AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0090380

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0090380 MtrunA17_Chr1g0210284 94.231 364 21 0 864 1227 231 594 0.0 676
Msa0090380 MtrunA17_Chr1g0210284 79.023 348 34 4 492 800 237 584 1.40e-180 544
Msa0090380 MtrunA17_Chr1g0210284 80.716 363 38 5 81 416 215 572 3.32e-178 538
Msa0090380 MtrunA17_Chr1g0210284 92.727 110 4 1 3 108 2 111 5.90e-56 205
Msa0090380 MtrunA17_Chr1g0210284 98.718 78 1 0 798 875 14 91 1.55e-40 159
Msa0090380 MtrunA17_Chr1g0210284 86.585 82 11 0 415 496 15 96 1.70e-36 147
Msa0090380 MtrunA17_Chr1g0210274 93.681 364 23 0 864 1227 231 594 0.0 672
Msa0090380 MtrunA17_Chr1g0210274 82.337 368 33 5 81 421 215 577 0.0 553
Msa0090380 MtrunA17_Chr1g0210274 76.323 359 46 4 492 811 237 595 1.11e-178 539
Msa0090380 MtrunA17_Chr1g0210274 95.455 110 1 1 3 108 2 111 5.74e-58 211
Msa0090380 MtrunA17_Chr1g0210274 94.872 78 4 0 798 875 14 91 5.18e-39 154
Msa0090380 MtrunA17_Chr1g0210274 86.585 82 11 0 415 496 15 96 2.94e-36 146
Msa0090380 MtrunA17_Chr1g0210291 66.848 368 113 4 864 1226 230 593 2.96e-157 483
Msa0090380 MtrunA17_Chr1g0210291 66.567 335 84 5 109 421 247 575 1.48e-135 426
Msa0090380 MtrunA17_Chr1g0210291 58.840 362 97 6 492 804 236 594 1.17e-126 402
Msa0090380 MtrunA17_Chr1g0210291 70.000 100 26 1 13 108 11 110 3.33e-36 146
Msa0090380 MtrunA17_Chr1g0210291 75.309 81 20 0 416 496 15 95 1.86e-31 131
Msa0090380 MtrunA17_Chr1g0210291 69.620 79 24 0 797 875 12 90 9.73e-29 123
Msa0090380 MtrunA17_Chr7g0264861 60.450 311 116 2 915 1220 296 604 6.12e-120 385
Msa0090380 MtrunA17_Chr7g0264861 58.621 290 105 4 143 417 296 585 1.50e-99 330
Msa0090380 MtrunA17_Chr7g0264861 55.839 274 91 4 556 799 328 601 2.44e-91 307
Msa0090380 MtrunA17_Chr7g0264861 70.833 96 24 1 17 108 19 114 1.09e-34 142
Msa0090380 MtrunA17_Chr7g0264861 72.152 79 22 0 416 494 19 97 2.62e-29 125
Msa0090380 MtrunA17_Chr7g0264861 71.053 76 22 0 800 875 19 94 2.65e-28 122
Msa0090380 MtrunA17_Chr1g0171591 55.618 356 137 5 879 1216 244 596 7.30e-118 379
Msa0090380 MtrunA17_Chr1g0171591 53.593 334 129 4 110 417 247 580 1.08e-101 335
Msa0090380 MtrunA17_Chr1g0171591 47.790 362 135 7 492 799 235 596 6.41e-93 311
Msa0090380 MtrunA17_Chr1g0171591 65.686 102 31 1 11 108 8 109 1.17e-36 147
Msa0090380 MtrunA17_Chr1g0171591 62.366 93 35 0 404 496 2 94 6.38e-32 133
Msa0090380 MtrunA17_Chr1g0171591 65.823 79 27 0 797 875 11 89 9.03e-29 123
Msa0090380 MtrunA17_Chr1g0174101 52.909 361 159 3 863 1219 228 581 1.86e-114 369
Msa0090380 MtrunA17_Chr1g0174101 53.333 345 129 8 101 417 231 571 2.87e-98 325
Msa0090380 MtrunA17_Chr1g0174101 49.107 336 132 5 492 788 235 570 1.37e-90 304
Msa0090380 MtrunA17_Chr1g0174101 63.725 102 33 1 11 108 8 109 5.36e-35 142
Msa0090380 MtrunA17_Chr1g0174101 64.286 84 30 0 413 496 11 94 6.24e-29 124
Msa0090380 MtrunA17_Chr1g0174101 62.025 79 30 0 797 875 11 89 1.25e-26 116
Msa0090380 MtrunA17_Chr2g0330551 41.880 234 124 1 966 1199 317 538 2.76e-54 199
Msa0090380 MtrunA17_Chr2g0330551 41.256 223 115 3 192 410 328 538 3.44e-47 178
Msa0090380 MtrunA17_Chr2g0330551 37.387 222 127 3 573 782 317 538 1.84e-38 152
Msa0090380 MtrunA17_Chr5g0442481 37.712 236 136 2 964 1199 309 533 2.04e-51 190
Msa0090380 MtrunA17_Chr5g0442481 37.668 223 124 4 192 410 322 533 4.82e-45 171
Msa0090380 MtrunA17_Chr5g0442481 33.778 225 136 3 571 782 309 533 2.45e-36 145
Msa0090380 MtrunA17_Chr5g0442481 40.000 90 44 2 27 106 11 100 5.51e-11 66.6
Msa0090380 MtrunA17_Chr5g0442481 41.489 94 48 2 426 513 11 103 8.85e-11 66.2
Msa0090380 MtrunA17_Chr4g0037301 40.175 229 126 2 962 1190 317 534 1.16e-45 174
Msa0090380 MtrunA17_Chr4g0037301 36.923 260 139 6 154 401 288 534 5.69e-40 157
Msa0090380 MtrunA17_Chr4g0037301 36.199 221 122 5 569 773 317 534 2.51e-31 130
Msa0090380 MtrunA17_Chr7g0225191 40.756 238 128 4 962 1189 342 576 1.31e-45 174
Msa0090380 MtrunA17_Chr7g0225191 35.915 284 148 8 146 400 298 576 4.03e-37 149
Msa0090380 MtrunA17_Chr7g0225191 35.000 240 127 7 534 762 314 535 1.01e-32 135
Msa0090380 MtrunA17_Chr7g0225191 40.404 99 52 2 16 107 1 99 1.23e-12 72.4
Msa0090380 MtrunA17_Chr4g0064981 36.245 229 140 3 962 1190 337 559 3.52e-39 155
Msa0090380 MtrunA17_Chr4g0064981 32.500 320 174 9 118 401 246 559 1.95e-33 137
Msa0090380 MtrunA17_Chr4g0064981 30.942 223 136 4 569 773 337 559 2.49e-25 112
Msa0090380 MtrunA17_Chr4g0064981 42.353 85 45 1 28 108 12 96 1.01e-13 75.9
Msa0090380 MtrunA17_Chr5g0405621 34.016 244 145 3 962 1205 305 532 3.37e-37 148
Msa0090380 MtrunA17_Chr5g0405621 34.783 230 130 5 192 417 320 533 2.74e-32 133
Msa0090380 MtrunA17_Chr5g0405621 30.213 235 142 5 569 788 305 532 5.29e-25 111
Msa0090380 MtrunA17_Chr3g0132161 32.302 291 165 6 918 1190 278 554 3.80e-36 145
Msa0090380 MtrunA17_Chr3g0132161 33.566 286 151 8 146 401 278 554 7.32e-31 129
Msa0090380 MtrunA17_Chr3g0132161 29.317 249 127 8 567 773 313 554 4.12e-22 102
Msa0090380 MtrunA17_Chr3g0132161 38.889 90 51 1 22 107 10 99 2.77e-13 74.3
Msa0090380 MtrunA17_Chr2g0304561 36.364 231 137 3 962 1190 331 553 6.93e-36 144
Msa0090380 MtrunA17_Chr2g0304561 31.429 315 179 8 118 401 245 553 4.98e-31 130
Msa0090380 MtrunA17_Chr2g0304561 32.751 229 124 6 569 773 331 553 6.49e-24 108
Msa0090380 MtrunA17_Chr2g0304561 37.647 85 49 1 28 108 13 97 3.59e-11 67.4
Msa0090380 MtrunA17_Chr2g0333371 31.441 229 114 5 962 1190 104 289 1.33e-29 120
Msa0090380 MtrunA17_Chr2g0333371 30.667 225 113 6 181 401 104 289 2.98e-27 114
Msa0090380 MtrunA17_Chr2g0333371 31.532 222 99 8 569 773 104 289 1.17e-20 94.4
Msa0090380 MtrunA17_Chr5g0408921 28.099 242 160 8 965 1202 338 569 4.54e-13 73.6
Msa0090380 MtrunA17_Chr5g0408921 28.947 228 148 8 192 413 350 569 3.33e-12 70.9
Msa0090380 MtrunA17_Chr7g0251871 27.160 243 161 8 965 1203 332 562 6.56e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0090380 AT2G39210.1 65.363 358 111 2 876 1220 238 595 1.77e-152 471
Msa0090380 AT2G39210.1 63.077 325 95 5 110 411 244 566 1.15e-125 400
Msa0090380 AT2G39210.1 59.701 335 92 4 492 783 232 566 5.39e-122 390
Msa0090380 AT2G39210.1 71.717 99 24 1 14 108 8 106 1.18e-37 151
Msa0090380 AT2G39210.1 73.171 82 22 0 415 496 10 91 3.92e-32 134
Msa0090380 AT2G39210.1 77.632 76 17 0 800 875 11 86 3.63e-31 131
Msa0090380 AT2G28120.1 57.012 328 138 2 876 1202 234 559 1.15e-119 383
Msa0090380 AT2G28120.1 54.517 321 128 5 110 413 240 559 3.38e-100 331
Msa0090380 AT2G28120.1 51.376 327 121 5 497 785 233 559 1.27e-93 313
Msa0090380 AT2G28120.1 69.565 92 24 1 21 108 11 102 1.70e-32 135
Msa0090380 AT2G28120.1 63.855 83 30 0 420 502 11 93 6.78e-27 117
Msa0090380 AT2G28120.1 70.833 72 21 0 804 875 11 82 2.82e-26 115
Msa0090380 AT2G34355.2 37.037 270 145 3 937 1196 116 370 3.10e-55 197
Msa0090380 AT2G34355.2 35.206 267 140 4 145 407 133 370 2.15e-47 174
Msa0090380 AT2G34355.2 37.900 219 124 3 573 779 152 370 1.29e-41 157
Msa0090380 AT1G74780.1 42.128 235 124 1 966 1200 311 533 2.17e-54 199
Msa0090380 AT1G74780.1 42.727 220 110 3 196 411 326 533 1.67e-48 182
Msa0090380 AT1G74780.1 36.323 223 130 3 573 783 311 533 2.42e-38 152
Msa0090380 AT1G74780.1 38.889 108 46 2 21 108 1 108 6.59e-13 73.6
Msa0090380 AT1G74780.1 40.860 93 39 1 426 502 7 99 6.30e-12 70.1
Msa0090380 AT2G34355.1 37.037 270 145 3 937 1196 266 520 1.01e-53 197
Msa0090380 AT2G34355.1 35.206 267 140 4 145 407 283 520 3.78e-46 175
Msa0090380 AT2G34355.1 37.900 219 124 3 573 779 302 520 1.71e-40 158
Msa0090380 AT2G34350.1 36.667 270 144 3 927 1196 280 522 4.39e-51 189
Msa0090380 AT2G34350.1 32.219 329 177 7 109 407 210 522 5.22e-42 162
Msa0090380 AT2G34350.1 34.156 243 148 3 549 779 280 522 2.32e-37 149
Msa0090380 AT2G34350.2 36.667 270 144 3 927 1196 280 522 4.39e-51 189
Msa0090380 AT2G34350.2 32.219 329 177 7 109 407 210 522 5.22e-42 162
Msa0090380 AT2G34350.2 34.156 243 148 3 549 779 280 522 2.32e-37 149
Msa0090380 AT1G18940.1 40.271 221 120 1 970 1190 308 516 3.18e-50 187
Msa0090380 AT1G18940.1 39.252 214 114 3 192 401 315 516 2.53e-44 169
Msa0090380 AT1G18940.1 35.885 209 122 3 577 773 308 516 9.52e-36 144
Msa0090380 AT1G18940.1 40.741 108 46 2 19 108 1 108 7.71e-15 79.7
Msa0090380 AT1G18940.1 36.885 122 62 2 418 525 1 121 1.11e-12 72.8
Msa0090380 AT1G18940.1 47.761 67 35 0 802 868 1 67 1.08e-11 69.3
Msa0090380 AT2G16660.1 39.035 228 128 2 962 1189 313 529 6.00e-46 175
Msa0090380 AT2G16660.1 39.906 213 113 4 192 400 328 529 1.84e-39 155
Msa0090380 AT2G16660.1 34.247 219 127 4 569 772 313 529 3.70e-31 130
Msa0090380 AT4G34950.1 35.907 259 145 3 931 1189 313 550 6.27e-46 175
Msa0090380 AT4G34950.1 36.145 249 136 5 164 400 313 550 2.64e-39 155
Msa0090380 AT4G34950.1 33.790 219 128 4 569 772 334 550 5.10e-31 130
Msa0090380 AT3G01930.1 38.235 238 142 3 962 1199 239 471 4.35e-43 164
Msa0090380 AT3G01930.1 32.852 277 168 7 138 410 209 471 4.40e-36 144
Msa0090380 AT3G01930.1 29.455 275 158 7 532 782 209 471 1.09e-26 115
Msa0090380 AT3G01930.2 38.235 238 142 3 962 1199 352 584 1.57e-42 165
Msa0090380 AT3G01930.2 33.091 275 166 7 140 410 324 584 2.41e-35 144
Msa0090380 AT3G01930.2 29.670 273 156 7 534 782 324 584 1.80e-26 116
Msa0090380 AT3G01930.2 40.449 89 49 1 23 107 12 100 6.19e-13 73.6
Msa0090380 AT5G50630.1 33.882 304 174 5 889 1189 251 530 2.83e-42 164
Msa0090380 AT5G50630.1 33.775 302 160 9 117 400 251 530 5.97e-35 142
Msa0090380 AT5G50630.1 29.904 311 175 9 493 772 232 530 9.25e-28 120
Msa0090380 AT5G50630.1 42.222 90 47 2 23 107 12 101 1.34e-13 75.5
Msa0090380 AT5G50520.1 33.882 304 174 5 889 1189 251 530 2.83e-42 164
Msa0090380 AT5G50520.1 33.775 302 160 9 117 400 251 530 5.97e-35 142
Msa0090380 AT5G50520.1 29.904 311 175 9 493 772 232 530 9.25e-28 120
Msa0090380 AT5G50520.1 42.222 90 47 2 23 107 12 101 1.34e-13 75.5
Msa0090380 AT5G14120.1 37.975 237 142 3 962 1198 347 578 4.33e-42 164
Msa0090380 AT5G14120.1 32.117 274 168 7 140 409 319 578 9.32e-34 139
Msa0090380 AT5G14120.1 28.889 270 160 6 534 781 319 578 1.54e-25 113
Msa0090380 AT5G14120.1 40.659 91 50 1 21 107 10 100 2.14e-13 75.1
Msa0090380 AT1G80530.1 34.498 229 136 4 962 1190 330 544 3.70e-34 140
Msa0090380 AT1G80530.1 33.621 232 128 7 182 401 327 544 7.33e-29 123
Msa0090380 AT1G80530.1 31.081 222 129 6 569 773 330 544 4.49e-22 102
Msa0090380 AT2G16660.2 46.835 79 40 1 962 1040 313 389 3.13e-16 82.8
Msa0090380 AT2G16660.2 48.438 64 31 1 192 255 328 389 5.65e-11 66.6
Msa0090380 AT3G01630.2 26.510 298 188 7 121 401 279 562 1.91e-13 75.1
Msa0090380 AT3G01630.2 24.768 323 219 9 885 1190 247 562 2.09e-11 68.6
Msa0090380 AT3G01630.1 26.510 298 188 7 121 401 261 544 1.91e-13 75.1
Msa0090380 AT3G01630.1 24.768 323 219 9 885 1190 229 544 2.10e-11 68.6
Msa0090380 AT3G01930.3 40.449 89 49 1 23 107 12 100 2.34e-13 74.3
Msa0090380 AT3G01930.3 47.368 76 38 1 962 1037 352 425 7.76e-11 66.2

Find 218 sgRNAs with CRISPR-Local

Find 731 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCACCTTTGTAAAACTTTC+TGG 0.108023 1_2:-72356592 None:intergenic
TATGCAACTTTGTATAATTT+TGG 0.150653 1_2:+72365569 Msa0090380:CDS
AACATATCTTCCCACCATTT+TGG 0.169832 1_2:-72361564 None:intergenic
AACACATCTTCCCACCATTT+TGG 0.178261 1_2:-72355892 None:intergenic
TGCTGTTGTTTCACTTATTT+TGG 0.181515 1_2:+72356560 Msa0090380:CDS
TGCTGTTGTTTCACTTATTT+TGG 0.181515 1_2:+72365781 Msa0090380:CDS
TATGCAACTTTATATAATTT+TGG 0.182353 1_2:+72356348 Msa0090380:CDS
TGCTGTTGTTAACCTTATTT+TGG 0.216909 1_2:+72362232 Msa0090380:CDS
ATTGCAGCTGCAACTTTCTT+TGG 0.248818 1_2:+72362209 Msa0090380:intron
TACGTAGCTTCAGTAATAAT+TGG 0.273011 1_2:+72356258 Msa0090380:CDS
TACGTAGCTTCAGTAATAAT+TGG 0.273011 1_2:+72365479 Msa0090380:CDS
TTCCATTGGTGTTCATGGTT+TGG 0.277479 1_2:+72354937 Msa0090380:CDS
GGTGCTATTCTCAATTTCTT+TGG 0.281836 1_2:+72355211 Msa0090380:CDS
AGCAACGTTGGTGTCCTTTC+AGG 0.282717 1_2:+72355145 Msa0090380:CDS
TCCATTGGTGTTCATGGTTT+GGG 0.288773 1_2:+72354938 Msa0090380:CDS
TCTTTGGTTACTTCATGATT+TGG 0.300114 1_2:+72355227 Msa0090380:CDS
TTGTCCTAGCCACCAAAATA+AGG 0.303085 1_2:-72362244 None:intergenic
GTGGCATGTATTTGTGGTAT+TGG 0.316784 1_2:+72361660 Msa0090380:CDS
GTGACATATACAAGAGATAT+AGG 0.328395 1_2:+72356610 Msa0090380:CDS
GTGACATATACAAGAGATAT+AGG 0.328395 1_2:+72362282 Msa0090380:CDS
TATGCAGCTTCAGTGATTAT+CGG 0.345986 1_2:+72361930 Msa0090380:CDS
ACCACCGTCCGGTGATGAAT+TGG 0.352452 1_2:-72364218 None:intergenic
GTAAGCATTTGGAATTATCT+AGG 0.357538 1_2:+72356099 Msa0090380:CDS
GTAAGCATTTGGAATTATCT+AGG 0.357538 1_2:+72365320 Msa0090380:CDS
TTAACGGCAATTGATAATCT+TGG 0.358953 1_2:+72356018 Msa0090380:CDS
ACCACCGTCCGGTGATGAAT+TGG 0.362421 1_2:-72354982 None:intergenic
CTTGGAAAGCATAGAATAGA+AGG 0.363836 1_2:+72362134 Msa0090380:CDS
AGTTTCACACAGGGTGAGTT+TGG 0.364101 1_2:+72361330 Msa0090380:CDS
AGTTTCACACAGGGTGAGTT+TGG 0.364101 1_2:+72364894 Msa0090380:CDS
TTGACAGCAATTGATAATCT+TGG 0.365572 1_2:+72365239 Msa0090380:CDS
CTTGGAAAGCATAGAATAGA+AGG 0.368622 1_2:+72365683 Msa0090380:CDS
CTTGGAAAGCAAAGAATAGA+AGG 0.371411 1_2:+72356462 Msa0090380:CDS
GGTAATTCCATTGGTGTTCA+TGG 0.380117 1_2:+72354932 Msa0090380:CDS
CTATTTGTGGCATGTATTTG+TGG 0.387438 1_2:+72355982 Msa0090380:CDS
CTATTTGTGGCATGTATTTG+TGG 0.387438 1_2:+72365203 Msa0090380:CDS
AGCAATGTTGGTGTCCTTGC+AGG 0.392854 1_2:+72360817 Msa0090380:CDS
TTGACAGCAGTTGATAATCT+TGG 0.396343 1_2:+72361690 Msa0090380:CDS
TTGTGTCTTTAGTAAGCATT+TGG 0.401481 1_2:+72356088 Msa0090380:CDS
TTGTGTCTTTAGTAAGCATT+TGG 0.401481 1_2:+72365309 Msa0090380:CDS
TAAGGAGGTTTAGTGTGCTT+TGG 0.411770 1_2:-72355102 None:intergenic
GTGGCATGTATTTGTGGTGT+TGG 0.412454 1_2:+72355988 Msa0090380:CDS
GTGGCATGTATTTGTGGTGT+TGG 0.412454 1_2:+72365209 Msa0090380:CDS
AGATATGTTGATACTATTTG+TGG 0.416529 1_2:+72355969 Msa0090380:CDS
AGATATGTTGATACTATTTG+TGG 0.416529 1_2:+72365190 Msa0090380:CDS
CAAAGAAGCAAAGAAGCAAT+TGG 0.418174 1_2:+72356434 Msa0090380:CDS
ATATAGGGAAGAAGCTGAAA+TGG 0.422458 1_2:+72356626 Msa0090380:CDS
ATATAGGGAAGAAGCTGAAA+TGG 0.422458 1_2:+72362298 Msa0090380:CDS
CTCCGGCGGCTGCCATGATT+AGG 0.422545 1_2:-72364260 None:intergenic
CTATTTGTGGCATGTATTTG+TGG 0.422626 1_2:+72361654 Msa0090380:CDS
AGAGTTAAAGTAAGCATAAG+AGG 0.426460 1_2:-72356180 None:intergenic
AGAGTTAAAGTAAGCATAAG+AGG 0.426460 1_2:-72365401 None:intergenic
ATTGATAATCTTGGTCAGAT+AGG 0.426987 1_2:+72365248 Msa0090380:CDS
ACCACCGTCCGGTGATGGCT+TGG 0.430632 1_2:-72360654 None:intergenic
AGACATGTTGATACTATTTG+TGG 0.431839 1_2:+72361641 Msa0090380:CDS
GTATAATCATCACCTCTTGC+CGG 0.432509 1_2:-72361594 None:intergenic
CAAAGAAGCTAAGAAACAAT+TGG 0.433049 1_2:+72362106 Msa0090380:CDS
CAAAGAAGCTAAGAAACAAT+TGG 0.433049 1_2:+72365655 Msa0090380:CDS
TCATTGAAGAGAACAAGATT+TGG 0.435135 1_2:+72355734 Msa0090380:CDS
TCATTGAAGAGAACAAGATT+TGG 0.435135 1_2:+72364970 Msa0090380:CDS
GGAAGTATAACAAGTCCAAT+TGG 0.435702 1_2:+72362041 Msa0090380:intron
GTACAGAGAAGAAGCTGAAA+TGG 0.437234 1_2:+72365847 Msa0090380:CDS
GCCGGAGCCACCTACATGTT+CGG 0.441437 1_2:+72360712 Msa0090380:CDS
AACACATCTTCCCACCACTT+TGG 0.442991 1_2:-72365113 None:intergenic
AACTCTCTTTGTCTCATGTG+TGG 0.452502 1_2:+72356197 Msa0090380:CDS
AACTCTCTTTGTCTCATGTG+TGG 0.452502 1_2:+72365418 Msa0090380:CDS
TGTTGAACTGAGGTTGTTGT+TGG 0.458257 1_2:-72355833 None:intergenic
TGGTGTTGGTGGAACTTTAA+CGG 0.460287 1_2:+72356002 Msa0090380:CDS
TTATTGAAGAGAACAAGATT+TGG 0.460711 1_2:+72361406 Msa0090380:CDS
AGCAACGTTGGTGTCCTTGC+AGG 0.461948 1_2:+72364381 Msa0090380:CDS
ACTCTCTTTGTCTCATGTGT+GGG 0.462025 1_2:+72356198 Msa0090380:CDS
ACTCTCTTTGTCTCATGTGT+GGG 0.462025 1_2:+72365419 Msa0090380:CDS
TTAAGCACATATAAGCCAAT+TGG 0.462132 1_2:-72362056 None:intergenic
ATTGATAATCTTGGTCAGAT+AGG 0.465696 1_2:+72356027 Msa0090380:CDS
GTTGATAATCTTGGTCAGAT+AGG 0.465696 1_2:+72361699 Msa0090380:CDS
AGAGTCAAAGAAAGCATAAG+AGG 0.471726 1_2:-72361852 None:intergenic
GAAGCTGCATAGAGACCCTT+TGG 0.475496 1_2:-72361918 None:intergenic
TTTCGCCTCCTTCCTAATCA+TGG 0.475895 1_2:+72364248 Msa0090380:CDS
ACCGAACATGTAGGTGGCTC+CGG 0.476564 1_2:-72355041 None:intergenic
ACCGAACATGTAGGTGGCTC+CGG 0.476564 1_2:-72364277 None:intergenic
CCTTCTGTTACTATTTGCAC+TGG 0.477008 1_2:-72355790 None:intergenic
CCTTCTGTTACTATTTGCAC+TGG 0.477008 1_2:-72361462 None:intergenic
TGACATATACAAGAGATATA+GGG 0.477639 1_2:+72356611 Msa0090380:CDS
TGACATATACAAGAGATATA+GGG 0.477639 1_2:+72362283 Msa0090380:CDS
ACCGAACATGTAGGTGGCTC+CGG 0.477927 1_2:-72360713 None:intergenic
TAAGGAGGTTTAGTGTACTT+TGG 0.479046 1_2:-72364338 None:intergenic
CAACGAAATCTCTCCACCTT+GGG 0.480872 1_2:+72360846 Msa0090380:CDS
GACTCTCTTTGTCTCGTGTG+TGG 0.483546 1_2:+72361869 Msa0090380:CDS
ACTCTCTTTGTCTCGTGTGT+GGG 0.489234 1_2:+72361870 Msa0090380:CDS
GCCGGAGCCACCTACATGTT+CGG 0.490142 1_2:+72355040 Msa0090380:CDS
GCCGGAGCCACCTACATGTT+CGG 0.490142 1_2:+72364276 Msa0090380:CDS
CCTTCTGTTACTATTTGCAC+TGG 0.490393 1_2:-72365026 None:intergenic
TAAGGAGGTCTAGTGTGCTT+TGG 0.491975 1_2:-72360774 None:intergenic
AAAATGTTCTGAAACAAATC+CGG 0.495163 1_2:-72361805 None:intergenic
GGAAGTGTAGCAAGTCCACT+TGG 0.498928 1_2:+72356369 Msa0090380:CDS
GGAAGTGTAGCAAGTCCACT+TGG 0.498928 1_2:+72365590 Msa0090380:CDS
GCATGTATTTGTGGTGTTGG+TGG 0.506795 1_2:+72355991 Msa0090380:CDS
GCATGTATTTGTGGTGTTGG+TGG 0.506795 1_2:+72365212 Msa0090380:CDS
TTCCTAATCATGGCAGCCGC+CGG 0.509362 1_2:+72364258 Msa0090380:CDS
GATAGCATTTGGTGTGCCAA+AGG 0.517982 1_2:+72361902 Msa0090380:CDS
CAACGAACTCTATCCACCTT+GGG 0.520279 1_2:+72364410 Msa0090380:CDS
TATTGTATAATCATCACCTC+TGG 0.521894 1_2:-72365147 None:intergenic
GCATGTATTTGTGGTATTGG+TGG 0.523323 1_2:+72361663 Msa0090380:CDS
GCACACCAAATGCTATCAAA+AGG 0.525284 1_2:-72361896 None:intergenic
GACAAACCACCGTCCGGTGA+TGG 0.525568 1_2:-72360659 None:intergenic
GGCAGCTGACATGATTAGAA+AGG 0.528910 1_2:-72360692 None:intergenic
ATAGCATTTGGTGTGCCAAA+GGG 0.533343 1_2:+72361903 Msa0090380:CDS
TTTCTAATCATGTCAGCTGC+CGG 0.534042 1_2:+72360694 Msa0090380:CDS
GGCGGCTGCCATGATTAGAA+AGG 0.534798 1_2:-72355020 None:intergenic
GTTACTATTTGCACTGGTGA+AGG 0.536206 1_2:-72355784 None:intergenic
GTTACTATTTGCACTGGTGA+AGG 0.536206 1_2:-72365020 None:intergenic
AAGAAGCAATTGGAAGCACT+TGG 0.537705 1_2:+72356444 Msa0090380:CDS
AAGAAACAATTGGAAGCACT+TGG 0.542138 1_2:+72362116 Msa0090380:CDS
AAGAAACAATTGGAAGCACT+TGG 0.542138 1_2:+72365665 Msa0090380:CDS
TAGGGAAGAAGCTGAAATGG+TGG 0.542633 1_2:+72356629 Msa0090380:CDS
TAGGGAAGAAGCTGAAATGG+TGG 0.542633 1_2:+72362301 Msa0090380:CDS
ACAGAGGAAGATGACAAAGT+TGG 0.548475 1_2:+72365893 Msa0090380:CDS
GTATAATCATCACCTCTGGC+TGG 0.551037 1_2:-72365143 None:intergenic
CCGTCCGGTGATGGCTTGGA+CGG 0.551701 1_2:-72360650 None:intergenic
AAAGCATAGAATAGAAGGGC+AGG 0.553260 1_2:+72362139 Msa0090380:CDS
TCAACGAAATCTCTCCACCT+TGG 0.557251 1_2:+72360845 Msa0090380:CDS
GGAAGATATGTTCAATCCAC+CGG 0.560480 1_2:+72361575 Msa0090380:CDS
TTTCTAATCATGGCAGCCGC+CGG 0.562727 1_2:+72355022 Msa0090380:CDS
GAAGCTACGTAGAGACCCTC+TGG 0.564193 1_2:-72365467 None:intergenic
TGCAGCGGTAATAATAATGA+AGG 0.565571 1_2:-72365747 None:intergenic
TAATCATCACCTCTGGCTGG+TGG 0.569807 1_2:-72365140 None:intergenic
GGCGGCTGCCATGATTAGGA+AGG 0.570452 1_2:-72364256 None:intergenic
AAAGCAAAGAATAGAAGGGC+AGG 0.570654 1_2:+72356467 Msa0090380:CDS
GTTTGGTTTAAGTGCTGCTG+TGG 0.571063 1_2:+72361347 Msa0090380:CDS
GTTTGGTTTAAGTGCTGCTG+TGG 0.571063 1_2:+72364911 Msa0090380:CDS
GTGCTTAATGTGAAGATCAC+TGG 0.572972 1_2:+72362071 Msa0090380:CDS
GTGCTTAATGTGAAGATCAC+TGG 0.572972 1_2:+72365620 Msa0090380:CDS
GGGCAGGAATTGAATTGTGT+TGG 0.581328 1_2:+72356483 Msa0090380:CDS
GGGCAGGAATTGAATTGTGT+TGG 0.581328 1_2:+72362155 Msa0090380:CDS
CTCACCGTCCAAGCCATCAC+CGG 0.581421 1_2:+72360646 Msa0090380:CDS
TCAATGAAAACAACGGCAAG+TGG 0.581784 1_2:-72355718 None:intergenic
TCAATGAAAACAACGGCAAG+TGG 0.581784 1_2:-72364954 None:intergenic
GTTCGTTGATTAGTCCTGAA+AGG 0.581835 1_2:-72355159 None:intergenic
AACACCAATGGAATTACCTA+CGG 0.584500 1_2:-72354927 None:intergenic
TCCCAAACCATGAACACCAA+TGG 0.584749 1_2:-72354939 None:intergenic
GAAGCTACGTAGAGACCCTC+AGG 0.585366 1_2:-72356246 None:intergenic
GAAAATGACGAACCACCGTC+CGG 0.588466 1_2:-72364229 None:intergenic
TCAACGAACTCTATCCACCT+TGG 0.589582 1_2:+72364409 Msa0090380:CDS
AAAGACTTTGGTAGCAACGT+TGG 0.591191 1_2:+72355133 Msa0090380:intron
AAAGTAAGCATAAGAGGACG+AGG 0.591288 1_2:-72356174 None:intergenic
AAAGAAAGCATAAGAGGACG+AGG 0.591288 1_2:-72361846 None:intergenic
AAAGTAAGCATAAGAGGACG+AGG 0.591288 1_2:-72365395 None:intergenic
GTATGGTTTAAGTGCTGCTG+TGG 0.591609 1_2:+72355675 Msa0090380:CDS
GTGCTTAATGTGAAGATCGC+TGG 0.592619 1_2:+72356399 Msa0090380:intron
GAAGAGTAGTAGTTTCACAC+AGG 0.592988 1_2:+72361320 Msa0090380:CDS
GGGCGTGAATTGAATTGTGT+TGG 0.593657 1_2:+72365704 Msa0090380:CDS
GGAAGAAGCTGAAATGGTGG+AGG 0.594474 1_2:+72356632 Msa0090380:CDS
GGAAGAAGCTGAAATGGTGG+AGG 0.594474 1_2:+72362304 Msa0090380:CDS
TTTCGTTGATTAGTCCTGCA+AGG 0.596687 1_2:-72360831 None:intergenic
CTCACTGTCCAATTCATCAC+CGG 0.597382 1_2:+72364210 Msa0090380:CDS
GGCTGCCATGATTAGGAAGG+AGG 0.603051 1_2:-72364253 None:intergenic
GATAGCATTTGATGTGCCTG+AGG 0.605002 1_2:+72356230 Msa0090380:CDS
GAAGAATAGTAGTTTCACAC+AGG 0.608304 1_2:+72364884 Msa0090380:intron
ATAGCATTTGATGTGCCTGA+GGG 0.610223 1_2:+72356231 Msa0090380:CDS
CAGAGAAGAAGCTGAAATGG+TGG 0.612740 1_2:+72365850 Msa0090380:CDS
ATGTTCAATCCACCGGCAAG+AGG 0.616234 1_2:+72361582 Msa0090380:CDS
GGAGTATAGACCGAACATGT+AGG 0.618153 1_2:-72355050 None:intergenic
GTTCTCTTCAATGAAAACAA+CGG 0.618801 1_2:-72355725 None:intergenic
GTTCTCTTCAATGAAAACAA+CGG 0.618801 1_2:-72364961 None:intergenic
GCACATCAAATGCTATCAGA+AGG 0.619230 1_2:-72365445 None:intergenic
TAATCATCACCTCTTGCCGG+TGG 0.623378 1_2:-72361591 None:intergenic
AGCGACATAAAAGAAACACT+TGG 0.623492 1_2:+72360745 Msa0090380:CDS
GCACATCAAATGCTATCAGA+AGG 0.624152 1_2:-72356224 None:intergenic
GGAGTATAGACCGAACATGT+AGG 0.626603 1_2:-72360722 None:intergenic
CCTATTGTCAAAACTACCCA+TGG 0.627938 1_2:-72355190 None:intergenic
GAAGTGTAGCAAGTCCACTT+GGG 0.630096 1_2:+72356370 Msa0090380:CDS
GAAGTGTAGCAAGTCCACTT+GGG 0.630096 1_2:+72365591 Msa0090380:CDS
GCGGCCGTAGGTAATTCCAT+TGG 0.630516 1_2:+72354923 Msa0090380:CDS
GGCTGCCATGATTAGAAAGG+AGG 0.630867 1_2:-72355017 None:intergenic
AGAAGAAGCTGAAATGGTGG+AGG 0.632991 1_2:+72365853 Msa0090380:CDS
CAACGAACTCTATCCACCAT+GGG 0.634367 1_2:+72355174 Msa0090380:CDS
CCAGTGCAAATAGTAACAGA+AGG 0.634763 1_2:+72355790 Msa0090380:CDS
CCAGTGCAAATAGTAACAGA+AGG 0.634763 1_2:+72361462 Msa0090380:CDS
GATAGCATTTGATGTGCCAG+AGG 0.635342 1_2:+72365451 Msa0090380:CDS
ATGGTGGAGGTAAAGAACGA+GGG 0.640025 1_2:+72362317 Msa0090380:CDS
TACATGTTCGGTCTATACTC+CGG 0.641076 1_2:+72364288 Msa0090380:CDS
CCAGTGCAAATAGTAACAGA+AGG 0.641583 1_2:+72365026 Msa0090380:CDS
CAGCAGAGGTTGTTGAACTG+AGG 0.642991 1_2:-72355843 None:intergenic
ATAGCATTTGATGTGCCAGA+GGG 0.644810 1_2:+72365452 Msa0090380:CDS
TCAACGAACTCTATCCACCA+TGG 0.645821 1_2:+72355173 Msa0090380:CDS
TTGGAAAGCAAAGAATAGAA+GGG 0.645826 1_2:+72356463 Msa0090380:CDS
CTCACCGTCCAATTCATCAC+CGG 0.647057 1_2:+72354974 Msa0090380:CDS
GGAGTATAGACCGAACATGT+AGG 0.649476 1_2:-72364286 None:intergenic
GAACATGTAGGTGGCTCCGG+CGG 0.649974 1_2:-72355038 None:intergenic
GAACATGTAGGTGGCTCCGG+CGG 0.649974 1_2:-72364274 None:intergenic
TTGGAAAGCATAGAATAGAA+GGG 0.652646 1_2:+72362135 Msa0090380:CDS
TTGGAAAGCATAGAATAGAA+GGG 0.653057 1_2:+72365684 Msa0090380:CDS
ATTGTCAAAACTACCCATGG+TGG 0.655386 1_2:-72355187 None:intergenic
CCTATTGCTAAAACTACCCA+AGG 0.655732 1_2:-72360862 None:intergenic
TTAAGCACATATAACCCAAG+TGG 0.655955 1_2:-72356384 None:intergenic
TTAAGCACATATAACCCAAG+TGG 0.655955 1_2:-72365605 None:intergenic
CCGTCCAAGCCATCACCGGA+CGG 0.660584 1_2:+72360650 Msa0090380:CDS
CTGTCCAATTCATCACCGGA+CGG 0.661899 1_2:+72364214 Msa0090380:CDS
ACAAAGGTGACATATACAAG+AGG 0.662424 1_2:+72365825 Msa0090380:CDS
GTTCGTTGACTAGTCCTGCA+AGG 0.663578 1_2:-72364395 None:intergenic
ATTGTTAAAACTACCCAAGG+TGG 0.665582 1_2:-72364423 None:intergenic
AGTTGGTCAACAGCAGCATG+TGG 0.667095 1_2:+72365910 Msa0090380:CDS
AAGAGTAGTAGTTTCACACA+GGG 0.669994 1_2:+72361321 Msa0090380:CDS
GTGTTCAATCCACCAGCCAG+AGG 0.678931 1_2:+72365131 Msa0090380:CDS
GACTGAAACTGAAACAGCAG+AGG 0.678973 1_2:-72355857 None:intergenic
CCGTCCGGTGATGAATTGGA+CGG 0.681338 1_2:-72354978 None:intergenic
TCCAAGCCATCACCGGACGG+TGG 0.681683 1_2:+72360653 Msa0090380:CDS
CACAAAACTATGGCGGCCGT+AGG 0.686030 1_2:+72354911 None:intergenic
AAAGAACGTGGAAAAGACAG+AGG 0.686229 1_2:+72365877 Msa0090380:CDS
GTATAGACCGAACATGTAGG+TGG 0.686930 1_2:-72360719 None:intergenic
CCGTCCAATTCATCACCGGA+CGG 0.687213 1_2:+72354978 Msa0090380:CDS
TCCAATTCATCACCGGACGG+TGG 0.689064 1_2:+72364217 Msa0090380:CDS
GTATAGACCGAACATGTAGG+TGG 0.689369 1_2:-72355047 None:intergenic
GTATAGACCGAACATGTAGG+TGG 0.689369 1_2:-72364283 None:intergenic
TCCAATTCATCACCGGACGG+TGG 0.690622 1_2:+72354981 Msa0090380:CDS
ATTGCTAAAACTACCCAAGG+TGG 0.696114 1_2:-72360859 None:intergenic
AAGAATAGTAGTTTCACACA+GGG 0.699884 1_2:+72364885 Msa0090380:CDS
AATGGTGGAGGTAAAGAACG+AGG 0.714318 1_2:+72362316 Msa0090380:CDS
AATGGTGGAGGTAAAGAACG+TGG 0.730173 1_2:+72365865 Msa0090380:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTGATCTTTTTTAAAATT+TGG + chr1_2:72359644-72359663 Msa0090380:intron 10.0%
!!! TTGAGATTTAATTTATATTT+GGG - chr1_2:72359677-72359696 None:intergenic 10.0%
!!! TTTGAGATTTAATTTATATT+TGG - chr1_2:72359678-72359697 None:intergenic 10.0%
!!! ATTTATTTATCAAATTTTGT+TGG + chr1_2:72363804-72363823 Msa0090380:intron 10.0%
!!! AGTAAAATTTGTTTTATTTT+GGG - chr1_2:72363987-72364006 None:intergenic 10.0%
!!! TAGTAAAATTTGTTTTATTT+TGG - chr1_2:72363988-72364007 None:intergenic 10.0%
!!! ATTTTACTAATTAATATTGA+TGG + chr1_2:72363999-72364018 Msa0090380:intron 10.0%
!!! ATAATATTTTTGTATATTGT+TGG - chr1_2:72364141-72364160 None:intergenic 10.0%
!! AACAATATACAAAAATATTA+TGG + chr1_2:72364140-72364159 Msa0090380:intron 10.0%
!!! TATGCAACTTTATATAATTT+TGG + chr1_2:72356348-72356367 Msa0090380:CDS 15.0%
!!! AATCTGTTCATTTTTTTTTT+TGG + chr1_2:72357344-72357363 Msa0090380:intron 15.0%
!!! TTAATCTGTTCATTTTTAAT+AGG + chr1_2:72357410-72357429 Msa0090380:intron 15.0%
!! AACATGATCATAATAAAATT+CGG + chr1_2:72357434-72357453 Msa0090380:intron 15.0%
!!! TCATGAGTTTTTTTTTTTTT+AGG + chr1_2:72357843-72357862 Msa0090380:intron 15.0%
!!! GTTTTATTTTAAGGTAAATT+TGG - chr1_2:72358739-72358758 None:intergenic 15.0%
!!! AACTTTAGAAATTCATTTAT+GGG - chr1_2:72358815-72358834 None:intergenic 15.0%
!!! AAACTTTAGAAATTCATTTA+TGG - chr1_2:72358816-72358835 None:intergenic 15.0%
!!! ATTTTTAGACTAAGATATAT+GGG - chr1_2:72359503-72359522 None:intergenic 15.0%
!!! AATTTTTAGACTAAGATATA+TGG - chr1_2:72359504-72359523 None:intergenic 15.0%
!! GAAATCAAAGATATATAATT+TGG + chr1_2:72359785-72359804 Msa0090380:intron 15.0%
!! TCTTTGAATAAAAGATAATT+TGG + chr1_2:72359824-72359843 Msa0090380:intron 15.0%
!! TTCATATTTATACTTAATTG+TGG - chr1_2:72362446-72362465 None:intergenic 15.0%
!!! TCATATTTACACTTTTTTAA+GGG - chr1_2:72362474-72362493 None:intergenic 15.0%
!!! TTCATATTTACACTTTTTTA+AGG - chr1_2:72362475-72362494 None:intergenic 15.0%
!!! TTTTCTATATCTATCTAAAA+AGG + chr1_2:72362517-72362536 Msa0090380:intron 15.0%
!! TTTCTATATCTATCTAAAAA+GGG + chr1_2:72362518-72362537 Msa0090380:intron 15.0%
!! AAACAAAATAGTTTAAATGA+AGG - chr1_2:72362585-72362604 None:intergenic 15.0%
!!! GATTTAAATTTTTATTGTAG+TGG - chr1_2:72362665-72362684 None:intergenic 15.0%
!! TATGATTCTAATATCTTAAA+AGG - chr1_2:72363039-72363058 None:intergenic 15.0%
!! ATGAAAATGAATAGAATAAA+TGG - chr1_2:72363177-72363196 None:intergenic 15.0%
!! TTAATATATCATAAAGATCA+TGG + chr1_2:72363219-72363238 Msa0090380:intron 15.0%
!! AATATACAAAAATATTATGG+CGG + chr1_2:72364143-72364162 Msa0090380:intron 15.0%
!! AATTTCTTGTATATTTCACT+TGG + chr1_2:72355589-72355608 Msa0090380:intron 20.0%
!!! GTAATAATTGGATTTTGTTT+TGG + chr1_2:72356270-72356289 Msa0090380:CDS 20.0%
!!! TTTTTTTTTAAATCAGTGTC+CGG - chr1_2:72357129-72357148 None:intergenic 20.0%
!! ATCTAAATAAGTCATAACTT+CGG - chr1_2:72357314-72357333 None:intergenic 20.0%
!!! TTTTTTTTTTGGTACAAAAG+AGG + chr1_2:72357355-72357374 Msa0090380:intron 20.0%
!!! TTTTTTTTTGGTACAAAAGA+GGG + chr1_2:72357356-72357375 Msa0090380:intron 20.0%
!!! TTTTAACTTATTGACACATA+AGG + chr1_2:72357486-72357505 Msa0090380:intron 20.0%
!!! TGAGTTTTTTTTTTTTTAGG+TGG + chr1_2:72357846-72357865 Msa0090380:intron 20.0%
!!! CATTTCATTTTTTTTCAAAG+TGG + chr1_2:72358382-72358401 Msa0090380:intron 20.0%
!! CAATAAATTTACTTCATTGT+TGG + chr1_2:72358635-72358654 Msa0090380:intron 20.0%
!! GAATATATCATAAGTTATGT+GGG - chr1_2:72358707-72358726 None:intergenic 20.0%
!! TGAATATATCATAAGTTATG+TGG - chr1_2:72358708-72358727 None:intergenic 20.0%
!!! TTTTCTGAAACAAAGTTTTT+TGG + chr1_2:72358855-72358874 Msa0090380:intron 20.0%
!! CATTATTGAGACAATTTATA+TGG - chr1_2:72358886-72358905 None:intergenic 20.0%
!!! TTTTTAGACTAAGATATATG+GGG - chr1_2:72359502-72359521 None:intergenic 20.0%
!!! ACGTAAATATGAATTTTTTG+TGG - chr1_2:72359590-72359609 None:intergenic 20.0%
!!! TTATATATCTTTGATTTCTG+AGG - chr1_2:72359783-72359802 None:intergenic 20.0%
!! TTCCAAATACATCTAAAAAT+AGG - chr1_2:72359933-72359952 None:intergenic 20.0%
!!! ATTTTGTCAAAAAGAATCAT+GGG + chr1_2:72360118-72360137 Msa0090380:intron 20.0%
!!! TTTTTCTTTGTTGTAATTGT+CGG + chr1_2:72360268-72360287 Msa0090380:intron 20.0%
!!! CAAAATCTTTGAAAAAACTA+AGG - chr1_2:72360795-72360814 None:intergenic 20.0%
!!! CTTAGTTTTTTCAAAGATTT+TGG + chr1_2:72360793-72360812 Msa0090380:CDS 20.0%
!! TATTTATTATGATGACTCAA+AGG + chr1_2:72361128-72361147 Msa0090380:intron 20.0%
!!! GTAAGTATTTGGAATTATTT+AGG + chr1_2:72361771-72361790 Msa0090380:intron 20.0%
!!! TATGCAACTTTGTATAATTT+TGG + chr1_2:72362020-72362039 Msa0090380:intron 20.0%
!! GGATAAAATTGAAAATGAAA+AGG - chr1_2:72362564-72362583 None:intergenic 20.0%
!! TCCACGATAAATAATATTAT+GGG + chr1_2:72363267-72363286 Msa0090380:intron 20.0%
!! GTGTGTATGTATATATATAA+AGG + chr1_2:72363881-72363900 Msa0090380:intron 20.0%
!!! CAAAATCTTTGAAAAAACTA+AGG - chr1_2:72360795-72360814 None:intergenic 20.0%
!!! CTTAGTTTTTTCAAAGATTT+TGG + chr1_2:72360793-72360812 Msa0090380:CDS 20.0%
!!! TTTTTGGTTACTTTATGATT+TGG + chr1_2:72364463-72364482 Msa0090380:intron 20.0%
!!! TTACTTTATGATTTGGTTAT+CGG + chr1_2:72364470-72364489 Msa0090380:intron 20.0%
!! TATTTATTATGATGACACAA+AGG + chr1_2:72364692-72364711 Msa0090380:intron 20.0%
!!! GTAATAATTGGATTTTGTTT+TGG + chr1_2:72356270-72356289 Msa0090380:CDS 20.0%
!!! TATGCAACTTTGTATAATTT+TGG + chr1_2:72362020-72362039 Msa0090380:intron 20.0%
!! CAAAGTCTTTGAAAAAACTA+AGG - chr1_2:72355123-72355142 None:intergenic 25.0%
!!! CTTAGTTTTTTCAAAGACTT+TGG + chr1_2:72355121-72355140 Msa0090380:intron 25.0%
! ATGTGTCTTTACATTTGTAT+AGG + chr1_2:72355292-72355311 Msa0090380:intron 25.0%
! TATTTACTATGATGACACAA+AGG + chr1_2:72355456-72355475 Msa0090380:intron 25.0%
!!! AAGGCTTTGATTTTGTTTAT+AGG + chr1_2:72355475-72355494 Msa0090380:intron 25.0%
!!! CTTTGATTTTGTTTATAGGT+TGG + chr1_2:72355479-72355498 Msa0090380:intron 25.0%
! TATGATCATAATTCAGAAGA+AGG + chr1_2:72355633-72355652 Msa0090380:intron 25.0%
!! ACCATTTTGGATCTTTTTTT+GGG - chr1_2:72355882-72355901 None:intergenic 25.0%
! AAAAAAAGATCCAAAATGGT+GGG + chr1_2:72355882-72355901 Msa0090380:CDS 25.0%
! AGATATGTTGATACTATTTG+TGG + chr1_2:72355969-72355988 Msa0090380:CDS 25.0%
! GATATAATGGCAAAAAGTAA+TGG - chr1_2:72356306-72356325 None:intergenic 25.0%
!! CCATTATATCAGAACTTTTT+GGG + chr1_2:72356316-72356335 Msa0090380:CDS 25.0%
! TGACATATACAAGAGATATA+GGG + chr1_2:72356611-72356630 Msa0090380:CDS 25.0%
! ATCCATGTTAAGTAATGTAT+TGG + chr1_2:72357232-72357251 Msa0090380:intron 25.0%
!!! AAGCTTCTTAGTTTTCTTTT+GGG - chr1_2:72357389-72357408 None:intergenic 25.0%
! CAATATACATGGTCATTAAT+GGG - chr1_2:72357608-72357627 None:intergenic 25.0%
! TCAATATACATGGTCATTAA+TGG - chr1_2:72357609-72357628 None:intergenic 25.0%
!! TTCTTTTGTGTCAATATACA+TGG - chr1_2:72357619-72357638 None:intergenic 25.0%
!! TTTCTGCAGAAATACAATTT+TGG - chr1_2:72357708-72357727 None:intergenic 25.0%
! ATATAGACATACTTCACTTT+AGG - chr1_2:72357747-72357766 None:intergenic 25.0%
!!! GAACTTTTTCTTTAACAACA+AGG + chr1_2:72357940-72357959 Msa0090380:intron 25.0%
! GCAATATTTAAAGAGAACAA+AGG - chr1_2:72358216-72358235 None:intergenic 25.0%
!!! TTTTTTTCAAAGTGGTTCTT+AGG + chr1_2:72358390-72358409 Msa0090380:intron 25.0%
!!! TTTTTTCAAAGTGGTTCTTA+GGG + chr1_2:72358391-72358410 Msa0090380:intron 25.0%
! CAATGAAGTAAATTTATTGC+AGG - chr1_2:72358634-72358653 None:intergenic 25.0%
!!! GATCATCTCGTTTTATTTTA+AGG - chr1_2:72358748-72358767 None:intergenic 25.0%
! GATGATCACTTGATAAAATT+CGG + chr1_2:72358761-72358780 Msa0090380:intron 25.0%
!! CTTTGTTTCAGAAAATTCAA+AGG - chr1_2:72358850-72358869 None:intergenic 25.0%
!! GTAAAGATTGTGTTTCTAAA+TGG - chr1_2:72358912-72358931 None:intergenic 25.0%
!! TTTCTTTGATAGACTCTTTT+AGG - chr1_2:72358986-72359005 None:intergenic 25.0%
! GAAAGTCTCTTTATATTCAA+TGG + chr1_2:72359013-72359032 Msa0090380:intron 25.0%
! GAAAGTCTCTTTATATTCAA+TGG + chr1_2:72359013-72359032 Msa0090380:intron 25.0%
!! AAAATCCAAATTCTAAAAGG+TGG - chr1_2:72359309-72359328 None:intergenic 25.0%
! TGGAAAATCCAAATTCTAAA+AGG - chr1_2:72359312-72359331 None:intergenic 25.0%
!! TTTATTTCTCTATGAACATG+AGG - chr1_2:72359368-72359387 None:intergenic 25.0%
!! TTTGCACTCTTTTTCTTTTT+TGG - chr1_2:72359394-72359413 None:intergenic 25.0%
! TTAGAATAAAATCCATCTGT+TGG + chr1_2:72359522-72359541 Msa0090380:intron 25.0%
! GAATAAAAGATAATTTGGCT+AGG + chr1_2:72359829-72359848 Msa0090380:intron 25.0%
!!! GTCCTATTTTTAGATGTATT+TGG + chr1_2:72359928-72359947 Msa0090380:intron 25.0%
! TTTGGAAGTTAATCTTAAAG+TGG + chr1_2:72359946-72359965 Msa0090380:intron 25.0%
!! GATTTTGTCAAAAAGAATCA+TGG + chr1_2:72360117-72360136 Msa0090380:intron 25.0%
! AAAACAATGTTTCAAGACAT+TGG + chr1_2:72360187-72360206 Msa0090380:intron 25.0%
!! TTACTCTTGTACATTTTTCT+TGG + chr1_2:72360314-72360333 Msa0090380:intron 25.0%
!! TACTCTTGTACATTTTTCTT+GGG + chr1_2:72360315-72360334 Msa0090380:intron 25.0%
! ATTATTCTCAATTGAGGATT+AGG + chr1_2:72360338-72360357 Msa0090380:intron 25.0%
! ATTATAACCAACTAGATTGA+TGG + chr1_2:72360407-72360426 Msa0090380:intron 25.0%
! AAGTTCCTTAAAACCAATAA+TGG - chr1_2:72360502-72360521 None:intergenic 25.0%
!! AATCTTTGAAAAAACTAAGG+AGG - chr1_2:72360792-72360811 None:intergenic 25.0%
!!! TCTTGCAGTTTTTTTTGTTA+TGG - chr1_2:72360929-72360948 None:intergenic 25.0%
! TTATTGAAGAGAACAAGATT+TGG + chr1_2:72361406-72361425 Msa0090380:CDS 25.0%
!! ACCATTTTGGATCTTTTTTT+GGG - chr1_2:72355882-72355901 None:intergenic 25.0%
! AAAAAAAGATCCAAAATGGT+GGG + chr1_2:72355882-72355901 Msa0090380:CDS 25.0%
! TTGTGTCTTTAGTAAGTATT+TGG + chr1_2:72361760-72361779 Msa0090380:intron 25.0%
!!! AAAATGTTCTGAAACAAATC+CGG - chr1_2:72361808-72361827 None:intergenic 25.0%
! GATATAATGGCAAAAAGTAA+TGG - chr1_2:72356306-72356325 None:intergenic 25.0%
!! TCCAAAAAGTTCTGATATAA+TGG - chr1_2:72361991-72362010 None:intergenic 25.0%
! TGACATATACAAGAGATATA+GGG + chr1_2:72356611-72356630 Msa0090380:CDS 25.0%
! CTACGAAATCTCATTAAAAT+AGG + chr1_2:72362632-72362651 Msa0090380:intron 25.0%
! CAAAAATAAGTCAATATTCC+CGG + chr1_2:72362876-72362895 Msa0090380:intron 25.0%
!! TAATGCCTTAAAATTTTGGA+TGG - chr1_2:72362929-72362948 None:intergenic 25.0%
!!! ATCCAAAATTTTAAGGCATT+AGG + chr1_2:72362928-72362947 Msa0090380:intron 25.0%
!! TACCTAATGCCTTAAAATTT+TGG - chr1_2:72362933-72362952 None:intergenic 25.0%
! GAGGATGATAATATCTTAAA+AGG - chr1_2:72363129-72363148 None:intergenic 25.0%
! CTCCACGATAAATAATATTA+TGG + chr1_2:72363266-72363285 Msa0090380:intron 25.0%
! CCACGATAAATAATATTATG+GGG + chr1_2:72363268-72363287 Msa0090380:intron 25.0%
! GAGAATAAAAACATGAACTT+TGG - chr1_2:72363386-72363405 None:intergenic 25.0%
!!! ACTTACCACCATATTTTTTT+GGG - chr1_2:72363429-72363448 None:intergenic 25.0%
!! AATCTTTGAAAAAACTAAGG+AGG - chr1_2:72360792-72360811 None:intergenic 25.0%
!!! TTTTGGTCTTGCTATTTTTT+TGG - chr1_2:72364499-72364518 None:intergenic 25.0%
! ATGTGTCTTTACATTTGTAT+AGG + chr1_2:72355292-72355311 Msa0090380:intron 25.0%
!!! AAGGCTTTGATTTTGTTTAT+TGG + chr1_2:72355475-72355494 Msa0090380:intron 25.0%
!!! CTTTGATTTTGTTTATTGGT+TGG + chr1_2:72364715-72364734 Msa0090380:intron 25.0%
! AATTTCTTGTATGTTTCACT+TGG + chr1_2:72364825-72364844 Msa0090380:intron 25.0%
! AGATATGTTGATACTATTTG+TGG + chr1_2:72355969-72355988 Msa0090380:CDS 25.0%
! GATATAATGGCAAAAAGTAA+TGG - chr1_2:72356306-72356325 None:intergenic 25.0%
!! CCATTATATCAGAACTTTTT+GGG + chr1_2:72356316-72356335 Msa0090380:CDS 25.0%
!!! AAGTGTTGTTTTTATGTCTG+GGG - chr1_2:72355074-72355093 None:intergenic 30.0%
!!! CAAGTGTTGTTTTTATGTCT+GGG - chr1_2:72355075-72355094 None:intergenic 30.0%
! AGTCTTTGAAAAAACTAAGG+AGG - chr1_2:72355120-72355139 None:intergenic 30.0%
TCTTTGGTTACTTCATGATT+TGG + chr1_2:72355227-72355246 Msa0090380:CDS 30.0%
!!! TTGTGGTCTTGCTATTTTTT+TGG - chr1_2:72355263-72355282 None:intergenic 30.0%
TACTTGTGTTAAGAATTTCC+CGG + chr1_2:72355354-72355373 Msa0090380:intron 30.0%
AACAGGTTTCATATATCGAA+TGG - chr1_2:72355539-72355558 None:intergenic 30.0%
TTCGACAAGTTAATGAACTT+AGG + chr1_2:72355557-72355576 Msa0090380:intron 30.0%
TCGACAAGTTAATGAACTTA+GGG + chr1_2:72355558-72355577 Msa0090380:intron 30.0%
GTTCTCTTCAATGAAAACAA+CGG - chr1_2:72355728-72355747 None:intergenic 30.0%
TCATTGAAGAGAACAAGATT+TGG + chr1_2:72355734-72355753 Msa0090380:CDS 30.0%
TCCCAAAAAAAGATCCAAAA+TGG + chr1_2:72355878-72355897 Msa0090380:CDS 30.0%
! CACCATTTTGGATCTTTTTT+TGG - chr1_2:72355883-72355902 None:intergenic 30.0%
CAAAAAAAGATCCAAAATGG+TGG + chr1_2:72355881-72355900 Msa0090380:CDS 30.0%
! TTAACGGCAATTGATAATCT+TGG + chr1_2:72356018-72356037 Msa0090380:CDS 30.0%
! ATTGATAATCTTGGTCAGAT+AGG + chr1_2:72356027-72356046 Msa0090380:CDS 30.0%
!! AAAGTGCTTATGCTTTTCTT+TGG - chr1_2:72356069-72356088 None:intergenic 30.0%
TTGTGTCTTTAGTAAGCATT+TGG + chr1_2:72356088-72356107 Msa0090380:CDS 30.0%
! GTAAGCATTTGGAATTATCT+AGG + chr1_2:72356099-72356118 Msa0090380:CDS 30.0%
AGAGTTAAAGTAAGCATAAG+AGG - chr1_2:72356183-72356202 None:intergenic 30.0%
TACGTAGCTTCAGTAATAAT+TGG + chr1_2:72356258-72356277 Msa0090380:CDS 30.0%
! GCCATTATATCAGAACTTTT+TGG + chr1_2:72356315-72356334 Msa0090380:CDS 30.0%
! CCCAAAAAGTTCTGATATAA+TGG - chr1_2:72356319-72356338 None:intergenic 30.0%
TTGGAAAGCAAAGAATAGAA+GGG + chr1_2:72356463-72356482 Msa0090380:CDS 30.0%
!!! ATTACAGCTGCAACATTTTT+TGG + chr1_2:72356537-72356556 Msa0090380:CDS 30.0%
!!! TGCTGTTGTTTCACTTATTT+TGG + chr1_2:72356560-72356579 Msa0090380:CDS 30.0%
!!! TGTTGTTTCACTTATTTTGG+TGG + chr1_2:72356563-72356582 Msa0090380:CDS 30.0%
GTGACATATACAAGAGATAT+AGG + chr1_2:72356610-72356629 Msa0090380:CDS 30.0%
CAACTTAGAATTAGGACAAA+TGG + chr1_2:72356715-72356734 Msa0090380:intron 30.0%
AGAATTAGGACAAATGGTTA+AGG + chr1_2:72356721-72356740 Msa0090380:intron 30.0%
TGTGCTAACAATTATTCTGT+TGG + chr1_2:72357010-72357029 Msa0090380:intron 30.0%
!! AAATTGGTTCGTTGGATTAA+CGG + chr1_2:72357095-72357114 Msa0090380:intron 30.0%
CACCAATACATTACTTAACA+TGG - chr1_2:72357237-72357256 None:intergenic 30.0%
TAACTTCGGAGTTGAAATAT+TGG - chr1_2:72357300-72357319 None:intergenic 30.0%
!! GAAGCTTCTTAGTTTTCTTT+TGG - chr1_2:72357390-72357409 None:intergenic 30.0%
AAAATTCGGAATCAACCAAA+AGG + chr1_2:72357448-72357467 Msa0090380:intron 30.0%
AAATTCGGAATCAACCAAAA+GGG + chr1_2:72357449-72357468 Msa0090380:intron 30.0%
!! TGTTTGATTTTTGTCCCTTT+TGG - chr1_2:72357466-72357485 None:intergenic 30.0%
AATGCGTAACTATAAGATTG+TGG - chr1_2:72357556-72357575 None:intergenic 30.0%
TGGGTTTAATTAGCTCATAT+GGG - chr1_2:72357589-72357608 None:intergenic 30.0%
ATGGGTTTAATTAGCTCATA+TGG - chr1_2:72357590-72357609 None:intergenic 30.0%
ATTGACACAAAAGAATGACA+TGG + chr1_2:72357624-72357643 Msa0090380:intron 30.0%
TCACTTTAGGTAAGGTTTAA+GGG - chr1_2:72357734-72357753 None:intergenic 30.0%
TTCACTTTAGGTAAGGTTTA+AGG - chr1_2:72357735-72357754 None:intergenic 30.0%
! TTTTGTGACAGTAAATCAAC+AGG - chr1_2:72358022-72358041 None:intergenic 30.0%
AATTGCGAAACTTTGTTACA+GGG - chr1_2:72358098-72358117 None:intergenic 30.0%
! TATAGTGTCTCTGATTTTGT+TGG - chr1_2:72358146-72358165 None:intergenic 30.0%
! TTTCTTATGCATCGACAATT+GGG - chr1_2:72358355-72358374 None:intergenic 30.0%
! ATTTCTTATGCATCGACAAT+TGG - chr1_2:72358356-72358375 None:intergenic 30.0%
ATGTCTTCGTCATATAAAAC+CGG + chr1_2:72358666-72358685 Msa0090380:intron 30.0%
TGAACTTCGATTATATCTGA+TGG - chr1_2:72358937-72358956 None:intergenic 30.0%
AAAGAGTCTATCAAAGAAAC+CGG + chr1_2:72358987-72359006 Msa0090380:intron 30.0%
ATATAAAGAGACTTTCTCTC+CGG - chr1_2:72359009-72359028 None:intergenic 30.0%
ATATAAAGAGACTTTCTCTC+CGG - chr1_2:72359009-72359028 None:intergenic 30.0%
GGTGTGAAACTCAATATTTA+AGG - chr1_2:72359235-72359254 None:intergenic 30.0%
!!! TTGATCCACCTTTTAGAATT+TGG + chr1_2:72359301-72359320 Msa0090380:intron 30.0%
ACACAAGCAAGTAAATAGAA+AGG + chr1_2:72359546-72359565 Msa0090380:intron 30.0%
! ATGTTTCAAGACATTGGTTA+TGG + chr1_2:72360193-72360212 Msa0090380:intron 30.0%
GTTATGGTCTAAATCATTTG+TGG + chr1_2:72360209-72360228 Msa0090380:intron 30.0%
ACACATGAAATCACTCAATT+GGG - chr1_2:72360240-72360259 None:intergenic 30.0%
TACACATGAAATCACTCAAT+TGG - chr1_2:72360241-72360260 None:intergenic 30.0%
!!! TTGTTGTAATTGTCGGTTTT+TGG + chr1_2:72360275-72360294 Msa0090380:intron 30.0%
! GATTAGGTGATTTGTATCTT+AGG + chr1_2:72360354-72360373 Msa0090380:intron 30.0%
TGCATATGAAGAAAACGATA+TGG - chr1_2:72360449-72360468 None:intergenic 30.0%
!! ACAAATAAGAGCACCATTAT+TGG + chr1_2:72360486-72360505 Msa0090380:intron 30.0%
GTGATACTGTATAAATGAGA+TGG - chr1_2:72360528-72360547 None:intergenic 30.0%
ATCCAAGTAAATATGGCAAT+TGG + chr1_2:72360595-72360614 Msa0090380:intron 30.0%
!! AAAGATTTTGGTAGCAATGT+TGG + chr1_2:72360805-72360824 Msa0090380:CDS 30.0%
! GGTGCTATACTTAATTTCTT+TGG + chr1_2:72360883-72360902 Msa0090380:intron 30.0%
TCTTTGGTTACTTCATGATT+TGG + chr1_2:72355227-72355246 Msa0090380:CDS 30.0%
ATGTGTCTTTACATTTGCAT+AGG + chr1_2:72360964-72360983 Msa0090380:intron 30.0%
! GGAATTCTAAAAGGATATCT+TGG + chr1_2:72361069-72361088 Msa0090380:intron 30.0%
!! AAGGCTTTGATTTTGCTTAT+AGG + chr1_2:72361147-72361166 Msa0090380:intron 30.0%
!! CTTTGATTTTGCTTATAGGT+TGG + chr1_2:72361151-72361170 Msa0090380:intron 30.0%
CAATAAAAACAACAGCAAGT+GGG - chr1_2:72361392-72361411 None:intergenic 30.0%
TCAATAAAAACAACAGCAAG+TGG - chr1_2:72361393-72361412 None:intergenic 30.0%
TCCCAAAAAAAGATCCAAAA+TGG + chr1_2:72355878-72355897 Msa0090380:CDS 30.0%
! CACCATTTTGGATCTTTTTT+TGG - chr1_2:72355883-72355902 None:intergenic 30.0%
CAAAAAAAGATCCAAAATGG+TGG + chr1_2:72355881-72355900 Msa0090380:CDS 30.0%
AGACATGTTGATACTATTTG+TGG + chr1_2:72361641-72361660 Msa0090380:CDS 30.0%
!! AAAGTGCTTATGCTTTTCTT+TGG - chr1_2:72356069-72356088 None:intergenic 30.0%
!! GTGATTATCGGATTTTGTTT+TGG + chr1_2:72361942-72361961 Msa0090380:CDS 30.0%
! GCCATTATATCAGAACTTTT+TGG + chr1_2:72356315-72356334 Msa0090380:CDS 30.0%
TTAAGCACATATAAGCCAAT+TGG - chr1_2:72362059-72362078 None:intergenic 30.0%
CAAAGAAGCTAAGAAACAAT+TGG + chr1_2:72362106-72362125 Msa0090380:CDS 30.0%
! TTGGAAAGCATAGAATAGAA+GGG + chr1_2:72362135-72362154 Msa0090380:CDS 30.0%
!! TGCTGTTGTTAACCTTATTT+TGG + chr1_2:72362232-72362251 Msa0090380:CDS 30.0%
!!! TGTTGTTAACCTTATTTTGG+TGG + chr1_2:72362235-72362254 Msa0090380:CDS 30.0%
! AGGACAAGAAAGTTTTACAA+AGG + chr1_2:72362260-72362279 Msa0090380:CDS 30.0%
GTGACATATACAAGAGATAT+AGG + chr1_2:72356610-72356629 Msa0090380:CDS 30.0%
! TAAAATTTTGGATGGAGATG+TGG - chr1_2:72362921-72362940 None:intergenic 30.0%
! CATCTCCATCCAAAATTTTA+AGG + chr1_2:72362921-72362940 Msa0090380:intron 30.0%
GCTATAAATGTGCAAAATGT+TGG - chr1_2:72362979-72362998 None:intergenic 30.0%
TAGAATCATAATATCCACCA+TGG + chr1_2:72363049-72363068 Msa0090380:intron 30.0%
AATATCATGTTGAGAATCCA+TGG - chr1_2:72363069-72363088 None:intergenic 30.0%
TAGAATCATAATATCCACCA+TGG + chr1_2:72363049-72363068 Msa0090380:intron 30.0%
ACAACAAAGATAGAATGAAG+AGG - chr1_2:72363148-72363167 None:intergenic 30.0%
CCCCATAATATTATTTATCG+TGG - chr1_2:72363271-72363290 None:intergenic 30.0%
TAGTAAACCTTTCACTAGAA+AGG - chr1_2:72363312-72363331 None:intergenic 30.0%
! TGACTATTTCTTTGTTTCAC+AGG + chr1_2:72363353-72363372 Msa0090380:intron 30.0%
TTCATGCTCCCAAAAAAATA+TGG + chr1_2:72363418-72363437 Msa0090380:intron 30.0%
!!! GACTTACCACCATATTTTTT+TGG - chr1_2:72363430-72363449 None:intergenic 30.0%
! GTGGTAAGTCTCTTTAATTT+AGG + chr1_2:72363440-72363459 Msa0090380:intron 30.0%
! TCTCTTTAATTTAGGTGTCA+AGG + chr1_2:72363448-72363467 Msa0090380:intron 30.0%
CTAATTTCTACTGTAAAGTG+AGG - chr1_2:72363565-72363584 None:intergenic 30.0%
! CTTTTTGCAACCTTTTGTAA+AGG + chr1_2:72363697-72363716 Msa0090380:intron 30.0%
TTTAGTCAACAAGATTGTCA+TGG - chr1_2:72363849-72363868 None:intergenic 30.0%
CAATTAAATAGAGAGAGAGA+GGG - chr1_2:72364043-72364062 None:intergenic 30.0%
TCAATTAAATAGAGAGAGAG+AGG - chr1_2:72364044-72364063 None:intergenic 30.0%
TACAAAAATATTATGGCGGT+TGG + chr1_2:72364147-72364166 Msa0090380:intron 30.0%
!!! AAGTGTTGTTTTTATGTCAC+CGG - chr1_2:72364310-72364329 None:intergenic 30.0%
!!! GGTGCTATACTAAACTTTTT+TGG + chr1_2:72364447-72364466 Msa0090380:intron 30.0%
AAATAGCAAGACCAAAAGTT+TGG + chr1_2:72364502-72364521 Msa0090380:intron 30.0%
AACAGGTTTCATATATCGAA+TGG - chr1_2:72355539-72355558 None:intergenic 30.0%
AAGAATAGTAGTTTCACACA+GGG + chr1_2:72364885-72364904 Msa0090380:CDS 30.0%
GTTCTCTTCAATGAAAACAA+CGG - chr1_2:72355728-72355747 None:intergenic 30.0%
TCATTGAAGAGAACAAGATT+TGG + chr1_2:72355734-72355753 Msa0090380:CDS 30.0%
AAAAAAAGATCCAAAGTGGT+GGG + chr1_2:72365103-72365122 Msa0090380:CDS 30.0%
TATTGTATAATCATCACCTC+TGG - chr1_2:72361601-72361620 None:intergenic 30.0%
! TTGACAGCAATTGATAATCT+TGG + chr1_2:72365239-72365258 Msa0090380:CDS 30.0%
! ATTGATAATCTTGGTCAGAT+AGG + chr1_2:72356027-72356046 Msa0090380:CDS 30.0%
!! AAAGTGCTTATGCTTTTCTT+TGG - chr1_2:72356069-72356088 None:intergenic 30.0%
TTGTGTCTTTAGTAAGCATT+TGG + chr1_2:72356088-72356107 Msa0090380:CDS 30.0%
! GTAAGCATTTGGAATTATCT+AGG + chr1_2:72356099-72356118 Msa0090380:CDS 30.0%
AGAGTTAAAGTAAGCATAAG+AGG - chr1_2:72356183-72356202 None:intergenic 30.0%
TACGTAGCTTCAGTAATAAT+TGG + chr1_2:72356258-72356277 Msa0090380:CDS 30.0%
! GCCATTATATCAGAACTTTT+TGG + chr1_2:72356315-72356334 Msa0090380:CDS 30.0%
! CCCAAAAAGTTCTGATATAA+TGG - chr1_2:72356319-72356338 None:intergenic 30.0%
CAAAGAAGCTAAGAAACAAT+TGG + chr1_2:72362106-72362125 Msa0090380:CDS 30.0%
! TTGGAAAGCATAGAATAGAA+GGG + chr1_2:72362135-72362154 Msa0090380:CDS 30.0%
!!! TGCTGTTGTTTCACTTATTT+TGG + chr1_2:72356560-72356579 Msa0090380:CDS 30.0%
!!! TGTTGTTTCACTTATTTTGG+TGG + chr1_2:72356563-72356582 Msa0090380:CDS 30.0%
! AGGACAAGAAAGTTTTACAA+AGG + chr1_2:72362260-72362279 Msa0090380:CDS 30.0%
AACACCAATGGAATTACCTA+CGG - chr1_2:72354930-72354949 None:intergenic 35.0%
! TTTTGCCTCCTTTCTAATCA+TGG + chr1_2:72355012-72355031 Msa0090380:CDS 35.0%
!!! CCAAGTGTTGTTTTTATGTC+TGG - chr1_2:72355076-72355095 None:intergenic 35.0%
CCAGACATAAAAACAACACT+TGG + chr1_2:72355073-72355092 Msa0090380:CDS 35.0%
!! GGTGCTATTCTCAATTTCTT+TGG + chr1_2:72355211-72355230 Msa0090380:CDS 35.0%
AAATAGCAAGACCACAAGTT+TGG + chr1_2:72355266-72355285 Msa0090380:intron 35.0%
GGAATTCTTAAAGGCTATGT+TGG + chr1_2:72355397-72355416 Msa0090380:intron 35.0%
AATGGTTCGAAGAAAAGCAA+AGG - chr1_2:72355521-72355540 None:intergenic 35.0%
!! AGTTCATTAACTTGTCGAAC+AGG - chr1_2:72355556-72355575 None:intergenic 35.0%
!! TATATTTCACTTGGTCTTGC+TGG + chr1_2:72355598-72355617 Msa0090380:intron 35.0%
! AGTTTTTCACAGAGTGAGTA+TGG + chr1_2:72355658-72355677 Msa0090380:intron 35.0%
! GCAGAGTAAAAAACTTGCTT+TGG + chr1_2:72355756-72355775 Msa0090380:CDS 35.0%
GTATAATCATTACCTCTTGC+TGG - chr1_2:72355925-72355944 None:intergenic 35.0%
CTATTTGTGGCATGTATTTG+TGG + chr1_2:72355982-72356001 Msa0090380:CDS 35.0%
!!! GATTTTGTTTTGGTGCTCAA+TGG + chr1_2:72356280-72356299 Msa0090380:CDS 35.0%
TTAAGCACATATAACCCAAG+TGG - chr1_2:72356387-72356406 None:intergenic 35.0%
CAAAGAAGCAAAGAAGCAAT+TGG + chr1_2:72356434-72356453 Msa0090380:CDS 35.0%
CTTGGAAAGCAAAGAATAGA+AGG + chr1_2:72356462-72356481 Msa0090380:CDS 35.0%
!!! TTTCACTTATTTTGGTGGCT+AGG + chr1_2:72356568-72356587 Msa0090380:CDS 35.0%
! AGGACCAGAAAGTTTTACAA+AGG + chr1_2:72356588-72356607 Msa0090380:CDS 35.0%
GTCACCTTTGTAAAACTTTC+TGG - chr1_2:72356595-72356614 None:intergenic 35.0%
ATATAGGGAAGAAGCTGAAA+TGG + chr1_2:72356626-72356645 Msa0090380:CDS 35.0%
ACAGAAGAAGATGACAAAGT+TGG + chr1_2:72356672-72356691 Msa0090380:intron 35.0%
TGTTGCGACAACTTAGAATT+AGG + chr1_2:72356707-72356726 Msa0090380:intron 35.0%
TGTGCATCTCTTACTTCAAT+CGG + chr1_2:72357050-72357069 Msa0090380:intron 35.0%
!! AATTGGTTCGTTGGATTAAC+GGG + chr1_2:72357096-72357115 Msa0090380:intron 35.0%
ATCAACGTGCATGTAAGTAA+AGG - chr1_2:72357176-72357195 None:intergenic 35.0%
TTTACTTACATGCACGTTGA+TGG + chr1_2:72357175-72357194 Msa0090380:intron 35.0%
TGGATTCGTTCAAACATGTT+TGG - chr1_2:72357217-72357236 None:intergenic 35.0%
ATATGATTTCGATTCCACAG+AGG - chr1_2:72357277-72357296 None:intergenic 35.0%
!! TTAGTTTTCTTTTGGGCCTT+TGG - chr1_2:72357382-72357401 None:intergenic 35.0%
ATAAGATTGTGGTATAGTCG+AGG - chr1_2:72357545-72357564 None:intergenic 35.0%
GACATACTTCACTTTAGGTA+AGG - chr1_2:72357742-72357761 None:intergenic 35.0%
TTTAAGTGGATCTGCAACAA+TGG + chr1_2:72357878-72357897 Msa0090380:intron 35.0%
CAATTGCGAAACTTTGTTAC+AGG - chr1_2:72358099-72358118 None:intergenic 35.0%
TTAGATCATCTTGAGGTCAT+TGG - chr1_2:72358170-72358189 None:intergenic 35.0%
GTAATCCATGATTAGAGCAT+CGG - chr1_2:72358259-72358278 None:intergenic 35.0%
TAGATATAGTGTACGGTACT+GGG - chr1_2:72358301-72358320 None:intergenic 35.0%
ATGCGTCTAGATATAGTGTA+CGG - chr1_2:72358308-72358327 None:intergenic 35.0%
ATGCAAGACAATAAACGATG+TGG - chr1_2:72358459-72358478 None:intergenic 35.0%
TGTCTTCGTCATATAAAACC+GGG + chr1_2:72358667-72358686 Msa0090380:intron 35.0%
!!! TTTTAGGACTACAATGGCAT+TGG - chr1_2:72358970-72358989 None:intergenic 35.0%
!!! AGACTCTTTTAGGACTACAA+TGG - chr1_2:72358976-72358995 None:intergenic 35.0%
AACGCCATTATCAAAGAAAC+CGG + chr1_2:72359110-72359129 Msa0090380:intron 35.0%
ATATTGAGTTTCACACCTTG+TGG + chr1_2:72359238-72359257 Msa0090380:intron 35.0%
! GATTTTATCCTATTGCCACA+AGG - chr1_2:72359256-72359275 None:intergenic 35.0%
ACTAAGATATATGGGGACAA+TGG - chr1_2:72359495-72359514 None:intergenic 35.0%
GAGAGAAACTGAATTCTAGA+TGG - chr1_2:72359740-72359759 None:intergenic 35.0%
TAGAATTCAGTTTCTCTCAC+AGG + chr1_2:72359742-72359761 Msa0090380:intron 35.0%
!! AGGCGAGGTGTTTTAAATTT+TGG + chr1_2:72359849-72359868 Msa0090380:intron 35.0%
AAACAAAAGCCACACAATTG+TGG - chr1_2:72360017-72360036 None:intergenic 35.0%
!! TGGCTTTTGTTTCTCATCAA+AGG + chr1_2:72360025-72360044 Msa0090380:intron 35.0%
!! TTTCTCATCAAAGGTGTCAA+TGG + chr1_2:72360034-72360053 Msa0090380:intron 35.0%
TAGCGTGCATTTGACAAATT+TGG + chr1_2:72360078-72360097 Msa0090380:intron 35.0%
TCAAAAAGAATCATGGGTAG+CGG + chr1_2:72360124-72360143 Msa0090380:intron 35.0%
CTTGGGATTATTCTCAATTG+AGG + chr1_2:72360332-72360351 Msa0090380:intron 35.0%
ATAACCAACTAGATTGATGG+AGG + chr1_2:72360410-72360429 Msa0090380:intron 35.0%
TAGATTGATGGAGGAAACAT+AGG + chr1_2:72360419-72360438 Msa0090380:intron 35.0%
!!! GAGCACCATTATTGGTTTTA+AGG + chr1_2:72360494-72360513 Msa0090380:intron 35.0%
GCTTGCAATCCAAGTAAATA+TGG + chr1_2:72360588-72360607 Msa0090380:intron 35.0%
CACCAATTGCCATATTTACT+TGG - chr1_2:72360600-72360619 None:intergenic 35.0%
! AAGTGTTTCTTTTATGTCGC+TGG - chr1_2:72360746-72360765 None:intergenic 35.0%
AGCGACATAAAAGAAACACT+TGG + chr1_2:72360745-72360764 Msa0090380:CDS 35.0%
AACACAAGTAACAAGTGAAC+CGG - chr1_2:72355344-72355363 None:intergenic 35.0%
!!! GCTGTTTTGGGAATTCTAAA+AGG + chr1_2:72361060-72361079 Msa0090380:intron 35.0%
!! AAAGGATATCTTGGTCTTAG+TGG + chr1_2:72361078-72361097 Msa0090380:intron 35.0%
!! TCGCTTTTCTTAGAACCATT+CGG + chr1_2:72361193-72361212 Msa0090380:intron 35.0%
AACAGGTTTCATATACCGAA+TGG - chr1_2:72361211-72361230 None:intergenic 35.0%
AAGAGTAGTAGTTTCACACA+GGG + chr1_2:72361321-72361340 Msa0090380:CDS 35.0%
! GAAGAGTAAAAAGCTTGCTT+TGG + chr1_2:72361428-72361447 Msa0090380:CDS 35.0%
! AACATATCTTCCCACCATTT+TGG - chr1_2:72361567-72361586 None:intergenic 35.0%
CTATTTGTGGCATGTATTTG+TGG + chr1_2:72355982-72356001 Msa0090380:CDS 35.0%
!! TTGACAGCAGTTGATAATCT+TGG + chr1_2:72361690-72361709 Msa0090380:CDS 35.0%
!! GTTGATAATCTTGGTCAGAT+AGG + chr1_2:72361699-72361718 Msa0090380:CDS 35.0%
!! TATTTAGGACGTGTTTTCTC+CGG + chr1_2:72361786-72361805 Msa0090380:intron 35.0%
! AGAGTCAAAGAAAGCATAAG+AGG - chr1_2:72361855-72361874 None:intergenic 35.0%
TATGCAGCTTCAGTGATTAT+CGG + chr1_2:72361930-72361949 Msa0090380:CDS 35.0%
!!! GATTTTGTTTTGGTGCTCAA+TGG + chr1_2:72356280-72356299 Msa0090380:CDS 35.0%
! GGAAGTATAACAAGTCCAAT+TGG + chr1_2:72362041-72362060 Msa0090380:intron 35.0%
!! AAGAAACAATTGGAAGCACT+TGG + chr1_2:72362116-72362135 Msa0090380:CDS 35.0%
! CTTGGAAAGCATAGAATAGA+AGG + chr1_2:72362134-72362153 Msa0090380:CDS 35.0%
!!! TTAACCTTATTTTGGTGGCT+AGG + chr1_2:72362240-72362259 Msa0090380:CDS 35.0%
ATATAGGGAAGAAGCTGAAA+TGG + chr1_2:72356626-72356645 Msa0090380:CDS 35.0%
ACAGAAGAAGATGACAAAGT+TGG + chr1_2:72356672-72356691 Msa0090380:intron 35.0%
CAACTTAGAAATAGGGCAAA+TGG + chr1_2:72362377-72362396 Msa0090380:intron 35.0%
AGAAATAGGGCAAATGGTTA+AGG + chr1_2:72362383-72362402 Msa0090380:intron 35.0%
TGATCTATGACATGGGATAT+CGG - chr1_2:72362418-72362437 None:intergenic 35.0%
GGATCTATGATCTATGACAT+GGG - chr1_2:72362425-72362444 None:intergenic 35.0%
TGGATCTATGATCTATGACA+TGG - chr1_2:72362426-72362445 None:intergenic 35.0%
!!! TATTGGTTTTCAAGTGTGAG+TGG - chr1_2:72362727-72362746 None:intergenic 35.0%
TTATACTTGATCCAAGCACT+AGG + chr1_2:72362777-72362796 Msa0090380:intron 35.0%
TCATTCATTCAGTGTATGAG+TGG - chr1_2:72363015-72363034 None:intergenic 35.0%
! CAATAAGCCTTTCTAGTGAA+AGG + chr1_2:72363302-72363321 Msa0090380:intron 35.0%
ATGCTCCCAAAAAAATATGG+TGG + chr1_2:72363421-72363440 Msa0090380:intron 35.0%
CTCTACTATAAGGTCAAGAA+AGG + chr1_2:72363498-72363517 Msa0090380:intron 35.0%
! ACCTTTTGTAAAGGTGATGT+TGG + chr1_2:72363706-72363725 Msa0090380:intron 35.0%
TCCAACATCACCTTTACAAA+AGG - chr1_2:72363710-72363729 None:intergenic 35.0%
! TTTTGTAAAGGTGATGTTGG+AGG + chr1_2:72363709-72363728 Msa0090380:intron 35.0%
TATTAACTCATCTGCTGATG+AGG - chr1_2:72363739-72363758 None:intergenic 35.0%
GGTGACATAAAAACAACACT+TGG + chr1_2:72364309-72364328 Msa0090380:CDS 35.0%
TAAGGAGGTTTAGTGTACTT+TGG - chr1_2:72364341-72364360 None:intergenic 35.0%
!! AAAGATTTTGGTAGCAACGT+TGG + chr1_2:72364369-72364388 Msa0090380:CDS 35.0%
ATTGTTAAAACTACCCAAGG+TGG - chr1_2:72364426-72364445 None:intergenic 35.0%
CCTATTGTTAAAACTACCCA+AGG - chr1_2:72364429-72364448 None:intergenic 35.0%
!!! CCTTGGGTAGTTTTAACAAT+AGG + chr1_2:72364426-72364445 Msa0090380:intron 35.0%
! AGACACATTTGCCAAACTTT+TGG - chr1_2:72364516-72364535 None:intergenic 35.0%
! TTCTCAGTCTTTTGCAAACA+CGG + chr1_2:72355321-72355340 Msa0090380:intron 35.0%
GGAATTCTTAAAGGCTATGT+TGG + chr1_2:72355397-72355416 Msa0090380:intron 35.0%
AAAGCAAAAGAAATAGCAGC+AGG - chr1_2:72364744-72364763 None:intergenic 35.0%
TCGACAAGTTAATGAGCTTA+AGG + chr1_2:72364794-72364813 Msa0090380:intron 35.0%
GTGTGAAACTACTATTCTTC+TGG - chr1_2:72364884-72364903 None:intergenic 35.0%
GAAGAATAGTAGTTTCACAC+AGG + chr1_2:72364884-72364903 Msa0090380:intron 35.0%
! GCAGAGTAAAAAACTAGCTT+TGG + chr1_2:72364992-72365011 Msa0090380:CDS 35.0%
CTCCAAAAAAAGATCCAAAG+TGG + chr1_2:72365099-72365118 Msa0090380:CDS 35.0%
!!! CACCACTTTGGATCTTTTTT+TGG - chr1_2:72365104-72365123 None:intergenic 35.0%
CAAAAAAAGATCCAAAGTGG+TGG + chr1_2:72365102-72365121 Msa0090380:CDS 35.0%
CTATTTGTGGCATGTATTTG+TGG + chr1_2:72355982-72356001 Msa0090380:CDS 35.0%
!!! GATTTTGTTTTGGTGCTCAA+TGG + chr1_2:72356280-72356299 Msa0090380:CDS 35.0%
TTAAGCACATATAACCCAAG+TGG - chr1_2:72356387-72356406 None:intergenic 35.0%
!! AAGAAACAATTGGAAGCACT+TGG + chr1_2:72362116-72362135 Msa0090380:CDS 35.0%
! CTTGGAAAGCATAGAATAGA+AGG + chr1_2:72362134-72362153 Msa0090380:CDS 35.0%
TGCAGCGGTAATAATAATGA+AGG - chr1_2:72365750-72365769 None:intergenic 35.0%
!!! ATTACCGCTGCAACATTTTT+TGG + chr1_2:72365758-72365777 Msa0090380:CDS 35.0%
!!! TTTCACTTATTTTGGTGGCT+AGG + chr1_2:72356568-72356587 Msa0090380:CDS 35.0%
ACAAAGGTGACATATACAAG+AGG + chr1_2:72356604-72356623 Msa0090380:CDS 35.0%
! GGTAATTCCATTGGTGTTCA+TGG + chr1_2:72354932-72354951 Msa0090380:CDS 40.0%
! TTCCATTGGTGTTCATGGTT+TGG + chr1_2:72354937-72354956 Msa0090380:CDS 40.0%
! TCCATTGGTGTTCATGGTTT+GGG + chr1_2:72354938-72354957 Msa0090380:CDS 40.0%
TAAGGAGGTTTAGTGTGCTT+TGG - chr1_2:72355105-72355124 None:intergenic 40.0%
! AAAGACTTTGGTAGCAACGT+TGG + chr1_2:72355133-72355152 Msa0090380:intron 40.0%
! GTTCGTTGATTAGTCCTGAA+AGG - chr1_2:72355162-72355181 None:intergenic 40.0%
ATTGTCAAAACTACCCATGG+TGG - chr1_2:72355190-72355209 None:intergenic 40.0%
CCTATTGTCAAAACTACCCA+TGG - chr1_2:72355193-72355212 None:intergenic 40.0%
!!! CCATGGGTAGTTTTGACAAT+AGG + chr1_2:72355190-72355209 Msa0090380:CDS 40.0%
AGACACATTTGCCAAACTTG+TGG - chr1_2:72355280-72355299 None:intergenic 40.0%
! TCTCAGTCTTTTGCAAACAC+TGG + chr1_2:72355322-72355341 Msa0090380:intron 40.0%
!!! GCGGTTTTGGGAATTCTTAA+AGG + chr1_2:72355388-72355407 Msa0090380:intron 40.0%
!! AAAGGCTATGTTGGTCTTAG+TGG + chr1_2:72355406-72355425 Msa0090380:intron 40.0%
AAAGCAAAGGAAATAGCAGC+AGG - chr1_2:72355508-72355527 None:intergenic 40.0%
TCAATGAAAACAACGGCAAG+TGG - chr1_2:72355721-72355740 None:intergenic 40.0%
! GTTACTATTTGCACTGGTGA+AGG - chr1_2:72355787-72355806 None:intergenic 40.0%
CCTTCTGTTACTATTTGCAC+TGG - chr1_2:72355793-72355812 None:intergenic 40.0%
CCAGTGCAAATAGTAACAGA+AGG + chr1_2:72355790-72355809 Msa0090380:CDS 40.0%
TGTTGAACTGAGGTTGTTGT+TGG - chr1_2:72355836-72355855 None:intergenic 40.0%
! AACACATCTTCCCACCATTT+TGG - chr1_2:72355895-72355914 None:intergenic 40.0%
TAATCATTACCTCTTGCTGG+TGG - chr1_2:72355922-72355941 None:intergenic 40.0%
!! TGGTGTTGGTGGAACTTTAA+CGG + chr1_2:72356002-72356021 Msa0090380:CDS 40.0%
!! TATCTAGGACGTGTTTTCTC+AGG + chr1_2:72356114-72356133 Msa0090380:CDS 40.0%
AAAGTAAGCATAAGAGGACG+AGG - chr1_2:72356177-72356196 None:intergenic 40.0%
AACTCTCTTTGTCTCATGTG+TGG + chr1_2:72356197-72356216 Msa0090380:CDS 40.0%
ACTCTCTTTGTCTCATGTGT+GGG + chr1_2:72356198-72356217 Msa0090380:CDS 40.0%
GCACATCAAATGCTATCAGA+AGG - chr1_2:72356227-72356246 None:intergenic 40.0%
ATAGCATTTGATGTGCCTGA+GGG + chr1_2:72356231-72356250 Msa0090380:CDS 40.0%
!! AAGAAGCAATTGGAAGCACT+TGG + chr1_2:72356444-72356463 Msa0090380:CDS 40.0%
AAAGCAAAGAATAGAAGGGC+AGG + chr1_2:72356467-72356486 Msa0090380:CDS 40.0%
GTACACAATCATGCTAACAG+GGG - chr1_2:72356938-72356957 None:intergenic 40.0%
CGTACACAATCATGCTAACA+GGG - chr1_2:72356939-72356958 None:intergenic 40.0%
ACGTACACAATCATGCTAAC+AGG - chr1_2:72356940-72356959 None:intergenic 40.0%
GTTGAAATGAGCATACTTCG+AGG - chr1_2:72356969-72356988 None:intergenic 40.0%
GTATGCTCATTTCAACGTCT+CGG + chr1_2:72356973-72356992 Msa0090380:intron 40.0%
AAGAGATGCACAACTCTGTA+TGG - chr1_2:72357042-72357061 None:intergenic 40.0%
GTGCATCTCTTACTTCAATC+GGG + chr1_2:72357051-72357070 Msa0090380:intron 40.0%
TTACTTCAATCGGGATGATC+TGG + chr1_2:72357060-72357079 Msa0090380:intron 40.0%
CTGGTAAAGGATGGTGAAAT+TGG + chr1_2:72357079-72357098 Msa0090380:intron 40.0%
AATGACATGGATGTGTAGCA+TGG + chr1_2:72357637-72357656 Msa0090380:intron 40.0%
TCATGAGCATACTGCTTGTA+TGG - chr1_2:72357829-72357848 None:intergenic 40.0%
CTAACAACAGAAAATCGACG+AGG - chr1_2:72357989-72358008 None:intergenic 40.0%
!!! CGTCGATTTTCTGTTGTTAG+TGG + chr1_2:72357989-72358008 Msa0090380:intron 40.0%
TCAGAGGTTAGATCATCTTG+AGG - chr1_2:72358177-72358196 None:intergenic 40.0%
CTAGATATAGTGTACGGTAC+TGG - chr1_2:72358302-72358321 None:intergenic 40.0%
! TGGGAGCAAGTATATTTTCC+CGG - chr1_2:72358688-72358707 None:intergenic 40.0%
TCAAGCAAGCATTTCGACAA+TGG - chr1_2:72358791-72358810 None:intergenic 40.0%
TTCGAGAGAGAACCAAAAAG+CGG - chr1_2:72359092-72359111 None:intergenic 40.0%
CTCTCCGGTTTCTTTGATAA+TGG - chr1_2:72359117-72359136 None:intergenic 40.0%
AGGTCAAGAGAACCAAAAAG+CGG - chr1_2:72359215-72359234 None:intergenic 40.0%
ATCAATGCCATGAAGGACAA+TGG - chr1_2:72359286-72359305 None:intergenic 40.0%
!! AATTGATGATGACGCGATCA+TGG - chr1_2:72359332-72359351 None:intergenic 40.0%
AAAGATAATTTGGCTAGGCG+AGG + chr1_2:72359834-72359853 Msa0090380:intron 40.0%
TTGGATTCTCTTGCTTGTGT+TGG + chr1_2:72359868-72359887 Msa0090380:intron 40.0%
!! CATCAAAGGTGTCAATGGAA+AGG + chr1_2:72360039-72360058 Msa0090380:intron 40.0%
TGGAAAGGCTTCAAGTAGTT+TGG + chr1_2:72360054-72360073 Msa0090380:intron 40.0%
GATAGGGGAAACTACATTTG+TGG + chr1_2:72360155-72360174 Msa0090380:intron 40.0%
GTTTCCTCCATCAATCTAGT+TGG - chr1_2:72360417-72360436 None:intergenic 40.0%
TTGATGGAGGAAACATAGGT+TGG + chr1_2:72360423-72360442 Msa0090380:intron 40.0%
! GCAATAGCTAGCACTTTTGT+TGG - chr1_2:72360562-72360581 None:intergenic 40.0%
! TGGCAATTGGTGTTCATGAT+TGG + chr1_2:72360608-72360627 Msa0090380:intron 40.0%
! GGCAATTGGTGTTCATGATT+GGG + chr1_2:72360609-72360628 Msa0090380:intron 40.0%
! GCAATTGGTGTTCATGATTG+GGG + chr1_2:72360610-72360629 Msa0090380:intron 40.0%
AAAAATGACAAACCACCGTC+CGG - chr1_2:72360668-72360687 None:intergenic 40.0%
TTTCTAATCATGTCAGCTGC+CGG + chr1_2:72360694-72360713 Msa0090380:CDS 40.0%
! TTTCGTTGATTAGTCCTGCA+AGG - chr1_2:72360834-72360853 None:intergenic 40.0%
ATTGCTAAAACTACCCAAGG+TGG - chr1_2:72360862-72360881 None:intergenic 40.0%
CCTATTGCTAAAACTACCCA+AGG - chr1_2:72360865-72360884 None:intergenic 40.0%
!!! CCTTGGGTAGTTTTAGCAAT+AGG + chr1_2:72360862-72360881 Msa0090380:CDS 40.0%
AAACTGCAAGACCACATGTT+TGG + chr1_2:72360938-72360957 Msa0090380:intron 40.0%
AGACACATTTGCCAAACATG+TGG - chr1_2:72360952-72360971 None:intergenic 40.0%
! TCTCAGTCTTTTGCAAACAC+CGG + chr1_2:72355322-72355341 Msa0090380:intron 40.0%
AAAGCGAATGAAATAGCAGC+AGG - chr1_2:72361180-72361199 None:intergenic 40.0%
TCGACAAGTCAATGAGCTTA+AGG + chr1_2:72361230-72361249 Msa0090380:intron 40.0%
GAAGAGTAGTAGTTTCACAC+AGG + chr1_2:72361320-72361339 Msa0090380:CDS 40.0%
CCTTCTGTTACTATTTGCAC+TGG - chr1_2:72355793-72355812 None:intergenic 40.0%
CCAGTGCAAATAGTAACAGA+AGG + chr1_2:72355790-72355809 Msa0090380:CDS 40.0%
TGTTGAACTGAGGTTGTTGT+TGG - chr1_2:72355836-72355855 None:intergenic 40.0%
GGAAGATATGTTCAATCCAC+CGG + chr1_2:72361575-72361594 Msa0090380:CDS 40.0%
GTATAATCATCACCTCTTGC+CGG - chr1_2:72361597-72361616 None:intergenic 40.0%
GTGGCATGTATTTGTGGTAT+TGG + chr1_2:72361660-72361679 Msa0090380:CDS 40.0%
! GCATGTATTTGTGGTATTGG+TGG + chr1_2:72361663-72361682 Msa0090380:CDS 40.0%
! AAAGAAAGCATAAGAGGACG+AGG - chr1_2:72361849-72361868 None:intergenic 40.0%
!! GGACACCTTTTGATAGCATT+TGG + chr1_2:72361891-72361910 Msa0090380:CDS 40.0%
GCACACCAAATGCTATCAAA+AGG - chr1_2:72361899-72361918 None:intergenic 40.0%
!! ATAGCATTTGGTGTGCCAAA+GGG + chr1_2:72361903-72361922 Msa0090380:CDS 40.0%
GTGCTTAATGTGAAGATCAC+TGG + chr1_2:72362071-72362090 Msa0090380:CDS 40.0%
AAAGCATAGAATAGAAGGGC+AGG + chr1_2:72362139-72362158 Msa0090380:CDS 40.0%
ATTGCAGCTGCAACTTTCTT+TGG + chr1_2:72362209-72362228 Msa0090380:intron 40.0%
TTGTCCTAGCCACCAAAATA+AGG - chr1_2:72362247-72362266 None:intergenic 40.0%
AAGATGACAAAGTTGGCATG+CGG + chr1_2:72362351-72362370 Msa0090380:intron 40.0%
TGCGGTGACAACTTAGAAAT+AGG + chr1_2:72362369-72362388 Msa0090380:intron 40.0%
GCGGTGACAACTTAGAAATA+GGG + chr1_2:72362370-72362389 Msa0090380:intron 40.0%
! AAAAAGGGCAGACACGATTT+TGG + chr1_2:72362533-72362552 Msa0090380:intron 40.0%
! AAAAGGGCAGACACGATTTT+GGG + chr1_2:72362534-72362553 Msa0090380:intron 40.0%
! GTGAGTGGTTAGTCATTCAT+AGG - chr1_2:72362712-72362731 None:intergenic 40.0%
ACACTTGAGGGGAAGATTAT+TGG - chr1_2:72362744-72362763 None:intergenic 40.0%
TGGTGGAAACTTACACTTGA+GGG - chr1_2:72362756-72362775 None:intergenic 40.0%
CTTGGATCAAGTATAAGTGG+TGG - chr1_2:72362773-72362792 None:intergenic 40.0%
GTGCTTGGATCAAGTATAAG+TGG - chr1_2:72362776-72362795 None:intergenic 40.0%
AAGATTGAGATCCTAGTGCT+TGG - chr1_2:72362791-72362810 None:intergenic 40.0%
ATTAGAACCCAAGTTCAGCT+TGG - chr1_2:72362821-72362840 None:intergenic 40.0%
! TGGGTTCTAATACCACTTGT+TGG + chr1_2:72362830-72362849 Msa0090380:intron 40.0%
! GGGTTCTAATACCACTTGTT+GGG + chr1_2:72362831-72362850 Msa0090380:intron 40.0%
! GGTTCTAATACCACTTGTTG+GGG + chr1_2:72362832-72362851 Msa0090380:intron 40.0%
! TACCACTTGTTGGGGAAATA+AGG + chr1_2:72362840-72362859 Msa0090380:intron 40.0%
! ACCACTTGTTGGGGAAATAA+GGG + chr1_2:72362841-72362860 Msa0090380:intron 40.0%
ATATTCCCGGAGCATAATAG+AGG + chr1_2:72362889-72362908 Msa0090380:intron 40.0%
TATTCCCGGAGCATAATAGA+GGG + chr1_2:72362890-72362909 Msa0090380:intron 40.0%
ATCATGTTGAGAATCCATGG+TGG - chr1_2:72363066-72363085 None:intergenic 40.0%
ATGCATTAGAGAATCCATGG+TGG - chr1_2:72363105-72363124 None:intergenic 40.0%
GGTATGCATTAGAGAATCCA+TGG - chr1_2:72363108-72363127 None:intergenic 40.0%
ATAGTAGAGAGCAAGAGAGT+CGG - chr1_2:72363487-72363506 None:intergenic 40.0%
CTCTCTTGCTCTCTACTATA+AGG + chr1_2:72363488-72363507 Msa0090380:intron 40.0%
CTTGTTGAGAAGAAGCAACA+TGG - chr1_2:72363540-72363559 None:intergenic 40.0%
!! TTTACTTTTCTCCGAGAGAG+AGG + chr1_2:72363595-72363614 Msa0090380:intron 40.0%
GCTCATATGATTGCTCATTG+TGG + chr1_2:72363629-72363648 Msa0090380:intron 40.0%
CAAAAGGTTGCAAAAAGAGC+AGG - chr1_2:72363694-72363713 None:intergenic 40.0%
TTAAATAGAGAGAGAGAGGG+AGG - chr1_2:72364040-72364059 None:intergenic 40.0%
! GGTAATTCCATTGGTGTTCA+TGG + chr1_2:72354932-72354951 Msa0090380:CDS 40.0%
! TCCATTGGTGTTCATGGTTT+AGG + chr1_2:72354938-72354957 Msa0090380:CDS 40.0%
TCCTAAACCATGAACACCAA+TGG - chr1_2:72364178-72364197 None:intergenic 40.0%
TACATGTTCGGTCTATACTC+CGG + chr1_2:72355052-72355071 Msa0090380:CDS 40.0%
! TCTCAGTCTTTTGCAAACAC+GGG + chr1_2:72355322-72355341 Msa0090380:intron 40.0%
AAGAATTTCCCTGAATCTCG+TGG + chr1_2:72364600-72364619 Msa0090380:intron 40.0%
!!! GCGGTTTTGGGAATTCTTAA+AGG + chr1_2:72355388-72355407 Msa0090380:intron 40.0%
!! AAAGGCTATGTTGGTCTTAG+TGG + chr1_2:72355406-72355425 Msa0090380:intron 40.0%
!! AGCTCATTAACTTGTCGAAC+AGG - chr1_2:72364792-72364811 None:intergenic 40.0%
TATGTTTCACTTGGTCTAGC+TGG + chr1_2:72364834-72364853 Msa0090380:intron 40.0%
TCAATGAAAACAACGGCAAG+TGG - chr1_2:72355721-72355740 None:intergenic 40.0%
! GTTACTATTTGCACTGGTGA+AGG - chr1_2:72355787-72355806 None:intergenic 40.0%
CCTTCTGTTACTATTTGCAC+TGG - chr1_2:72355793-72355812 None:intergenic 40.0%
CCAGTGCAAATAGTAACAGA+AGG + chr1_2:72355790-72355809 Msa0090380:CDS 40.0%
!! TATCTAGGACGTGTTTTCTC+AGG + chr1_2:72356114-72356133 Msa0090380:CDS 40.0%
AAAGTAAGCATAAGAGGACG+AGG - chr1_2:72356177-72356196 None:intergenic 40.0%
AACTCTCTTTGTCTCATGTG+TGG + chr1_2:72356197-72356216 Msa0090380:CDS 40.0%
ACTCTCTTTGTCTCATGTGT+GGG + chr1_2:72356198-72356217 Msa0090380:CDS 40.0%
GCACATCAAATGCTATCAGA+AGG - chr1_2:72356227-72356246 None:intergenic 40.0%
ATAGCATTTGATGTGCCAGA+GGG + chr1_2:72365452-72365471 Msa0090380:CDS 40.0%
GTGCTTAATGTGAAGATCAC+TGG + chr1_2:72362071-72362090 Msa0090380:CDS 40.0%
AGCACCAAAAAATGTTGCAG+CGG - chr1_2:72356544-72356563 None:intergenic 40.0%
GTACAGAGAAGAAGCTGAAA+TGG + chr1_2:72365847-72365866 Msa0090380:CDS 40.0%
AAAGAACGTGGAAAAGACAG+AGG + chr1_2:72365877-72365896 Msa0090380:CDS 40.0%
ACAGAGGAAGATGACAAAGT+TGG + chr1_2:72365893-72365912 Msa0090380:CDS 40.0%
TCCCAAACCATGAACACCAA+TGG - chr1_2:72354942-72354961 None:intergenic 45.0%
AAAAATGACGAACCACCGTC+CGG - chr1_2:72354996-72355015 None:intergenic 45.0%
GTATAGACCGAACATGTAGG+TGG - chr1_2:72355050-72355069 None:intergenic 45.0%
GGAGTATAGACCGAACATGT+AGG - chr1_2:72355053-72355072 None:intergenic 45.0%
TCAACGAACTCTATCCACCA+TGG + chr1_2:72355173-72355192 Msa0090380:CDS 45.0%
CAACGAACTCTATCCACCAT+GGG + chr1_2:72355174-72355193 Msa0090380:CDS 45.0%
AAGAATTTCCCGGAATCTCG+TGG + chr1_2:72355364-72355383 Msa0090380:intron 45.0%
! TGGTCTTGCTGGATTCTTGT+TGG + chr1_2:72355609-72355628 Msa0090380:intron 45.0%
! GTATGGTTTAAGTGCTGCTG+TGG + chr1_2:72355675-72355694 Msa0090380:CDS 45.0%
GACTGAAACTGAAACAGCAG+AGG - chr1_2:72355860-72355879 None:intergenic 45.0%
GTGGCATGTATTTGTGGTGT+TGG + chr1_2:72355988-72356007 Msa0090380:CDS 45.0%
! GCATGTATTTGTGGTGTTGG+TGG + chr1_2:72355991-72356010 Msa0090380:CDS 45.0%
GATAGCATTTGATGTGCCTG+AGG + chr1_2:72356230-72356249 Msa0090380:CDS 45.0%
GAAGTGTAGCAAGTCCACTT+GGG + chr1_2:72356370-72356389 Msa0090380:CDS 45.0%
GTGCTTAATGTGAAGATCGC+TGG + chr1_2:72356399-72356418 Msa0090380:intron 45.0%
GGGCAGGAATTGAATTGTGT+TGG + chr1_2:72356483-72356502 Msa0090380:CDS 45.0%
TAGGGAAGAAGCTGAAATGG+TGG + chr1_2:72356629-72356648 Msa0090380:CDS 45.0%
! AATGGTGGAGGTAAAGAACG+AGG + chr1_2:72356644-72356663 Msa0090380:intron 45.0%
! ATGGTGGAGGTAAAGAACGA+GGG + chr1_2:72356645-72356664 Msa0090380:intron 45.0%
CAATCGGGATGATCTGGTAA+AGG + chr1_2:72357066-72357085 Msa0090380:intron 45.0%
!! GGATGGTGAAATTGGTTCGT+TGG + chr1_2:72357087-72357106 Msa0090380:intron 45.0%
!! ACATGCACGTTGATGGTTTG+AGG + chr1_2:72357182-72357201 Msa0090380:intron 45.0%
TCAGTAAACCAAGACCTCTG+TGG + chr1_2:72357260-72357279 Msa0090380:intron 45.0%
TTTCGATTCCACAGAGGTCT+TGG - chr1_2:72357271-72357290 None:intergenic 45.0%
TTGGTACAAAAGAGGGCCAA+AGG + chr1_2:72357363-72357382 Msa0090380:intron 45.0%
TTGTGGTATAGTCGAGGTGA+TGG - chr1_2:72357539-72357558 None:intergenic 45.0%
! GGTGGCAACTCTCTTTTAAG+TGG + chr1_2:72357864-72357883 Msa0090380:intron 45.0%
TGTTACAGGGCTGGACATAA+TGG - chr1_2:72358085-72358104 None:intergenic 45.0%
ACTACATGCTCGCATATCAG+AGG - chr1_2:72358193-72358212 None:intergenic 45.0%
GTTTGCCGATGCTCTAATCA+TGG + chr1_2:72358251-72358270 Msa0090380:intron 45.0%
AACTTGTCTCCCTTATCTGC+AGG + chr1_2:72358429-72358448 Msa0090380:intron 45.0%
ACTTGTCTCCCTTATCTGCA+GGG + chr1_2:72358430-72358449 Msa0090380:intron 45.0%
AAAGCTCGTGTTGTCGCAAA+AGG - chr1_2:72359056-72359075 None:intergenic 45.0%
AAAGCTCGTGTTGTCGCAAA+AGG - chr1_2:72359056-72359075 None:intergenic 45.0%
AAGAGAACCAAAAAGCGGTG+TGG - chr1_2:72359210-72359229 None:intergenic 45.0%
GTTTCACACCTTGTGGCAAT+AGG + chr1_2:72359245-72359264 Msa0090380:intron 45.0%
AAGGTGGATCAATGCCATGA+AGG - chr1_2:72359293-72359312 None:intergenic 45.0%
!! GCATCGAAATCTGGCTCTAT+TGG - chr1_2:72359459-72359478 None:intergenic 45.0%
ATAGAGCCAGATTTCGATGC+CGG + chr1_2:72359459-72359478 Msa0090380:intron 45.0%
CTTGCTTGTGTACCAACAGA+TGG - chr1_2:72359537-72359556 None:intergenic 45.0%
GATTCTCTTGCTTGTGTTGG+AGG + chr1_2:72359871-72359890 Msa0090380:intron 45.0%
!! ATCATGGGTAGCGGATATTG+TGG + chr1_2:72360133-72360152 Msa0090380:intron 45.0%
!! GGTAGCGGATATTGTGGATA+GGG + chr1_2:72360139-72360158 Msa0090380:intron 45.0%
!! GTAGCGGATATTGTGGATAG+GGG + chr1_2:72360140-72360159 Msa0090380:intron 45.0%
AGGGGAAACTACATTTGTGG+TGG + chr1_2:72360158-72360177 Msa0090380:intron 45.0%
GGCAGCTGACATGATTAGAA+AGG - chr1_2:72360695-72360714 None:intergenic 45.0%
GTATAGACCGAACATGTAGG+TGG - chr1_2:72355050-72355069 None:intergenic 45.0%
GGAGTATAGACCGAACATGT+AGG - chr1_2:72355053-72355072 None:intergenic 45.0%
TAAGGAGGTCTAGTGTGCTT+TGG - chr1_2:72360777-72360796 None:intergenic 45.0%
TCAACGAAATCTCTCCACCT+TGG + chr1_2:72360845-72360864 Msa0090380:CDS 45.0%
CAACGAAATCTCTCCACCTT+GGG + chr1_2:72360846-72360865 Msa0090380:CDS 45.0%
AAGAATTTCCCCGAATCTCG+CGG + chr1_2:72361036-72361055 Msa0090380:intron 45.0%
!! AGCTCATTGACTTGTCGAAC+AGG - chr1_2:72361228-72361247 None:intergenic 45.0%
TACATCTCACTTGCTCTTGC+TGG + chr1_2:72361270-72361289 Msa0090380:intron 45.0%
!! TGCTCTTGCTGGTTTCTTGT+TGG + chr1_2:72361281-72361300 Msa0090380:intron 45.0%
AGTTTCACACAGGGTGAGTT+TGG + chr1_2:72361330-72361349 Msa0090380:CDS 45.0%
! GTTTGGTTTAAGTGCTGCTG+TGG + chr1_2:72361347-72361366 Msa0090380:CDS 45.0%
GACTGAAACTGAAACAGCAG+AGG - chr1_2:72355860-72355879 None:intergenic 45.0%
ACTCTCTTTGTCTCGTGTGT+GGG + chr1_2:72361870-72361889 Msa0090380:CDS 45.0%
!! GATAGCATTTGGTGTGCCAA+AGG + chr1_2:72361902-72361921 Msa0090380:CDS 45.0%
GGGCAGGAATTGAATTGTGT+TGG + chr1_2:72356483-72356502 Msa0090380:CDS 45.0%
TAGGGAAGAAGCTGAAATGG+TGG + chr1_2:72356629-72356648 Msa0090380:CDS 45.0%
! AATGGTGGAGGTAAAGAACG+AGG + chr1_2:72356644-72356663 Msa0090380:intron 45.0%
! ATGGTGGAGGTAAAGAACGA+GGG + chr1_2:72356645-72356664 Msa0090380:intron 45.0%
GGTGGAAACTTACACTTGAG+GGG - chr1_2:72362755-72362774 None:intergenic 45.0%
! GTGGTGGAAACTTACACTTG+AGG - chr1_2:72362757-72362776 None:intergenic 45.0%
! CCACTTGTTGGGGAAATAAG+GGG + chr1_2:72362842-72362861 Msa0090380:intron 45.0%
TGTCTCCCTCTATTATGCTC+CGG - chr1_2:72362898-72362917 None:intergenic 45.0%
AAGAGAGTCGGTCTCAAAAG+TGG - chr1_2:72363475-72363494 None:intergenic 45.0%
! GTTGGTGCTTACTGCTTACT+TGG - chr1_2:72364123-72364142 None:intergenic 45.0%
!! ATGGCGGTTGGTAATTCCAT+TGG + chr1_2:72364159-72364178 Msa0090380:intron 45.0%
CTCACTGTCCAATTCATCAC+CGG + chr1_2:72364210-72364229 Msa0090380:CDS 45.0%
TTTCGCCTCCTTCCTAATCA+TGG + chr1_2:72364248-72364267 Msa0090380:CDS 45.0%
GTATAGACCGAACATGTAGG+TGG - chr1_2:72355050-72355069 None:intergenic 45.0%
GGAGTATAGACCGAACATGT+AGG - chr1_2:72355053-72355072 None:intergenic 45.0%
TCAACGAACTCTATCCACCT+TGG + chr1_2:72364409-72364428 Msa0090380:CDS 45.0%
CAACGAACTCTATCCACCTT+GGG + chr1_2:72364410-72364429 Msa0090380:CDS 45.0%
TGGTCTAGCTGGATTCTTGT+TGG + chr1_2:72364845-72364864 Msa0090380:intron 45.0%
AGTTTCACACAGGGTGAGTT+TGG + chr1_2:72361330-72361349 Msa0090380:CDS 45.0%
AACACATCTTCCCACCACTT+TGG - chr1_2:72365116-72365135 None:intergenic 45.0%
GTATAATCATCACCTCTGGC+TGG - chr1_2:72365146-72365165 None:intergenic 45.0%
GTGGCATGTATTTGTGGTGT+TGG + chr1_2:72355988-72356007 Msa0090380:CDS 45.0%
! GCATGTATTTGTGGTGTTGG+TGG + chr1_2:72355991-72356010 Msa0090380:CDS 45.0%
GATAGCATTTGATGTGCCAG+AGG + chr1_2:72365451-72365470 Msa0090380:CDS 45.0%
GAAGTGTAGCAAGTCCACTT+GGG + chr1_2:72356370-72356389 Msa0090380:CDS 45.0%
GGGCGTGAATTGAATTGTGT+TGG + chr1_2:72365704-72365723 Msa0090380:CDS 45.0%
CAGAGAAGAAGCTGAAATGG+TGG + chr1_2:72365850-72365869 Msa0090380:CDS 45.0%
AGAAGAAGCTGAAATGGTGG+AGG + chr1_2:72365853-72365872 Msa0090380:CDS 45.0%
! AATGGTGGAGGTAAAGAACG+TGG + chr1_2:72356644-72356663 Msa0090380:intron 45.0%
CTCACCGTCCAATTCATCAC+CGG + chr1_2:72354974-72354993 Msa0090380:CDS 50.0%
GGCTGCCATGATTAGAAAGG+AGG - chr1_2:72355020-72355039 None:intergenic 50.0%
TTTCTAATCATGGCAGCCGC+CGG + chr1_2:72355022-72355041 Msa0090380:CDS 50.0%
! AGCAACGTTGGTGTCCTTTC+AGG + chr1_2:72355145-72355164 Msa0090380:CDS 50.0%
CAGCAGAGGTTGTTGAACTG+AGG - chr1_2:72355846-72355865 None:intergenic 50.0%
GTGTTCAATCCACCAGCAAG+AGG + chr1_2:72355910-72355929 Msa0090380:intron 50.0%
! GGAAGTGTAGCAAGTCCACT+TGG + chr1_2:72356369-72356388 Msa0090380:CDS 50.0%
GGAAGAAGCTGAAATGGTGG+AGG + chr1_2:72356632-72356651 Msa0090380:CDS 50.0%
CGGGATGATCTGGTAAAGGA+TGG + chr1_2:72357070-72357089 Msa0090380:intron 50.0%
! TGGATTAACGGGTGCTTAGC+CGG + chr1_2:72357107-72357126 Msa0090380:intron 50.0%
!! AGGGCTGGACATAATGGATG+TGG - chr1_2:72358079-72358098 None:intergenic 50.0%
GCGAAACTTTGTTACAGGGC+TGG - chr1_2:72358094-72358113 None:intergenic 50.0%
! AGTGTACGGTACTGGGATGT+TGG - chr1_2:72358294-72358313 None:intergenic 50.0%
CTTGTCTCCCTTATCTGCAG+GGG + chr1_2:72358431-72358450 Msa0090380:intron 50.0%
TGTGGTACCCCTGCAGATAA+GGG - chr1_2:72358441-72358460 None:intergenic 50.0%
ATGTGGTACCCCTGCAGATA+AGG - chr1_2:72358442-72358461 None:intergenic 50.0%
!! TACCTCTCCACACCGCTTTT+TGG + chr1_2:72359077-72359096 Msa0090380:intron 50.0%
AACCAAAAAGCGGTGTGGAG+AGG - chr1_2:72359082-72359101 None:intergenic 50.0%
GAGAGAACCAAAAAGCGGTG+TGG - chr1_2:72359087-72359106 None:intergenic 50.0%
!! TACCTCTCCACACCGCTTTT+TGG + chr1_2:72359077-72359096 Msa0090380:intron 50.0%
AACCAAAAAGCGGTGTGGAG+AGG - chr1_2:72359082-72359101 None:intergenic 50.0%
TCGAACGCCATTGTCCTTCA+TGG + chr1_2:72359276-72359295 Msa0090380:intron 50.0%
TAGAGCCAGATTTCGATGCC+GGG + chr1_2:72359460-72359479 Msa0090380:intron 50.0%
! ATTTCCCCGGCATCGAAATC+TGG - chr1_2:72359468-72359487 None:intergenic 50.0%
GGACAATGGCATCATTTCCC+CGG - chr1_2:72359481-72359500 None:intergenic 50.0%
CTTGCTTGTGTTGGAGGTTG+TGG + chr1_2:72359877-72359896 Msa0090380:intron 50.0%
GAGCATGCTCCACAATTGTG+TGG + chr1_2:72360005-72360024 Msa0090380:intron 50.0%
!! GGGTAGCGGATATTGTGGAT+AGG + chr1_2:72360138-72360157 Msa0090380:intron 50.0%
! AGCAATGTTGGTGTCCTTGC+AGG + chr1_2:72360817-72360836 Msa0090380:CDS 50.0%
AAAACAGCTCCGCGAGATTC+GGG - chr1_2:72361048-72361067 None:intergenic 50.0%
CAAAACAGCTCCGCGAGATT+CGG - chr1_2:72361049-72361068 None:intergenic 50.0%
!! GAATCTCGCGGAGCTGTTTT+GGG + chr1_2:72361048-72361067 Msa0090380:intron 50.0%
CAGCAGAGGTTGTTGAACTG+AGG - chr1_2:72355846-72355865 None:intergenic 50.0%
ATGTTCAATCCACCGGCAAG+AGG + chr1_2:72361582-72361601 Msa0090380:CDS 50.0%
TAATCATCACCTCTTGCCGG+TGG - chr1_2:72361594-72361613 None:intergenic 50.0%
GACTCTCTTTGTCTCGTGTG+TGG + chr1_2:72361869-72361888 Msa0090380:CDS 50.0%
GAAGCTGCATAGAGACCCTT+TGG - chr1_2:72361921-72361940 None:intergenic 50.0%
GGAAGAAGCTGAAATGGTGG+AGG + chr1_2:72356632-72356651 Msa0090380:CDS 50.0%
GAACCCAAGTTCAGCTTGGT+GGG - chr1_2:72362817-72362836 None:intergenic 50.0%
AGAACCCAAGTTCAGCTTGG+TGG - chr1_2:72362818-72362837 None:intergenic 50.0%
! CCCCTTATTTCCCCAACAAG+TGG - chr1_2:72362845-72362864 None:intergenic 50.0%
GTCTCCCTCTATTATGCTCC+GGG - chr1_2:72362897-72362916 None:intergenic 50.0%
!! CCAACGATTAGCCTCTCTCT+CGG - chr1_2:72363609-72363628 None:intergenic 50.0%
CGAGAGAGAGGCTAATCGTT+GGG + chr1_2:72363607-72363626 Msa0090380:intron 50.0%
CTGTCCAATTCATCACCGGA+CGG + chr1_2:72364214-72364233 Msa0090380:CDS 50.0%
GAAAATGACGAACCACCGTC+CGG - chr1_2:72364232-72364251 None:intergenic 50.0%
! GTTCGTTGACTAGTCCTGCA+AGG - chr1_2:72364398-72364417 None:intergenic 50.0%
TAATCATCACCTCTGGCTGG+TGG - chr1_2:72365143-72365162 None:intergenic 50.0%
! GGAAGTGTAGCAAGTCCACT+TGG + chr1_2:72356369-72356388 Msa0090380:CDS 50.0%
AGTTGGTCAACAGCAGCATG+TGG + chr1_2:72356689-72356708 Msa0090380:intron 50.0%
GCGGCCGTAGGTAATTCCAT+TGG + chr1_2:72354923-72354942 Msa0090380:CDS 55.0%
CCGTCCGGTGATGAATTGGA+CGG - chr1_2:72354981-72355000 None:intergenic 55.0%
CCGTCCAATTCATCACCGGA+CGG + chr1_2:72354978-72354997 Msa0090380:CDS 55.0%
TCCAATTCATCACCGGACGG+TGG + chr1_2:72354981-72355000 Msa0090380:CDS 55.0%
ACCACCGTCCGGTGATGAAT+TGG - chr1_2:72354985-72355004 None:intergenic 55.0%
GGCGGCTGCCATGATTAGAA+AGG - chr1_2:72355023-72355042 None:intergenic 55.0%
ACCGAACATGTAGGTGGCTC+CGG - chr1_2:72355044-72355063 None:intergenic 55.0%
AAAACCGCGCCACGAGATTC+CGG - chr1_2:72355376-72355395 None:intergenic 55.0%
! GAATCTCGTGGCGCGGTTTT+GGG + chr1_2:72355376-72355395 Msa0090380:intron 55.0%
GAAGCTACGTAGAGACCCTC+AGG - chr1_2:72356249-72356268 None:intergenic 55.0%
! ACGGTACTGGGATGTTGGAC+AGG - chr1_2:72358289-72358308 None:intergenic 55.0%
AGAGCCAGATTTCGATGCCG+GGG + chr1_2:72359461-72359480 Msa0090380:intron 55.0%
ACCGAACATGTAGGTGGCTC+CGG - chr1_2:72355044-72355063 None:intergenic 55.0%
AAACAGCTCCGCGAGATTCG+GGG - chr1_2:72361047-72361066 None:intergenic 55.0%
! CGAATCTCGCGGAGCTGTTT+TGG + chr1_2:72361047-72361066 Msa0090380:intron 55.0%
TGCTCCCACCAAGCTGAACT+TGG + chr1_2:72362810-72362829 Msa0090380:intron 55.0%
GCTCCCACCAAGCTGAACTT+GGG + chr1_2:72362811-72362830 Msa0090380:intron 55.0%
CCGAGAGAGAGGCTAATCGT+TGG + chr1_2:72363606-72363625 Msa0090380:intron 55.0%
TCCAATTCATCACCGGACGG+TGG + chr1_2:72354981-72355000 Msa0090380:CDS 55.0%
ACCACCGTCCGGTGATGAAT+TGG - chr1_2:72354985-72355004 None:intergenic 55.0%
GGCTGCCATGATTAGGAAGG+AGG - chr1_2:72364256-72364275 None:intergenic 55.0%
TTCCTAATCATGGCAGCCGC+CGG + chr1_2:72364258-72364277 Msa0090380:CDS 55.0%
ACCGAACATGTAGGTGGCTC+CGG - chr1_2:72355044-72355063 None:intergenic 55.0%
! AGCAACGTTGGTGTCCTTGC+AGG + chr1_2:72364381-72364400 Msa0090380:CDS 55.0%
TTTCCCTGAATCTCGTGGCG+CGG + chr1_2:72364605-72364624 Msa0090380:intron 55.0%
AAACCGCGCCACGAGATTCA+GGG - chr1_2:72364611-72364630 None:intergenic 55.0%
AAAACCGCGCCACGAGATTC+AGG - chr1_2:72355376-72355395 None:intergenic 55.0%
! TGAATCTCGTGGCGCGGTTT+TGG + chr1_2:72364611-72364630 Msa0090380:intron 55.0%
! GAATCTCGTGGCGCGGTTTT+GGG + chr1_2:72355376-72355395 Msa0090380:intron 55.0%
GTGTTCAATCCACCAGCCAG+AGG + chr1_2:72365131-72365150 Msa0090380:CDS 55.0%
GAAGCTACGTAGAGACCCTC+TGG - chr1_2:72356249-72356268 None:intergenic 55.0%
GAACATGTAGGTGGCTCCGG+CGG - chr1_2:72355041-72355060 None:intergenic 60.0%
GCCGGAGCCACCTACATGTT+CGG + chr1_2:72355040-72355059 Msa0090380:CDS 60.0%
TTTCCCGGAATCTCGTGGCG+CGG + chr1_2:72355369-72355388 Msa0090380:intron 60.0%
AAACCGCGCCACGAGATTCC+GGG - chr1_2:72355375-72355394 None:intergenic 60.0%
! GGAATCTCGTGGCGCGGTTT+TGG + chr1_2:72355375-72355394 Msa0090380:intron 60.0%
CTCACCGTCCAAGCCATCAC+CGG + chr1_2:72360646-72360665 Msa0090380:CDS 60.0%
GACAAACCACCGTCCGGTGA+TGG - chr1_2:72360662-72360681 None:intergenic 60.0%
GCCGGAGCCACCTACATGTT+CGG + chr1_2:72355040-72355059 Msa0090380:CDS 60.0%
GGCGGCTGCCATGATTAGGA+AGG - chr1_2:72364259-72364278 None:intergenic 60.0%
GAACATGTAGGTGGCTCCGG+CGG - chr1_2:72355041-72355060 None:intergenic 60.0%
GCCGGAGCCACCTACATGTT+CGG + chr1_2:72355040-72355059 Msa0090380:CDS 60.0%
! CCGTCCGGTGATGGCTTGGA+CGG - chr1_2:72360653-72360672 None:intergenic 65.0%
CCGTCCAAGCCATCACCGGA+CGG + chr1_2:72360650-72360669 Msa0090380:CDS 65.0%
TCCAAGCCATCACCGGACGG+TGG + chr1_2:72360653-72360672 Msa0090380:CDS 65.0%
! ACCACCGTCCGGTGATGGCT+TGG - chr1_2:72360657-72360676 None:intergenic 65.0%
CTCCGGCGGCTGCCATGATT+AGG - chr1_2:72355027-72355046 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 72354920 72365943 72354920 ID=Msa0090380;Name=Msa0090380
chr1_2 mRNA 72354920 72365943 72354920 ID=Msa0090380-mRNA-1;Parent=Msa0090380;Name=Msa0090380-mRNA-1;_AED=0.16;_eAED=0.16;_QI=0|0|0|1|0.14|0.13|15|0|1227
chr1_2 exon 72354920 72355124 72354920 ID=Msa0090380-mRNA-1:exon:25084;Parent=Msa0090380-mRNA-1
chr1_2 exon 72355137 72355255 72355137 ID=Msa0090380-mRNA-1:exon:25085;Parent=Msa0090380-mRNA-1
chr1_2 exon 72355649 72355654 72355649 ID=Msa0090380-mRNA-1:exon:25086;Parent=Msa0090380-mRNA-1
chr1_2 exon 72355670 72355911 72355670 ID=Msa0090380-mRNA-1:exon:25087;Parent=Msa0090380-mRNA-1
chr1_2 exon 72355966 72356163 72355966 ID=Msa0090380-mRNA-1:exon:25088;Parent=Msa0090380-mRNA-1
chr1_2 exon 72356170 72356407 72356170 ID=Msa0090380-mRNA-1:exon:25089;Parent=Msa0090380-mRNA-1
chr1_2 exon 72356414 72356653 72356414 ID=Msa0090380-mRNA-1:exon:25090;Parent=Msa0090380-mRNA-1
chr1_2 exon 72360643 72360883 72360643 ID=Msa0090380-mRNA-1:exon:25091;Parent=Msa0090380-mRNA-1
chr1_2 exon 72361319 72361483 72361319 ID=Msa0090380-mRNA-1:exon:25092;Parent=Msa0090380-mRNA-1
chr1_2 exon 72361544 72361774 72361544 ID=Msa0090380-mRNA-1:exon:25093;Parent=Msa0090380-mRNA-1
chr1_2 exon 72361793 72362030 72361793 ID=Msa0090380-mRNA-1:exon:25094;Parent=Msa0090380-mRNA-1
chr1_2 exon 72362046 72362176 72362046 ID=Msa0090380-mRNA-1:exon:25095;Parent=Msa0090380-mRNA-1
chr1_2 exon 72362216 72362361 72362216 ID=Msa0090380-mRNA-1:exon:25096;Parent=Msa0090380-mRNA-1
chr1_2 exon 72364207 72364431 72364207 ID=Msa0090380-mRNA-1:exon:25097;Parent=Msa0090380-mRNA-1
chr1_2 exon 72364885 72365943 72364885 ID=Msa0090380-mRNA-1:exon:25098;Parent=Msa0090380-mRNA-1
chr1_2 CDS 72354920 72355124 72354920 ID=Msa0090380-mRNA-1:cds;Parent=Msa0090380-mRNA-1
chr1_2 CDS 72355137 72355255 72355137 ID=Msa0090380-mRNA-1:cds;Parent=Msa0090380-mRNA-1
chr1_2 CDS 72355649 72355654 72355649 ID=Msa0090380-mRNA-1:cds;Parent=Msa0090380-mRNA-1
chr1_2 CDS 72355670 72355911 72355670 ID=Msa0090380-mRNA-1:cds;Parent=Msa0090380-mRNA-1
chr1_2 CDS 72355966 72356163 72355966 ID=Msa0090380-mRNA-1:cds;Parent=Msa0090380-mRNA-1
chr1_2 CDS 72356170 72356407 72356170 ID=Msa0090380-mRNA-1:cds;Parent=Msa0090380-mRNA-1
chr1_2 CDS 72356414 72356653 72356414 ID=Msa0090380-mRNA-1:cds;Parent=Msa0090380-mRNA-1
chr1_2 CDS 72360643 72360883 72360643 ID=Msa0090380-mRNA-1:cds;Parent=Msa0090380-mRNA-1
chr1_2 CDS 72361319 72361483 72361319 ID=Msa0090380-mRNA-1:cds;Parent=Msa0090380-mRNA-1
chr1_2 CDS 72361544 72361774 72361544 ID=Msa0090380-mRNA-1:cds;Parent=Msa0090380-mRNA-1
chr1_2 CDS 72361793 72362030 72361793 ID=Msa0090380-mRNA-1:cds;Parent=Msa0090380-mRNA-1
chr1_2 CDS 72362046 72362176 72362046 ID=Msa0090380-mRNA-1:cds;Parent=Msa0090380-mRNA-1
chr1_2 CDS 72362216 72362361 72362216 ID=Msa0090380-mRNA-1:cds;Parent=Msa0090380-mRNA-1
chr1_2 CDS 72364207 72364431 72364207 ID=Msa0090380-mRNA-1:cds;Parent=Msa0090380-mRNA-1
chr1_2 CDS 72364885 72365943 72364885 ID=Msa0090380-mRNA-1:cds;Parent=Msa0090380-mRNA-1
Gene Sequence

>Msa0090380

ATGGCGGCCGTAGGTAATTCCATTGGTGTTCATGGTTTGGGAGACATGAAGAGTCTCACCGTCCAATTCATCACCGGACGGTGGTTCGTCATTTTTGCCTCCTTTCTAATCATGGCAGCCGCCGGAGCCACCTACATGTTCGGTCTATACTCCCCAGACATAAAAACAACACTTGGCTATGACCAAAGCACACTAAACCTCCTTAACTTTGGTAGCAACGTTGGTGTCCTTTCAGGACTAATCAACGAACTCTATCCACCATGGGTAGTTTTGACAATAGGTGCTATTCTCAATTTCTTTGGTTACTTCATGATTTGGTTATCAAAGAAGAGTGAGTATGGTTTAAGTGCTGCTGTGGTTATTTTCTTGCTTTTTCTTCCACTTGCCGTTGTTTTCATTGAAGAGAACAAGATTTGGCAGAGTAAAAAACTTGCTTTGGTTGATCCTTCACCAGTGCAAATAGTAACAGAAGGTAAAACTGAAACTGAAAAAGCCAACAACAACCTCAGTTCAACAACCTCTGCTGTTTCAGTTTCAGTCCCAAAAAAAGATCCAAAATGGTGGGAAGATGTCATAGATATGTTGATACTATTTGTGGCATGTATTTGTGGTGTTGGTGGAACTTTAACGGCAATTGATAATCTTGGTCAGATAGGAACATCACTTAGATATCCAAAGAAAAGCATAAGCACTTTTGTGTCTTTAGTAAGCATTTGGAATTATCTAGGACGTGTTTTCTCAGGATTTGTTTCTGAGCATTTTCTAACGAAATTTCCTCGTCCTCTTATGCTTACTTTAACTCTCTTTGTCTCATGTGTGGGACACCTTCTGATAGCATTTGATGTGCCTGAGGGTCTCTACGTAGCTTCAGTAATAATTGGATTTTGTTTTGGTGCTCAATGGCCATTACTTTTTGCCATTATATCAGAACTTTTTGGGCTAAAATATTATGCAACTTTATATAATTTTGGAAGTGTAGCAAGTCCACTTGGGTTATATGTGCTTAATATCGCTGGTCATTTGTATGACAAAGAAGCAAAGAAGCAATTGGAAGCACTTGGAAAGCAAAGAATAGAAGGGCAGGAATTGAATTGTGTTGGTGTTGATTGTTACAAGTTATCTTTCATTATTATTACAGCTGCAACATTTTTTGGTGCTGTTGTTTCACTTATTTTGGTGGCTAGGACCAGAAAGTTTTACAAAGGTGACATATACAAGAGATATAGGGAAGAAGCTGAAATGGTGGAGAGTCTCACCGTCCAAGCCATCACCGGACGGTGGTTTGTCATTTTTGCTTCCTTTCTAATCATGTCAGCTGCCGGAGCCACCTACATGTTCGGTCTATACTCCAGCGACATAAAAGAAACACTTGGCTATGACCAAAGCACACTAGACCTCCTTAGTTTTTTCAAAGATTTTGGTAGCAATGTTGGTGTCCTTGCAGGACTAATCAACGAAATCTCTCCACCTTGGGTAGTTTTAGCAATAGAGAAGAGTAGTAGTTTCACACAGGGTGAGTTTGGTTTAAGTGCTGCTGTGGTGATTTTCTTGCTTTTTCTCCCACTTGCTGTTGTTTTTATTGAAGAGAACAAGATTTGGAAGAGTAAAAAGCTTGCTTTGGTTGACTCTTCACCAGTGCAAATAGTAACAGAAGTTTCAGTCCCAAAAAAAGATCCAAAATGGTGGGAAGATATGTTCAATCCACCGGCAAGAGGTGATGATTATACAATACTTCAAGCACTTTTCAGCATAGACATGTTGATACTATTTGTGGCATGTATTTGTGGTATTGGTGGATCATTGACAGCAGTTGATAATCTTGGTCAGATAGGAACATCACTTAGATATCCAAAGAAAAGCATAAGCACTTTTGTGTCTTTAGTAAGACGTGTTTTCTCCGGATTTGTTTCAGAACATTTTCTAACAAAGTACAGATTTCCTCGTCCTCTTATGCTTTCTTTGACTCTCTTTGTCTCGTGTGTGGGACACCTTTTGATAGCATTTGGTGTGCCAAAGGGTCTCTATGCAGCTTCAGTGATTATCGGATTTTGTTTTGGTGCTCAATGGCCATTACTTTTTGCCATTATATCAGAACTTTTTGGACTTAAATATTATGCAACTTTTATAACAAGTCCAATTGGCTTATATGTGCTTAATGTGAAGATCACTGGTCATTTGTATGACAAAGAAGCTAAGAAACAATTGGAAGCACTTGGAAAGCATAGAATAGAAGGGCAGGAATTGAATTGTGTTGCTGCAACTTTCTTTGGTGCTGTTGTTAACCTTATTTTGGTGGCTAGGACAAGAAAGTTTTACAAAGGTGACATATACAAGAGATATAGGGAAGAAGCTGAAATGGTGGAGGTAAAGAACGAGGGAAAAACAGAAGAAGATGACAAAAGTCTCACTGTCCAATTCATCACCGGACGGTGGTTCGTCATTTTCGCCTCCTTCCTAATCATGGCAGCCGCCGGAGCCACCTACATGTTCGGTCTATACTCCGGTGACATAAAAACAACACTTGGTTATGACCAAAGTACACTAAACCTCCTTAGTTTTTTCAAAGATTTTGGTAGCAACGTTGGTGTCCTTGCAGGACTAGTCAACGAACTCTATCCACCTTGGAAGAATAGTAGTTTCACACAGGGTGAGTTTGGTTTAAGTGCTGCTGTGGTTATTTTCTTGCTTTTTCTTCCACTTGCCGTTGTTTTCATTGAAGAGAACAAGATTTGGCAGAGTAAAAAACTAGCTTTGGTTGATCCTTCACCAGTGCAAATAGTAACAGAAGGTGAAACTGTAACTGAAACAGAAAAAGTCAACTCTGCTGTTTCAGTTTCAGCTCCAAAAAAAGATCCAAAGTGGTGGGAAGATGTGTTCAATCCACCAGCCAGAGGTGATGATTATACAATACTTCAAGCACTTTTCAGCATAGATATGTTGATACTATTTGTGGCATGTATTTGTGGTGTTGGTGGAACTTTGACAGCAATTGATAATCTTGGTCAGATAGGAACATCACTTAGATATCCAAAGAAAAGCATAAGCACTTTTGTGTCTTTAGTAAGCATTTGGAATTATCTAGGACGTGTTTTCTCAGGATTTGTTTCTGAACATTTTCTAACGAAGTACAGATTTCCTCGTCCTCTTATGCTTACTTTAACTCTCTTTGTCTCATGTGTGGGACACCTTCTGATAGCATTTGATGTGCCAGAGGGTCTCTACGTAGCTTCAGTAATAATTGGATTTTGTTTTGGTGCTCAATGGCCATTACTTTTTGCCATTATATCAGAACTTTTTGGGCTAAAATATTATGCAACTTTGTATAATTTTGGAAGTGTAGCAAGTCCACTTGGGTTATATGTGCTTAATGTGAAGATCACTGGTCATTTGTATGACAAAGAAGCTAAGAAACAATTGGAAGCACTTGGAAAGCATAGAATAGAAGGGCGTGAATTGAATTGTGTTGGTGTTGATTGTTTCAAGTTATCCTTCATTATTATTACCGCTGCAACATTTTTTGGTGCTGTTGTTTCACTTATTTTGGTGGCTAGGACAAGAAAGTTTTACAAAGGTGACATATACAAGAGGTACAGAGAAGAAGCTGAAATGGTGGAGGTAAAGAACGTGGAAAAGACAGAGGAAGATGACAAAGTTGGTCAACAGCAGCATGTGGTGACAACTTAG
Protein sequence

>Msa0090380

MAAVGNSIGVHGLGDMKSLTVQFITGRWFVIFASFLIMAAAGATYMFGLYSPDIKTTLGYDQSTLNLLNFGSNVGVLSGLINELYPPWVVLTIGAILNFFGYFMIWLSKKSEYGLSAAVVIFLLFLPLAVVFIEENKIWQSKKLALVDPSPVQIVTEGKTETEKANNNLSSTTSAVSVSVPKKDPKWWEDVIDMLILFVACICGVGGTLTAIDNLGQIGTSLRYPKKSISTFVSLVSIWNYLGRVFSGFVSEHFLTKFPRPLMLTLTLFVSCVGHLLIAFDVPEGLYVASVIIGFCFGAQWPLLFAIISELFGLKYYATLYNFGSVASPLGLYVLNIAGHLYDKEAKKQLEALGKQRIEGQELNCVGVDCYKLSFIIITAATFFGAVVSLILVARTRKFYKGDIYKRYREEAEMVESLTVQAITGRWFVIFASFLIMSAAGATYMFGLYSSDIKETLGYDQSTLDLLSFFKDFGSNVGVLAGLINEISPPWVVLAIEKSSSFTQGEFGLSAAVVIFLLFLPLAVVFIEENKIWKSKKLALVDSSPVQIVTEVSVPKKDPKWWEDMFNPPARGDDYTILQALFSIDMLILFVACICGIGGSLTAVDNLGQIGTSLRYPKKSISTFVSLVRRVFSGFVSEHFLTKYRFPRPLMLSLTLFVSCVGHLLIAFGVPKGLYAASVIIGFCFGAQWPLLFAIISELFGLKYYATFITSPIGLYVLNVKITGHLYDKEAKKQLEALGKHRIEGQELNCVAATFFGAVVNLILVARTRKFYKGDIYKRYREEAEMVEVKNEGKTEEDDKSLTVQFITGRWFVIFASFLIMAAAGATYMFGLYSGDIKTTLGYDQSTLNLLSFFKDFGSNVGVLAGLVNELYPPWKNSSFTQGEFGLSAAVVIFLLFLPLAVVFIEENKIWQSKKLALVDPSPVQIVTEGETVTETEKVNSAVSVSAPKKDPKWWEDVFNPPARGDDYTILQALFSIDMLILFVACICGVGGTLTAIDNLGQIGTSLRYPKKSISTFVSLVSIWNYLGRVFSGFVSEHFLTKYRFPRPLMLTLTLFVSCVGHLLIAFDVPEGLYVASVIIGFCFGAQWPLLFAIISELFGLKYYATLYNFGSVASPLGLYVLNVKITGHLYDKEAKKQLEALGKHRIEGRELNCVGVDCFKLSFIIITAATFFGAVVSLILVARTRKFYKGDIYKRYREEAEMVEVKNVEKTEEDDKVGQQQHVVTT*