:intergenic | 30.0% | |
| CGTAGAATATTGTATGATGT+GGG | - | chr3_3:27000748-27000767 | Msa0448030:intron | 30.0% | |
| ATGATGTGGGATACATTTAT+TGG | - | chr3_3:27000761-27000780 | Msa0448030:intron | 30.0% | |
| GGTTCTTTCTGTCTATAATA+CGG | - | chr3_3:27000890-27000909 | Msa0448030:CDS | 30.0% | |
| GTTCTTTCTGTCTATAATAC+GGG | - | chr3_3:27000891-27000910 | Msa0448030:CDS | 30.0% | |
| CAATAATATTCAAGACTAGG+GGG | + | chr3_3:27000946-27000965 | None:intergenic | 30.0% | |
| CCAATAATATTCAAGACTAG+GGG | + | chr3_3:27000947-27000966 | None:intergenic | 30.0% | |
| TTGGGAATGTAAAGAAATGT+AGG | - | chr3_3:27000967-27000986 | Msa0448030:intron | 30.0% | |
| TGGGAATGTAAAGAAATGTA+GGG | - | chr3_3:27000968-27000987 | Msa0448030:intron | 30.0% | |
| CAATCATGTCAACAATTGTA+AGG | + | chr3_3:27001235-27001254 | None:intergenic | 30.0% | |
| !! | AATGAAACTGTGTTACTTAG+CGG | + | chr3_3:27001317-27001336 | None:intergenic | 30.0% |
| TACAATTTCGTCCTTCTTAT+AGG | + | chr3_3:27001451-27001470 | None:intergenic | 30.0% | |
| TATAAGAAGGACGAAATTGT+AGG | - | chr3_3:27001450-27001469 | Msa0448030:intron | 30.0% | |
| ATGAATAACATGCAACAAGT+TGG | + | chr3_3:27001479-27001498 | None:intergenic | 30.0% | |
| TTGTTGCATGTTATTCATCT+AGG | - | chr3_3:27001481-27001500 | Msa0448030:intron | 30.0% | |
| ! | TCTGATTAGTTAAGGTCTAA+AGG | - | chr3_3:27001536-27001555 | Msa0448030:intron | 30.0% |
| ATGGAATTACCAATGATATG+AGG | - | chr3_3:27001630-27001649 | Msa0448030:intron | 30.0% | |
| ! | ATTTGATGACCTCATATCAT+TGG | + | chr3_3:27001642-27001661 | None:intergenic | 30.0% |
| CTGATTCAATAATTCCATGA+TGG | - | chr3_3:27001804-27001823 | Msa0448030:intron | 30.0% | |
| CATTACATCACATTTCTCAA+TGG | + | chr3_3:27001863-27001882 | None:intergenic | 30.0% | |
| CATTGAGAAATGTGATGTAA+TGG | - | chr3_3:27001861-27001880 | Msa0448030:intron | 30.0% | |
| ! | TAGATGAAGAATTCCTTTTC+GGG | + | chr3_3:27001937-27001956 | None:intergenic | 30.0% |
| AAAAGAACTGACAACCATTA+AGG | + | chr3_3:27002013-27002032 | None:intergenic | 30.0% | |
| !!! | TGGTTGTCAGTTCTTTTTTT+AGG | - | chr3_3:27002016-27002035 | Msa0448030:intron | 30.0% |
| ! | ACAGAGAATAACTTAGCTTT+AGG | - | chr3_3:27002110-27002129 | Msa0448030:intron | 30.0% |
| TTAAGATTCGACGTCTTTAT+AGG | + | chr3_3:27002473-27002492 | None:intergenic | 30.0% | |
| TATAAAGACGTCGAATCTTA+AGG | - | chr3_3:27002472-27002491 | Msa0448030:intron | 30.0% | |
| GTATTTAAATCCATAGCATC+AGG | + | chr3_3:27002785-27002804 | None:intergenic | 30.0% | |
| TTGTTTGTATACCCTTATTG+GGG | - | chr3_3:27002956-27002975 | Msa0448030:intron | 30.0% | |
| TCTGTATACCATATGTGAAA+TGG | - | chr3_3:27003031-27003050 | Msa0448030:intron | 30.0% | |
| AGAAACTTCCATTTCACATA+TGG | + | chr3_3:27003042-27003061 | None:intergenic | 30.0% | |
| CAATTTATAATGAGCGCATT+AGG | + | chr3_3:27003079-27003098 | None:intergenic | 30.0% | |
| !! | GTTGTAATTTTGACCTTCTT+AGG | - | chr3_3:27003353-27003372 | Msa0448030:intron | 30.0% |
| ! | ATATCTTTGTTATCCTTCCT+AGG | + | chr3_3:27003450-27003469 | None:intergenic | 30.0% |
| ! | TATTTGCTAACAGTAGTAAG+AGG | + | chr3_3:27003484-27003503 | None:intergenic | 30.0% |
| AATTTACACAGAAAACTCCA+AGG | + | chr3_3:27003553-27003572 | None:intergenic | 30.0% | |
| AGTCAATGCATTATTGCATA+GGG | + | chr3_3:27003744-27003763 | None:intergenic | 30.0% | |
| AAGTCAATGCATTATTGCAT+AGG | + | chr3_3:27003745-27003764 | None:intergenic | 30.0% | |
| !! | ATGCAATAATGCATTGACTT+TGG | - | chr3_3:27003745-27003764 | Msa0448030:CDS | 30.0% |
| ACTTTGGATCTAAACTTATG+TGG | - | chr3_3:27003761-27003780 | Msa0448030:CDS | 30.0% | |
| TCAGAATCAAATAGGAACAT+AGG | - | chr3_3:27003805-27003824 | Msa0448030:intron | 30.0% | |
| AAATCAGCAGATTAGTGATT+TGG | + | chr3_3:27003916-27003935 | None:intergenic | 30.0% | |
| ACTTTACGATTGGAGATAAT+CGG | + | chr3_3:27004167-27004186 | None:intergenic | 30.0% | |
| GCCCTGAATTAAATATAACA+TGG | - | chr3_3:27004465-27004484 | Msa0448030:intron | 30.0% | |
| TAAAAAAGATTGTGTGGTCA+AGG | - | chr3_3:27004531-27004550 | Msa0448030:intron | 30.0% | |
| AAAAGACAGCATAGGAAATT+AGG | + | chr3_3:27004798-27004817 | None:intergenic | 30.0% | |
| ! | TAATTTCCTATGCTGTCTTT+TGG | - | chr3_3:27004797-27004816 | Msa0448030:intron | 30.0% |
| AAGAAGGGGAACAAATTAAA+AGG | + | chr3_3:27004835-27004854 | None:intergenic | 30.0% | |
| GGTTAAAACTACTAAAGAAG+GGG | + | chr3_3:27004849-27004868 | None:intergenic | 30.0% | |
| ATAGCCATTAAATCTTTCAC+TGG | + | chr3_3:27005028-27005047 | None:intergenic | 30.0% | |
| AGATTTAATGGCTATGTACA+TGG | - | chr3_3:27005033-27005052 | Msa0448030:intron | 30.0% | |
| ATTTACTGTCAAAGCATAGA+TGG | - | chr3_3:27005323-27005342 | Msa0448030:intron | 30.0% | |
| ATAAATATGTGAGGTCTTTG+GGG | + | chr3_3:27005363-27005382 | None:intergenic | 30.0% | |
| ACCTGTTAAGATTTCAAGAA+GGG | + | chr3_3:27005398-27005417 | None:intergenic | 30.0% | |
| TACCTGTTAAGATTTCAAGA+AGG | + | chr3_3:27005399-27005418 | None:intergenic | 30.0% | |
| AAGCCTTAGTAGAAGAAATA+AGG | - | chr3_3:27005431-27005450 | Msa0448030:intron | 30.0% | |
| ! | CTTCCTTATTTCTTCTACTA+AGG | + | chr3_3:27005437-27005456 | None:intergenic | 30.0% |
| CTTAGTAGAAGAAATAAGGA+AGG | - | chr3_3:27005435-27005454 | Msa0448030:intron | 30.0% | |
| AATATCGCATTTGTGGATAT+TGG | + | chr3_3:27005554-27005573 | None:intergenic | 30.0% | |
| CATATCATAATATGGCTTCT+GGG | + | chr3_3:27005612-27005631 | None:intergenic | 30.0% | |
| TCATATCATAATATGGCTTC+TGG | + | chr3_3:27005613-27005632 | None:intergenic | 30.0% | |
| AATAGTTGAAAAACGCGTTG+CGG | + | chr3_3:26995667-26995686 | None:intergenic | 35.0% | |
| !! | CTCTCTTTTCTCTGATTTGA+AGG | - | chr3_3:26995713-26995732 | Msa0448030:three_prime_UTR | 35.0% |
| GCTTCAACATCTATGATCAA+AGG | - | chr3_3:26995963-26995982 | Msa0448030:CDS | 35.0% | |
| TTTAAATCGGAAAGTAGCTG+CGG | - | chr3_3:26996338-26996357 | Msa0448030:intron | 35.0% | |
| CACAAATATGTGCCTAATGT+CGG | + | chr3_3:26996391-26996410 | None:intergenic | 35.0% | |
| ! | TTTGTATGATAGTGTCGTGT+TGG | + | chr3_3:26996427-26996446 | None:intergenic | 35.0% |
| AGAGCAACTAAAAACGTGAA+GGG | + | chr3_3:26996647-26996666 | None:intergenic | 35.0% | |
| ! | GTTGCTCTGTTTTGTGATTT+TGG | - | chr3_3:26996659-26996678 | Msa0448030:intron | 35.0% |
| !!! | GCTGAGATTTTTTGTTGTTG+TGG | - | chr3_3:26996685-26996704 | Msa0448030:intron | 35.0% |
| !!! | GAGATTTTTTGTTGTTGTGG+TGG | - | chr3_3:26996688-26996707 | Msa0448030:intron | 35.0% |
| ! | AGCTGACTCATACAAAAAAG+CGG | - | chr3_3:26996749-26996768 | Msa0448030:intron | 35.0% |
| AGAATTTGCACTTACAACGA+CGG | + | chr3_3:26996855-26996874 | None:intergenic | 35.0% | |
| !!! | ATGATTTTGAAATGGCAGGT+AGG | - | chr3_3:26997082-26997101 | Msa0448030:intron | 35.0% |
| ! | TGCTGAAAAGTGATAATGTG+AGG | + | chr3_3:26997154-26997173 | None:intergenic | 35.0% |
| !! | CACATTATCACTTTTCAGCA+TGG | - | chr3_3:26997154-26997173 | Msa0448030:intron | 35.0% |
| !! | TGTTGACTCTCCTATTTCAA+TGG | + | chr3_3:26997252-26997271 | None:intergenic | 35.0% |
| CCAAATCATCATTGAAATGG+TGG | + | chr3_3:26997396-26997415 | None:intergenic | 35.0% | |
| CCACCATTTCAATGATGATT+TGG | - | chr3_3:26997393-26997412 | Msa0448030:CDS | 35.0% | |
| CATCAGTCAGGAATTGAAAA+TGG | - | chr3_3:26997469-26997488 | Msa0448030:CDS | 35.0% | |
| TCAGTCAGGAATTGAAAATG+GGG | - | chr3_3:26997471-26997490 | Msa0448030:CDS | 35.0% | |
| !! | TTTTGGGGAGAGAGAATTTT+TGG | - | chr3_3:26997686-26997705 | Msa0448030:intron | 35.0% |
| TGAAGACTTTCTCTTCACAT+CGG | - | chr3_3:26997752-26997771 | Msa0448030:intron | 35.0% | |
| ACTGACATATAAACAGGTAG+GGG | + | chr3_3:26997890-26997909 | None:intergenic | 35.0% | |
| ! | GTACTGACATATAAACAGGT+AGG | + | chr3_3:26997892-26997911 | None:intergenic | 35.0% |
| TTTATATGTCAGTACCCTGT+TGG | - | chr3_3:26997897-26997916 | Msa0448030:intron | 35.0% | |
| TAGATCGAACTCATAGGATT+TGG | - | chr3_3:26998088-26998107 | Msa0448030:intron | 35.0% | |
| AAGCCATGACAAAAACTTTC+AGG | - | chr3_3:26998443-26998462 | Msa0448030:intron | 35.0% | |
| AGGCAGACTTATTTGGTTAA+AGG | - | chr3_3:26998643-26998662 | Msa0448030:intron | 35.0% | |
| GGCAGACTTATTTGGTTAAA+GGG | - | chr3_3:26998644-26998663 | Msa0448030:intron | 35.0% | |
| TTTCACATGCTTGCAGATTT+GGG | + | chr3_3:26999176-26999195 | None:intergenic | 35.0% | |
| GATGTTATAGGAATTAGGTC+AGG | + | chr3_3:26999269-26999288 | None:intergenic | 35.0% | |
| ! | TCTTATATTTCTACGTGAGG+TGG | - | chr3_3:26999291-26999310 | Msa0448030:intron | 35.0% |
| ! | CTTATATTTCTACGTGAGGT+GGG | - | chr3_3:26999292-26999311 | Msa0448030:intron | 35.0% |
| ! | TTATATTTCTACGTGAGGTG+GGG | - | chr3_3:26999293-26999312 | Msa0448030:intron | 35.0% |
| ! | CAAATGCCGAAACATTTTAG+AGG | - | chr3_3:26999578-26999597 | Msa0448030:CDS | 35.0% |
| !! | TTTTAGAGGACCTATAGTAC+AGG | - | chr3_3:26999592-26999611 | Msa0448030:CDS | 35.0% |
| GGTAACTGAAATTGGAACTT+TGG | + | chr3_3:26999691-26999710 | None:intergenic | 35.0% | |
| ! | TGTGTACTGGTAACTGAAAT+TGG | + | chr3_3:26999699-26999718 | None:intergenic | 35.0% |
| GACATATCACCATAGATCAT+TGG | + | chr3_3:26999740-26999759 | None:intergenic | 35.0% | |
| ! | TTAGGTCTCAAGTTCAAGTT+TGG | + | chr3_3:26999918-26999937 | None:intergenic | 35.0% |
| GAAATCAACCACTGAATTCA+AGG | + | chr3_3:27000322-27000341 | None:intergenic | 35.0% | |
| ! | GAATTCAGTGGTTGATTTCA+AGG | - | chr3_3:27000323-27000342 | Msa0448030:intron | 35.0% |
| AGTAAAATGAACTACGTGAC+AGG | + | chr3_3:27000438-27000457 | None:intergenic | 35.0% | |
| ! | GTCACGTAGTTCATTTTACT+AGG | - | chr3_3:27000438-27000457 | Msa0448030:intron | 35.0% |
| AGTAGAAACTTCTTCATCAC+TGG | - | chr3_3:27000462-27000481 | Msa0448030:intron | 35.0% | |
| TTCTTGAATGTTGCAATTCC+CGG | + | chr3_3:27000541-27000560 | None:intergenic | 35.0% | |
| ! | TTGAGAAAACGTACTGGTAA+GGG | + | chr3_3:27000671-27000690 | None:intergenic | 35.0% |
| ! | ATTGAGAAAACGTACTGGTA+AGG | + | chr3_3:27000672-27000691 | None:intergenic | 35.0% |
| CCGTAGAATATTGTATGATG+TGG | - | chr3_3:27000747-27000766 | Msa0448030:intron | 35.0% | |
| ! | AGATTCCATTTTCACCATGT+TGG | + | chr3_3:27000862-27000881 | None:intergenic | 35.0% |
| ATGGTGAAAATGGAATCTCT+AGG | - | chr3_3:27000864-27000883 | Msa0448030:CDS | 35.0% | |
| !! | CCCCTAGTCTTGAATATTAT+TGG | - | chr3_3:27000944-27000963 | Msa0448030:intron | 35.0% |
| AAAGAAATGTAGGGATAGCT+AGG | - | chr3_3:27000977-27000996 | Msa0448030:intron | 35.0% | |
| TGTCTTCATATGCATAAACC+AGG | - | chr3_3:27001055-27001074 | Msa0448030:intron | 35.0% | |
| GTCTTCATATGCATAAACCA+GGG | - | chr3_3:27001056-27001075 | Msa0448030:intron | 35.0% | |
| TCTTCATATGCATAAACCAG+GGG | - | chr3_3:27001057-27001076 | Msa0448030:intron | 35.0% | |
| AGACATCAACAATGAGACTA+TGG | + | chr3_3:27001109-27001128 | None:intergenic | 35.0% | |
| TATTCATCTAGGCTAAGTCA+TGG | - | chr3_3:27001492-27001511 | Msa0448030:intron | 35.0% | |
| !! | TCTTTCTGAAGTTTCCGTAT+AGG | - | chr3_3:27001896-27001915 | Msa0448030:intron | 35.0% |
| ! | TGAAGTTTCCGTATAGGTTT+TGG | - | chr3_3:27001902-27001921 | Msa0448030:intron | 35.0% |
| !! | TGCAAATGAATGTTTTGGAC+GGG | + | chr3_3:27002291-27002310 | None:intergenic | 35.0% |
| !! | GTGCAAATGAATGTTTTGGA+CGG | + | chr3_3:27002292-27002311 | None:intergenic | 35.0% |
| ! | GACAGTGCAAATGAATGTTT+TGG | + | chr3_3:27002296-27002315 | None:intergenic | 35.0% |
| ! | ACGGTGCAAATGAATGTTTT+GGG | + | chr3_3:27002350-27002369 | None:intergenic | 35.0% |
| ! | ATCTTAAGGCATTAAGTGCA+TGG | - | chr3_3:27002486-27002505 | Msa0448030:intron | 35.0% |
| CTGTTTGAAGGCAAAGTTAT+TGG | + | chr3_3:27002583-27002602 | None:intergenic | 35.0% | |
| AATGTTCAACTTGATCCGTA+AGG | + | chr3_3:27002669-27002688 | None:intergenic | 35.0% | |
| AAACTATTGTCCTGATGCTA+TGG | - | chr3_3:27002772-27002791 | Msa0448030:intron | 35.0% | |
| TTAGTGTTTAGCCCCAATAA+GGG | + | chr3_3:27002970-27002989 | None:intergenic | 35.0% | |
| TTCGGCTATATGAATTGTAC+CGG | + | chr3_3:27003218-27003237 | None:intergenic | 35.0% | |
| ATTATCATGTGTGCCTAAGA+AGG | + | chr3_3:27003369-27003388 | None:intergenic | 35.0% | |
| GTTGCAATGTTGATATTCCT+TGG | - | chr3_3:27003533-27003552 | Msa0448030:intron | 35.0% | |
| ! | TGTATTGGCAAGAATGGAAA+TGG | + | chr3_3:27003717-27003736 | None:intergenic | 35.0% |
| ATTGCATAGGGTTTGTGTAT+TGG | + | chr3_3:27003732-27003751 | None:intergenic | 35.0% | |
| GTGTTGGATGAATAAGCAAA+AGG | + | chr3_3:27003848-27003867 | None:intergenic | 35.0% | |
| ! | ATTTGTTTGTTACCAGCACA+TGG | - | chr3_3:27003932-27003951 | Msa0448030:intron | 35.0% |
| CAATGTCACGACTAAGATAT+TGG | + | chr3_3:27003976-27003995 | None:intergenic | 35.0% | |
| TTAGTCGTGACATTGACAAA+TGG | - | chr3_3:27003981-27004000 | Msa0448030:intron | 35.0% | |
| AACAAGTATGTCAATAGCGT+CGG | + | chr3_3:27004096-27004115 | None:intergenic | 35.0% | |
| ! | TATTTTGTCTTTGCATGCAC+TGG | + | chr3_3:27004318-27004337 | None:intergenic | 35.0% |
| AGTGCATGCAAAGACAAAAT+AGG | - | chr3_3:27004317-27004336 | Msa0448030:intron | 35.0% | |
| AGACAAAATAGGTAATGACC+TGG | - | chr3_3:27004328-27004347 | Msa0448030:intron | 35.0% | |
| TTCCTATTCATCAATGAGCT+GGG | + | chr3_3:27004674-27004693 | None:intergenic | 35.0% | |
| TTTCCTATTCATCAATGAGC+TGG | + | chr3_3:27004675-27004694 | None:intergenic | 35.0% | |
| ! | AATAGATGGTGTTTTGCTTG+TGG | - | chr3_3:27004771-27004790 | Msa0448030:intron | 35.0% |
| !!! | CTATGCTGTCTTTTGGTTTT+CGG | - | chr3_3:27004804-27004823 | Msa0448030:intron | 35.0% |
| CACACCAGTGAAAGATTTAA+TGG | - | chr3_3:27005021-27005040 | Msa0448030:intron | 35.0% | |
| TTTAATGGCTATGTACATGG+CGG | - | chr3_3:27005036-27005055 | Msa0448030:intron | 35.0% | |
| TCCCTTCTTGAAATCTTAAC+AGG | - | chr3_3:27005394-27005413 | Msa0448030:intron | 35.0% | |
| !! | ATCTTAACAGGTATTGACAC+AGG | - | chr3_3:27005406-27005425 | Msa0448030:intron | 35.0% |
| TGAAAGCCAAACTCTATTGT+TGG | - | chr3_3:27005474-27005493 | Msa0448030:intron | 35.0% | |
| AAGGTTCCAACAATAGAGTT+TGG | + | chr3_3:27005483-27005502 | None:intergenic | 35.0% | |
| CCACTCAGATATAATTGTGT+AGG | + | chr3_3:27005577-27005596 | None:intergenic | 35.0% | |
| CCTACACAATTATATCTGAG+TGG | - | chr3_3:27005574-27005593 | Msa0448030:CDS | 35.0% | |
| CGATTCTTGTAATTTCCAAG+AGG | + | chr3_3:27005657-27005676 | None:intergenic | 35.0% | |
| GTATGAGAATCATCATTGCA+TGG | - | chr3_3:27005686-27005705 | Msa0448030:CDS | 35.0% | |
| TACTGAAGTATATGTTGGTG+AGG | - | chr3_3:27005741-27005760 | Msa0448030:intron | 35.0% | |
| ! | TATATGTTGGTGAGGTTAAG+AGG | - | chr3_3:27005749-27005768 | Msa0448030:intron | 35.0% |
| TTAGTTCATTCCACTCCTAA+TGG | - | chr3_3:27005804-27005823 | Msa0448030:intron | 35.0% | |
| CTCTTCTCTCACACATTTCA+TGG | - | chr3_3:26995549-26995568 | Msa0448030:three_prime_UTR | 40.0% | |
| !! | CTGATTTGAAGGTATCTCTG+CGG | - | chr3_3:26995724-26995743 | Msa0448030:three_prime_UTR | 40.0% |
| !! | TATGTCTTCTACGCCGTTTT+CGG | + | chr3_3:26995762-26995781 | None:intergenic | 40.0% |
| CGTAGAAGACATAGTGATTC+TGG | - | chr3_3:26995769-26995788 | Msa0448030:three_prime_UTR | 40.0% | |
| TCGTGAAGCTAATCCTGTTT+GGG | - | chr3_3:26995886-26995905 | Msa0448030:CDS | 40.0% | |
| GGAAACATCTTCCATCAGAA+TGG | + | chr3_3:26996370-26996389 | None:intergenic | 40.0% | |
| TGGAAGATGTTTCCGACATT+AGG | - | chr3_3:26996376-26996395 | Msa0448030:intron | 40.0% | |
| CAGAGCAACTAAAAACGTGA+AGG | + | chr3_3:26996648-26996667 | None:intergenic | 40.0% | |
| AGTGGAAAGTTAATTCCGAG+TGG | - | chr3_3:26996720-26996739 | Msa0448030:intron | 40.0% | |
| GATGATGAAGCCAATGATGA+TGG | - | chr3_3:26996813-26996832 | Msa0448030:intron | 40.0% | |
| ! | TGCTTTGTTGCCATCATCAT+TGG | + | chr3_3:26996826-26996845 | None:intergenic | 40.0% |
| AGGCGTCCTAAAATAGTAAC+AGG | + | chr3_3:26997025-26997044 | None:intergenic | 40.0% | |
| AAATCAATGGCGAGTTCTAC+TGG | + | chr3_3:26997054-26997073 | None:intergenic | 40.0% | |
| !!! | CTGCATGATTTTGAAATGGC+AGG | - | chr3_3:26997078-26997097 | Msa0448030:intron | 40.0% |
| GGTCTCGTTTCCATTGAAAT+AGG | - | chr3_3:26997239-26997258 | Msa0448030:intron | 40.0% | |
| GGGTTTGTAATACATCAGTC+AGG | - | chr3_3:26997457-26997476 | Msa0448030:CDS | 40.0% | |
| !!! | GGAGAGAGAATTTTTGGTTG+CGG | - | chr3_3:26997692-26997711 | Msa0448030:intron | 40.0% |
| !!! | TTTTTGGTTGCGGATGAAAG+AGG | - | chr3_3:26997702-26997721 | Msa0448030:intron | 40.0% |
| !! | TTTTGGTTGCGGATGAAAGA+GGG | - | chr3_3:26997703-26997722 | Msa0448030:intron | 40.0% |
| TGATCGTCTCAAACTCAACA+AGG | - | chr3_3:26997791-26997810 | Msa0448030:intron | 40.0% | |
| !! | CAGGGTACTGACATATAAAC+AGG | + | chr3_3:26997896-26997915 | None:intergenic | 40.0% |
| ! | CATCTTGTTTCACTGTCTGT+TGG | - | chr3_3:26998006-26998025 | Msa0448030:intron | 40.0% |
| ! | ACCTCCAAATCATGTGCTTT+TGG | - | chr3_3:26998379-26998398 | Msa0448030:intron | 40.0% |
| ! | TCCAAAAGCACATGATTTGG+AGG | + | chr3_3:26998383-26998402 | None:intergenic | 40.0% |
| ! | AGGCCTGAAAGTTTTTGTCA+TGG | + | chr3_3:26998449-26998468 | None:intergenic | 40.0% |
| TTCACATGCTTGCAGATTTG+GGG | + | chr3_3:26999175-26999194 | None:intergenic | 40.0% | |
| GTTTCACATGCTTGCAGATT+TGG | + | chr3_3:26999177-26999196 | None:intergenic | 40.0% | |
| ! | TATATTTCTACGTGAGGTGG+GGG | - | chr3_3:26999294-26999313 | Msa0448030:intron | 40.0% |
| ACGTTTGAATACTGGTAAGC+AGG | - | chr3_3:26999497-26999516 | Msa0448030:CDS | 40.0% | |
| CGTCAATTCAAACTGTGTAC+TGG | + | chr3_3:26999712-26999731 | None:intergenic | 40.0% | |
| GACGCAATTCCAATGATCTA+TGG | - | chr3_3:26999728-26999747 | Msa0448030:intron | 40.0% | |
| CTTGAACTTGAGACCTAAAG+AGG | - | chr3_3:26999920-26999939 | Msa0448030:intron | 40.0% | |
| ACGACCCTTTGCAGATTTAT+TGG | + | chr3_3:27000258-27000277 | None:intergenic | 40.0% | |
| ATGGAATTATACAGGTCGTC+CGG | - | chr3_3:27000519-27000538 | Msa0448030:intron | 40.0% | |
| !! | AAATGGTGTTACGGTGATCA+CGG | - | chr3_3:27000559-27000578 | Msa0448030:intron | 40.0% |
| GTGATTCTGTCTGTTAGCAT+TGG | - | chr3_3:27000611-27000630 | Msa0448030:intron | 40.0% | |
| GGGCTCCTTAGAGTAAATAA+AGG | + | chr3_3:27000707-27000726 | None:intergenic | 40.0% | |
| TGGGATACATTTATTGGTCC+CGG | - | chr3_3:27000767-27000786 | Msa0448030:intron | 40.0% | |
| TTGAGAACTTGTCACCAACA+TGG | - | chr3_3:27000845-27000864 | Msa0448030:CDS | 40.0% | |
| TGTCACCAACATGGTGAAAA+TGG | - | chr3_3:27000854-27000873 | Msa0448030:CDS | 40.0% | |
| GAAAATGGAATCTCTAGGTG+TGG | - | chr3_3:27000869-27000888 | Msa0448030:CDS | 40.0% | |
| AAAGGGAAATTCCTGCTGTA+GGG | + | chr3_3:27000918-27000937 | None:intergenic | 40.0% | |
| AAAAGGGAAATTCCTGCTGT+AGG | + | chr3_3:27000919-27000938 | None:intergenic | 40.0% | |
| TTGATGTCTATTAGCCCTCT+TGG | - | chr3_3:27001120-27001139 | Msa0448030:intron | 40.0% | |
| TGTCTGTGTGTCCTATAAGA+AGG | - | chr3_3:27001437-27001456 | Msa0448030:intron | 40.0% | |
| ! | ATGGGCACTCTGATTAGTTA+AGG | - | chr3_3:27001528-27001547 | Msa0448030:intron | 40.0% |
| CGGAAACTTCAGAAAGATCT+TGG | + | chr3_3:27001893-27001912 | None:intergenic | 40.0% | |
| ! | GGAGAGGCTATTACACATTT+TGG | - | chr3_3:27001968-27001987 | Msa0448030:intron | 40.0% |
| !! | AGGCTATTACACATTTTGGC+AGG | - | chr3_3:27001972-27001991 | Msa0448030:intron | 40.0% |
| !! | CAAATGAATGTTTTGGACGG+GGG | + | chr3_3:27002289-27002308 | None:intergenic | 40.0% |
| !! | GCAAATGAATGTTTTGGACG+GGG | + | chr3_3:27002290-27002309 | None:intergenic | 40.0% |
| !! | TGCAAATGAATGTTTTGGGC+GGG | + | chr3_3:27002346-27002365 | None:intergenic | 40.0% |
| !! | GTGCAAATGAATGTTTTGGG+CGG | + | chr3_3:27002347-27002366 | None:intergenic | 40.0% |
| ! | GACGGTGCAAATGAATGTTT+TGG | + | chr3_3:27002351-27002370 | None:intergenic | 40.0% |
| ATTGAGTCATAATACGACCC+TGG | - | chr3_3:27002422-27002441 | Msa0448030:intron | 40.0% | |
| TTGAGTCATAATACGACCCT+GGG | - | chr3_3:27002423-27002442 | Msa0448030:intron | 40.0% | |
| ! | GTCAATTTTGCTTCTCGTCA+TGG | - | chr3_3:27002625-27002644 | Msa0448030:intron | 40.0% |
| TCAACTTGATCCGTAAGGTT+AGG | + | chr3_3:27002664-27002683 | None:intergenic | 40.0% | |
| GCTTCATCTTAATCTTCTGC+TGG | - | chr3_3:27002845-27002864 | Msa0448030:intron | 40.0% | |
| TCTGCTGGCAATAGAATTTG+CGG | - | chr3_3:27002860-27002879 | Msa0448030:intron | 40.0% | |
| CTTAGTGTTTAGCCCCAATA+AGG | + | chr3_3:27002971-27002990 | None:intergenic | 40.0% | |
| CTTATTGGGGCTAAACACTA+AGG | - | chr3_3:27002969-27002988 | Msa0448030:intron | 40.0% | |
| !! | TACAGCAAGAAATTTGGTGC+AGG | - | chr3_3:27003687-27003706 | Msa0448030:CDS | 40.0% |
| ! | GGTTTGTGTATTGGCAAGAA+TGG | + | chr3_3:27003723-27003742 | None:intergenic | 40.0% |
| TAAGATATTGGAGCCAGGAT+AGG | + | chr3_3:27003964-27003983 | None:intergenic | 40.0% | |
| AAATGGAGAATCAAAACGCG+TGG | - | chr3_3:27003998-27004017 | Msa0448030:intron | 40.0% | |
| TTCTCTCAAGGTCTCTTCAT+CGG | + | chr3_3:27004033-27004052 | None:intergenic | 40.0% | |
| ACAAGTATGTCAATAGCGTC+GGG | + | chr3_3:27004095-27004114 | None:intergenic | 40.0% | |
| TCCTATTCATCAATGAGCTG+GGG | + | chr3_3:27004673-27004692 | None:intergenic | 40.0% | |
| CGAAAACCAAAAGACAGCAT+AGG | + | chr3_3:27004806-27004825 | None:intergenic | 40.0% | |
| !!! | CTGTCTTTTGGTTTTCGGTT+AGG | - | chr3_3:27004809-27004828 | Msa0448030:intron | 40.0% |
| CAGACTCACATAAGCCTAAA+AGG | + | chr3_3:27004870-27004889 | None:intergenic | 40.0% | |
| TATATGTTTCAGGCTCCTGT+CGG | - | chr3_3:27004976-27004995 | Msa0448030:intron | 40.0% | |
| TGGATATTGGAGACTGTTTC+TGG | + | chr3_3:27005541-27005560 | None:intergenic | 40.0% | |
| GTGTAGGAATATCGCATTTG+TGG | + | chr3_3:27005561-27005580 | None:intergenic | 40.0% | |
| TTATATCTGAGTGGCAAGCT+TGG | - | chr3_3:27005583-27005602 | Msa0448030:CDS | 40.0% | |
| ! | TTAACCTAGTTGGCTCCATT+AGG | + | chr3_3:27005822-27005841 | None:intergenic | 40.0% |
| TTGTGAAGTGGAGATGCGAA+TGG | + | chr3_3:26995641-26995660 | None:intergenic | 45.0% | |
| !! | GCGAAAGTGTTAGCCGAAAA+CGG | - | chr3_3:26995746-26995765 | Msa0448030:three_prime_UTR | 45.0% |
| ! | CATAGTGATTCTGGAAGCGT+CGG | - | chr3_3:26995778-26995797 | Msa0448030:three_prime_UTR | 45.0% |
| AGGATCCGGAAGGAATGTTT+CGG | - | chr3_3:26995815-26995834 | Msa0448030:three_prime_UTR | 45.0% | |
| GTCGTGAAGCTAATCCTGTT+TGG | - | chr3_3:26995885-26995904 | Msa0448030:CDS | 45.0% | |
| CTCAGTGCTGTATTCGCTTA+CGG | - | chr3_3:26996099-26996118 | Msa0448030:intron | 45.0% | |
| GCTGTATTCGCTTACGGTTA+CGG | - | chr3_3:26996105-26996124 | Msa0448030:intron | 45.0% | |
| ACGACGTCGTTTCAGCTAAA+AGG | + | chr3_3:26996293-26996312 | None:intergenic | 45.0% | |
| TTAGCTGAAACGACGTCGTT+TGG | - | chr3_3:26996294-26996313 | Msa0448030:intron | 45.0% | |
| ! | TGATAGTGTCGTGTTGGTGT+CGG | + | chr3_3:26996421-26996440 | None:intergenic | 45.0% |
| TTGTGGTGGTTGCATTGTAG+TGG | - | chr3_3:26996702-26996721 | Msa0448030:intron | 45.0% | |
| GACTTTCTCTTCACATCGGA+AGG | - | chr3_3:26997756-26997775 | Msa0448030:intron | 45.0% | |
| CACATCGGAAGGTAGAATCT+TGG | - | chr3_3:26997767-26997786 | Msa0448030:intron | 45.0% | |
| AGCAAACAGACAAGCCAACA+GGG | + | chr3_3:26997914-26997933 | None:intergenic | 45.0% | |
| AAGCAAACAGACAAGCCAAC+AGG | + | chr3_3:26997915-26997934 | None:intergenic | 45.0% | |
| ATGATCAGCTGCCATGTATG+TGG | - | chr3_3:26998694-26998713 | Msa0448030:intron | 45.0% | |
| TGATCAGCTGCCATGTATGT+GGG | - | chr3_3:26998695-26998714 | Msa0448030:intron | 45.0% | |
| ! | ATATTTCTACGTGAGGTGGG+GGG | - | chr3_3:26999295-26999314 | Msa0448030:intron | 45.0% |
| TAAGCCTTGAGAGCAACTCA+TGG | - | chr3_3:26999992-27000011 | Msa0448030:intron | 45.0% | |
| AAGCCTTGAGAGCAACTCAT+GGG | - | chr3_3:26999993-27000012 | Msa0448030:intron | 45.0% | |
| AAACCCATGAGTTGCTCTCA+AGG | + | chr3_3:26999999-27000018 | None:intergenic | 45.0% | |
| TTATTACAGAGGAACCTGGG+TGG | + | chr3_3:27000290-27000309 | None:intergenic | 45.0% | |
| TGGAATTATACAGGTCGTCC+GGG | - | chr3_3:27000520-27000539 | Msa0448030:intron | 45.0% | |
| TGAAGGCAAGTAGGTCACTT+TGG | + | chr3_3:27000643-27000662 | None:intergenic | 45.0% | |
| !! | TACTGGTAAGGGTGGATTGA+AGG | + | chr3_3:27000660-27000679 | None:intergenic | 45.0% |
| ! | AGAAAACGTACTGGTAAGGG+TGG | + | chr3_3:27000668-27000687 | None:intergenic | 45.0% |
| !! | CTAGCTTGCTTGATTACACG+GGG | + | chr3_3:27000727-27000746 | None:intergenic | 45.0% |
| !! | GCTAGCTTGCTTGATTACAC+GGG | + | chr3_3:27000728-27000747 | None:intergenic | 45.0% |
| !! | GGCTAGCTTGCTTGATTACA+CGG | + | chr3_3:27000729-27000748 | None:intergenic | 45.0% |
| ! | CAGCAGGAATTTCCCTTTTG+TGG | - | chr3_3:27000920-27000939 | Msa0448030:CDS | 45.0% |
| CGCTAGAAAGTAGAGTTTCG+AGG | - | chr3_3:27001032-27001051 | Msa0448030:intron | 45.0% | |
| CATATGCATAAACCAGGGGA+TGG | - | chr3_3:27001061-27001080 | Msa0448030:intron | 45.0% | |
| ACTATGGATCACTGATACCG+TGG | + | chr3_3:27001093-27001112 | None:intergenic | 45.0% | |
| GTCTATTAGCCCTCTTGGTT+AGG | - | chr3_3:27001125-27001144 | Msa0448030:intron | 45.0% | |
| ACGTGTCAACCTAACCAAGA+GGG | + | chr3_3:27001137-27001156 | None:intergenic | 45.0% | |
| GAAGAGGACCCCAACTTAAT+TGG | - | chr3_3:27001162-27001181 | Msa0448030:intron | 45.0% | |
| CTTATAGGACACACAGACAG+TGG | + | chr3_3:27001436-27001455 | None:intergenic | 45.0% | |
| CCACATGGCCAAAACCTATA+CGG | + | chr3_3:27001913-27001932 | None:intergenic | 45.0% | |
| !!! | AATTCCTTTTCGGGTCCACA+TGG | + | chr3_3:27001928-27001947 | None:intergenic | 45.0% |
| TCTTCATCTATGCTCACGAG+CGG | - | chr3_3:27001947-27001966 | Msa0448030:intron | 45.0% | |
| !! | CAAATGAATGTTTTGGGCGG+GGG | + | chr3_3:27002344-27002363 | None:intergenic | 45.0% |
| !! | GCAAATGAATGTTTTGGGCG+GGG | + | chr3_3:27002345-27002364 | None:intergenic | 45.0% |
| TGAGTCATAATACGACCCTG+GGG | - | chr3_3:27002424-27002443 | Msa0448030:intron | 45.0% | |
| GTTAAACGAGATGATCCCCA+GGG | + | chr3_3:27002442-27002461 | None:intergenic | 45.0% | |
| AGTTAAACGAGATGATCCCC+AGG | + | chr3_3:27002443-27002462 | None:intergenic | 45.0% | |
| TGAAACGTCTAACGCACACT+TGG | - | chr3_3:27002553-27002572 | Msa0448030:intron | 45.0% | |
| ! | TTGCCGCTTACCTAACCTTA+CGG | - | chr3_3:27002651-27002670 | Msa0448030:intron | 45.0% |
| GATCCGTAAGGTTAGGTAAG+CGG | + | chr3_3:27002657-27002676 | None:intergenic | 45.0% | |
| CAGCTTGCATAAATCAGGGA+GGG | + | chr3_3:27003299-27003318 | None:intergenic | 45.0% | |
| AGGCCAGCTTGCATAAATCA+GGG | + | chr3_3:27003303-27003322 | None:intergenic | 45.0% | |
| TAGGCCAGCTTGCATAAATC+AGG | + | chr3_3:27003304-27003323 | None:intergenic | 45.0% | |
| GGTAATAGGTGTAGCTGATC+AGG | + | chr3_3:27003396-27003415 | None:intergenic | 45.0% | |
| GATAGGCATTATCCATGTGC+TGG | + | chr3_3:27003947-27003966 | None:intergenic | 45.0% | |
| CACATGGATAATGCCTATCC+TGG | - | chr3_3:27003948-27003967 | Msa0448030:intron | 45.0% | |
| ACGACTAAGATATTGGAGCC+AGG | + | chr3_3:27003969-27003988 | None:intergenic | 45.0% | |
| AGAGACCTTGAGAGAAGCTA+TGG | - | chr3_3:27004037-27004056 | Msa0448030:intron | 45.0% | |
| CAAGTATGTCAATAGCGTCG+GGG | + | chr3_3:27004094-27004113 | None:intergenic | 45.0% | |
| AAACCTGTTATTCCACCAGC+GGG | + | chr3_3:27004120-27004139 | None:intergenic | 45.0% | |
| GAAACCTGTTATTCCACCAG+CGG | + | chr3_3:27004121-27004140 | None:intergenic | 45.0% | |
| TGGAATAACAGGTTTCAGCG+CGG | - | chr3_3:27004125-27004144 | Msa0448030:intron | 45.0% | |
| !! | GAACCTTTGCTAGCATTGAC+AGG | - | chr3_3:27005496-27005515 | Msa0448030:CDS | 45.0% |
| GATCCTGTCAATGCTAGCAA+AGG | + | chr3_3:27005502-27005521 | None:intergenic | 45.0% | |
| GGAGTTGTAGAGAATCCTCT+TGG | - | chr3_3:27005639-27005658 | Msa0448030:CDS | 45.0% | |
| CATCATTGCATGGTGAGTCA+TGG | - | chr3_3:27005696-27005715 | Msa0448030:CDS | 45.0% | |
| TTGGTGAGGTTAAGAGGTGA+TGG | - | chr3_3:27005755-27005774 | Msa0448030:intron | 45.0% | |
| TGGTGAGGTTAAGAGGTGAT+GGG | - | chr3_3:27005756-27005775 | Msa0448030:intron | 45.0% | |
| !! | TATCAAAAATAAAATAAAAA+AGG | + | chr3_3:26999238-26999257 | None:intergenic | 5.0% |
| !!! | TAAAACTTTTTTTTTTTTTT+TGG | + | chr3_3:26999974-26999993 | None:intergenic | 5.0% |
| !!! | ATTTTAACTAAATAAATTAA+AGG | + | chr3_3:27000146-27000165 | None:intergenic | 5.0% |
| !!! | AAAAATAAAAACTTAATTTT+AGG | - | chr3_3:27002148-27002167 | Msa0448030:intron | 5.0% |
| !! | AGTATAATATTATTATAAAT+TGG | - | chr3_3:27003650-27003669 | Msa0448030:intron | 5.0% |
| !!! | TAAAGTTTTTTATAATATTA+AGG | - | chr3_3:27004181-27004200 | Msa0448030:intron | 5.0% |
| AAGTGGAGATGCGAATGGTG+TGG | + | chr3_3:26995636-26995655 | None:intergenic | 50.0% | |
| AGTTGAAAAACGCGTTGCGG+TGG | + | chr3_3:26995664-26995683 | None:intergenic | 50.0% | |
| ATCCGGAAGGAATGTTTCGG+TGG | - | chr3_3:26995818-26995837 | Msa0448030:three_prime_UTR | 50.0% | |
| TGAACAGCGAGTTCCCAAAC+AGG | + | chr3_3:26995902-26995921 | None:intergenic | 50.0% | |
| TAGGGTGTGCGTGTATGTGT+TGG | - | chr3_3:26996513-26996532 | Msa0448030:intron | 50.0% | |
| GTTACGGTGATCACGGAAGA+TGG | - | chr3_3:27000566-27000585 | Msa0448030:intron | 50.0% | |
| !! | AGGGTGGATTGAAGGCAAGT+AGG | + | chr3_3:27000652-27000671 | None:intergenic | 50.0% |
| ! | ATATCAGCGTGAGAAGCACG+AGG | + | chr3_3:27000804-27000823 | None:intergenic | 50.0% |
| ATAATACGGGTCCCTACAGC+AGG | - | chr3_3:27000904-27000923 | Msa0448030:CDS | 50.0% | |
| AAGACTAGGGGGCCACAAAA+GGG | + | chr3_3:27000935-27000954 | None:intergenic | 50.0% | |
| CACGTGTCAACCTAACCAAG+AGG | + | chr3_3:27001138-27001157 | None:intergenic | 50.0% | |
| !! | CTCTTGGTTAGGTTGACACG+TGG | - | chr3_3:27001136-27001155 | Msa0448030:intron | 50.0% |
| GGACACACAGACAGTGGTTT+AGG | + | chr3_3:27001430-27001449 | None:intergenic | 50.0% | |
| !! | CCGTATAGGTTTTGGCCATG+TGG | - | chr3_3:27001910-27001929 | Msa0448030:intron | 50.0% |
| CACTGTCGTCGATACTCACT+CGG | - | chr3_3:27002309-27002328 | Msa0448030:intron | 50.0% | |
| CCAGCTTGCATAAATCAGGG+AGG | + | chr3_3:27003300-27003319 | None:intergenic | 50.0% | |
| CCTCCCTGATTTATGCAAGC+TGG | - | chr3_3:27003297-27003316 | Msa0448030:intron | 50.0% | |
| GACCTTGAGAGAAGCTATGG+CGG | - | chr3_3:27004040-27004059 | Msa0448030:intron | 50.0% | |
| ! | TCAATAGCGTCGGGGATGTT+GGG | + | chr3_3:27004086-27004105 | None:intergenic | 50.0% |
| TTGACATACTTGTTCCCCGC+TGG | - | chr3_3:27004102-27004121 | Msa0448030:intron | 50.0% | |
| AACCTGTTATTCCACCAGCG+GGG | + | chr3_3:27004119-27004138 | None:intergenic | 50.0% | |
| AGTAGCAAGCTGTAAGCTCC+AGG | + | chr3_3:27004349-27004368 | None:intergenic | 50.0% | |
| GCCCCAGCTCATTGATGAAT+AGG | - | chr3_3:27004669-27004688 | Msa0448030:CDS | 50.0% | |
| GTGAAGAAAATGCGACCGAC+AGG | + | chr3_3:27004994-27005013 | None:intergenic | 50.0% | |
| ! | GTCGGTCGCATTTTCTTCAC+CGG | - | chr3_3:27004994-27005013 | Msa0448030:intron | 50.0% |
| TCTTTCACTGGTGTGCTCTC+CGG | + | chr3_3:27005016-27005035 | None:intergenic | 50.0% | |
| !! | GTACATGGCGGATATCTTGC+AGG | - | chr3_3:27005048-27005067 | Msa0448030:intron | 50.0% |
| ! | CTAGTTGGCTCCATTAGGAG+TGG | + | chr3_3:27005817-27005836 | None:intergenic | 50.0% |
| CACTCCTAATGGAGCCAACT+AGG | - | chr3_3:27005815-27005834 | Msa0448030:intron | 50.0% | |
| !! | GATGACGGAGGAGCGATTAG+TGG | + | chr3_3:26995578-26995597 | None:intergenic | 55.0% |
| CGCTCCTCCGTCATCATCAT+CGG | - | chr3_3:26995583-26995602 | Msa0448030:three_prime_UTR | 55.0% | |
| GCGGAAGTTACCGGAGATTC+CGG | + | chr3_3:26995611-26995630 | None:intergenic | 55.0% | |
| AGATGCGAATGGTGTGGTGG+CGG | + | chr3_3:26995630-26995649 | None:intergenic | 55.0% | |
| TGGAGATGCGAATGGTGTGG+TGG | + | chr3_3:26995633-26995652 | None:intergenic | 55.0% | |
| CGCCACCGAAACATTCCTTC+CGG | + | chr3_3:26995823-26995842 | None:intergenic | 55.0% | |
| GGAATGTTTCGGTGGCGTGT+CGG | - | chr3_3:26995826-26995845 | Msa0448030:three_prime_UTR | 55.0% | |
| TCCAACACCAGCGATCCAAC+CGG | + | chr3_3:26995864-26995883 | None:intergenic | 55.0% | |
| !! | TGCGGCACTGACCATTCTGA+TGG | - | chr3_3:26996356-26996375 | Msa0448030:intron | 55.0% |
| GAGTCAGCTGCGATTCCACT+CGG | + | chr3_3:26996738-26996757 | None:intergenic | 55.0% | |
| GCGAGTTCTACTGGCGTCTT+AGG | + | chr3_3:26997045-26997064 | None:intergenic | 55.0% | |
| CAAGACTAGGGGGCCACAAA+AGG | + | chr3_3:27000936-27000955 | None:intergenic | 55.0% | |
| GGTTGACACGTGGACAGAAG+AGG | - | chr3_3:27001146-27001165 | Msa0448030:intron | 55.0% | |
| TTGGCCATGTGGACCCGAAA+AGG | - | chr3_3:27001921-27001940 | Msa0448030:intron | 55.0% | |
| ATCTATGCTCACGAGCGGAG+AGG | - | chr3_3:27001952-27001971 | Msa0448030:intron | 55.0% | |
| !! | ATGTTTTGGACGGGGGAGAG+AGG | + | chr3_3:27002282-27002301 | None:intergenic | 55.0% |
| CACCGTCGTCGATACTCACT+CGG | - | chr3_3:27002364-27002383 | Msa0448030:intron | 55.0% | |
| !! | GACCGAGTGAGTATCGACGA+CGG | + | chr3_3:27002314-27002333 | None:intergenic | 55.0% |
| CACCGCCATAGCTTCTCTCA+AGG | + | chr3_3:27004045-27004064 | None:intergenic | 55.0% | |
| AGAAGCTATGGCGGTGCTCA+GGG | - | chr3_3:27004049-27004068 | Msa0448030:intron | 55.0% | |
| GCGGTGCTCAGGGATATGTT+TGG | - | chr3_3:27004059-27004078 | Msa0448030:intron | 55.0% | |
| ! | GTCAATAGCGTCGGGGATGT+TGG | + | chr3_3:27004087-27004106 | None:intergenic | 55.0% |
| ACATACTTGTTCCCCGCTGG+TGG | - | chr3_3:27004105-27004124 | Msa0448030:intron | 55.0% | |
| TTCCCCGCTGGTGGAATAAC+AGG | - | chr3_3:27004114-27004133 | Msa0448030:intron | 55.0% | |
| TCCGTCATCATCATCGGCGC+CGG | - | chr3_3:26995589-26995608 | Msa0448030:three_prime_UTR | 60.0% | |
| !! | TCCGGCGCCGATGATGATGA+CGG | + | chr3_3:26995593-26995612 | None:intergenic | 60.0% |
| ! | ATCATCGGCGCCGGAATCTC+CGG | - | chr3_3:26995598-26995617 | Msa0448030:three_prime_UTR | 60.0% |
| !! | GGTGTGGTGGCGGAAGTTAC+CGG | + | chr3_3:26995620-26995639 | None:intergenic | 60.0% |
| GCGTTGCGGTGGTTGTGAAG+TGG | + | chr3_3:26995653-26995672 | None:intergenic | 60.0% | |
| !! | CTGGAAGCGTCGGACCGAAT+CGG | - | chr3_3:26995788-26995807 | Msa0448030:three_prime_UTR | 60.0% |
| ATGTTTCGGTGGCGTGTCGG+TGG | - | chr3_3:26995829-26995848 | Msa0448030:three_prime_UTR | 60.0% | |
| ! | GGTTGGATCGCTGGTGTTGG+AGG | - | chr3_3:26995863-26995882 | Msa0448030:CDS | 60.0% |
| GTCGTACTCGAAGTCCACCC+AGG | - | chr3_3:27000273-27000292 | Msa0448030:intron | 60.0% | |
| ! | TCAGCGTGAGAAGCACGAGG+TGG | + | chr3_3:27000801-27000820 | None:intergenic | 60.0% |
| CCAGGGGATGGCATGATCCA+CGG | - | chr3_3:27001073-27001092 | Msa0448030:intron | 60.0% | |
| GAGAAGCTATGGCGGTGCTC+AGG | - | chr3_3:27004048-27004067 | Msa0448030:intron | 60.0% | |
| !! | GGCGCCGATGATGATGACGG+AGG | + | chr3_3:26995590-26995609 | None:intergenic | 65.0% |
| !! | GAAGCGTCGGACCGAATCGG+CGG | - | chr3_3:26995791-26995810 | Msa0448030:three_prime_UTR | 65.0% |
| ACCGAATCGGCGGCAGGATC+CGG | - | chr3_3:26995801-26995820 | Msa0448030:three_prime_UTR | 65.0% | |
| ! | TCCGGATCCTGCCGCCGATT+CGG | + | chr3_3:26995805-26995824 | None:intergenic | 65.0% |
| AATCGGCGGCAGGATCCGGA+AGG | - | chr3_3:26995805-26995824 | Msa0448030:three_prime_UTR | 65.0% | |
| ! | GGTGGCGTGTCGGTGGAACT+CGG | - | chr3_3:26995836-26995855 | Msa0448030:exon | 65.0% |
| !! | GTGTCGGTGGAACTCGGTGC+CGG | - | chr3_3:26995842-26995861 | Msa0448030:exon | 65.0% |
| GCCGGTTGGATCGCTGGTGT+TGG | - | chr3_3:26995860-26995879 | Msa0448030:CDS | 65.0% | |
| CCGTGGATCATGCCATCCCC+TGG | + | chr3_3:27001076-27001095 | None:intergenic | 65.0% | |
| !! | CGGTGGAACTCGGTGCCGGT+TGG | - | chr3_3:26995846-26995865 | Msa0448030:exon | 70.0% |
| !! | CTCGGTGCCGGTTGGATCGC+TGG | - | chr3_3:26995854-26995873 | Msa0448030:CDS | 70.0% |
| CGTCGGACCGAATCGGCGGC+AGG | - | chr3_3:26995795-26995814 | Msa0448030:three_prime_UTR | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 26995491 | 27005985 | 26995491 | ID=Msa0448030;Name=Msa0448030 |
| chr3_3 | mRNA | 26995491 | 27005985 | 26995491 | ID=Msa0448030-mRNA-1;Parent=Msa0448030;Name=Msa0448030-mRNA-1;_AED=0.01;_eAED=0.01;_QI=77|1|1|1|1|1|10|358|499 |
| chr3_3 | exon | 26995491 | 26996060 | 26995491 | ID=Msa0448030-mRNA-1:exon:5285;Parent=Msa0448030-mRNA-1 |
| chr3_3 | exon | 26996407 | 26996488 | 26996407 | ID=Msa0448030-mRNA-1:exon:5284;Parent=Msa0448030-mRNA-1 |
| chr3_3 | exon | 26997274 | 26997528 | 26997274 | ID=Msa0448030-mRNA-1:exon:5283;Parent=Msa0448030-mRNA-1 |
| chr3_3 | exon | 26999483 | 26999632 | 26999483 | ID=Msa0448030-mRNA-1:exon:5282;Parent=Msa0448030-mRNA-1 |
| chr3_3 | exon | 27000800 | 27000943 | 27000800 | ID=Msa0448030-mRNA-1:exon:5281;Parent=Msa0448030-mRNA-1 |
| chr3_3 | exon | 27003664 | 27003818 | 27003664 | ID=Msa0448030-mRNA-1:exon:5280;Parent=Msa0448030-mRNA-1 |
| chr3_3 | exon | 27004377 | 27004438 | 27004377 | ID=Msa0448030-mRNA-1:exon:5279;Parent=Msa0448030-mRNA-1 |
| chr3_3 | exon | 27004617 | 27004754 | 27004617 | ID=Msa0448030-mRNA-1:exon:5278;Parent=Msa0448030-mRNA-1 |
| chr3_3 | exon | 27005492 | 27005741 | 27005492 | ID=Msa0448030-mRNA-1:exon:5277;Parent=Msa0448030-mRNA-1 |
| chr3_3 | exon | 27005857 | 27005985 | 27005857 | ID=Msa0448030-mRNA-1:exon:5276;Parent=Msa0448030-mRNA-1 |
| chr3_3 | five_prime_UTR | 27005909 | 27005985 | 27005909 | ID=Msa0448030-mRNA-1:five_prime_utr;Parent=Msa0448030-mRNA-1 |
| chr3_3 | CDS | 27005857 | 27005908 | 27005857 | ID=Msa0448030-mRNA-1:cds;Parent=Msa0448030-mRNA-1 |
| chr3_3 | CDS | 27005492 | 27005741 | 27005492 | ID=Msa0448030-mRNA-1:cds;Parent=Msa0448030-mRNA-1 |
| chr3_3 | CDS | 27004617 | 27004754 | 27004617 | ID=Msa0448030-mRNA-1:cds;Parent=Msa0448030-mRNA-1 |
| chr3_3 | CDS | 27004377 | 27004438 | 27004377 | ID=Msa0448030-mRNA-1:cds;Parent=Msa0448030-mRNA-1 |
| chr3_3 | CDS | 27003664 | 27003818 | 27003664 | ID=Msa0448030-mRNA-1:cds;Parent=Msa0448030-mRNA-1 |
| chr3_3 | CDS | 27000800 | 27000943 | 27000800 | ID=Msa0448030-mRNA-1:cds;Parent=Msa0448030-mRNA-1 |
| chr3_3 | CDS | 26999483 | 26999632 | 26999483 | ID=Msa0448030-mRNA-1:cds;Parent=Msa0448030-mRNA-1 |
| chr3_3 | CDS | 26997274 | 26997528 | 26997274 | ID=Msa0448030-mRNA-1:cds;Parent=Msa0448030-mRNA-1 |
| chr3_3 | CDS | 26996407 | 26996488 | 26996407 | ID=Msa0448030-mRNA-1:cds;Parent=Msa0448030-mRNA-1 |
| chr3_3 | CDS | 26995849 | 26996060 | 26995849 | ID=Msa0448030-mRNA-1:cds;Parent=Msa0448030-mRNA-1 |
| chr3_3 | three_prime_UTR | 26995491 | 26995848 | 26995491 | ID=Msa0448030-mRNA-1:three_prime_utr;Parent=Msa0448030-mRNA-1 |
| Gene Sequence |
| Protein sequence |
