AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0459360

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0459360 MtrunA17_Chr3g0107541 90.909 154 14 0 1 154 327 480 4.85e-102 302
Msa0459360 MtrunA17_Chr3g0107551 86.364 154 21 0 1 154 6 159 3.24e-99 284
Msa0459360 MtrunA17_Chr3g0105761 72.078 154 41 1 1 154 1 152 6.77e-82 240
Msa0459360 MtrunA17_Chr3g0107611 67.532 154 50 0 1 154 332 485 7.13e-77 238
Msa0459360 MtrunA17_Chr8g0370641 65.584 154 53 0 1 154 320 473 4.04e-73 228
Msa0459360 MtrunA17_Chr8g0370651 64.706 153 54 0 2 154 325 477 8.48e-72 224
Msa0459360 MtrunA17_Chr8g0372591 67.143 140 45 1 2 140 5 144 3.49e-67 200
Msa0459360 MtrunA17_Chr8g0371761 52.778 144 57 1 19 151 1 144 4.45e-52 162
Msa0459360 MtrunA17_Chr7g0254641 41.830 153 88 1 3 154 314 466 8.28e-39 137
Msa0459360 MtrunA17_Chr2g0310351 37.013 154 94 1 1 154 2 152 3.94e-38 129
Msa0459360 MtrunA17_Chr4g0046681 37.838 148 91 1 1 148 32 178 6.89e-36 124
Msa0459360 MtrunA17_Chr8g0344151 40.268 149 86 1 6 154 311 456 1.57e-35 128
Msa0459360 MtrunA17_Chr3g0086661 41.333 150 87 1 3 151 306 455 1.96e-35 128
Msa0459360 MtrunA17_Chr3g0086651 40.667 150 88 1 3 151 306 455 2.00e-35 128
Msa0459360 MtrunA17_Chr2g0310391 36.364 154 95 1 1 154 295 445 3.80e-35 127
Msa0459360 MtrunA17_Chr2g0310381 36.364 154 95 1 1 154 295 445 9.26e-35 126
Msa0459360 MtrunA17_Chr3g0094171 38.255 149 92 0 3 151 310 458 4.02e-34 124
Msa0459360 MtrunA17_Chr8g0382901 37.333 150 91 1 5 154 281 427 5.29e-34 125
Msa0459360 MtrunA17_Chr8g0382901 36.667 150 92 1 5 154 760 906 4.41e-33 123
Msa0459360 MtrunA17_Chr8g0344181 38.926 149 88 1 6 154 313 458 8.54e-34 124
Msa0459360 MtrunA17_Chr4g0053621 38.158 152 86 1 1 152 304 447 8.70e-34 124
Msa0459360 MtrunA17_Chr1g0174431 38.411 151 88 2 5 151 6 155 6.50e-33 115
Msa0459360 MtrunA17_Chr1g0174441 38.667 150 90 2 2 151 331 478 8.57e-33 121
Msa0459360 MtrunA17_Chr7g0224551 39.355 155 84 3 3 151 301 451 1.06e-32 120
Msa0459360 MtrunA17_Chr4g0046351 37.013 154 92 2 3 152 304 456 1.39e-32 120
Msa0459360 MtrunA17_Chr3g0094231 36.842 152 96 0 3 154 303 454 2.67e-32 119
Msa0459360 MtrunA17_Chr7g0255531 36.913 149 91 1 3 151 300 445 3.22e-32 119
Msa0459360 MtrunA17_Chr4g0046331 36.306 157 93 2 3 153 304 459 4.59e-32 119
Msa0459360 MtrunA17_Chr8g0372331 60.256 78 31 0 77 154 1 78 4.78e-32 111
Msa0459360 MtrunA17_Chr2g0314721 38.889 162 87 2 2 154 311 469 1.58e-31 117
Msa0459360 MtrunA17_Chr4g0046321 35.714 154 94 2 3 152 304 456 2.19e-31 117
Msa0459360 MtrunA17_Chr7g0224561 38.065 155 86 3 3 151 301 451 2.41e-31 117
Msa0459360 MtrunA17_Chr6g0458561 36.842 152 95 1 1 152 329 479 2.76e-31 117
Msa0459360 MtrunA17_Chr1g0213671 37.063 143 88 1 12 154 319 459 3.02e-31 117
Msa0459360 MtrunA17_Chr4g0061381 37.333 150 93 1 3 151 303 452 4.66e-31 116
Msa0459360 MtrunA17_Chr8g0344191 38.255 149 90 2 6 154 344 490 6.80e-31 116
Msa0459360 MtrunA17_Chr4g0056951 39.041 146 86 2 6 151 318 460 1.06e-30 115
Msa0459360 MtrunA17_Chr1g0174451 36.667 150 93 2 2 151 310 457 1.44e-30 115
Msa0459360 MtrunA17_Chr3g0086691 36.184 152 96 1 1 151 304 455 1.48e-30 115
Msa0459360 MtrunA17_Chr8g0362701 34.000 150 98 1 2 151 308 456 2.58e-30 114
Msa0459360 MtrunA17_Chr8g0372251 37.162 148 90 2 1 148 307 451 2.79e-30 114
Msa0459360 MtrunA17_Chr1g0164211 38.667 150 89 1 2 151 297 443 3.04e-30 114
Msa0459360 MtrunA17_Chr1g0174461 38.356 146 88 2 2 147 309 452 3.22e-30 114
Msa0459360 MtrunA17_Chr2g0314731 37.654 162 89 2 2 154 300 458 3.35e-30 114
Msa0459360 MtrunA17_Chr8g0339331 36.364 154 97 1 1 154 316 468 3.88e-30 114
Msa0459360 MtrunA17_Chr4g0057001 40.397 151 87 2 1 151 318 465 6.03e-30 113
Msa0459360 MtrunA17_Chr7g0235551 35.714 154 95 2 1 151 305 457 6.33e-30 113
Msa0459360 MtrunA17_Chr4g0052861 36.735 147 85 1 1 147 300 438 8.62e-30 112
Msa0459360 MtrunA17_Chr5g0401681 39.189 148 80 2 1 147 300 438 8.68e-30 112
Msa0459360 MtrunA17_Chr3g0116681 35.526 152 95 1 3 154 307 455 1.23e-29 112
Msa0459360 MtrunA17_Chr1g0174481 35.333 150 95 2 2 151 304 451 1.23e-29 112
Msa0459360 MtrunA17_Chr3g0084921 35.948 153 96 2 3 154 312 463 1.26e-29 112
Msa0459360 MtrunA17_Chr7g0246151 38.255 149 89 1 3 151 306 451 1.35e-29 112
Msa0459360 MtrunA17_Chr7g0246121 36.913 149 91 1 3 151 304 449 1.41e-29 112
Msa0459360 MtrunA17_Chr5g0405001 37.748 151 91 2 1 151 315 462 1.42e-29 112
Msa0459360 MtrunA17_Chr2g0314781 37.838 148 80 2 16 154 1 145 1.43e-29 106
Msa0459360 MtrunA17_Chr6g0484841 37.838 148 88 2 5 151 309 453 2.42e-29 111
Msa0459360 MtrunA17_Chr8g0362481 32.667 150 100 1 2 151 239 387 2.47e-29 110
Msa0459360 MtrunA17_Chr7g0258211 35.928 167 86 3 1 154 306 464 2.58e-29 111
Msa0459360 MtrunA17_Chr4g0039901 37.086 151 92 1 2 152 302 449 2.82e-29 111
Msa0459360 MtrunA17_Chr5g0395321 34.932 146 92 1 6 151 304 446 3.37e-29 111
Msa0459360 MtrunA17_Chr5g0395381 34.247 146 93 1 6 151 279 421 3.49e-29 110
Msa0459360 MtrunA17_Chr7g0246221 36.000 150 93 1 2 151 306 452 3.77e-29 110
Msa0459360 MtrunA17_Chr4g0052881 37.086 151 87 1 1 151 301 443 3.96e-29 110
Msa0459360 MtrunA17_Chr4g0046661 37.838 148 91 1 1 148 26 172 4.46e-29 106
Msa0459360 MtrunA17_Chr4g0030701 37.333 150 92 2 3 151 313 461 5.25e-29 110
Msa0459360 MtrunA17_Chr5g0395331 34.694 147 93 1 5 151 310 453 6.40e-29 110
Msa0459360 MtrunA17_Chr4g0035921 36.424 151 93 2 1 151 315 462 6.80e-29 110
Msa0459360 MtrunA17_Chr8g0356001 35.948 153 95 1 2 154 309 458 1.07e-28 109
Msa0459360 MtrunA17_Chr4g0030711 36.667 150 93 2 3 151 316 464 1.30e-28 109
Msa0459360 MtrunA17_Chr1g0198191 36.913 149 91 3 6 153 322 468 1.42e-28 109
Msa0459360 MtrunA17_Chr5g0430131 34.868 152 95 2 1 151 304 452 1.45e-28 109
Msa0459360 MtrunA17_Chr6g0451811 36.054 147 93 1 5 151 10 155 2.00e-28 104
Msa0459360 MtrunA17_Chr6g0463801 37.762 143 86 1 9 151 307 446 2.37e-28 108
Msa0459360 MtrunA17_Chr5g0403331 35.762 151 94 1 1 151 306 453 2.48e-28 108
Msa0459360 MtrunA17_Chr6g0472311 32.895 152 99 1 3 154 320 468 6.94e-28 107
Msa0459360 MtrunA17_Chr6g0451691 37.671 146 90 1 6 151 334 478 7.11e-28 107
Msa0459360 MtrunA17_Chr4g0058261 34.228 149 95 1 5 153 337 482 8.09e-28 107
Msa0459360 MtrunA17_Chr1g0174471 34.667 150 96 2 2 151 325 472 1.22e-27 107
Msa0459360 MtrunA17_Chr5g0419451 33.333 147 94 2 6 151 326 469 1.49e-27 106
Msa0459360 MtrunA17_Chr6g0451751 35.570 149 95 1 6 154 330 477 1.62e-27 106
Msa0459360 MtrunA17_Chr4g0052851 36.000 150 88 1 2 151 292 433 1.82e-27 106
Msa0459360 MtrunA17_Chr6g0451771 34.694 147 95 1 5 151 27 172 2.01e-27 102
Msa0459360 MtrunA17_Chr7g0258221 34.437 151 97 2 1 151 307 455 2.35e-27 106
Msa0459360 MtrunA17_Chr3g0082701 39.189 148 87 2 5 151 330 475 2.65e-27 106
Msa0459360 MtrunA17_Chr2g0280011 33.113 151 95 2 6 151 14 163 2.92e-27 101
Msa0459360 MtrunA17_Chr2g0296651 34.694 147 88 1 1 147 300 438 2.94e-27 105
Msa0459360 MtrunA17_Chr8g0390871 35.570 149 91 3 6 153 33 177 3.08e-27 101
Msa0459360 MtrunA17_Chr4g0047661 33.553 152 98 1 3 154 321 469 3.25e-27 105
Msa0459360 MtrunA17_Chr6g0484811 32.895 152 98 2 3 153 308 456 3.85e-27 105
Msa0459360 MtrunA17_Chr4g0046631 36.424 151 95 1 1 151 320 469 3.96e-27 105
Msa0459360 MtrunA17_Chr1g0207841 36.184 152 88 3 3 151 318 463 4.59e-27 105
Msa0459360 MtrunA17_Chr6g0451641 34.437 151 98 1 1 151 318 467 4.79e-27 105
Msa0459360 MtrunA17_Chr5g0401691 33.333 147 92 1 1 147 315 455 5.41e-27 105
Msa0459360 MtrunA17_Chr4g0074581 34.437 151 98 1 3 152 345 495 5.46e-27 105
Msa0459360 MtrunA17_Chr4g0058201 34.459 148 86 2 6 149 299 439 6.18e-27 104
Msa0459360 MtrunA17_Chr7g0265611 37.662 154 92 3 2 154 319 469 6.20e-27 105
Msa0459360 MtrunA17_Chr4g0039391 35.762 151 93 1 1 151 305 451 6.42e-27 104
Msa0459360 MtrunA17_Chr1g0176831 35.802 162 92 2 2 154 330 488 8.08e-27 104
Msa0459360 MtrunA17_Chr2g0296661 37.500 152 87 1 1 152 305 448 8.34e-27 104
Msa0459360 MtrunA17_Chr6g0451681 32.877 146 97 1 6 151 283 427 1.14e-26 103
Msa0459360 MtrunA17_Chr4g0058281 32.886 149 97 1 6 154 320 465 1.77e-26 103
Msa0459360 MtrunA17_Chr5g0402981 33.803 142 92 2 11 151 3 143 1.98e-26 98.6
Msa0459360 MtrunA17_Chr8g0339311 33.562 146 97 0 9 154 331 476 2.06e-26 103
Msa0459360 MtrunA17_Chr2g0280061 35.294 153 89 4 6 151 14 163 2.80e-26 98.6
Msa0459360 MtrunA17_Chr4g0058231 33.333 147 95 1 3 149 305 448 2.82e-26 103
Msa0459360 MtrunA17_Chr4g0047691 32.468 154 101 1 1 154 317 467 3.36e-26 102
Msa0459360 MtrunA17_Chr8g0390881 36.000 150 91 3 3 151 308 453 3.45e-26 102
Msa0459360 MtrunA17_Chr6g0465511 36.301 146 90 1 6 151 308 450 3.58e-26 102
Msa0459360 MtrunA17_Chr6g0466331 36.301 146 90 1 6 151 308 450 3.58e-26 102
Msa0459360 MtrunA17_Chr3g0116741 32.667 150 98 1 2 151 318 464 4.10e-26 102
Msa0459360 MtrunA17_Chr2g0280081 33.775 151 94 2 6 151 807 956 1.01e-25 102
Msa0459360 MtrunA17_Chr2g0280081 32.468 154 98 2 3 151 303 455 2.71e-23 95.1
Msa0459360 MtrunA17_Chr2g0304871 35.507 138 88 1 14 151 329 465 1.18e-25 101
Msa0459360 MtrunA17_Chr1g0160861 34.437 151 96 1 2 152 141 288 1.18e-25 99.8
Msa0459360 MtrunA17_Chr8g0351801 31.677 161 102 3 1 154 311 470 1.82e-25 100
Msa0459360 MtrunA17_Chr8g0387101 34.211 152 93 3 6 151 307 457 1.93e-25 100
Msa0459360 MtrunA17_Chr5g0403351 33.333 150 97 1 2 151 306 452 3.30e-25 100
Msa0459360 MtrunA17_Chr8g0361471 35.616 146 91 1 6 151 308 450 3.74e-25 100
Msa0459360 MtrunA17_Chr4g0058211 29.412 153 105 1 2 154 21 170 3.90e-25 95.9
Msa0459360 MtrunA17_Chr4g0047641 30.921 152 102 1 3 154 320 468 4.45e-25 99.8
Msa0459360 MtrunA17_Chr6g0451781 34.694 147 95 1 5 151 362 507 6.63e-25 99.4
Msa0459360 MtrunA17_Chr8g0355961 36.420 162 91 2 2 154 309 467 6.69e-25 99.4
Msa0459360 MtrunA17_Chr1g0200961 35.099 151 95 1 2 152 300 447 6.71e-25 99.4
Msa0459360 MtrunA17_Chr1g0210091 33.117 154 97 3 2 151 336 487 7.05e-25 99.4
Msa0459360 MtrunA17_Chr5g0430101 32.667 150 97 2 3 151 304 450 7.43e-25 99.0
Msa0459360 MtrunA17_Chr1g0197871 34.356 163 94 3 1 154 298 456 8.88e-25 99.0
Msa0459360 MtrunA17_Chr1g0205361 33.775 151 97 1 2 152 300 447 9.21e-25 99.0
Msa0459360 MtrunA17_Chr4g0008101 35.616 146 93 1 6 151 330 474 1.29e-24 98.6
Msa0459360 MtrunA17_Chr5g0446151 37.241 145 87 2 9 153 312 452 1.33e-24 98.6
Msa0459360 MtrunA17_Chr1g0160851 33.775 151 97 1 2 152 300 447 1.39e-24 98.2
Msa0459360 MtrunA17_Chr6g0466941 33.553 152 99 2 1 151 318 468 1.57e-24 98.2
Msa0459360 MtrunA17_Chr5g0430081 34.416 154 93 3 1 151 303 451 1.93e-24 97.8
Msa0459360 MtrunA17_Chr6g0451741 34.247 146 95 1 6 151 352 496 2.08e-24 98.2
Msa0459360 MtrunA17_Chr5g0432751 31.373 153 104 1 2 154 306 457 2.14e-24 97.8
Msa0459360 MtrunA17_Chr3g0101631 32.877 146 95 1 6 151 303 445 2.21e-24 97.8
Msa0459360 MtrunA17_Chr1g0197851 33.742 163 95 3 1 154 298 456 2.74e-24 97.4
Msa0459360 MtrunA17_Chr1g0197891 33.742 163 95 3 1 154 298 456 3.14e-24 97.4
Msa0459360 MtrunA17_Chr4g0047631 31.579 152 101 1 3 154 316 464 3.18e-24 97.4
Msa0459360 MtrunA17_Chr1g0197881 33.742 163 95 3 1 154 297 455 3.30e-24 97.1
Msa0459360 MtrunA17_Chr8g0377341 32.653 147 95 2 6 151 335 478 3.86e-24 97.1
Msa0459360 MtrunA17_Chr3g0101701 34.437 151 96 1 1 151 307 454 4.10e-24 97.1
Msa0459360 MtrunA17_Chr2g0280121 31.818 154 99 2 3 151 309 461 5.06e-24 96.7
Msa0459360 MtrunA17_Chr2g0280071 31.788 151 97 2 6 151 339 488 5.14e-24 97.1
Msa0459360 MtrunA17_Chr1g0200951 32.886 149 97 3 6 151 332 480 6.36e-24 96.7
Msa0459360 MtrunA17_Chr5g0413911 31.579 152 100 2 3 151 330 480 7.13e-24 96.3
Msa0459360 MtrunA17_Chr5g0430071 29.801 151 102 2 2 151 159 306 7.24e-24 95.1
Msa0459360 MtrunA17_Chr4g0058191 29.221 154 106 1 1 154 292 442 1.10e-23 95.9
Msa0459360 MtrunA17_Chr6g0466901 33.557 149 97 2 1 148 317 464 1.13e-23 95.9
Msa0459360 MtrunA17_Chr3g0101731 32.192 146 96 1 6 151 308 450 1.24e-23 95.5
Msa0459360 MtrunA17_Chr6g0477081 42.857 105 60 0 6 110 137 241 1.32e-23 92.4
Msa0459360 MtrunA17_Chr5g0430031 30.921 152 101 2 1 151 305 453 1.90e-23 95.1
Msa0459360 MtrunA17_Chr3g0101611 32.867 143 93 1 9 151 313 452 1.92e-23 95.1
Msa0459360 MtrunA17_Chr4g0046701 40.000 110 65 1 42 151 1 109 2.11e-23 90.1
Msa0459360 MtrunA17_Chr3g0101711 34.932 146 92 1 6 151 311 453 2.24e-23 95.1
Msa0459360 MtrunA17_Chr3g0101591 32.394 142 93 1 10 151 49 187 2.69e-23 91.7
Msa0459360 MtrunA17_Chr5g0446161 34.459 148 93 2 6 153 308 451 2.71e-23 94.7
Msa0459360 MtrunA17_Chr8g0346261 30.405 148 100 3 6 151 350 496 3.55e-23 94.4
Msa0459360 MtrunA17_Chr5g0445441 31.293 147 98 1 2 148 344 487 4.05e-23 94.4
Msa0459360 MtrunA17_Chr3g0101601 32.192 146 97 1 6 151 303 446 5.14e-23 94.0
Msa0459360 MtrunA17_Chr5g0445451 30.667 150 101 1 2 151 303 449 5.95e-23 93.6
Msa0459360 MtrunA17_Chr1g0205371 36.424 151 93 1 2 152 301 448 6.28e-23 93.6
Msa0459360 MtrunA17_Chr5g0431501 29.252 147 101 1 2 148 305 448 6.76e-23 93.6
Msa0459360 MtrunA17_Chr5g0431461 29.252 147 101 1 2 148 305 448 6.76e-23 93.6
Msa0459360 MtrunA17_Chr8g0364651 30.065 153 105 1 1 151 297 449 6.90e-23 93.6
Msa0459360 MtrunA17_Chr5g0430091 32.680 153 99 2 3 154 307 456 1.01e-22 93.2
Msa0459360 MtrunA17_Chr3g0101671 32.877 146 95 1 6 151 312 454 1.07e-22 93.2
Msa0459360 MtrunA17_Chr3g0101621 32.192 146 97 1 6 151 297 440 2.25e-22 92.0
Msa0459360 MtrunA17_Chr5g0409051 29.412 153 107 1 1 152 309 461 2.49e-22 92.0
Msa0459360 MtrunA17_Chr2g0280041 31.788 151 97 2 6 151 338 487 2.56e-22 92.0
Msa0459360 MtrunA17_Chr6g0463621 29.932 147 101 2 6 151 7 152 2.57e-22 88.2
Msa0459360 MtrunA17_Chr5g0446101 34.028 144 91 2 9 152 124 263 2.63e-22 90.5
Msa0459360 MtrunA17_Chr5g0445421 30.872 149 100 1 3 151 357 502 2.89e-22 92.0
Msa0459360 MtrunA17_Chr5g0445461 33.775 151 97 2 1 151 302 449 2.94e-22 91.7
Msa0459360 MtrunA17_Chr7g0246131 34.667 150 95 1 2 151 307 453 4.39e-22 91.3
Msa0459360 MtrunA17_Chr5g0423621 33.083 133 86 1 16 148 1 130 4.74e-22 87.0
Msa0459360 MtrunA17_Chr4g0017411 33.333 150 92 1 2 151 289 430 5.11e-22 91.3
Msa0459360 MtrunA17_Chr5g0431641 32.215 149 98 1 3 151 304 449 5.25e-22 91.3
Msa0459360 MtrunA17_Chr1g0162811 34.247 146 92 2 6 151 308 449 5.88e-22 90.9
Msa0459360 MtrunA17_Chr6g0463791 31.293 147 99 2 6 151 303 448 8.44e-22 90.5
Msa0459360 MtrunA17_Chr5g0431671 32.192 146 96 1 6 151 308 450 8.75e-22 90.5
Msa0459360 MtrunA17_Chr3g0101661 31.507 146 97 1 6 151 311 453 8.83e-22 90.5
Msa0459360 MtrunA17_Chr3g0101651 32.192 146 96 1 6 151 312 454 1.92e-21 89.4
Msa0459360 MtrunA17_Chr5g0430111 30.894 123 84 1 1 122 305 427 2.51e-21 89.0
Msa0459360 MtrunA17_Chr3g0101721 30.137 146 99 1 6 151 310 452 5.71e-21 88.2
Msa0459360 MtrunA17_Chr5g0431511 29.730 148 101 1 1 148 304 448 6.78e-21 87.8
Msa0459360 MtrunA17_Chr5g0403321 29.530 149 102 1 3 151 310 455 6.79e-21 87.8
Msa0459360 MtrunA17_Chr7g0246181 35.333 150 94 1 2 151 305 451 7.88e-21 87.8
Msa0459360 MtrunA17_Chr7g0218611 33.113 151 97 2 1 151 303 449 1.51e-20 87.0
Msa0459360 MtrunA17_Chr5g0445531 30.822 146 98 1 6 151 306 448 1.65e-20 86.7
Msa0459360 MtrunA17_Chr5g0445761 33.333 153 99 1 1 153 2 151 5.83e-20 82.0
Msa0459360 MtrunA17_Chr5g0445381 29.530 149 102 1 3 151 335 480 6.25e-20 85.1
Msa0459360 MtrunA17_Chr1g0156101 29.333 150 103 1 2 151 314 460 7.30e-20 85.1
Msa0459360 MtrunA17_Chr3g0101811 28.767 146 101 1 6 151 323 465 8.36e-20 84.7
Msa0459360 MtrunA17_Chr5g0430151 32.258 124 80 2 31 153 6 126 8.40e-20 81.3
Msa0459360 MtrunA17_Chr4g0020041 29.452 146 100 1 6 151 309 451 8.54e-20 84.7
Msa0459360 MtrunA17_Chr5g0431591 29.452 146 100 1 6 151 125 267 1.37e-19 83.2
Msa0459360 MtrunA17_Chr3g0101581 30.137 146 99 1 6 151 309 451 1.50e-19 84.0
Msa0459360 MtrunA17_Chr4g0024771 30.137 146 99 1 6 151 307 449 1.55e-19 84.0
Msa0459360 MtrunA17_Chr3g0101691 30.137 146 99 1 6 151 312 454 3.26e-19 83.2
Msa0459360 MtrunA17_Chr4g0011921 30.435 138 93 1 14 151 311 445 4.27e-19 82.8
Msa0459360 MtrunA17_Chr4g0011901 30.405 148 100 1 1 148 298 442 5.40e-19 82.4
Msa0459360 MtrunA17_Chr4g0011851 26.490 151 108 1 1 151 17 164 5.60e-19 79.7
Msa0459360 MtrunA17_Chr4g0076161 30.405 148 100 2 6 151 306 452 7.07e-19 82.0
Msa0459360 MtrunA17_Chr1g0167321 33.562 146 94 1 6 151 307 449 1.02e-18 81.6
Msa0459360 MtrunA17_Chr4g0011941 27.815 151 106 1 1 151 2 149 1.08e-18 78.6
Msa0459360 MtrunA17_Chr3g0101571 30.137 146 99 2 6 151 306 448 1.15e-18 81.6
Msa0459360 MtrunA17_Chr3g0086681 34.545 110 71 1 43 151 8 117 1.72e-18 77.8
Msa0459360 MtrunA17_Chr4g0011961 29.054 148 102 1 1 148 297 441 1.73e-18 81.3
Msa0459360 MtrunA17_Chr7g0218601 33.113 151 95 3 1 151 304 448 1.93e-18 80.9
Msa0459360 MtrunA17_Chr5g0445351 33.065 124 80 1 28 151 52 172 3.61e-18 77.8
Msa0459360 MtrunA17_Chr5g0444981 33.803 142 90 2 6 147 17 154 6.19e-18 77.0
Msa0459360 MtrunA17_Chr3g0101741 29.452 146 95 2 6 151 235 372 8.60e-18 79.0
Msa0459360 MtrunA17_Chr8g0357431 32.877 146 95 1 6 151 309 451 1.31e-17 78.6
Msa0459360 MtrunA17_Chr2g0280261 30.464 151 102 1 1 151 296 443 2.00e-17 78.2
Msa0459360 MtrunA17_Chr3g0101821 31.081 148 99 1 6 153 308 452 2.35e-17 77.8
Msa0459360 MtrunA17_Chr1g0162801 32.877 146 95 1 6 151 310 452 2.85e-17 77.8
Msa0459360 MtrunA17_Chr5g0430041 32.258 124 76 3 31 151 6 124 3.66e-17 74.3
Msa0459360 MtrunA17_Chr3g0101751 31.507 146 97 1 6 151 315 457 8.05e-17 76.3
Msa0459360 MtrunA17_Chr3g0101801 30.822 146 98 1 6 151 315 457 8.14e-17 76.3
Msa0459360 MtrunA17_Chr3g0101761 32.192 146 96 1 6 151 308 450 8.48e-17 76.3
Msa0459360 MtrunA17_Chr3g0116731 33.663 101 60 1 51 151 1 94 1.64e-16 71.6
Msa0459360 MtrunA17_Chr8g0357421 32.192 146 96 1 6 151 308 450 2.01e-16 75.1
Msa0459360 MtrunA17_Chr3g0101831 30.137 146 99 1 6 151 309 451 2.21e-16 75.1
Msa0459360 MtrunA17_Chr5g0419691 26.812 138 98 1 14 151 311 445 3.36e-16 74.7
Msa0459360 MtrunA17_Chr5g0406651 28.477 151 105 1 1 151 299 446 4.90e-16 73.9
Msa0459360 MtrunA17_Chr8g0387001 31.646 158 94 4 1 147 301 455 7.73e-16 73.6
Msa0459360 MtrunA17_Chr8g0364631 34.821 112 65 2 47 151 347 457 1.31e-15 72.8
Msa0459360 MtrunA17_Chr4g0011981 27.027 148 105 1 1 148 298 442 1.61e-15 72.4
Msa0459360 MtrunA17_Chr0c19g0493771 30.128 156 98 4 1 152 454 602 3.04e-15 72.0
Msa0459360 MtrunA17_Chr1g0156061 28.667 150 104 1 2 151 270 416 4.14e-15 71.2
Msa0459360 MtrunA17_Chr1g0156081 28.667 150 104 1 2 151 338 484 4.35e-15 71.2
Msa0459360 MtrunA17_Chr8g0348751 29.747 158 99 4 1 147 304 460 8.39e-15 70.5
Msa0459360 MtrunA17_Chr5g0429651 30.380 158 99 3 1 147 301 458 1.27e-14 70.1
Msa0459360 MtrunA17_Chr4g0011871 25.362 138 100 1 14 151 312 446 1.47e-14 69.7
Msa0459360 MtrunA17_Chr4g0028321 39.744 78 45 1 74 151 31 106 2.09e-14 66.6
Msa0459360 MtrunA17_Chr4g0011881 27.815 151 106 1 1 151 298 445 4.04e-14 68.6
Msa0459360 MtrunA17_Chr4g0056981 42.857 70 40 0 26 95 1 70 4.81e-14 63.2
Msa0459360 MtrunA17_Chr8g0351401 28.931 159 98 4 1 147 304 459 6.22e-14 68.2
Msa0459360 MtrunA17_Chr3g0117301 29.703 101 68 1 51 151 1 98 2.33e-13 62.8
Msa0459360 MtrunA17_Chr2g0334021 29.870 154 93 5 6 154 311 454 3.00e-13 66.2
Msa0459360 MtrunA17_Chr3g0101541 32.353 102 66 1 50 151 3 101 3.21e-13 62.8
Msa0459360 MtrunA17_Chr4g0038271 28.931 159 98 4 1 147 355 510 3.36e-13 65.9
Msa0459360 MtrunA17_Chr5g0445371 26.562 128 85 2 24 151 61 179 7.69e-13 63.9
Msa0459360 MtrunA17_Chr1g0179811 28.571 147 103 2 1 147 345 489 2.49e-12 63.5
Msa0459360 MtrunA17_Chr3g0104351 27.500 160 103 3 1 147 307 466 3.67e-12 62.8
Msa0459360 MtrunA17_Chr8g0351311 27.673 159 99 4 1 147 307 461 3.91e-12 62.8
Msa0459360 MtrunA17_Chr7g0248991 29.752 121 75 3 1 117 236 350 5.15e-12 62.4
Msa0459360 MtrunA17_Chr7g0225531 26.174 149 107 3 1 147 314 461 7.81e-12 62.0
Msa0459360 MtrunA17_Chr3g0135841 31.250 144 91 5 9 147 344 484 1.35e-11 61.2
Msa0459360 MtrunA17_Chr1g0151221 29.167 144 94 5 9 147 336 476 2.80e-11 60.5
Msa0459360 MtrunA17_Chr8g0334941 32.026 153 95 5 1 147 129 278 2.89e-11 60.1
Msa0459360 MtrunA17_Chr8g0334891 33.103 145 88 5 9 147 292 433 3.70e-11 60.1
Msa0459360 MtrunA17_Chr8g0351391 27.389 157 102 3 1 147 306 460 4.40e-11 59.7
Msa0459360 MtrunA17_Chr1g0204271 28.395 162 98 6 1 147 297 455 4.53e-11 59.7
Msa0459360 MtrunA17_Chr1g0163421 29.861 144 94 5 9 147 349 490 5.10e-11 59.7
Msa0459360 MtrunA17_Chr1g0164321 27.329 161 101 3 1 147 339 497 5.81e-11 59.3
Msa0459360 MtrunA17_Chr6g0449381 27.891 147 99 3 6 147 311 455 8.69e-11 58.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0459360 AT2G22330.1 61.688 154 58 1 1 154 336 488 1.11e-66 211
Msa0459360 AT2G22330.2 61.688 154 58 1 1 154 359 511 1.32e-66 212
Msa0459360 AT4G39950.1 61.039 154 59 1 1 154 334 486 4.92e-66 210
Msa0459360 AT4G39950.2 61.039 154 59 1 1 154 374 526 1.45e-65 209
Msa0459360 AT5G05260.1 57.792 154 64 1 1 154 292 444 4.54e-65 206
Msa0459360 AT5G05260.2 57.792 154 64 1 1 154 324 476 1.01e-64 206
Msa0459360 AT1G16400.1 57.419 155 64 1 2 154 327 481 7.73e-64 204
Msa0459360 AT1G16410.1 57.419 155 64 1 2 154 328 482 1.33e-63 203
Msa0459360 AT1G79370.1 57.333 150 62 1 5 154 339 486 1.86e-62 201
Msa0459360 AT1G58260.1 55.696 158 63 2 2 154 319 474 1.91e-59 192
Msa0459360 AT1G01280.1 43.506 154 85 2 3 154 307 460 1.10e-39 140
Msa0459360 AT5G35917.1 48.387 124 49 1 1 124 328 436 5.00e-38 135
Msa0459360 AT2G40890.1 38.926 149 88 1 3 151 299 444 9.15e-35 126
Msa0459360 AT1G28430.1 39.073 151 89 2 6 154 312 461 1.06e-34 126
Msa0459360 AT3G32047.1 38.411 151 92 1 1 151 308 457 2.28e-34 125
Msa0459360 AT5G07990.1 40.667 150 88 1 3 151 302 451 2.76e-34 125
Msa0459360 AT4G37340.1 39.456 147 81 1 1 147 298 436 1.62e-33 123
Msa0459360 AT1G66540.2 38.095 147 83 1 1 147 126 264 2.95e-33 119
Msa0459360 AT5G35920.1 52.381 105 45 2 50 154 3 102 3.30e-33 115
Msa0459360 AT1G74540.1 38.411 151 90 2 1 151 290 437 3.66e-33 122
Msa0459360 AT2G14100.1 35.762 151 96 1 1 151 310 459 9.06e-33 121
Msa0459360 AT1G66540.1 38.095 147 83 1 1 147 185 323 9.95e-33 119
Msa0459360 AT5G36220.2 36.364 154 90 1 1 154 158 303 1.29e-32 119
Msa0459360 AT3G28740.1 38.776 147 82 2 1 147 306 444 1.33e-32 120
Msa0459360 AT4G37430.1 38.312 154 91 1 1 154 298 447 1.44e-32 120
Msa0459360 AT4G12300.1 37.671 146 89 1 6 151 317 460 1.46e-32 120
Msa0459360 AT4G37330.1 39.735 151 83 1 1 151 295 437 2.16e-32 120
Msa0459360 AT2G27000.1 36.842 152 93 2 2 151 308 458 2.46e-32 120
Msa0459360 AT1G16410.2 57.471 87 37 0 2 88 328 414 9.51e-32 117
Msa0459360 AT3G20130.2 36.538 156 91 3 6 154 286 440 1.00e-31 118
Msa0459360 AT2G45550.1 37.584 149 90 1 3 151 311 456 1.02e-31 118
Msa0459360 AT5G36220.1 35.714 154 91 1 1 154 304 449 1.12e-31 118
Msa0459360 AT3G20130.1 36.538 156 91 3 6 154 314 468 1.13e-31 118
Msa0459360 AT3G20950.1 36.364 154 85 3 1 147 313 460 1.40e-31 118
Msa0459360 AT4G37400.1 38.961 154 92 1 1 154 293 444 1.62e-31 117
Msa0459360 AT3G20120.2 34.395 157 90 3 2 151 173 323 1.88e-31 116
Msa0459360 AT3G20120.3 34.395 157 90 3 2 151 173 323 1.88e-31 116
Msa0459360 AT3G20120.1 34.395 157 90 3 2 151 173 323 1.88e-31 116
Msa0459360 AT2G45570.1 38.926 149 88 1 3 151 312 457 2.24e-31 117
Msa0459360 AT1G33730.1 38.000 150 90 1 2 151 174 320 3.97e-31 115
Msa0459360 AT1G33730.2 38.000 150 90 1 2 151 174 320 3.97e-31 115
Msa0459360 AT1G74550.1 37.086 151 92 2 1 151 284 431 3.98e-31 116
Msa0459360 AT4G12320.1 35.616 146 92 1 6 151 319 462 5.55e-31 116
Msa0459360 AT4G37360.1 37.762 143 81 1 5 147 302 436 8.20e-31 115
Msa0459360 AT3G20120.4 34.177 158 91 3 1 151 308 459 8.93e-31 115
Msa0459360 AT5G57220.1 37.662 154 88 1 1 154 293 438 9.44e-31 115
Msa0459360 AT4G37320.1 37.013 154 89 1 1 154 298 443 1.46e-30 115
Msa0459360 AT3G20140.1 37.086 151 92 2 1 151 309 456 1.98e-30 115
Msa0459360 AT3G20935.1 33.557 149 96 2 1 147 135 282 2.65e-30 112
Msa0459360 AT4G22710.1 37.162 148 90 1 1 148 322 466 3.24e-30 114
Msa0459360 AT4G37410.1 33.974 156 95 2 1 154 295 444 4.05e-30 114
Msa0459360 AT4G22690.1 37.162 148 90 1 1 148 353 497 4.37e-30 114
Msa0459360 AT4G36220.1 37.748 151 91 2 1 151 317 464 6.19e-30 113
Msa0459360 AT4G15350.1 34.868 152 96 2 2 151 304 454 8.14e-30 113
Msa0459360 AT4G15330.2 36.301 146 92 1 6 151 282 426 9.41e-30 112
Msa0459360 AT3G61040.1 38.312 154 91 2 2 154 298 448 9.83e-30 112
Msa0459360 AT3G20100.1 34.783 161 97 3 1 154 309 468 1.06e-29 113
Msa0459360 AT5G47990.1 35.897 156 92 4 3 154 312 463 1.15e-29 112
Msa0459360 AT4G15330.1 36.301 146 92 1 6 151 310 454 1.22e-29 112
Msa0459360 AT2G23190.1 36.364 154 90 2 1 154 342 487 1.51e-29 112
Msa0459360 AT4G12310.1 34.932 146 93 1 6 151 321 464 1.98e-29 112
Msa0459360 AT3G25180.1 37.671 146 88 1 6 151 316 458 3.17e-29 111
Msa0459360 AT5G42580.1 35.099 151 89 3 6 151 299 445 5.52e-29 110
Msa0459360 AT4G15360.1 37.500 152 83 3 6 152 314 458 7.07e-29 110
Msa0459360 AT3G20080.4 33.540 161 99 3 1 154 173 332 7.75e-29 109
Msa0459360 AT3G20080.5 33.540 161 99 3 1 154 173 332 7.75e-29 109
Msa0459360 AT3G20080.6 33.540 161 99 3 1 154 173 332 7.75e-29 109
Msa0459360 AT3G20080.3 33.540 161 99 3 1 154 173 332 7.75e-29 109
Msa0459360 AT3G20110.1 33.962 159 94 3 1 154 306 458 1.37e-28 110
Msa0459360 AT4G37370.1 36.054 147 86 1 1 147 297 435 1.61e-28 109
Msa0459360 AT2G45560.1 34.899 149 94 1 3 151 311 456 1.66e-28 109
Msa0459360 AT1G50560.1 34.868 152 96 2 2 151 314 464 1.68e-28 109
Msa0459360 AT2G23220.1 37.500 144 82 2 11 154 323 458 1.72e-28 109
Msa0459360 AT3G20080.2 33.540 161 99 3 1 154 310 469 1.90e-28 109
Msa0459360 AT3G20080.1 33.540 161 99 3 1 154 310 469 1.90e-28 109
Msa0459360 AT2G45580.2 36.000 150 92 3 2 151 158 303 2.18e-28 107
Msa0459360 AT1G33720.4 36.000 150 93 1 2 151 178 324 2.43e-28 107
Msa0459360 AT1G33720.3 36.000 150 93 1 2 151 178 324 2.43e-28 107
Msa0459360 AT1G33720.5 36.000 150 93 1 2 151 178 324 2.43e-28 107
Msa0459360 AT1G01190.1 35.333 150 95 2 6 153 335 484 2.68e-28 109
Msa0459360 AT3G20090.1 36.054 147 92 2 6 151 178 323 3.03e-28 107
Msa0459360 AT1G01190.2 35.333 150 95 2 6 153 340 489 3.08e-28 108
Msa0459360 AT1G33720.2 36.000 150 93 1 2 151 203 349 3.52e-28 107
Msa0459360 AT5G04330.1 37.500 152 91 3 1 151 305 453 3.83e-28 108
Msa0459360 AT3G20940.1 32.886 149 97 2 1 147 310 457 5.29e-28 108
Msa0459360 AT4G31940.1 31.544 149 102 0 6 154 324 472 7.02e-28 108
Msa0459360 AT1G64930.1 34.868 152 98 1 1 151 309 460 7.73e-28 107
Msa0459360 AT2G45580.1 36.000 150 92 3 2 151 312 457 9.07e-28 107
Msa0459360 AT1G33720.1 35.762 151 94 1 1 151 309 456 9.44e-28 107
Msa0459360 AT3G20090.2 36.054 147 92 2 6 151 316 461 1.03e-27 107
Msa0459360 AT1G50520.1 34.839 155 92 3 2 151 313 463 1.27e-27 107
Msa0459360 AT5G04660.1 34.228 149 94 2 6 152 317 463 2.04e-27 106
Msa0459360 AT1G64940.1 36.667 150 92 3 3 151 313 460 2.16e-27 106
Msa0459360 AT3G20960.1 35.811 148 93 2 6 152 211 357 2.34e-27 105
Msa0459360 AT4G15380.1 31.677 161 102 3 1 154 305 464 4.32e-27 105
Msa0459360 AT3G20960.2 35.811 148 93 2 6 152 314 460 6.22e-27 105
Msa0459360 AT1G74110.1 35.570 149 93 3 6 151 342 490 1.16e-26 104
Msa0459360 AT2G30490.1 32.680 153 102 1 2 154 305 456 3.79e-26 103
Msa0459360 AT5G04630.1 36.054 147 92 2 3 148 311 456 4.61e-26 102
Msa0459360 AT2G42250.1 31.056 161 99 3 2 154 309 465 7.87e-26 102
Msa0459360 AT4G37310.1 31.579 152 97 3 6 154 308 455 8.39e-26 102
Msa0459360 AT3G48310.1 35.417 144 89 2 6 148 295 435 8.83e-26 102
Msa0459360 AT5G44620.1 30.519 154 104 1 1 154 316 466 9.77e-26 102
Msa0459360 AT5G06900.1 35.915 142 85 3 6 147 307 442 1.22e-25 101
Msa0459360 AT2G27010.1 31.373 153 102 2 1 151 285 436 1.28e-25 101
Msa0459360 AT3G61880.1 33.333 150 98 2 6 153 333 482 1.45e-25 101
Msa0459360 AT2G46660.1 32.667 150 99 2 6 153 333 482 1.83e-25 101
Msa0459360 AT4G12330.1 31.818 154 102 2 1 154 315 465 1.85e-25 101
Msa0459360 AT3G61880.2 33.333 150 98 2 6 153 333 482 1.97e-25 101
Msa0459360 AT5G35715.1 32.903 155 100 2 1 154 237 388 4.52e-25 99.8
Msa0459360 AT3G48270.1 32.667 150 97 2 6 154 294 440 1.07e-24 99.0
Msa0459360 AT3G26210.1 29.605 152 103 2 1 151 301 449 1.69e-24 98.6
Msa0459360 AT5G67310.1 32.468 154 96 1 1 154 309 454 1.72e-24 98.6
Msa0459360 AT4G31950.1 31.159 138 95 0 10 147 316 453 2.13e-24 98.2
Msa0459360 AT3G48300.1 38.000 150 86 4 3 148 286 432 5.59e-24 97.1
Msa0459360 AT3G48300.2 38.000 150 86 4 3 148 288 434 5.64e-24 97.1
Msa0459360 AT3G26270.1 31.757 148 97 2 2 148 304 448 6.72e-24 96.7
Msa0459360 AT3G10570.1 31.757 148 100 1 6 153 319 465 6.84e-24 96.7
Msa0459360 AT3G10560.1 34.211 152 97 3 3 153 316 465 8.19e-24 96.7
Msa0459360 AT4G31970.1 29.655 145 102 0 10 154 327 471 1.06e-23 96.3
Msa0459360 AT2G25160.1 33.571 140 90 2 14 151 326 464 1.10e-23 96.3
Msa0459360 AT3G26160.1 30.921 152 101 2 1 151 302 450 2.90e-23 95.1
Msa0459360 AT3G52970.2 36.301 146 88 4 12 154 336 479 2.95e-23 95.1
Msa0459360 AT3G03470.1 34.194 155 96 3 3 151 306 460 3.03e-23 95.1
Msa0459360 AT3G52970.1 36.301 146 88 4 12 154 322 465 3.04e-23 95.1
Msa0459360 AT5G06905.1 29.091 165 104 3 2 154 300 463 4.68e-23 94.4
Msa0459360 AT5G25140.1 29.221 154 106 1 1 154 295 445 4.75e-23 94.4
Msa0459360 AT1G11600.1 35.762 151 95 2 3 151 311 461 8.46e-23 93.6
Msa0459360 AT5G25120.1 28.947 152 105 1 3 154 297 445 1.47e-22 93.2
Msa0459360 AT3G26180.2 31.126 151 100 2 2 151 169 316 1.64e-22 92.0
Msa0459360 AT1G13100.1 28.387 155 107 2 1 154 298 449 2.32e-22 92.4
Msa0459360 AT1G13110.1 28.758 153 105 2 2 153 305 454 2.60e-22 92.4
Msa0459360 AT3G48290.1 31.788 151 99 3 5 154 295 442 2.83e-22 92.0
Msa0459360 AT3G48280.1 32.639 144 93 2 6 148 294 434 2.93e-22 92.0
Msa0459360 AT5G25180.1 28.571 154 107 1 1 154 295 445 3.01e-22 92.0
Msa0459360 AT3G48290.2 31.788 151 99 3 5 154 321 468 3.05e-22 92.0
Msa0459360 AT3G26320.1 29.167 144 99 1 11 154 309 449 3.49e-22 92.0
Msa0459360 AT1G13090.2 28.387 155 107 2 1 154 298 449 3.61e-22 92.0
Msa0459360 AT3G26180.1 30.921 152 101 2 1 151 302 450 5.40e-22 91.3
Msa0459360 AT5G25130.1 28.289 152 106 1 3 154 297 445 5.99e-22 91.3
Msa0459360 AT3G26330.1 27.922 154 108 1 1 154 299 449 8.11e-22 90.9
Msa0459360 AT4G13310.1 31.944 144 94 2 12 154 309 449 8.46e-22 90.9
Msa0459360 AT3G53300.1 33.548 155 99 2 1 154 299 450 1.11e-21 90.5
Msa0459360 AT3G26310.1 28.571 154 107 1 1 154 298 448 1.16e-21 90.5
Msa0459360 AT1G13080.2 30.201 149 100 2 1 148 184 329 1.25e-21 89.7
Msa0459360 AT3G26230.1 30.872 149 98 2 2 148 300 445 1.30e-21 90.5
Msa0459360 AT1G13080.1 30.201 149 100 2 1 148 302 447 2.61e-21 89.4
Msa0459360 AT3G26280.2 29.139 151 102 2 3 151 322 469 2.65e-21 89.4
Msa0459360 AT3G26280.1 29.139 151 102 2 3 151 305 452 2.80e-21 89.4
Msa0459360 AT3G26830.1 27.465 142 99 2 14 154 311 449 3.55e-21 89.0
Msa0459360 AT3G26170.1 30.263 152 102 2 1 151 302 450 4.42e-21 89.0
Msa0459360 AT1G13710.1 31.757 148 96 3 6 151 321 465 5.00e-21 88.6
Msa0459360 AT2G12190.1 33.333 147 97 1 6 151 315 461 7.12e-21 88.2
Msa0459360 AT5G10600.1 31.544 149 97 1 6 154 318 461 7.74e-21 88.2
Msa0459360 AT2G24180.1 28.477 151 105 1 1 151 305 452 8.12e-21 88.2
Msa0459360 AT1G64950.1 34.014 147 94 3 6 151 315 459 1.29e-20 87.4
Msa0459360 AT3G26150.1 29.677 155 105 2 1 154 302 453 1.41e-20 87.4
Msa0459360 AT3G26300.1 27.922 154 108 1 1 154 299 449 1.69e-20 87.0
Msa0459360 AT4G31500.1 29.252 147 102 2 6 151 302 447 2.98e-20 86.7
Msa0459360 AT2G05180.1 30.935 139 81 3 6 139 314 442 4.17e-20 85.9
Msa0459360 AT4G13290.1 30.556 144 96 2 12 154 302 442 4.55e-20 85.9
Msa0459360 AT3G48320.1 34.228 149 94 2 1 148 290 435 4.77e-20 85.9
Msa0459360 AT4G13770.1 28.662 157 106 3 1 154 298 451 8.32e-20 85.1
Msa0459360 AT5G10610.1 30.872 149 98 1 6 154 302 445 1.25e-19 84.7
Msa0459360 AT3G44250.1 33.548 155 99 2 1 154 298 449 1.40e-19 84.7
Msa0459360 AT1G11610.2 32.215 149 96 3 5 151 300 445 1.45e-19 84.7
Msa0459360 AT1G11610.1 32.215 149 96 3 5 151 300 445 1.47e-19 84.3
Msa0459360 AT5G57260.1 26.282 156 109 2 1 153 299 451 1.87e-19 84.3
Msa0459360 AT2G30750.1 32.414 145 93 3 9 151 304 445 5.40e-19 82.8
Msa0459360 AT2G30770.1 31.034 145 95 3 9 151 304 445 1.41e-18 81.6
Msa0459360 AT5G09970.1 31.333 150 97 4 6 151 340 487 1.61e-18 81.6
Msa0459360 AT3G53280.1 33.766 154 98 2 2 154 298 448 2.17e-18 81.3
Msa0459360 AT3G26190.1 30.968 155 103 2 1 154 299 450 2.19e-18 81.3
Msa0459360 AT3G26220.1 31.579 152 99 2 2 151 303 451 2.62e-18 80.9
Msa0459360 AT3G26290.2 31.169 154 103 2 1 154 312 462 4.26e-18 80.5
Msa0459360 AT3G26290.1 31.169 154 103 2 1 154 299 449 4.37e-18 80.5
Msa0459360 AT3G26200.1 30.323 155 104 2 1 154 299 450 5.01e-18 80.1
Msa0459360 AT1G64900.1 34.043 141 92 1 12 151 315 455 9.01e-18 79.3
Msa0459360 AT1G58265.1 45.588 68 34 1 90 154 12 79 1.01e-16 72.8
Msa0459360 AT5G61320.1 37.500 96 60 0 53 148 341 436 1.71e-15 72.8
Msa0459360 AT3G61040.2 39.362 94 56 1 2 94 298 391 2.41e-15 72.4
Msa0459360 AT4G20240.1 32.456 114 71 3 9 119 305 415 2.94e-15 72.0
Msa0459360 AT5G42590.1 27.922 154 107 2 2 154 298 448 1.29e-14 70.5
Msa0459360 AT5G58860.1 28.481 158 102 2 1 147 301 458 2.08e-14 69.7
Msa0459360 AT2G45580.3 35.106 94 60 1 2 95 312 404 3.56e-14 68.9
Msa0459360 AT2G02580.1 25.974 154 111 1 1 154 299 449 7.89e-14 68.2
Msa0459360 AT3G53130.1 27.891 147 104 2 1 147 345 489 2.53e-13 66.6
Msa0459360 AT5G24950.1 27.338 139 96 3 12 148 307 442 3.90e-13 66.2
Msa0459360 AT3G53290.1 33.929 112 71 1 43 154 249 357 4.53e-13 65.9
Msa0459360 AT5G25900.1 26.452 155 100 4 5 154 318 463 4.85e-13 65.9
Msa0459360 AT4G00360.1 26.582 158 104 3 1 147 305 461 3.10e-12 63.5
Msa0459360 AT1G63710.1 29.747 158 97 3 1 147 303 457 7.44e-12 62.4
Msa0459360 AT5G24960.1 28.859 149 101 3 2 148 298 443 1.44e-11 61.6
Msa0459360 AT4G39490.1 25.466 161 104 3 1 147 308 466 2.20e-11 61.2
Msa0459360 AT3G25180.2 44.262 61 34 0 6 66 316 376 2.63e-11 60.8
Msa0459360 AT1G57750.1 27.027 148 99 3 1 147 307 446 3.63e-11 60.5
Msa0459360 AT2G27690.1 29.630 135 85 5 19 147 311 441 6.58e-11 59.7
Msa0459360 AT1G01600.1 26.875 160 102 4 1 147 306 463 7.35e-11 59.7

Find 39 sgRNAs with CRISPR-Local

Find 43 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATATTGTCCAATTCTTCTA+TGG 0.232328 3_3:-55839700 None:intergenic
GAAATTGAGTTTAGGAATAT+CGG 0.287102 3_3:-55839751 None:intergenic
GTTTAGGAATATCGGATTCT+TGG 0.312112 3_3:-55839743 None:intergenic
GGAGCATTGAAATCTGTTAT+TGG 0.316702 3_3:-55839810 None:intergenic
CGTTCTGGTTTGTATTTGTA+AGG 0.332396 3_3:-55839942 None:intergenic
GTCCATTCAACTGTGTTTGA+TGG 0.334166 3_3:-55839636 None:intergenic
AAGGATATGAACTTCAATTC+TGG 0.360150 3_3:-55840005 None:intergenic
TCCTAAACTCAATTTCTTGA+AGG 0.361318 3_3:+55839758 Msa0459360:CDS
CATGTATTGCTTGGAAGAAC+TGG 0.412360 3_3:+55839888 Msa0459360:CDS
GCCTTCAAGAAATTGAGTTT+AGG 0.412511 3_3:-55839759 None:intergenic
TCATTCTTAAGATGGCGTTC+TGG 0.419545 3_3:-55839957 None:intergenic
TTGCTTGGAAGAACTGGTCT+TGG 0.446617 3_3:+55839894 Msa0459360:CDS
GGCTGTCCTGGTATCATGCT+TGG 0.461036 3_3:+55840044 Msa0459360:CDS
ATCCATCAAACACAGTTGAA+TGG 0.469179 3_3:+55839634 Msa0459360:CDS
AGCAATACATGACTTCCCTT+TGG 0.470218 3_3:-55839876 None:intergenic
GAAGAATTGGACAATATAGT+TGG 0.470598 3_3:+55839705 Msa0459360:CDS
ACAATATAGTTGGAGAAGAT+AGG 0.474738 3_3:+55839715 Msa0459360:CDS
GGAAATTACTTCATACCAAA+GGG 0.475466 3_3:+55839861 Msa0459360:CDS
TCTATAAATGATACAATGGT+TGG 0.482958 3_3:+55839840 Msa0459360:CDS
ACAGGAAGGCGTGGCTGTCC+TGG 0.484218 3_3:+55840032 Msa0459360:CDS
TGCTTGGAAGAACTGGTCTT+GGG 0.487569 3_3:+55839895 Msa0459360:CDS
CCGAACCATCATTCTTAAGA+TGG 0.493621 3_3:-55839965 None:intergenic
CCATCTTAAGAATGATGGTT+CGG 0.495334 3_3:+55839965 Msa0459360:CDS
CATTGAAATCTGTTATTGGA+TGG 0.504503 3_3:-55839806 None:intergenic
AAGGGAAGTCATGTATTGCT+TGG 0.510842 3_3:+55839879 Msa0459360:CDS
GCCACGCCTTCCTGTACTAA+AGG 0.520091 3_3:-55840024 None:intergenic
AAGTTCATATCCTTTAGTAC+AGG 0.529485 3_3:+55840014 Msa0459360:CDS
GAACGCCATCTTAAGAATGA+TGG 0.531219 3_3:+55839960 Msa0459360:CDS
TGGAAATTACTTCATACCAA+AGG 0.531613 3_3:+55839860 Msa0459360:CDS
TGTATCATTTATAGAGACAT+GGG 0.548159 3_3:-55839832 None:intergenic
TTGTATCATTTATAGAGACA+TGG 0.568480 3_3:-55839833 None:intergenic
TCCTTTAGTACAGGAAGGCG+TGG 0.599257 3_3:+55840023 Msa0459360:CDS
TGTCTCTATAAATGATACAA+TGG 0.599430 3_3:+55839836 Msa0459360:CDS
TGAAATCTGTTATTGGATGG+AGG 0.605859 3_3:-55839803 None:intergenic
TCATATCCTTTAGTACAGGA+AGG 0.608298 3_3:+55840018 Msa0459360:CDS
TATAGTTGGAGAAGATAGGA+TGG 0.629916 3_3:+55839719 Msa0459360:CDS
AAACACAGTTGAATGGACAT+TGG 0.637511 3_3:+55839641 Msa0459360:CDS
GTAGAACCAAGCATGATACC+AGG 0.662662 3_3:-55840050 None:intergenic
GTATCATTTATAGAGACATG+GGG 0.685452 3_3:-55839831 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! TATATTGTCCAATTCTTCTA+TGG - chr3_3:55839703-55839722 None:intergenic 25.0%
! GAAATTGAGTTTAGGAATAT+CGG - chr3_3:55839754-55839773 None:intergenic 25.0%
! TGTATCATTTATAGAGACAT+GGG - chr3_3:55839835-55839854 None:intergenic 25.0%
! TTGTATCATTTATAGAGACA+TGG - chr3_3:55839836-55839855 None:intergenic 25.0%
! TGTCTCTATAAATGATACAA+TGG + chr3_3:55839836-55839855 Msa0459360:CDS 25.0%
! TCTATAAATGATACAATGGT+TGG + chr3_3:55839840-55839859 Msa0459360:CDS 25.0%
!! TAAGGTTCATTCCAAATTTT+TGG - chr3_3:55839927-55839946 None:intergenic 25.0%
TGAAAAAGCCATAGAAGAAT+TGG + chr3_3:55839692-55839711 Msa0459360:CDS 30.0%
GAAGAATTGGACAATATAGT+TGG + chr3_3:55839705-55839724 Msa0459360:CDS 30.0%
ACAATATAGTTGGAGAAGAT+AGG + chr3_3:55839715-55839734 Msa0459360:CDS 30.0%
TCCTAAACTCAATTTCTTGA+AGG + chr3_3:55839758-55839777 Msa0459360:CDS 30.0%
CATTGAAATCTGTTATTGGA+TGG - chr3_3:55839809-55839828 None:intergenic 30.0%
GTATCATTTATAGAGACATG+GGG - chr3_3:55839834-55839853 None:intergenic 30.0%
TGGAAATTACTTCATACCAA+AGG + chr3_3:55839860-55839879 Msa0459360:CDS 30.0%
GGAAATTACTTCATACCAAA+GGG + chr3_3:55839861-55839880 Msa0459360:CDS 30.0%
TTGGGAGAAATCCAAAAATT+TGG + chr3_3:55839913-55839932 Msa0459360:CDS 30.0%
AAGGATATGAACTTCAATTC+TGG - chr3_3:55840008-55840027 None:intergenic 30.0%
AAGTTCATATCCTTTAGTAC+AGG + chr3_3:55840014-55840033 Msa0459360:CDS 30.0%
ATCCATCAAACACAGTTGAA+TGG + chr3_3:55839634-55839653 Msa0459360:CDS 35.0%
AAACACAGTTGAATGGACAT+TGG + chr3_3:55839641-55839660 Msa0459360:CDS 35.0%
!!! ATGGCTTTTTCAAAGAGTTC+AGG - chr3_3:55839684-55839703 None:intergenic 35.0%
TATAGTTGGAGAAGATAGGA+TGG + chr3_3:55839719-55839738 Msa0459360:CDS 35.0%
GTTTAGGAATATCGGATTCT+TGG - chr3_3:55839746-55839765 None:intergenic 35.0%
GCCTTCAAGAAATTGAGTTT+AGG - chr3_3:55839762-55839781 None:intergenic 35.0%
TGAAATCTGTTATTGGATGG+AGG - chr3_3:55839806-55839825 None:intergenic 35.0%
!! GGAGCATTGAAATCTGTTAT+TGG - chr3_3:55839813-55839832 None:intergenic 35.0%
!! CGTTCTGGTTTGTATTTGTA+AGG - chr3_3:55839945-55839964 None:intergenic 35.0%
CCATCTTAAGAATGATGGTT+CGG + chr3_3:55839965-55839984 Msa0459360:CDS 35.0%
TCATATCCTTTAGTACAGGA+AGG + chr3_3:55840018-55840037 Msa0459360:CDS 35.0%
GTCCATTCAACTGTGTTTGA+TGG - chr3_3:55839639-55839658 None:intergenic 40.0%
AGCAATACATGACTTCCCTT+TGG - chr3_3:55839879-55839898 None:intergenic 40.0%
AAGGGAAGTCATGTATTGCT+TGG + chr3_3:55839879-55839898 Msa0459360:CDS 40.0%
CATGTATTGCTTGGAAGAAC+TGG + chr3_3:55839888-55839907 Msa0459360:CDS 40.0%
TCATTCTTAAGATGGCGTTC+TGG - chr3_3:55839960-55839979 None:intergenic 40.0%
GAACGCCATCTTAAGAATGA+TGG + chr3_3:55839960-55839979 Msa0459360:CDS 40.0%
CCGAACCATCATTCTTAAGA+TGG - chr3_3:55839968-55839987 None:intergenic 40.0%
! TTGCTTGGAAGAACTGGTCT+TGG + chr3_3:55839894-55839913 Msa0459360:CDS 45.0%
!! TGCTTGGAAGAACTGGTCTT+GGG + chr3_3:55839895-55839914 Msa0459360:CDS 45.0%
GTAGAACCAAGCATGATACC+AGG - chr3_3:55840053-55840072 None:intergenic 45.0%
TCCTTTAGTACAGGAAGGCG+TGG + chr3_3:55840023-55840042 Msa0459360:CDS 50.0%
GCCACGCCTTCCTGTACTAA+AGG - chr3_3:55840027-55840046 None:intergenic 55.0%
GGCTGTCCTGGTATCATGCT+TGG + chr3_3:55840044-55840063 Msa0459360:CDS 55.0%
! ACAGGAAGGCGTGGCTGTCC+TGG + chr3_3:55840032-55840051 Msa0459360:CDS 65.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 55839615 55840079 55839615 ID=Msa0459360;Name=Msa0459360
chr3_3 mRNA 55839615 55840079 55839615 ID=Msa0459360-mRNA-1;Parent=Msa0459360;Name=Msa0459360-mRNA-1;_AED=0.43;_eAED=0.43;_QI=0|-1|0|1|-1|1|1|0|154
chr3_3 exon 55839615 55840079 55839615 ID=Msa0459360-mRNA-1:exon:11083;Parent=Msa0459360-mRNA-1
chr3_3 CDS 55839615 55840079 55839615 ID=Msa0459360-mRNA-1:cds;Parent=Msa0459360-mRNA-1
Gene Sequence

>Msa0459360

ATGTTGGCATTCGTAGACAATCCATCAAACACAGTTGAATGGACATTGGCTGAAATGTTAAATCAACCTGAACTCTTTGAAAAAGCCATAGAAGAATTGGACAATATAGTTGGAGAAGATAGGATGGTCCAAGAATCCGATATTCCTAAACTCAATTTCTTGAAGGCTTGTGCAAGAGAAGCGTTTCGCCTCCATCCAATAACAGATTTCAATGCTCCCCATGTCTCTATAAATGATACAATGGTTGGAAATTACTTCATACCAAAGGGAAGTCATGTATTGCTTGGAAGAACTGGTCTTGGGAGAAATCCAAAAATTTGGAATGAACCTTACAAATACAAACCAGAACGCCATCTTAAGAATGATGGTTCGGATATAGCGTTGACAGAGCCAGAATTGAAGTTCATATCCTTTAGTACAGGAAGGCGTGGCTGTCCTGGTATCATGCTTGGTTCTACAATATAA
Protein sequence

>Msa0459360

MLAFVDNPSNTVEWTLAEMLNQPELFEKAIEELDNIVGEDRMVQESDIPKLNFLKACAREAFRLHPITDFNAPHVSINDTMVGNYFIPKGSHVLLGRTGLGRNPKIWNEPYKYKPERHLKNDGSDIALTEPELKFISFSTGRRGCPGIMLGSTI*