AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0460670

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0460670 MtrunA17_Chr3g0109801 97.552 286 7 0 1 286 1 286 0.0 579
Msa0460670 MtrunA17_Chr5g0433841 72.340 235 57 4 50 284 38 264 2.88e-124 355
Msa0460670 MtrunA17_Chr4g0021561 55.508 236 92 6 52 284 31 256 1.21e-85 256
Msa0460670 MtrunA17_Chr5g0432611 53.165 237 102 5 48 284 24 251 2.97e-83 250
Msa0460670 MtrunA17_Chr2g0328261 53.419 234 100 5 53 285 34 259 5.90e-81 245
Msa0460670 MtrunA17_Chr3g0128801 52.155 232 102 5 53 284 31 253 9.86e-81 244
Msa0460670 MtrunA17_Chr5g0435311 52.991 234 101 5 53 285 82 307 1.57e-80 245
Msa0460670 MtrunA17_Chr5g0417701 52.361 233 102 5 53 285 25 248 4.24e-80 242
Msa0460670 MtrunA17_Chr4g0042521 53.017 232 100 5 53 284 25 247 1.64e-79 241
Msa0460670 MtrunA17_Chr7g0238681 52.137 234 103 5 53 285 32 257 1.86e-79 241
Msa0460670 MtrunA17_Chr3g0128791 51.724 232 103 5 53 284 31 253 3.01e-79 240
Msa0460670 MtrunA17_Chr3g0107311 52.340 235 103 5 50 284 29 254 4.40e-79 240
Msa0460670 MtrunA17_Chr3g0092071 51.293 232 104 5 53 284 25 247 2.43e-78 238
Msa0460670 MtrunA17_Chr3g0107291 51.055 237 107 5 48 284 33 260 1.25e-77 236
Msa0460670 MtrunA17_Chr4g0031621 53.191 235 101 5 52 285 31 257 5.40e-75 229
Msa0460670 MtrunA17_Chr7g0217661 48.305 236 105 5 50 285 23 241 1.09e-74 228
Msa0460670 MtrunA17_Chr8g0360041 48.291 234 106 6 51 281 29 250 1.79e-71 220
Msa0460670 MtrunA17_Chr7g0218751 47.436 234 108 6 52 282 27 248 3.81e-70 217
Msa0460670 MtrunA17_Chr1g0157061 45.259 232 122 3 51 282 12 238 1.45e-69 215
Msa0460670 MtrunA17_Chr1g0193631 46.957 230 115 5 51 279 28 251 1.45e-69 216
Msa0460670 MtrunA17_Chr4g0069711 43.416 281 137 9 15 283 13 283 8.74e-69 214
Msa0460670 MtrunA17_Chr7g0271001 46.725 229 115 5 53 280 27 249 2.17e-67 210
Msa0460670 MtrunA17_Chr7g0218761 46.698 212 103 4 72 282 7 209 2.39e-66 206
Msa0460670 MtrunA17_Chr8g0360721 47.143 210 101 4 72 280 16 216 2.51e-66 206
Msa0460670 MtrunA17_Chr6g0453341 50.862 232 97 5 53 284 38 252 3.26e-66 207
Msa0460670 MtrunA17_Chr7g0218741 44.872 234 117 6 52 283 28 251 3.13e-64 202
Msa0460670 MtrunA17_Chr5g0398271 44.206 233 121 5 51 282 35 259 2.05e-61 195
Msa0460670 MtrunA17_Chr4g0057091 41.404 285 126 10 3 280 6 256 3.61e-61 194
Msa0460670 MtrunA17_Chr2g0324181 67.327 101 33 0 184 284 17 117 2.18e-44 146
Msa0460670 MtrunA17_Chr4g0022841 49.565 115 58 0 167 281 2 116 4.32e-33 117
Msa0460670 MtrunA17_Chr2g0324191 47.761 134 61 5 52 184 27 152 1.37e-31 114
Msa0460670 MtrunA17_Chr8g0359971 54.667 75 33 1 206 279 2 76 4.85e-21 85.1
Msa0460670 MtrunA17_Chr4g0022851 45.455 110 43 6 51 157 30 125 7.59e-20 83.2
Msa0460670 MtrunA17_Chr4g0012801 30.165 242 131 10 53 280 42 259 1.77e-18 83.2
Msa0460670 MtrunA17_Chr8g0359981 43.956 91 37 4 97 184 2 81 3.03e-17 75.9
Msa0460670 MtrunA17_Chr2g0324221 26.230 244 147 8 51 282 33 255 1.51e-16 77.4
Msa0460670 MtrunA17_Chr4g0021641 28.807 243 140 9 52 282 40 261 2.27e-15 74.3
Msa0460670 MtrunA17_Chr7g0231221 30.252 238 129 11 58 279 53 269 4.02e-15 73.6
Msa0460670 MtrunA17_Chr2g0324201 26.337 243 146 9 52 282 32 253 1.57e-14 71.6
Msa0460670 MtrunA17_Chr4g0055561 27.004 237 141 12 55 280 30 245 7.32e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0460670 AT3G03220.1 68.511 235 66 4 52 286 39 265 5.50e-118 339
Msa0460670 AT5G56320.1 50.847 236 107 5 51 286 27 253 5.33e-81 245
Msa0460670 AT5G56320.2 50.847 236 107 5 51 286 27 253 5.33e-81 245
Msa0460670 AT2G39700.1 53.846 234 99 5 53 285 31 256 1.06e-80 244
Msa0460670 AT5G56320.3 50.847 236 107 5 51 286 27 253 1.34e-80 246
Msa0460670 AT2G37640.1 52.564 234 102 5 53 285 36 261 1.69e-80 244
Msa0460670 AT3G55500.1 52.766 235 102 5 52 285 33 259 1.84e-80 244
Msa0460670 AT5G02260.1 50.855 234 106 5 53 285 32 257 4.30e-80 243
Msa0460670 AT2G03090.1 52.790 233 101 5 53 285 30 253 6.59e-80 242
Msa0460670 AT1G69530.2 53.219 233 100 5 53 285 27 250 8.20e-80 242
Msa0460670 AT1G69530.1 53.219 233 100 5 53 285 27 250 8.20e-80 242
Msa0460670 AT1G69530.3 53.744 227 96 5 53 279 27 244 1.20e-77 237
Msa0460670 AT2G40610.1 51.073 233 104 6 53 284 30 253 4.82e-77 235
Msa0460670 AT3G29030.1 50.644 233 99 4 53 285 38 254 6.96e-77 234
Msa0460670 AT2G37640.2 53.241 216 93 4 71 285 28 236 4.61e-76 232
Msa0460670 AT5G05290.1 52.361 233 101 7 53 284 32 255 4.88e-76 233
Msa0460670 AT2G28950.1 51.282 234 105 5 53 285 31 256 5.63e-73 225
Msa0460670 AT1G26770.1 49.794 243 113 5 43 285 16 249 6.33e-73 224
Msa0460670 AT1G26770.2 49.794 243 113 5 43 285 26 259 7.22e-73 224
Msa0460670 AT4G38210.1 50.633 237 108 5 52 286 27 256 1.80e-70 218
Msa0460670 AT1G20190.1 47.788 226 112 4 55 280 28 247 1.11e-69 216
Msa0460670 AT4G01630.1 47.660 235 116 5 47 280 22 250 2.31e-69 215
Msa0460670 AT5G39280.1 43.956 273 138 6 12 282 13 272 6.34e-69 215
Msa0460670 AT5G39270.1 43.158 285 148 8 1 282 3 276 9.00e-69 215
Msa0460670 AT5G39300.1 42.456 285 147 8 1 282 3 273 2.30e-68 214
Msa0460670 AT5G39290.1 42.105 285 151 8 1 282 3 276 2.18e-67 211
Msa0460670 AT1G69530.4 45.923 233 87 6 53 285 27 220 1.23e-62 197
Msa0460670 AT3G15370.1 46.639 238 108 8 53 284 27 251 2.38e-62 197
Msa0460670 AT1G12560.1 46.522 230 111 6 53 280 37 256 6.17e-62 197
Msa0460670 AT1G62980.1 46.352 233 112 7 53 282 31 253 4.33e-61 194
Msa0460670 AT1G20190.2 47.895 190 95 2 91 280 3 188 8.14e-61 191
Msa0460670 AT1G69530.5 52.381 189 81 5 53 241 27 206 8.52e-61 193
Msa0460670 AT5G39310.1 41.699 259 138 8 26 282 62 309 6.12e-60 193
Msa0460670 AT3G15370.2 41.573 267 109 8 53 284 27 281 1.02e-57 186
Msa0460670 AT5G39260.1 40.948 232 122 4 51 282 43 259 8.38e-54 176
Msa0460670 AT4G28250.1 27.891 294 153 12 6 282 6 257 5.47e-18 82.0
Msa0460670 AT1G65680.1 27.778 252 146 10 44 280 38 268 5.69e-15 73.6
Msa0460670 AT4G17030.1 28.629 248 131 12 51 280 25 244 2.45e-11 63.2

Find 99 sgRNAs with CRISPR-Local

Find 285 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACTAAAATTTAAGATTAAT+TGG 0.145079 3_3:+58188731 None:intergenic
TGGTGGTTTATGTGATTAAT+TGG 0.256501 3_3:+58188685 None:intergenic
GATAAGCGGTGGTGTGTTTC+GGG 0.263067 3_3:-58189877 Msa0460670:CDS
GATTCCTATGGGTCGGAATT+GGG 0.268081 3_3:-58189112 Msa0460670:CDS
TGATAAGCGGTGGTGTGTTT+CGG 0.270455 3_3:-58189878 Msa0460670:CDS
GGATTCCTATGGGTCGGAAT+TGG 0.278807 3_3:-58189113 Msa0460670:CDS
TGTCCAAAGGTCCAATTCTT+AGG 0.278918 3_3:+58188991 None:intergenic
GGAATGAGGTTTACAATTAC+AGG 0.280899 3_3:-58189225 Msa0460670:CDS
AGGTTTACAATTACAGGTTC+TGG 0.308578 3_3:-58189219 Msa0460670:CDS
AGGCCATAGTATTGGTTAGA+AGG 0.339047 3_3:-58188808 Msa0460670:three_prime_UTR
TAGGTAGAAGAGGGAGATGA+AGG 0.341530 3_3:+58190108 None:intergenic
CCACCACTTGCGATAGGCTT+AGG 0.346402 3_3:-58188668 Msa0460670:three_prime_UTR
CATTGTTGGTGTGAAAGTTA+AGG 0.357220 3_3:-58189151 Msa0460670:CDS
AAAGTTAAGGGTTCAAGAAC+TGG 0.378754 3_3:-58189138 Msa0460670:CDS
ATTGTTGGTGTGAAAGTTAA+GGG 0.386944 3_3:-58189150 Msa0460670:CDS
AAACCAACCTCTTTCATTTG+AGG 0.394684 3_3:-58189058 Msa0460670:CDS
ACAATGTAGCTCCTAAGAAT+TGG 0.397079 3_3:-58189002 Msa0460670:CDS
GTCGGAATTGGGGTCAAATC+TGG 0.397366 3_3:-58189101 Msa0460670:CDS
AAGAACTGGTTGGATTCCTA+TGG 0.401811 3_3:-58189124 Msa0460670:CDS
ATCTTCTCAAAAGCCTCAAC+AGG 0.412790 3_3:+58189748 None:intergenic
AAACCTTCTAACCAATACTA+TGG 0.417043 3_3:+58188805 None:intergenic
TGGAGAAGAGTAATGAGAAT+TGG 0.418406 3_3:+58190164 None:intergenic
ACACACCACCGCTTATCAAA+TGG 0.425332 3_3:+58189883 None:intergenic
ACCTTTGGACAAACCTTTGA+AGG 0.427912 3_3:-58188979 Msa0460670:CDS
AGGTAGAAGAGGGAGATGAA+GGG 0.440828 3_3:+58190109 None:intergenic
GCTCCTAAGAATTGGACCTT+TGG 0.446042 3_3:-58188994 Msa0460670:CDS
TGCCCCGTCTACCCCGTCTC+TGG 0.449614 3_3:+58190035 None:intergenic
CTTGAATTGCCTGCCTTCAA+AGG 0.451587 3_3:+58188966 None:intergenic
TGGCCTAAAATTCAGAAAAC+AGG 0.452479 3_3:+58188825 None:intergenic
GGAAGCACAAAATGCTGCTT+AGG 0.454654 3_3:+58189769 None:intergenic
TCAGCATCAAACCCATAATT+CGG 0.457609 3_3:+58189817 None:intergenic
AATGGTGTGGCTGGTGGTGA+TGG 0.460562 3_3:+58190144 None:intergenic
GGTAGAAGAGGGAGATGAAG+GGG 0.464279 3_3:+58190110 None:intergenic
CACCACTTGCGATAGGCTTA+GGG 0.469142 3_3:-58188667 None:intergenic
AGAAGATTGCTATTTGGAAA+GGG 0.472186 3_3:-58189732 Msa0460670:CDS
CTAATTTATTGCAAAACTTG+TGG 0.482073 3_3:+58188891 None:intergenic
ACACCAGAGACGGGGTAGAC+GGG 0.482293 3_3:-58190038 Msa0460670:CDS
GATTCATTGAATGGTGTGGC+TGG 0.483338 3_3:+58190135 None:intergenic
GAGAAGATTGCTATTTGGAA+AGG 0.486919 3_3:-58189733 Msa0460670:CDS
GGCGTGGGCGGACAGCCATT+CGG 0.493693 3_3:+58190083 None:intergenic
GTAGACGGGGCATGTGGCTA+CGG 0.500841 3_3:-58190024 Msa0460670:CDS
CTCACTGAGAGCAGCAGCAC+CGG 0.503294 3_3:+58189972 None:intergenic
CAAAACTTGTGGAAGAAGAA+TGG 0.505628 3_3:+58188902 None:intergenic
GACACTCACAGAGACGGTTA+TGG 0.508629 3_3:-58190000 Msa0460670:CDS
GACACCAGAGACGGGGTAGA+CGG 0.508905 3_3:-58190039 Msa0460670:CDS
CCATTCGGAGTAGGTAGAAG+AGG 0.517738 3_3:+58190098 None:intergenic
ATTCCTATGGGTCGGAATTG+GGG 0.518101 3_3:-58189111 Msa0460670:CDS
TTGGACAAACCTTTGAAGGC+AGG 0.523684 3_3:-58188975 Msa0460670:CDS
GTAGAAGAGGGAGATGAAGG+GGG 0.523846 3_3:+58190111 None:intergenic
CTAGTGACCTCAAATGAAAG+AGG 0.524141 3_3:+58189051 None:intergenic
GGGTTTGATGCTGAGAGTGA+TGG 0.529869 3_3:-58189808 Msa0460670:CDS
TTAAGGGTTCAAGAACTGGT+TGG 0.531328 3_3:-58189134 Msa0460670:CDS
GCCTTCAAAGGTTTGTCCAA+AGG 0.532281 3_3:+58188978 None:intergenic
GTGCTGATCAGTAACGTAGC+TGG 0.533927 3_3:-58189183 Msa0460670:CDS
GGATAAAGTGCATAAGAGAA+GGG 0.537382 3_3:-58189248 Msa0460670:CDS
TTTGAGGTCACTAGTAGTGA+TGG 0.546855 3_3:-58189042 Msa0460670:CDS
TGACCTCAAATGAAAGAGGT+TGG 0.547291 3_3:+58189055 None:intergenic
AGCACAAAATGCTGCTTAGG+AGG 0.548344 3_3:+58189772 None:intergenic
AAGATTGCTATTTGGAAAGG+GGG 0.549086 3_3:-58189730 Msa0460670:CDS
TCTCTGATGACACCAGAGAC+GGG 0.549424 3_3:-58190047 Msa0460670:CDS
AGGATAAAGTGCATAAGAGA+AGG 0.549801 3_3:-58189249 Msa0460670:CDS
GACGGGGTAGACGGGGCATG+TGG 0.556137 3_3:-58190030 Msa0460670:CDS
ACATGCCTGTGCAGTATCGC+AGG 0.560459 3_3:-58189705 Msa0460670:intron
GATAAAGTGCATAAGAGAAG+GGG 0.564280 3_3:-58189247 Msa0460670:CDS
AGAACTGGTTGGATTCCTAT+GGG 0.564864 3_3:-58189123 Msa0460670:CDS
TGACCCCAATTCCGACCCAT+AGG 0.566300 3_3:+58189108 None:intergenic
GTCTCTGGTGTCATCAGAGA+CGG 0.566300 3_3:+58190050 None:intergenic
GAAGATTGCTATTTGGAAAG+GGG 0.570162 3_3:-58189731 Msa0460670:CDS
CTTTGAGCTACGCTGTCTTG+AGG 0.574278 3_3:-58189914 Msa0460670:CDS
ATCAGAGACGGAGTAGTAAG+TGG 0.578862 3_3:+58190062 None:intergenic
GACGGAGTAGTAAGTGGCGT+GGG 0.582001 3_3:+58190068 None:intergenic
GTCTCTGATGACACCAGAGA+CGG 0.585915 3_3:-58190048 Msa0460670:CDS
TTTGATGCTGAGAGTGATGG+TGG 0.587083 3_3:-58189805 Msa0460670:CDS
GAGTACCTGCGATACTGCAC+AGG 0.587340 3_3:+58189700 None:intergenic
ATCAGTAACGTAGCTGGCAT+AGG 0.589040 3_3:-58189177 Msa0460670:CDS
TGAGCTACGCTGTCTTGAGG+AGG 0.590052 3_3:-58189911 Msa0460670:CDS
TTCGTGCGTGGTCAGATCTG+TGG 0.593108 3_3:-58189943 Msa0460670:CDS
CACCAGAGACGGGGTAGACG+GGG 0.594475 3_3:-58190037 Msa0460670:CDS
CTGGTTGGATTCCTATGGGT+CGG 0.595180 3_3:-58189119 Msa0460670:CDS
CATAAACCACCACTTGCGAT+AGG 0.600113 3_3:-58188674 Msa0460670:three_prime_UTR
CATTCGGAGTAGGTAGAAGA+GGG 0.600466 3_3:+58190099 None:intergenic
ATGTTCCATTTGATAAGCGG+TGG 0.601737 3_3:-58189888 Msa0460670:CDS
AGAGACGGTTATGGCATCAC+CGG 0.603902 3_3:-58189991 Msa0460670:CDS
AGTGAGACTCTCTTCGTGCG+TGG 0.604364 3_3:-58189955 Msa0460670:CDS
TACGGTGACACTCACAGAGA+CGG 0.610587 3_3:-58190006 Msa0460670:CDS
AACCCTAAGCCTATCGCAAG+TGG 0.613481 3_3:+58188665 None:intergenic
CCTCTTCTACCTACTCCGAA+TGG 0.615452 3_3:-58190098 Msa0460670:CDS
GCTGGCATAGGAGACATTGT+TGG 0.615732 3_3:-58189165 Msa0460670:CDS
AAATAGAATAGTTAGTTGCA+TGG 0.617272 3_3:+58190194 None:intergenic
AGGATGTTCCATTTGATAAG+CGG 0.617810 3_3:-58189891 Msa0460670:CDS
GAAGAGTAATGAGAATTGGA+TGG 0.620761 3_3:+58190168 None:intergenic
GGAGTAGTAAGTGGCGTGGG+CGG 0.626255 3_3:+58190071 None:intergenic
CTCTGATGACACCAGAGACG+GGG 0.637067 3_3:-58190046 Msa0460670:CDS
AGACGGAGTAGTAAGTGGCG+TGG 0.637689 3_3:+58190067 None:intergenic
GGCGGACAGCCATTCGGAGT+AGG 0.646738 3_3:+58190089 None:intergenic
GGGAGATTCATTGAATGGTG+TGG 0.648437 3_3:+58190131 None:intergenic
CCTAAGCCTATCGCAAGTGG+TGG 0.656859 3_3:+58188668 None:intergenic
ATAAAGTGCATAAGAGAAGG+GGG 0.666182 3_3:-58189246 Msa0460670:CDS
TCATTGAATGGTGTGGCTGG+TGG 0.668490 3_3:+58190138 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AACTAAAATTTAAGATTAAT+TGG + chr3_3:58190343-58190362 None:intergenic 10.0%
!!! TAAATTTTAGTTTTTGTTAA+CGG - chr3_3:58190351-58190370 Msa0460670:five_prime_UTR 10.0%
!!! AACTAAAATTTAAGATTAAT+TGG + chr3_3:58190343-58190362 None:intergenic 10.0%
!!! TAAATTTTAGTTTTTGTTAA+CGG - chr3_3:58190351-58190370 Msa0460670:five_prime_UTR 10.0%
!! ATTTATAATGTTCATGATTT+AGG + chr3_3:58189429-58189448 None:intergenic 15.0%
!! TAAAGTATAACATAAGTTAA+TGG + chr3_3:58189666-58189685 None:intergenic 15.0%
!!! AAATCGTTTTAAAAAGATAA+AGG - chr3_3:58189706-58189725 Msa0460670:CDS 15.0%
!!! AAATTTTAGTTTTTGTTAAC+GGG - chr3_3:58190352-58190371 Msa0460670:five_prime_UTR 15.0%
!! ATTTATAATGTTCATGATTT+AGG + chr3_3:58189429-58189448 None:intergenic 15.0%
!! TAAAGTATAACATAAGTTAA+TGG + chr3_3:58189666-58189685 None:intergenic 15.0%
!!! AAATCGTTTTAAAAAGATAA+AGG - chr3_3:58189706-58189725 Msa0460670:CDS 15.0%
!!! AAATTTTAGTTTTTGTTAAC+GGG - chr3_3:58190352-58190371 Msa0460670:five_prime_UTR 15.0%
!! CAATTATTGACATACAAATA+AGG + chr3_3:58189511-58189530 None:intergenic 20.0%
!! ATTTGTATGTCAATAATTGA+AGG - chr3_3:58189512-58189531 Msa0460670:intron 20.0%
!! ATGTTATACTTTATGACTAA+AGG - chr3_3:58189673-58189692 Msa0460670:intron 20.0%
!! AAACAAACTAAATCATTCTA+CGG + chr3_3:58189778-58189797 None:intergenic 20.0%
!! TTGTAATATTTATTTGTGCT+TGG - chr3_3:58189796-58189815 Msa0460670:CDS 20.0%
!! CAATTATTGACATACAAATA+AGG + chr3_3:58189511-58189530 None:intergenic 20.0%
!! ATTTGTATGTCAATAATTGA+AGG - chr3_3:58189512-58189531 Msa0460670:intron 20.0%
!! ATGTTATACTTTATGACTAA+AGG - chr3_3:58189673-58189692 Msa0460670:intron 20.0%
!! AAACAAACTAAATCATTCTA+CGG + chr3_3:58189778-58189797 None:intergenic 20.0%
!! TTGTAATATTTATTTGTGCT+TGG - chr3_3:58189796-58189815 Msa0460670:CDS 20.0%
!!! GTTTGTTTTTTCGTAAGTTT+TGG + chr3_3:58188813-58188832 None:intergenic 25.0%
! TAAAAAGAGATTAACACACA+AGG + chr3_3:58188849-58188868 None:intergenic 25.0%
! AAATAGAATAGTTAGTTGCA+TGG + chr3_3:58188880-58188899 None:intergenic 25.0%
!!! GCATTTTTGGTTAAACATAA+AGG - chr3_3:58189737-58189756 Msa0460670:CDS 25.0%
! ATTCTACGGAAAGATATATT+TGG + chr3_3:58189764-58189783 None:intergenic 25.0%
! CTAATTTATTGCAAAACTTG+TGG + chr3_3:58190183-58190202 None:intergenic 25.0%
!! CACAAGTTTTGCAATAAATT+AGG - chr3_3:58190181-58190200 Msa0460670:CDS 25.0%
!!! GTTTGTTTTTTCGTAAGTTT+TGG + chr3_3:58188813-58188832 None:intergenic 25.0%
! TAAAAAGAGATTAACACACA+AGG + chr3_3:58188849-58188868 None:intergenic 25.0%
! AAATAGAATAGTTAGTTGCA+TGG + chr3_3:58188880-58188899 None:intergenic 25.0%
!!! GCATTTTTGGTTAAACATAA+AGG - chr3_3:58189737-58189756 Msa0460670:CDS 25.0%
! ATTCTACGGAAAGATATATT+TGG + chr3_3:58189764-58189783 None:intergenic 25.0%
! CTAATTTATTGCAAAACTTG+TGG + chr3_3:58190183-58190202 None:intergenic 25.0%
!! CACAAGTTTTGCAATAAATT+AGG - chr3_3:58190181-58190200 Msa0460670:CDS 25.0%
!!! TGTTTTTTCGTAAGTTTTGG+AGG + chr3_3:58188810-58188829 None:intergenic 30.0%
!! CTTTTGAGAAGATTGCTATT+TGG - chr3_3:58189333-58189352 Msa0460670:intron 30.0%
!! AGAAGATTGCTATTTGGAAA+GGG - chr3_3:58189339-58189358 Msa0460670:intron 30.0%
TAGGAAGAAAAACTAACAAG+AGG + chr3_3:58189410-58189429 None:intergenic 30.0%
AAATAAGGCTTTGCAAAACA+TGG + chr3_3:58189496-58189515 None:intergenic 30.0%
! CCAGACTTTTTAAATAGAGA+AGG + chr3_3:58189544-58189563 None:intergenic 30.0%
CCTTCTCTATTTAAAAAGTC+TGG - chr3_3:58189541-58189560 Msa0460670:intron 30.0%
AACATGAGTAGATATATCGT+AGG - chr3_3:58189568-58189587 Msa0460670:intron 30.0%
! GTTTAACCAAAAATGCGTTT+TGG + chr3_3:58189733-58189752 None:intergenic 30.0%
ATTGTTGGTGTGAAAGTTAA+GGG - chr3_3:58189921-58189940 Msa0460670:CDS 30.0%
!!! ATGGTCTTTTGAAACAAGTT+AGG + chr3_3:58190153-58190172 None:intergenic 30.0%
! TGTCCTGTTTTCTGAATTTT+AGG - chr3_3:58190243-58190262 Msa0460670:exon 30.0%
! TGAATTTTAGGCCATAGTAT+TGG - chr3_3:58190255-58190274 Msa0460670:exon 30.0%
AAACCTTCTAACCAATACTA+TGG + chr3_3:58190269-58190288 None:intergenic 30.0%
! GGTTAGAAGGTTTTTCTTTT+TGG - chr3_3:58190276-58190295 Msa0460670:five_prime_UTR 30.0%
TGGTGGTTTATGTGATTAAT+TGG + chr3_3:58190389-58190408 None:intergenic 30.0%
!!! TGTTTTTTCGTAAGTTTTGG+AGG + chr3_3:58188810-58188829 None:intergenic 30.0%
!! CTTTTGAGAAGATTGCTATT+TGG - chr3_3:58189333-58189352 Msa0460670:intron 30.0%
!! AGAAGATTGCTATTTGGAAA+GGG - chr3_3:58189339-58189358 Msa0460670:intron 30.0%
TAGGAAGAAAAACTAACAAG+AGG + chr3_3:58189410-58189429 None:intergenic 30.0%
AAATAAGGCTTTGCAAAACA+TGG + chr3_3:58189496-58189515 None:intergenic 30.0%
! CCAGACTTTTTAAATAGAGA+AGG + chr3_3:58189544-58189563 None:intergenic 30.0%
CCTTCTCTATTTAAAAAGTC+TGG - chr3_3:58189541-58189560 Msa0460670:intron 30.0%
AACATGAGTAGATATATCGT+AGG - chr3_3:58189568-58189587 Msa0460670:intron 30.0%
! GTTTAACCAAAAATGCGTTT+TGG + chr3_3:58189733-58189752 None:intergenic 30.0%
ATTGTTGGTGTGAAAGTTAA+GGG - chr3_3:58189921-58189940 Msa0460670:CDS 30.0%
!!! ATGGTCTTTTGAAACAAGTT+AGG + chr3_3:58190153-58190172 None:intergenic 30.0%
! TGTCCTGTTTTCTGAATTTT+AGG - chr3_3:58190243-58190262 Msa0460670:exon 30.0%
! TGAATTTTAGGCCATAGTAT+TGG - chr3_3:58190255-58190274 Msa0460670:exon 30.0%
AAACCTTCTAACCAATACTA+TGG + chr3_3:58190269-58190288 None:intergenic 30.0%
! GGTTAGAAGGTTTTTCTTTT+TGG - chr3_3:58190276-58190295 Msa0460670:five_prime_UTR 30.0%
TGGTGGTTTATGTGATTAAT+TGG + chr3_3:58190389-58190408 None:intergenic 30.0%
GAAGAGTAATGAGAATTGGA+TGG + chr3_3:58188906-58188925 None:intergenic 35.0%
TGGAGAAGAGTAATGAGAAT+TGG + chr3_3:58188910-58188929 None:intergenic 35.0%
AGGATGTTCCATTTGATAAG+CGG - chr3_3:58189180-58189199 Msa0460670:CDS 35.0%
! AGTTTTTGTGCTCCGAATTA+TGG - chr3_3:58189242-58189261 Msa0460670:CDS 35.0%
! GTTTTTGTGCTCCGAATTAT+GGG - chr3_3:58189243-58189262 Msa0460670:CDS 35.0%
TCAGCATCAAACCCATAATT+CGG + chr3_3:58189257-58189276 None:intergenic 35.0%
!! GAGAAGATTGCTATTTGGAA+AGG - chr3_3:58189338-58189357 Msa0460670:intron 35.0%
!! GAAGATTGCTATTTGGAAAG+GGG - chr3_3:58189340-58189359 Msa0460670:intron 35.0%
!! AAGATTGCTATTTGGAAAGG+GGG - chr3_3:58189341-58189360 Msa0460670:intron 35.0%
TGAATCTATGTGCGACAATT+TGG - chr3_3:58189448-58189467 Msa0460670:intron 35.0%
GAATCTATGTGCGACAATTT+GGG - chr3_3:58189449-58189468 Msa0460670:intron 35.0%
AGATATATCGTAGGTCATGT+AGG - chr3_3:58189577-58189596 Msa0460670:intron 35.0%
GTTAATGGAAGTTTAACACG+TGG + chr3_3:58189651-58189670 None:intergenic 35.0%
! AAAGGACCAAAACGCATTTT+TGG - chr3_3:58189724-58189743 Msa0460670:CDS 35.0%
TATTTATTTGTGCTTGGAGC+AGG - chr3_3:58189802-58189821 Msa0460670:CDS 35.0%
AGGATAAAGTGCATAAGAGA+AGG - chr3_3:58189822-58189841 Msa0460670:CDS 35.0%
GGATAAAGTGCATAAGAGAA+GGG - chr3_3:58189823-58189842 Msa0460670:CDS 35.0%
GATAAAGTGCATAAGAGAAG+GGG - chr3_3:58189824-58189843 Msa0460670:CDS 35.0%
ATAAAGTGCATAAGAGAAGG+GGG - chr3_3:58189825-58189844 Msa0460670:CDS 35.0%
GGAATGAGGTTTACAATTAC+AGG - chr3_3:58189846-58189865 Msa0460670:CDS 35.0%
AGGTTTACAATTACAGGTTC+TGG - chr3_3:58189852-58189871 Msa0460670:CDS 35.0%
CATTGTTGGTGTGAAAGTTA+AGG - chr3_3:58189920-58189939 Msa0460670:CDS 35.0%
AAAGTTAAGGGTTCAAGAAC+TGG - chr3_3:58189933-58189952 Msa0460670:CDS 35.0%
AAACCAACCTCTTTCATTTG+AGG - chr3_3:58190013-58190032 Msa0460670:CDS 35.0%
ACAATGTAGCTCCTAAGAAT+TGG - chr3_3:58190069-58190088 Msa0460670:CDS 35.0%
CAAAACTTGTGGAAGAAGAA+TGG + chr3_3:58190172-58190191 None:intergenic 35.0%
TGGCCTAAAATTCAGAAAAC+AGG + chr3_3:58190249-58190268 None:intergenic 35.0%
GAAGAGTAATGAGAATTGGA+TGG + chr3_3:58188906-58188925 None:intergenic 35.0%
TGGAGAAGAGTAATGAGAAT+TGG + chr3_3:58188910-58188929 None:intergenic 35.0%
AGGATGTTCCATTTGATAAG+CGG - chr3_3:58189180-58189199 Msa0460670:CDS 35.0%
! AGTTTTTGTGCTCCGAATTA+TGG - chr3_3:58189242-58189261 Msa0460670:CDS 35.0%
! GTTTTTGTGCTCCGAATTAT+GGG - chr3_3:58189243-58189262 Msa0460670:CDS 35.0%
TCAGCATCAAACCCATAATT+CGG + chr3_3:58189257-58189276 None:intergenic 35.0%
!! GAGAAGATTGCTATTTGGAA+AGG - chr3_3:58189338-58189357 Msa0460670:intron 35.0%
!! GAAGATTGCTATTTGGAAAG+GGG - chr3_3:58189340-58189359 Msa0460670:intron 35.0%
!! AAGATTGCTATTTGGAAAGG+GGG - chr3_3:58189341-58189360 Msa0460670:intron 35.0%
TGAATCTATGTGCGACAATT+TGG - chr3_3:58189448-58189467 Msa0460670:intron 35.0%
GAATCTATGTGCGACAATTT+GGG - chr3_3:58189449-58189468 Msa0460670:intron 35.0%
AGATATATCGTAGGTCATGT+AGG - chr3_3:58189577-58189596 Msa0460670:intron 35.0%
GTTAATGGAAGTTTAACACG+TGG + chr3_3:58189651-58189670 None:intergenic 35.0%
! AAAGGACCAAAACGCATTTT+TGG - chr3_3:58189724-58189743 Msa0460670:CDS 35.0%
TATTTATTTGTGCTTGGAGC+AGG - chr3_3:58189802-58189821 Msa0460670:CDS 35.0%
AGGATAAAGTGCATAAGAGA+AGG - chr3_3:58189822-58189841 Msa0460670:CDS 35.0%
GGATAAAGTGCATAAGAGAA+GGG - chr3_3:58189823-58189842 Msa0460670:CDS 35.0%
GATAAAGTGCATAAGAGAAG+GGG - chr3_3:58189824-58189843 Msa0460670:CDS 35.0%
ATAAAGTGCATAAGAGAAGG+GGG - chr3_3:58189825-58189844 Msa0460670:CDS 35.0%
GGAATGAGGTTTACAATTAC+AGG - chr3_3:58189846-58189865 Msa0460670:CDS 35.0%
AGGTTTACAATTACAGGTTC+TGG - chr3_3:58189852-58189871 Msa0460670:CDS 35.0%
CATTGTTGGTGTGAAAGTTA+AGG - chr3_3:58189920-58189939 Msa0460670:CDS 35.0%
AAAGTTAAGGGTTCAAGAAC+TGG - chr3_3:58189933-58189952 Msa0460670:CDS 35.0%
AAACCAACCTCTTTCATTTG+AGG - chr3_3:58190013-58190032 Msa0460670:CDS 35.0%
ACAATGTAGCTCCTAAGAAT+TGG - chr3_3:58190069-58190088 Msa0460670:CDS 35.0%
CAAAACTTGTGGAAGAAGAA+TGG + chr3_3:58190172-58190191 None:intergenic 35.0%
TGGCCTAAAATTCAGAAAAC+AGG + chr3_3:58190249-58190268 None:intergenic 35.0%
ATGTTCCATTTGATAAGCGG+TGG - chr3_3:58189183-58189202 Msa0460670:CDS 40.0%
ATCTTCTCAAAAGCCTCAAC+AGG + chr3_3:58189326-58189345 None:intergenic 40.0%
AGGCTTTGCAAAACATGGTT+CGG + chr3_3:58189491-58189510 None:intergenic 40.0%
ATGTGGTTTATAAGTCGGGT+CGG + chr3_3:58189603-58189622 None:intergenic 40.0%
ACCCGACTTATAAACCACAT+GGG - chr3_3:58189603-58189622 Msa0460670:intron 40.0%
ACCCCATGTGGTTTATAAGT+CGG + chr3_3:58189608-58189627 None:intergenic 40.0%
GTGTTAACATAAACCCCATG+TGG + chr3_3:58189620-58189639 None:intergenic 40.0%
TTAAGGGTTCAAGAACTGGT+TGG - chr3_3:58189937-58189956 Msa0460670:CDS 40.0%
AAGAACTGGTTGGATTCCTA+TGG - chr3_3:58189947-58189966 Msa0460670:CDS 40.0%
AGAACTGGTTGGATTCCTAT+GGG - chr3_3:58189948-58189967 Msa0460670:CDS 40.0%
TGACCTCAAATGAAAGAGGT+TGG + chr3_3:58190019-58190038 None:intergenic 40.0%
CTAGTGACCTCAAATGAAAG+AGG + chr3_3:58190023-58190042 None:intergenic 40.0%
! TTTGAGGTCACTAGTAGTGA+TGG - chr3_3:58190029-58190048 Msa0460670:CDS 40.0%
TGTCCAAAGGTCCAATTCTT+AGG + chr3_3:58190083-58190102 None:intergenic 40.0%
ACCTTTGGACAAACCTTTGA+AGG - chr3_3:58190092-58190111 Msa0460670:CDS 40.0%
!! AGGCCATAGTATTGGTTAGA+AGG - chr3_3:58190263-58190282 Msa0460670:five_prime_UTR 40.0%
ATGTTCCATTTGATAAGCGG+TGG - chr3_3:58189183-58189202 Msa0460670:CDS 40.0%
ATCTTCTCAAAAGCCTCAAC+AGG + chr3_3:58189326-58189345 None:intergenic 40.0%
AGGCTTTGCAAAACATGGTT+CGG + chr3_3:58189491-58189510 None:intergenic 40.0%
ATGTGGTTTATAAGTCGGGT+CGG + chr3_3:58189603-58189622 None:intergenic 40.0%
ACCCGACTTATAAACCACAT+GGG - chr3_3:58189603-58189622 Msa0460670:intron 40.0%
ACCCCATGTGGTTTATAAGT+CGG + chr3_3:58189608-58189627 None:intergenic 40.0%
GTGTTAACATAAACCCCATG+TGG + chr3_3:58189620-58189639 None:intergenic 40.0%
TTAAGGGTTCAAGAACTGGT+TGG - chr3_3:58189937-58189956 Msa0460670:CDS 40.0%
AAGAACTGGTTGGATTCCTA+TGG - chr3_3:58189947-58189966 Msa0460670:CDS 40.0%
AGAACTGGTTGGATTCCTAT+GGG - chr3_3:58189948-58189967 Msa0460670:CDS 40.0%
TGACCTCAAATGAAAGAGGT+TGG + chr3_3:58190019-58190038 None:intergenic 40.0%
CTAGTGACCTCAAATGAAAG+AGG + chr3_3:58190023-58190042 None:intergenic 40.0%
! TTTGAGGTCACTAGTAGTGA+TGG - chr3_3:58190029-58190048 Msa0460670:CDS 40.0%
TGTCCAAAGGTCCAATTCTT+AGG + chr3_3:58190083-58190102 None:intergenic 40.0%
ACCTTTGGACAAACCTTTGA+AGG - chr3_3:58190092-58190111 Msa0460670:CDS 40.0%
!! AGGCCATAGTATTGGTTAGA+AGG - chr3_3:58190263-58190282 Msa0460670:five_prime_UTR 40.0%
GATTCATTGAATGGTGTGGC+TGG + chr3_3:58188939-58188958 None:intergenic 45.0%
GGGAGATTCATTGAATGGTG+TGG + chr3_3:58188943-58188962 None:intergenic 45.0%
GAAGGGGGAGATTCATTGAA+TGG + chr3_3:58188948-58188967 None:intergenic 45.0%
AGGTAGAAGAGGGAGATGAA+GGG + chr3_3:58188965-58188984 None:intergenic 45.0%
TAGGTAGAAGAGGGAGATGA+AGG + chr3_3:58188966-58188985 None:intergenic 45.0%
CATTCGGAGTAGGTAGAAGA+GGG + chr3_3:58188975-58188994 None:intergenic 45.0%
ATCAGAGACGGAGTAGTAAG+TGG + chr3_3:58189012-58189031 None:intergenic 45.0%
ACACACCACCGCTTATCAAA+TGG + chr3_3:58189191-58189210 None:intergenic 45.0%
TGATAAGCGGTGGTGTGTTT+CGG - chr3_3:58189193-58189212 Msa0460670:CDS 45.0%
TTTGATGCTGAGAGTGATGG+TGG - chr3_3:58189266-58189285 Msa0460670:intron 45.0%
! AGCACAAAATGCTGCTTAGG+AGG + chr3_3:58189302-58189321 None:intergenic 45.0%
! GGAAGCACAAAATGCTGCTT+AGG + chr3_3:58189305-58189324 None:intergenic 45.0%
! GCATTTTGTGCTTCCTGTTG+AGG - chr3_3:58189310-58189329 Msa0460670:intron 45.0%
GACCCGACTTATAAACCACA+TGG - chr3_3:58189602-58189621 Msa0460670:intron 45.0%
CCCCATGTGGTTTATAAGTC+GGG + chr3_3:58189607-58189626 None:intergenic 45.0%
CCCGACTTATAAACCACATG+GGG - chr3_3:58189604-58189623 Msa0460670:intron 45.0%
ATCAGTAACGTAGCTGGCAT+AGG - chr3_3:58189894-58189913 Msa0460670:CDS 45.0%
GATTCCTATGGGTCGGAATT+GGG - chr3_3:58189959-58189978 Msa0460670:CDS 45.0%
ATTCCTATGGGTCGGAATTG+GGG - chr3_3:58189960-58189979 Msa0460670:CDS 45.0%
GCTCCTAAGAATTGGACCTT+TGG - chr3_3:58190077-58190096 Msa0460670:CDS 45.0%
GCCTTCAAAGGTTTGTCCAA+AGG + chr3_3:58190096-58190115 None:intergenic 45.0%
! TTGGACAAACCTTTGAAGGC+AGG - chr3_3:58190096-58190115 Msa0460670:CDS 45.0%
CTTGAATTGCCTGCCTTCAA+AGG + chr3_3:58190108-58190127 None:intergenic 45.0%
CATAAACCACCACTTGCGAT+AGG - chr3_3:58190397-58190416 Msa0460670:five_prime_UTR 45.0%
GATTCATTGAATGGTGTGGC+TGG + chr3_3:58188939-58188958 None:intergenic 45.0%
GGGAGATTCATTGAATGGTG+TGG + chr3_3:58188943-58188962 None:intergenic 45.0%
GAAGGGGGAGATTCATTGAA+TGG + chr3_3:58188948-58188967 None:intergenic 45.0%
AGGTAGAAGAGGGAGATGAA+GGG + chr3_3:58188965-58188984 None:intergenic 45.0%
TAGGTAGAAGAGGGAGATGA+AGG + chr3_3:58188966-58188985 None:intergenic 45.0%
CATTCGGAGTAGGTAGAAGA+GGG + chr3_3:58188975-58188994 None:intergenic 45.0%
ATCAGAGACGGAGTAGTAAG+TGG + chr3_3:58189012-58189031 None:intergenic 45.0%
ACACACCACCGCTTATCAAA+TGG + chr3_3:58189191-58189210 None:intergenic 45.0%
TGATAAGCGGTGGTGTGTTT+CGG - chr3_3:58189193-58189212 Msa0460670:CDS 45.0%
TTTGATGCTGAGAGTGATGG+TGG - chr3_3:58189266-58189285 Msa0460670:intron 45.0%
! AGCACAAAATGCTGCTTAGG+AGG + chr3_3:58189302-58189321 None:intergenic 45.0%
! GGAAGCACAAAATGCTGCTT+AGG + chr3_3:58189305-58189324 None:intergenic 45.0%
! GCATTTTGTGCTTCCTGTTG+AGG - chr3_3:58189310-58189329 Msa0460670:intron 45.0%
GACCCGACTTATAAACCACA+TGG - chr3_3:58189602-58189621 Msa0460670:intron 45.0%
CCCCATGTGGTTTATAAGTC+GGG + chr3_3:58189607-58189626 None:intergenic 45.0%
CCCGACTTATAAACCACATG+GGG - chr3_3:58189604-58189623 Msa0460670:intron 45.0%
ATCAGTAACGTAGCTGGCAT+AGG - chr3_3:58189894-58189913 Msa0460670:CDS 45.0%
GATTCCTATGGGTCGGAATT+GGG - chr3_3:58189959-58189978 Msa0460670:CDS 45.0%
ATTCCTATGGGTCGGAATTG+GGG - chr3_3:58189960-58189979 Msa0460670:CDS 45.0%
GCTCCTAAGAATTGGACCTT+TGG - chr3_3:58190077-58190096 Msa0460670:CDS 45.0%
GCCTTCAAAGGTTTGTCCAA+AGG + chr3_3:58190096-58190115 None:intergenic 45.0%
! TTGGACAAACCTTTGAAGGC+AGG - chr3_3:58190096-58190115 Msa0460670:CDS 45.0%
CTTGAATTGCCTGCCTTCAA+AGG + chr3_3:58190108-58190127 None:intergenic 45.0%
CATAAACCACCACTTGCGAT+AGG - chr3_3:58190397-58190416 Msa0460670:five_prime_UTR 45.0%
TCATTGAATGGTGTGGCTGG+TGG + chr3_3:58188936-58188955 None:intergenic 50.0%
GTAGAAGAGGGAGATGAAGG+GGG + chr3_3:58188963-58188982 None:intergenic 50.0%
GGTAGAAGAGGGAGATGAAG+GGG + chr3_3:58188964-58188983 None:intergenic 50.0%
CCATTCGGAGTAGGTAGAAG+AGG + chr3_3:58188976-58188995 None:intergenic 50.0%
CCTCTTCTACCTACTCCGAA+TGG - chr3_3:58188973-58188992 Msa0460670:CDS 50.0%
!! GTCTCTGGTGTCATCAGAGA+CGG + chr3_3:58189024-58189043 None:intergenic 50.0%
GTCTCTGATGACACCAGAGA+CGG - chr3_3:58189023-58189042 Msa0460670:CDS 50.0%
TCTCTGATGACACCAGAGAC+GGG - chr3_3:58189024-58189043 Msa0460670:CDS 50.0%
TACGGTGACACTCACAGAGA+CGG - chr3_3:58189065-58189084 Msa0460670:CDS 50.0%
GACACTCACAGAGACGGTTA+TGG - chr3_3:58189071-58189090 Msa0460670:CDS 50.0%
AGAGACGGTTATGGCATCAC+CGG - chr3_3:58189080-58189099 Msa0460670:CDS 50.0%
CTTTGAGCTACGCTGTCTTG+AGG - chr3_3:58189157-58189176 Msa0460670:CDS 50.0%
GATAAGCGGTGGTGTGTTTC+GGG - chr3_3:58189194-58189213 Msa0460670:CDS 50.0%
GGGTTTGATGCTGAGAGTGA+TGG - chr3_3:58189263-58189282 Msa0460670:intron 50.0%
GCATAAGAGAAGGGGGAATG+AGG - chr3_3:58189832-58189851 Msa0460670:CDS 50.0%
! GTGCTGATCAGTAACGTAGC+TGG - chr3_3:58189888-58189907 Msa0460670:CDS 50.0%
GCTGGCATAGGAGACATTGT+TGG - chr3_3:58189906-58189925 Msa0460670:CDS 50.0%
CTGGTTGGATTCCTATGGGT+CGG - chr3_3:58189952-58189971 Msa0460670:CDS 50.0%
GGATTCCTATGGGTCGGAAT+TGG - chr3_3:58189958-58189977 Msa0460670:CDS 50.0%
GTCGGAATTGGGGTCAAATC+TGG - chr3_3:58189970-58189989 Msa0460670:CDS 50.0%
TCATTGAATGGTGTGGCTGG+TGG + chr3_3:58188936-58188955 None:intergenic 50.0%
GTAGAAGAGGGAGATGAAGG+GGG + chr3_3:58188963-58188982 None:intergenic 50.0%
GGTAGAAGAGGGAGATGAAG+GGG + chr3_3:58188964-58188983 None:intergenic 50.0%
CCATTCGGAGTAGGTAGAAG+AGG + chr3_3:58188976-58188995 None:intergenic 50.0%
CCTCTTCTACCTACTCCGAA+TGG - chr3_3:58188973-58188992 Msa0460670:CDS 50.0%
!! GTCTCTGGTGTCATCAGAGA+CGG + chr3_3:58189024-58189043 None:intergenic 50.0%
GTCTCTGATGACACCAGAGA+CGG - chr3_3:58189023-58189042 Msa0460670:CDS 50.0%
TCTCTGATGACACCAGAGAC+GGG - chr3_3:58189024-58189043 Msa0460670:CDS 50.0%
TACGGTGACACTCACAGAGA+CGG - chr3_3:58189065-58189084 Msa0460670:CDS 50.0%
GACACTCACAGAGACGGTTA+TGG - chr3_3:58189071-58189090 Msa0460670:CDS 50.0%
AGAGACGGTTATGGCATCAC+CGG - chr3_3:58189080-58189099 Msa0460670:CDS 50.0%
CTTTGAGCTACGCTGTCTTG+AGG - chr3_3:58189157-58189176 Msa0460670:CDS 50.0%
GATAAGCGGTGGTGTGTTTC+GGG - chr3_3:58189194-58189213 Msa0460670:CDS 50.0%
GGGTTTGATGCTGAGAGTGA+TGG - chr3_3:58189263-58189282 Msa0460670:intron 50.0%
GCATAAGAGAAGGGGGAATG+AGG - chr3_3:58189832-58189851 Msa0460670:CDS 50.0%
! GTGCTGATCAGTAACGTAGC+TGG - chr3_3:58189888-58189907 Msa0460670:CDS 50.0%
GCTGGCATAGGAGACATTGT+TGG - chr3_3:58189906-58189925 Msa0460670:CDS 50.0%
CTGGTTGGATTCCTATGGGT+CGG - chr3_3:58189952-58189971 Msa0460670:CDS 50.0%
GGATTCCTATGGGTCGGAAT+TGG - chr3_3:58189958-58189977 Msa0460670:CDS 50.0%
GTCGGAATTGGGGTCAAATC+TGG - chr3_3:58189970-58189989 Msa0460670:CDS 50.0%
! AATGGTGTGGCTGGTGGTGA+TGG + chr3_3:58188930-58188949 None:intergenic 55.0%
GACGGAGTAGTAAGTGGCGT+GGG + chr3_3:58189006-58189025 None:intergenic 55.0%
AGACGGAGTAGTAAGTGGCG+TGG + chr3_3:58189007-58189026 None:intergenic 55.0%
CTCTGATGACACCAGAGACG+GGG - chr3_3:58189025-58189044 Msa0460670:CDS 55.0%
AGTGAGACTCTCTTCGTGCG+TGG - chr3_3:58189116-58189135 Msa0460670:CDS 55.0%
TTCGTGCGTGGTCAGATCTG+TGG - chr3_3:58189128-58189147 Msa0460670:CDS 55.0%
TGAGCTACGCTGTCTTGAGG+AGG - chr3_3:58189160-58189179 Msa0460670:CDS 55.0%
ACATGCCTGTGCAGTATCGC+AGG - chr3_3:58189366-58189385 Msa0460670:intron 55.0%
GAGTACCTGCGATACTGCAC+AGG + chr3_3:58189374-58189393 None:intergenic 55.0%
TGACCCCAATTCCGACCCAT+AGG + chr3_3:58189966-58189985 None:intergenic 55.0%
CCTAAGCCTATCGCAAGTGG+TGG + chr3_3:58190406-58190425 None:intergenic 55.0%
CCACCACTTGCGATAGGCTT+AGG - chr3_3:58190403-58190422 Msa0460670:five_prime_UTR 55.0%
! AATGGTGTGGCTGGTGGTGA+TGG + chr3_3:58188930-58188949 None:intergenic 55.0%
GACGGAGTAGTAAGTGGCGT+GGG + chr3_3:58189006-58189025 None:intergenic 55.0%
AGACGGAGTAGTAAGTGGCG+TGG + chr3_3:58189007-58189026 None:intergenic 55.0%
CTCTGATGACACCAGAGACG+GGG - chr3_3:58189025-58189044 Msa0460670:CDS 55.0%
AGTGAGACTCTCTTCGTGCG+TGG - chr3_3:58189116-58189135 Msa0460670:CDS 55.0%
TTCGTGCGTGGTCAGATCTG+TGG - chr3_3:58189128-58189147 Msa0460670:CDS 55.0%
TGAGCTACGCTGTCTTGAGG+AGG - chr3_3:58189160-58189179 Msa0460670:CDS 55.0%
ACATGCCTGTGCAGTATCGC+AGG - chr3_3:58189366-58189385 Msa0460670:intron 55.0%
GAGTACCTGCGATACTGCAC+AGG + chr3_3:58189374-58189393 None:intergenic 55.0%
TGACCCCAATTCCGACCCAT+AGG + chr3_3:58189966-58189985 None:intergenic 55.0%
CCTAAGCCTATCGCAAGTGG+TGG + chr3_3:58190406-58190425 None:intergenic 55.0%
GGAGTAGTAAGTGGCGTGGG+CGG + chr3_3:58189003-58189022 None:intergenic 60.0%
GACACCAGAGACGGGGTAGA+CGG - chr3_3:58189032-58189051 Msa0460670:CDS 60.0%
ACACCAGAGACGGGGTAGAC+GGG - chr3_3:58189033-58189052 Msa0460670:CDS 60.0%
GTAGACGGGGCATGTGGCTA+CGG - chr3_3:58189047-58189066 Msa0460670:CDS 60.0%
CTCACTGAGAGCAGCAGCAC+CGG + chr3_3:58189102-58189121 None:intergenic 60.0%
GGAGTAGTAAGTGGCGTGGG+CGG + chr3_3:58189003-58189022 None:intergenic 60.0%
GACACCAGAGACGGGGTAGA+CGG - chr3_3:58189032-58189051 Msa0460670:CDS 60.0%
ACACCAGAGACGGGGTAGAC+GGG - chr3_3:58189033-58189052 Msa0460670:CDS 60.0%
GTAGACGGGGCATGTGGCTA+CGG - chr3_3:58189047-58189066 Msa0460670:CDS 60.0%
CTCACTGAGAGCAGCAGCAC+CGG + chr3_3:58189102-58189121 None:intergenic 60.0%
GGCGGACAGCCATTCGGAGT+AGG + chr3_3:58188985-58189004 None:intergenic 65.0%
CACCAGAGACGGGGTAGACG+GGG - chr3_3:58189034-58189053 Msa0460670:CDS 65.0%
GGCGGACAGCCATTCGGAGT+AGG + chr3_3:58188985-58189004 None:intergenic 65.0%
CACCAGAGACGGGGTAGACG+GGG - chr3_3:58189034-58189053 Msa0460670:CDS 65.0%
GGCGTGGGCGGACAGCCATT+CGG + chr3_3:58188991-58189010 None:intergenic 70.0%
TGCCCCGTCTACCCCGTCTC+TGG + chr3_3:58189039-58189058 None:intergenic 70.0%
GACGGGGTAGACGGGGCATG+TGG - chr3_3:58189041-58189060 Msa0460670:CDS 70.0%
GGCGTGGGCGGACAGCCATT+CGG + chr3_3:58188991-58189010 None:intergenic 70.0%
TGCCCCGTCTACCCCGTCTC+TGG + chr3_3:58189039-58189058 None:intergenic 70.0%
GACGGGGTAGACGGGGCATG+TGG - chr3_3:58189041-58189060 Msa0460670:CDS 70.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 58188668 58190425 58188668 ID=Msa0460670;Name=Msa0460670
chr3_3 mRNA 58188668 58190425 58188668 ID=Msa0460670-mRNA-1;Parent=Msa0460670;Name=Msa0460670-mRNA-1;_AED=0.34;_eAED=0.34;_QI=169|1|1|1|1|1|2|292|286
chr3_3 exon 58188668 58189269 58188668 ID=Msa0460670-mRNA-1:exon:12119;Parent=Msa0460670-mRNA-1
chr3_3 exon 58189706 58190425 58189706 ID=Msa0460670-mRNA-1:exon:12118;Parent=Msa0460670-mRNA-1
chr3_3 five_prime_UTR 58190257 58190425 58190257 ID=Msa0460670-mRNA-1:five_prime_utr;Parent=Msa0460670-mRNA-1
chr3_3 CDS 58189706 58190256 58189706 ID=Msa0460670-mRNA-1:cds;Parent=Msa0460670-mRNA-1
chr3_3 CDS 58188960 58189269 58188960 ID=Msa0460670-mRNA-1:cds;Parent=Msa0460670-mRNA-1
chr3_3 three_prime_UTR 58188668 58188959 58188668 ID=Msa0460670-mRNA-1:three_prime_utr;Parent=Msa0460670-mRNA-1
Gene Sequence

>Msa0460670

ATGTCTCAACCTTGTGTGTTAATCTCTTTTTACATTATTACCATGCAACTAACTATTCTATTTTCACCATCCAATTCTCATTACTCTTCTCCATCACCACCAGCCACACCATTCAATGAATCTCCCCCTTCATCTCCCTCTTCTACCTACTCCGAATGGCTGTCCGCCCACGCCACTTACTACTCCGTCTCTGATGACACCAGAGACGGGGTAGACGGGGCATGTGGCTACGGTGACACTCACAGAGACGGTTATGGCATCACCGGTGCTGCTGCTCTCAGTGAGACTCTCTTCGTGCGTGGTCAGATCTGTGGTGCGTGCTTTGAGCTACGCTGTCTTGAGGAGGATGTTCCATTTGATAAGCGGTGGTGTGTTTCGGGTAGTTCTGTTGTTGTTACTGCTACGAGTTTTTGTGCTCCGAATTATGGGTTTGATGCTGAGAGTGATGGTGGATATTGTAATCCTCCTAAGCAGCATTTTGTGCTTCCTGTTGAGGCTTTTGAGAAGATTGCTATTTGGAAAGGGGGTAACATGCCTGTGCAGTATCGCAGGATAAAGTGCATAAGAGAAGGGGGAATGAGGTTTACAATTACAGGTTCTGGTATCTTCAATTCAGTGCTGATCAGTAACGTAGCTGGCATAGGAGACATTGTTGGTGTGAAAGTTAAGGGTTCAAGAACTGGTTGGATTCCTATGGGTCGGAATTGGGGTCAAATCTGGCATGTAAATGCGTTACTACAAAACCAACCTCTTTCATTTGAGGTCACTAGTAGTGATGGTGTTACTATTACATCTTACAATGTAGCTCCTAAGAATTGGACCTTTGGACAAACCTTTGAAGGCAGGCAATTCAAGTCTTAG
Protein sequence

>Msa0460670

MSQPCVLISFYIITMQLTILFSPSNSHYSSPSPPATPFNESPPSSPSSTYSEWLSAHATYYSVSDDTRDGVDGACGYGDTHRDGYGITGAAALSETLFVRGQICGACFELRCLEEDVPFDKRWCVSGSSVVVTATSFCAPNYGFDAESDGGYCNPPKQHFVLPVEAFEKIAIWKGGNMPVQYRRIKCIREGGMRFTITGSGIFNSVLISNVAGIGDIVGVKVKGSRTGWIPMGRNWGQIWHVNALLQNQPLSFEVTSSDGVTITSYNVAPKNWTFGQTFEGRQFKS*