Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0463900 | XP_003601019.1 | 89.062 | 192 | 7 | 1 | 168 | 345 | 1 | 192 | 3.33e-116 | 344 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0463900 | G7J2G5 | 89.062 | 192 | 7 | 1 | 168 | 345 | 1 | 192 | 1.59e-116 | 344 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0094950 | Msa0463900 | 0.801552 | 8.531124e-49 | -8.615850e-47 |
| Msa0416400 | Msa0463900 | 0.824745 | 6.834727e-54 | -8.615850e-47 |
| Msa0463900 | Msa0824640 | 0.828302 | 9.694265e-55 | -8.615850e-47 |
| Msa0463900 | Msa0864010 | 0.821639 | 3.628105e-53 | -8.615850e-47 |
| Msa0463900 | Msa1373330 | 0.817221 | 3.690829e-52 | -8.615850e-47 |
| Msa0463900 | Msa1442850 | 0.809675 | 1.682629e-50 | -8.615850e-47 |
| Msa0241800 | Msa0463900 | 0.801994 | 6.924910e-49 | -8.615850e-47 |
| Msa0304300 | Msa0463900 | 0.800797 | 1.217641e-48 | -8.615850e-47 |
| Msa0304590 | Msa0463900 | 0.800004 | 1.766544e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0463900 | MtrunA17_Chr3g0114361 | 89.062 | 192 | 7 | 1 | 168 | 345 | 1 | 192 | 3.06e-120 | 344 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0463900 | AT3G56210.2 | 55.729 | 192 | 69 | 3 | 168 | 345 | 1 | 190 | 2.88e-67 | 210 |
| Msa0463900 | AT3G56210.4 | 55.729 | 192 | 69 | 3 | 168 | 345 | 1 | 190 | 2.88e-67 | 210 |
| Msa0463900 | AT3G56210.1 | 55.729 | 192 | 69 | 3 | 168 | 345 | 1 | 190 | 2.88e-67 | 210 |
| Msa0463900 | AT3G56210.5 | 55.670 | 194 | 68 | 3 | 168 | 345 | 1 | 192 | 3.98e-67 | 209 |
Find 82 sgRNAs with CRISPR-Local
Find 579 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATGAAGTTGAGAGAAAATT+TGG | 0.148495 | 3_3:-63474119 | Msa0463900:CDS |
| ATACCAGTTCTTTCCTTATA+TGG | 0.164827 | 3_3:-63474051 | Msa0463900:CDS |
| GTCACTACGCTGGTGGATTC+AGG | 0.237582 | 3_3:-63478852 | Msa0463900:CDS |
| TCAAGGATCCCTTGTTTAAA+AGG | 0.253637 | 3_3:-63473877 | Msa0463900:CDS |
| CTGGGGCCGTTTCAGTTATT+AGG | 0.289666 | 3_3:-63472091 | Msa0463900:intron |
| GGGGACTATTCAAGGGTTAC+AGG | 0.298816 | 3_3:-63478874 | Msa0463900:CDS |
| CGCGCTCTGGGGACTATTCA+AGG | 0.309526 | 3_3:-63478882 | Msa0463900:CDS |
| ACCACGTACCTTGCGCGCTC+TGG | 0.311342 | 3_3:-63478895 | Msa0463900:CDS |
| TTACGAGATTGTTGATTGAT+TGG | 0.333531 | 3_3:+63474639 | None:intergenic |
| TACCAGTTCTTTCCTTATAT+GGG | 0.350225 | 3_3:-63474050 | Msa0463900:intron |
| AACTCACCAGCAAGTATTAT+AGG | 0.352151 | 3_3:+63478699 | None:intergenic |
| TTCTCTGTGACAGTAGGAAA+TGG | 0.374265 | 3_3:-63478759 | Msa0463900:CDS |
| TTCTTTCTCAATATGATGTA+AGG | 0.382633 | 3_3:+63478437 | None:intergenic |
| GGATGATCAATACCCATATA+AGG | 0.383483 | 3_3:+63474038 | None:intergenic |
| CGGTGGGGAGGAAGTCCTTT+GGG | 0.392318 | 3_3:+63478318 | None:intergenic |
| ACACATCATACTTAAGATCT+TGG | 0.397349 | 3_3:+63472003 | None:intergenic |
| ATTACCATCTTTCGCAAAAC+GGG | 0.402350 | 3_3:+63473835 | None:intergenic |
| CCACGTACCTTGCGCGCTCT+GGG | 0.403118 | 3_3:-63478894 | Msa0463900:CDS |
| GAAAGCGGCGCTGAATGCTC+TGG | 0.425302 | 3_3:-63472861 | Msa0463900:CDS |
| ATGAAGTTGAGAGAAAATTT+GGG | 0.446589 | 3_3:-63474118 | Msa0463900:CDS |
| CAGGATGAAGATAGTTGAGT+TGG | 0.447066 | 3_3:-63472939 | Msa0463900:CDS |
| ACCAGATGAGCACCTACTCT+TGG | 0.447719 | 3_3:-63474144 | Msa0463900:intron |
| TCTGCATCCTCGAGTGAACT+TGG | 0.448399 | 3_3:+63472062 | None:intergenic |
| GGATCCCTTGTTTAAAAGGA+TGG | 0.452049 | 3_3:-63473873 | Msa0463900:CDS |
| CCGGTGGGGAGGAAGTCCTT+TGG | 0.453832 | 3_3:+63478317 | None:intergenic |
| TTTCCTACTGTCACAGAGAA+AGG | 0.465178 | 3_3:+63478762 | None:intergenic |
| AAAGGAGGGAAGGCCTCAAT+AGG | 0.467667 | 3_3:+63478780 | None:intergenic |
| AATTACCATCTTTCGCAAAA+CGG | 0.470056 | 3_3:+63473834 | None:intergenic |
| TTCGGGTCTGCACTTTATGC+GGG | 0.472073 | 3_3:-63474074 | Msa0463900:CDS |
| AAGGATGGGAGCTTCTAGAT+TGG | 0.473236 | 3_3:-63473858 | Msa0463900:CDS |
| TCAGCGCCGCTTTCCGCGTA+CGG | 0.475002 | 3_3:+63472870 | None:intergenic |
| GTTTCTCAAGTTACCTATTG+AGG | 0.481230 | 3_3:-63478793 | Msa0463900:CDS |
| TACCCATATAAGGAAAGAAC+TGG | 0.491561 | 3_3:+63474048 | None:intergenic |
| TCACTACGCTGGTGGATTCA+GGG | 0.496858 | 3_3:-63478851 | Msa0463900:CDS |
| GCAGTGCCTATAATACTTGC+TGG | 0.500756 | 3_3:-63478705 | Msa0463900:intron |
| TTTCGGGTCTGCACTTTATG+CGG | 0.501592 | 3_3:-63474075 | Msa0463900:CDS |
| GCGCGCAAGGTACGTGGTGA+TGG | 0.507652 | 3_3:+63478900 | None:intergenic |
| GATAAAAGAGTAGCTAACTC+AGG | 0.513390 | 3_3:+63478366 | None:intergenic |
| TCTCTGTGACAGTAGGAAAT+GGG | 0.525814 | 3_3:-63478758 | Msa0463900:CDS |
| AGGATGAAGATAGTTGAGTT+GGG | 0.534417 | 3_3:-63472938 | Msa0463900:CDS |
| AACGGCGCGCATTGTGCGAA+AGG | 0.535824 | 3_3:+63474808 | None:intergenic |
| CACATTTACTGGAGAAGAGG+TGG | 0.538750 | 3_3:+63478266 | None:intergenic |
| CCTCCTTTCTCTGTGACAGT+AGG | 0.545538 | 3_3:-63478765 | Msa0463900:CDS |
| CCAAAGGACTTCCTCCCCAC+CGG | 0.554066 | 3_3:-63478317 | Msa0463900:CDS |
| CTGGCTAAGCTGTCACACTC+AGG | 0.556360 | 3_3:-63472842 | Msa0463900:intron |
| GCGCTCTGGGGACTATTCAA+GGG | 0.557045 | 3_3:-63478881 | Msa0463900:CDS |
| AATAGTCCCCAGAGCGCGCA+AGG | 0.559049 | 3_3:+63478887 | None:intergenic |
| CAACTTCATGCTCCAAGAGT+AGG | 0.559968 | 3_3:+63474132 | None:intergenic |
| CAAGGGTGAATTGCTTCACT+AGG | 0.562427 | 3_3:+63478408 | None:intergenic |
| ATGATGATCTTTAGACCGGT+GGG | 0.566394 | 3_3:+63478302 | None:intergenic |
| GATCCCTTGTTTAAAAGGAT+GGG | 0.573907 | 3_3:-63473872 | Msa0463900:CDS |
| GGGCAAGCTATTCATTGTCA+AGG | 0.574085 | 3_3:-63478738 | Msa0463900:CDS |
| CCCAGAGCGCGCAAGGTACG+TGG | 0.574750 | 3_3:+63478894 | None:intergenic |
| GCTCATAAATATGTTAAGCA+CGG | 0.579888 | 3_3:-63472903 | Msa0463900:CDS |
| GAATATGATGATCTTTAGAC+CGG | 0.581220 | 3_3:+63478298 | None:intergenic |
| TATGATGATCTTTAGACCGG+TGG | 0.585987 | 3_3:+63478301 | None:intergenic |
| TAATATAATTCAACCTCGTG+TGG | 0.586086 | 3_3:-63478820 | Msa0463900:CDS |
| GTTAGAGAATTGAGCTGCAA+CGG | 0.595599 | 3_3:+63474790 | None:intergenic |
| ATGAAGATAGTTGAGTTGGG+TGG | 0.597821 | 3_3:-63472935 | Msa0463900:CDS |
| AGATGACCGTACGCGGAAAG+CGG | 0.603601 | 3_3:-63472876 | Msa0463900:CDS |
| GGAAAATTTGATGCATCAGT+CGG | 0.605099 | 3_3:-63473915 | Msa0463900:CDS |
| CACGTACCTTGCGCGCTCTG+GGG | 0.605189 | 3_3:-63478893 | Msa0463900:CDS |
| GGCGCGCATTGTGCGAAAGG+TGG | 0.617583 | 3_3:+63474811 | None:intergenic |
| CTACTGTCACAGAGAAAGGA+GGG | 0.620540 | 3_3:+63478766 | None:intergenic |
| ATAAAAGAGTAGCTAACTCA+GGG | 0.624583 | 3_3:+63478367 | None:intergenic |
| GCGCACATTTACTGGAGAAG+AGG | 0.626822 | 3_3:+63478263 | None:intergenic |
| TGTCACAGAGAAAGGAGGGA+AGG | 0.628629 | 3_3:+63478770 | None:intergenic |
| GTTACAGGTCACTACGCTGG+TGG | 0.631724 | 3_3:-63478859 | Msa0463900:CDS |
| CGGCAAAAGATGACCGTACG+CGG | 0.636397 | 3_3:-63472883 | Msa0463900:CDS |
| CCTACTGTCACAGAGAAAGG+AGG | 0.636685 | 3_3:+63478765 | None:intergenic |
| ACATTTACTGGAGAAGAGGT+GGG | 0.641002 | 3_3:+63478267 | None:intergenic |
| GATGTGTTTGAGATTCCCAA+AGG | 0.644893 | 3_3:-63478333 | Msa0463900:CDS |
| GTCCGCTCCAAGTTCACTCG+AGG | 0.644920 | 3_3:-63472069 | Msa0463900:CDS |
| AGGGTTACAGGTCACTACGC+TGG | 0.648144 | 3_3:-63478862 | Msa0463900:CDS |
| AAGTTGAGAGAAAATTTGGG+TGG | 0.650365 | 3_3:-63474115 | Msa0463900:CDS |
| ATCCTCGAGTGAACTTGGAG+CGG | 0.656765 | 3_3:+63472067 | None:intergenic |
| TATGATGTAAGGACACAGTG+TGG | 0.659401 | 3_3:+63478448 | None:intergenic |
| ATGATGTAAGGACACAGTGT+GGG | 0.662811 | 3_3:+63478449 | None:intergenic |
| TGATCTTTAGACCGGTGGGG+AGG | 0.672852 | 3_3:+63478306 | None:intergenic |
| TGATGATCTTTAGACCGGTG+GGG | 0.677766 | 3_3:+63478303 | None:intergenic |
| TTTGTGGTAAAGGATGGCAA+GGG | 0.694006 | 3_3:+63478391 | None:intergenic |
| TTGAGAAACTCAGCCACACG+AGG | 0.701682 | 3_3:+63478807 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAAATTTAGTTTACTCA+TGG | - | chr3_3:63475943-63475962 | Msa0463900:intron | 15.0% |
| !! | ATTTGTAAATGAATGAAAAA+GGG | + | chr3_3:63476193-63476212 | None:intergenic | 15.0% |
| !! | AATTTGTAAATGAATGAAAA+AGG | + | chr3_3:63476194-63476213 | None:intergenic | 15.0% |
| !!! | TTATTGAAGAGTATATTTTT+CGG | - | chr3_3:63476818-63476837 | Msa0463900:intron | 15.0% |
| !!! | CTATTTTTCAAAAGTATCTT+AGG | - | chr3_3:63473073-63473092 | Msa0463900:intron | 20.0% |
| !!! | ACTTTAAAGCAAATAGAAAT+AGG | + | chr3_3:63475621-63475640 | None:intergenic | 20.0% |
| !!! | TTGCATCAAAAAAACATTTT+TGG | - | chr3_3:63475776-63475795 | Msa0463900:intron | 20.0% |
| !! | TTTGTAAATGAATGAAAAAG+GGG | + | chr3_3:63476192-63476211 | None:intergenic | 20.0% |
| !!! | CAATTTTTCAACAAAAGTAT+GGG | + | chr3_3:63476337-63476356 | None:intergenic | 20.0% |
| !!! | TAGTTAGTTCTTCAATTTAA+GGG | + | chr3_3:63476401-63476420 | None:intergenic | 20.0% |
| !!! | TTAGTTAGTTCTTCAATTTA+AGG | + | chr3_3:63476402-63476421 | None:intergenic | 20.0% |
| !! | AATGACATAAATGAATGTAA+TGG | + | chr3_3:63476592-63476611 | None:intergenic | 20.0% |
| !!! | TATTGAAGAGTATATTTTTC+GGG | - | chr3_3:63476819-63476838 | Msa0463900:intron | 20.0% |
| !! | TTGTTGAAACAAAAATTTCA+GGG | - | chr3_3:63476973-63476992 | Msa0463900:intron | 20.0% |
| !! | AAAAAAAAAAGACTATTTGC+TGG | + | chr3_3:63477803-63477822 | None:intergenic | 20.0% |
| !! | ATTGTACAAATAAATTGCAA+TGG | + | chr3_3:63478228-63478247 | None:intergenic | 20.0% |
| !! | TCATCTTTATTCAATCAATA+TGG | - | chr3_3:63478320-63478339 | Msa0463900:CDS | 20.0% |
| !! | CATCTTTATTCAATCAATAT+GGG | - | chr3_3:63478321-63478340 | Msa0463900:CDS | 20.0% |
| !! | TGATAATTTATCATTGTACA+AGG | + | chr3_3:63478464-63478483 | None:intergenic | 20.0% |
| ! | TTCTTTCTCAATATGATGTA+AGG | + | chr3_3:63472476-63472495 | None:intergenic | 25.0% |
| ! | ATTCATCTACATTAGGTATA+GGG | + | chr3_3:63472864-63472883 | None:intergenic | 25.0% |
| ! | AATTCATCTACATTAGGTAT+AGG | + | chr3_3:63472865-63472884 | None:intergenic | 25.0% |
| ! | ACCTAATGTAGATGAATTAT+TGG | - | chr3_3:63472867-63472886 | Msa0463900:CDS | 25.0% |
| ! | TCCAATAATTCATCTACATT+AGG | + | chr3_3:63472871-63472890 | None:intergenic | 25.0% |
| ! | GAATTATTGGATGAATTGTA+TGG | - | chr3_3:63472880-63472899 | Msa0463900:CDS | 25.0% |
| ! | TTGAAAAATAGAGTTCATAG+TGG | + | chr3_3:63473064-63473083 | None:intergenic | 25.0% |
| !! | ACAATTGCTTCAATTTTTGA+AGG | + | chr3_3:63473294-63473313 | None:intergenic | 25.0% |
| ! | TTCAAAAATTGAAGCAATTG+TGG | - | chr3_3:63473293-63473312 | Msa0463900:intron | 25.0% |
| !!! | TTTTTAAGTAAATCAGAGAG+AGG | + | chr3_3:63473417-63473436 | None:intergenic | 25.0% |
| !! | GCATAACTTTTTACTAAAGA+AGG | + | chr3_3:63473613-63473632 | None:intergenic | 25.0% |
| !! | ACAAGGTATTCTATTCTATA+AGG | - | chr3_3:63474046-63474065 | Msa0463900:intron | 25.0% |
| !! | CAAGGTATTCTATTCTATAA+GGG | - | chr3_3:63474047-63474066 | Msa0463900:intron | 25.0% |
| !! | AAGGTATTCTATTCTATAAG+GGG | - | chr3_3:63474048-63474067 | Msa0463900:intron | 25.0% |
| ! | TATTTACAATTCTCTTTCCA+AGG | - | chr3_3:63475587-63475606 | Msa0463900:intron | 25.0% |
| !!! | AGTACAACTTTTGCTTTAAA+AGG | - | chr3_3:63475638-63475657 | Msa0463900:intron | 25.0% |
| !!! | GTACAACTTTTGCTTTAAAA+GGG | - | chr3_3:63475639-63475658 | Msa0463900:intron | 25.0% |
| !!! | CATCAAAAAAACATTTTTGG+TGG | - | chr3_3:63475779-63475798 | Msa0463900:intron | 25.0% |
| ! | AGATATATAATATGTCCCTT+CGG | - | chr3_3:63475858-63475877 | Msa0463900:intron | 25.0% |
| ! | TAAAATTAGGGTTGAAATTG+AGG | + | chr3_3:63476166-63476185 | None:intergenic | 25.0% |
| ! | AAAAAGGGGTTGTAAAATTA+GGG | + | chr3_3:63476178-63476197 | None:intergenic | 25.0% |
| !! | TTTTCATCTTCTAATAGCAA+AGG | - | chr3_3:63476295-63476314 | Msa0463900:intron | 25.0% |
| !!! | CCAATTTTTCAACAAAAGTA+TGG | + | chr3_3:63476338-63476357 | None:intergenic | 25.0% |
| !! | CCATACTTTTGTTGAAAAAT+TGG | - | chr3_3:63476335-63476354 | Msa0463900:intron | 25.0% |
| ! | GTAAAAAACTGTACTTATAG+TGG | - | chr3_3:63476430-63476449 | Msa0463900:intron | 25.0% |
| !!! | TACTACTTAATGCTGATTTT+GGG | - | chr3_3:63476467-63476486 | Msa0463900:intron | 25.0% |
| ! | TCATTCATTATGTCAAAACA+TGG | - | chr3_3:63476659-63476678 | Msa0463900:intron | 25.0% |
| !! | AGTTGAACTCTAAATGATTT+TGG | - | chr3_3:63476700-63476719 | Msa0463900:intron | 25.0% |
| ! | ATGAAGTTGAGAGAAAATTT+GGG | - | chr3_3:63476792-63476811 | Msa0463900:intron | 25.0% |
| ! | GTTGTTGAAACAAAAATTTC+AGG | - | chr3_3:63476972-63476991 | Msa0463900:intron | 25.0% |
| ! | TGTTGAAACAAAAATTTCAG+GGG | - | chr3_3:63476974-63476993 | Msa0463900:intron | 25.0% |
| !! | ATTTTTCTTCACAAATCACT+TGG | - | chr3_3:63477111-63477130 | Msa0463900:intron | 25.0% |
| ! | TGTGCTTTGTCATTAAAAAA+AGG | + | chr3_3:63477742-63477761 | None:intergenic | 25.0% |
| !!! | ATCCATAGTTTTTCAATGTA+AGG | - | chr3_3:63477883-63477902 | Msa0463900:intron | 25.0% |
| ! | TACCTTACATTGAAAAACTA+TGG | + | chr3_3:63477888-63477907 | None:intergenic | 25.0% |
| !! | ACCATTTCTTTTTAATATGC+TGG | - | chr3_3:63478135-63478154 | Msa0463900:intron | 25.0% |
| ! | ACCAGCATATTAAAAAGAAA+TGG | + | chr3_3:63478139-63478158 | None:intergenic | 25.0% |
| !! | ATTTCTTTTTAATATGCTGG+TGG | - | chr3_3:63478138-63478157 | Msa0463900:intron | 25.0% |
| !!! | ACATTTCTGGTTTACTATTT+AGG | + | chr3_3:63478201-63478220 | None:intergenic | 25.0% |
| !!! | AAATACACATATTGACTTAG+CGG | - | chr3_3:63478350-63478369 | Msa0463900:CDS | 25.0% |
| ! | AAGAATATGTAGTTGTAACA+GGG | - | chr3_3:63478550-63478569 | Msa0463900:intron | 25.0% |
| TAATATAATTCAACCTCGTG+TGG | - | chr3_3:63472090-63472109 | Msa0463900:intron | 30.0% | |
| TGTGTGTGAATTCAATTAGT+GGG | + | chr3_3:63472339-63472358 | None:intergenic | 30.0% | |
| TTGTGTGTGAATTCAATTAG+TGG | + | chr3_3:63472340-63472359 | None:intergenic | 30.0% | |
| AAACATGAAGCGACAAAATT+GGG | + | chr3_3:63472422-63472441 | None:intergenic | 30.0% | |
| TAAACATGAAGCGACAAAAT+TGG | + | chr3_3:63472423-63472442 | None:intergenic | 30.0% | |
| ATAAAAGAGTAGCTAACTCA+GGG | + | chr3_3:63472546-63472565 | None:intergenic | 30.0% | |
| GAATATGATGATCTTTAGAC+CGG | + | chr3_3:63472615-63472634 | None:intergenic | 30.0% | |
| TTTCACTGTTATTGCGTTAA+GGG | + | chr3_3:63472833-63472852 | None:intergenic | 30.0% | |
| TTCTGGTATATAGCAAGAAT+TGG | - | chr3_3:63473124-63473143 | Msa0463900:intron | 30.0% | |
| TCTGGTATATAGCAAGAATT+GGG | - | chr3_3:63473125-63473144 | Msa0463900:intron | 30.0% | |
| ! | TATGGTCTCATTACCTATTT+TGG | - | chr3_3:63473494-63473513 | Msa0463900:intron | 30.0% |
| ! | TTTTTACTAAAGAAGGCAAG+AGG | + | chr3_3:63473606-63473625 | None:intergenic | 30.0% |
| !! | TTTGAGATTTTGTACAAACC+AGG | - | chr3_3:63473828-63473847 | Msa0463900:intron | 30.0% |
| ! | ATACCTTGTTGTCTTGTAAA+AGG | + | chr3_3:63474035-63474054 | None:intergenic | 30.0% |
| GAATGGAATTCTTGAAGTAA+GGG | + | chr3_3:63474110-63474129 | None:intergenic | 30.0% | |
| AGAATGGAATTCTTGAAGTA+AGG | + | chr3_3:63474111-63474130 | None:intergenic | 30.0% | |
| TACATAATTCCTGACATCTT+TGG | + | chr3_3:63474210-63474229 | None:intergenic | 30.0% | |
| CATCTAATCACAAACCATAT+GGG | - | chr3_3:63474261-63474280 | Msa0463900:intron | 30.0% | |
| !! | AATGAGCTGATTTGGAAAAA+CGG | + | chr3_3:63474397-63474416 | None:intergenic | 30.0% |
| CTATCACTTACAATTGTCTT+TGG | + | chr3_3:63474500-63474519 | None:intergenic | 30.0% | |
| GAATCTTCGTTAGTAAATTC+TGG | - | chr3_3:63474525-63474544 | Msa0463900:intron | 30.0% | |
| !! | AAAGAGATTTTTAGACTCAG+TGG | - | chr3_3:63474548-63474567 | Msa0463900:intron | 30.0% |
| !! | AAGAGATTTTTAGACTCAGT+GGG | - | chr3_3:63474549-63474568 | Msa0463900:intron | 30.0% |
| ! | AGATAGTTTAACCATCGATT+TGG | + | chr3_3:63474680-63474699 | None:intergenic | 30.0% |
| ACAAAGTTATCAAGCCATTT+GGG | + | chr3_3:63475502-63475521 | None:intergenic | 30.0% | |
| !! | TTTCTAGAAGTATCTTCACT+GGG | + | chr3_3:63475527-63475546 | None:intergenic | 30.0% |
| !! | ATTTCTAGAAGTATCTTCAC+TGG | + | chr3_3:63475528-63475547 | None:intergenic | 30.0% |
| !!! | CTTTTGCTTTAAAAGGGAAA+TGG | - | chr3_3:63475645-63475664 | Msa0463900:intron | 30.0% |
| ATGGATGAGAATGTAATGAT+TGG | - | chr3_3:63475664-63475683 | Msa0463900:intron | 30.0% | |
| CAAAAATCTTTCTCTCTTTC+TGG | - | chr3_3:63475702-63475721 | Msa0463900:intron | 30.0% | |
| !!! | TTTTTTTGATGCAAGCACAA+GGG | + | chr3_3:63475770-63475789 | None:intergenic | 30.0% |
| !!! | CAAAAAAACATTTTTGGTGG+AGG | - | chr3_3:63475782-63475801 | Msa0463900:intron | 30.0% |
| GATATATAATATGTCCCTTC+GGG | - | chr3_3:63475859-63475878 | Msa0463900:intron | 30.0% | |
| ATATATAATATGTCCCTTCG+GGG | - | chr3_3:63475860-63475879 | Msa0463900:intron | 30.0% | |
| ! | CTGTATCGTACCAATTTTAT+CGG | + | chr3_3:63475890-63475909 | None:intergenic | 30.0% |
| GATAAAATTGGTACGATACA+GGG | - | chr3_3:63475889-63475908 | Msa0463900:intron | 30.0% | |
| ATGATACGATACTAAGAAGA+AGG | + | chr3_3:63476022-63476041 | None:intergenic | 30.0% | |
| GAAAAAGGGGTTGTAAAATT+AGG | + | chr3_3:63476179-63476198 | None:intergenic | 30.0% | |
| ! | TTACGAGATTGTTGATTGAT+TGG | + | chr3_3:63476274-63476293 | None:intergenic | 30.0% |
| ! | CAAAAGTATGGGTAAAGAAA+AGG | + | chr3_3:63476326-63476345 | None:intergenic | 30.0% |
| !!! | CTACTACTTAATGCTGATTT+TGG | - | chr3_3:63476466-63476485 | Msa0463900:intron | 30.0% |
| !!! | ACTACTTAATGCTGATTTTG+GGG | - | chr3_3:63476468-63476487 | Msa0463900:intron | 30.0% |
| CATGAAGTTGAGAGAAAATT+TGG | - | chr3_3:63476791-63476810 | Msa0463900:intron | 30.0% | |
| ATACCAGTTCTTTCCTTATA+TGG | - | chr3_3:63476859-63476878 | Msa0463900:intron | 30.0% | |
| TACCAGTTCTTTCCTTATAT+GGG | - | chr3_3:63476860-63476879 | Msa0463900:intron | 30.0% | |
| AATTACCATCTTTCGCAAAA+CGG | + | chr3_3:63477079-63477098 | None:intergenic | 30.0% | |
| !! | GCTGTTTTCATAAGATATCT+TGG | - | chr3_3:63477305-63477324 | Msa0463900:intron | 30.0% |
| CATTGTTCATTTGAATGTTG+AGG | - | chr3_3:63477481-63477500 | Msa0463900:intron | 30.0% | |
| ! | TGATGACAAATTCTGGTTAA+AGG | - | chr3_3:63477587-63477606 | Msa0463900:intron | 30.0% |
| ! | GATGACAAATTCTGGTTAAA+GGG | - | chr3_3:63477588-63477607 | Msa0463900:intron | 30.0% |
| !!! | TACTCAGATTTTGATTGATC+AGG | - | chr3_3:63477684-63477703 | Msa0463900:intron | 30.0% |
| ! | AAAAGACTATTTGCTGGTTA+TGG | + | chr3_3:63477797-63477816 | None:intergenic | 30.0% |
| GCTCATAAATATGTTAAGCA+CGG | - | chr3_3:63478007-63478026 | Msa0463900:intron | 30.0% | |
| TCTACTTAGAAACGAAAATC+TGG | + | chr3_3:63478116-63478135 | None:intergenic | 30.0% | |
| !! | AATACACATATTGACTTAGC+GGG | - | chr3_3:63478351-63478370 | Msa0463900:CDS | 30.0% |
| ATCTTATCCAATATGCTCAT+AGG | + | chr3_3:63478502-63478521 | None:intergenic | 30.0% | |
| CTCTTACAATATTACAAGGT+CGG | - | chr3_3:63478527-63478546 | Msa0463900:intron | 30.0% | |
| GAAGAATATGTAGTTGTAAC+AGG | - | chr3_3:63478549-63478568 | Msa0463900:intron | 30.0% | |
| TTTAAACAAACAGAGCCTAA+CGG | - | chr3_3:63478605-63478624 | Msa0463900:intron | 30.0% | |
| ACACATCATACTTAAGATCT+TGG | + | chr3_3:63478910-63478929 | None:intergenic | 30.0% | |
| GTTTCTCAAGTTACCTATTG+AGG | - | chr3_3:63472117-63472136 | Msa0463900:intron | 35.0% | |
| AACTCACCAGCAAGTATTAT+AGG | + | chr3_3:63472214-63472233 | None:intergenic | 35.0% | |
| GAATTGGCAGGATAAACATA+GGG | + | chr3_3:63472246-63472265 | None:intergenic | 35.0% | |
| TGAATTGGCAGGATAAACAT+AGG | + | chr3_3:63472247-63472266 | None:intergenic | 35.0% | |
| ATGTTTATCCTGCCAATTCA+TGG | - | chr3_3:63472247-63472266 | Msa0463900:intron | 35.0% | |
| ! | GATTTAGAGTCTGTAACCAT+TGG | + | chr3_3:63472294-63472313 | None:intergenic | 35.0% |
| ! | TCTAAAACCATCACACTTAC+TGG | - | chr3_3:63472361-63472380 | Msa0463900:intron | 35.0% |
| TTGAATACCAGTAAGTGTGA+TGG | + | chr3_3:63472371-63472390 | None:intergenic | 35.0% | |
| GATAAAAGAGTAGCTAACTC+AGG | + | chr3_3:63472547-63472566 | None:intergenic | 35.0% | |
| ! | TATTGGTCATGAGTGTTTTC+TGG | + | chr3_3:63472693-63472712 | None:intergenic | 35.0% |
| CTCCTAGTAAAGAAGAAAGA+TGG | - | chr3_3:63472778-63472797 | Msa0463900:intron | 35.0% | |
| TGCCATCTTTCTTCTTTACT+AGG | + | chr3_3:63472783-63472802 | None:intergenic | 35.0% | |
| TAAAGAAGAAAGATGGCACA+TGG | - | chr3_3:63472785-63472804 | Msa0463900:intron | 35.0% | |
| CTTTCACTGTTATTGCGTTA+AGG | + | chr3_3:63472834-63472853 | None:intergenic | 35.0% | |
| !!! | TTTTTTCTAAGCTGGACCTA+CGG | - | chr3_3:63472911-63472930 | Msa0463900:CDS | 35.0% |
| !! | ATTTAAGACTGCTTTTCGCA+CGG | - | chr3_3:63472972-63472991 | Msa0463900:intron | 35.0% |
| GGTGCATTAGATAATCCAAA+GGG | + | chr3_3:63473027-63473046 | None:intergenic | 35.0% | |
| TGGTGCATTAGATAATCCAA+AGG | + | chr3_3:63473028-63473047 | None:intergenic | 35.0% | |
| TAATGCACCATCTACATTTC+AGG | - | chr3_3:63473038-63473057 | Msa0463900:intron | 35.0% | |
| AAGTACCCTAAATGTCAGTT+TGG | - | chr3_3:63473210-63473229 | Msa0463900:intron | 35.0% | |
| AGTACCCTAAATGTCAGTTT+GGG | - | chr3_3:63473211-63473230 | Msa0463900:intron | 35.0% | |
| AAATTGAAGCAATTGTGGCT+TGG | - | chr3_3:63473298-63473317 | Msa0463900:intron | 35.0% | |
| TAAAAACCTCACAGCTCTTA+GGG | - | chr3_3:63473329-63473348 | Msa0463900:intron | 35.0% | |
| CTGCATAATTGCGAACAAAA+CGG | + | chr3_3:63473383-63473402 | None:intergenic | 35.0% | |
| CAAACTCCTGCAGAAAATTA+GGG | + | chr3_3:63473524-63473543 | None:intergenic | 35.0% | |
| TCAAACTCCTGCAGAAAATT+AGG | + | chr3_3:63473525-63473544 | None:intergenic | 35.0% | |
| ! | TAATTTTCTGCAGGAGTTTG+AGG | - | chr3_3:63473524-63473543 | Msa0463900:intron | 35.0% |
| AAACGTTAGCACAACAGAAA+TGG | - | chr3_3:63473781-63473800 | Msa0463900:intron | 35.0% | |
| CAAACCAGGAAAAGAAAATG+TGG | - | chr3_3:63473842-63473861 | Msa0463900:CDS | 35.0% | |
| ! | TTTTATCAGCTTCACGAAGT+TGG | - | chr3_3:63473960-63473979 | Msa0463900:intron | 35.0% |
| TTTATCAGCTTCACGAAGTT+GGG | - | chr3_3:63473961-63473980 | Msa0463900:intron | 35.0% | |
| TGTTGTCTTGTAAAAGGTGA+TGG | + | chr3_3:63474029-63474048 | None:intergenic | 35.0% | |
| ! | TCACCTTTTACAAGACAACA+AGG | - | chr3_3:63474029-63474048 | Msa0463900:intron | 35.0% |
| AATTCCATTCTTCCACTGTT+GGG | - | chr3_3:63474120-63474139 | Msa0463900:CDS | 35.0% | |
| AAAAACATGTGAAACCTGTC+AGG | - | chr3_3:63474229-63474248 | Msa0463900:intron | 35.0% | |
| GCATCTAATCACAAACCATA+TGG | - | chr3_3:63474260-63474279 | Msa0463900:intron | 35.0% | |
| CAACGGAAAAACAGCAATTT+GGG | - | chr3_3:63474361-63474380 | Msa0463900:intron | 35.0% | |
| AGGAATGAAATGAGCTGATT+TGG | + | chr3_3:63474405-63474424 | None:intergenic | 35.0% | |
| TAAAGACACAGCAGTGTAAT+TGG | + | chr3_3:63474435-63474454 | None:intergenic | 35.0% | |
| ATATAGGTTGCAACAGACAA+CGG | + | chr3_3:63474785-63474804 | None:intergenic | 35.0% | |
| AGGCTACTGAAGGAAAATTT+GGG | - | chr3_3:63474866-63474885 | Msa0463900:intron | 35.0% | |
| ACAACAAAGGATGACATCTA+TGG | - | chr3_3:63474895-63474914 | Msa0463900:intron | 35.0% | |
| TTATGAGCTCAAGTTAAACC+CGG | - | chr3_3:63475078-63475097 | Msa0463900:intron | 35.0% | |
| TTGTCCTCAAGTTTAACCAA+AGG | + | chr3_3:63475352-63475371 | None:intergenic | 35.0% | |
| CAGACAAAATCCTAAATGAG+CGG | - | chr3_3:63475401-63475420 | Msa0463900:intron | 35.0% | |
| CAGTTGAATCAGTTGCAAAA+GGG | - | chr3_3:63475425-63475444 | Msa0463900:intron | 35.0% | |
| CACAAAGTTATCAAGCCATT+TGG | + | chr3_3:63475503-63475522 | None:intergenic | 35.0% | |
| !!! | GTTTTTTTGATGCAAGCACA+AGG | + | chr3_3:63475771-63475790 | None:intergenic | 35.0% |
| CGATAAAATTGGTACGATAC+AGG | - | chr3_3:63475888-63475907 | Msa0463900:intron | 35.0% | |
| AATTAGGGTTGAAATTGAGG+AGG | + | chr3_3:63476163-63476182 | None:intergenic | 35.0% | |
| AAGTTGAGAGAAAATTTGGG+TGG | - | chr3_3:63476795-63476814 | Msa0463900:intron | 35.0% | |
| TACCCATATAAGGAAAGAAC+TGG | + | chr3_3:63476865-63476884 | None:intergenic | 35.0% | |
| GGATGATCAATACCCATATA+AGG | + | chr3_3:63476875-63476894 | None:intergenic | 35.0% | |
| TTTGTTTCAACAACACTGTC+AGG | + | chr3_3:63476966-63476985 | None:intergenic | 35.0% | |
| GGAAAATTTGATGCATCAGT+CGG | - | chr3_3:63476995-63477014 | Msa0463900:intron | 35.0% | |
| ! | TCAAGGATCCCTTGTTTAAA+AGG | - | chr3_3:63477033-63477052 | Msa0463900:intron | 35.0% |
| ! | GATCCCTTGTTTAAAAGGAT+GGG | - | chr3_3:63477038-63477057 | Msa0463900:intron | 35.0% |
| ATTACCATCTTTCGCAAAAC+GGG | + | chr3_3:63477078-63477097 | None:intergenic | 35.0% | |
| TTTATAACTATGACCCTGTC+AGG | - | chr3_3:63477151-63477170 | Msa0463900:intron | 35.0% | |
| TTCAATATATGAGGCCTGTT+TGG | + | chr3_3:63477448-63477467 | None:intergenic | 35.0% | |
| ACAACGTGCTTCAATATATG+AGG | + | chr3_3:63477457-63477476 | None:intergenic | 35.0% | |
| TCATATATTGAAGCACGTTG+TGG | - | chr3_3:63477456-63477475 | Msa0463900:intron | 35.0% | |
| TGGTTAAAGGGAAGAGTTTA+TGG | - | chr3_3:63477600-63477619 | Msa0463900:intron | 35.0% | |
| GGTTAAAGGGAAGAGTTTAT+GGG | - | chr3_3:63477601-63477620 | Msa0463900:intron | 35.0% | |
| GTTAAAGGGAAGAGTTTATG+GGG | - | chr3_3:63477602-63477621 | Msa0463900:intron | 35.0% | |
| TTAAAGGGAAGAGTTTATGG+GGG | - | chr3_3:63477603-63477622 | Msa0463900:intron | 35.0% | |
| AGTAACTGTTTCAGTCTTTC+AGG | + | chr3_3:63477668-63477687 | None:intergenic | 35.0% | |
| TGCTTTCATCTTTGAGCAAA+AGG | + | chr3_3:63477953-63477972 | None:intergenic | 35.0% | |
| ! | TTTTGCTCAAAGATGAAAGC+AGG | - | chr3_3:63477952-63477971 | Msa0463900:intron | 35.0% |
| AGGATGAAGATAGTTGAGTT+GGG | - | chr3_3:63477972-63477991 | Msa0463900:intron | 35.0% | |
| ATCTGGCAAGTAATATGCAT+AGG | + | chr3_3:63478099-63478118 | None:intergenic | 35.0% | |
| GGAGTTACTACTACTACTAT+TGG | + | chr3_3:63478173-63478192 | None:intergenic | 35.0% | |
| TAGTAGTAGTAGTAACTCCA+TGG | - | chr3_3:63478174-63478193 | Msa0463900:intron | 35.0% | |
| ! | TGGTTTACTATTTAGGACCA+TGG | + | chr3_3:63478194-63478213 | None:intergenic | 35.0% |
| TTGCAATGGATGAACATTTC+TGG | + | chr3_3:63478214-63478233 | None:intergenic | 35.0% | |
| !! | ATAAGGTGCTTTGGTAGTTT+TGG | + | chr3_3:63478434-63478453 | None:intergenic | 35.0% |
| TTGTACAAGGACTACTGATA+AGG | + | chr3_3:63478451-63478470 | None:intergenic | 35.0% | |
| ATCTTGTCCTATGAGCATAT+TGG | - | chr3_3:63478492-63478511 | Msa0463900:intron | 35.0% | |
| CCTTGTAATATTGTAAGAGC+TGG | + | chr3_3:63478526-63478545 | None:intergenic | 35.0% | |
| CCAGCTCTTACAATATTACA+AGG | - | chr3_3:63478523-63478542 | Msa0463900:intron | 35.0% | |
| CAGACACATTTGATATGCTA+GGG | + | chr3_3:63478688-63478707 | None:intergenic | 35.0% | |
| !! | TCTGCAGTCTTTTAACTGAT+GGG | - | chr3_3:63478704-63478723 | Msa0463900:intron | 35.0% |
| TTTCCTACTGTCACAGAGAA+AGG | + | chr3_3:63472151-63472170 | None:intergenic | 40.0% | |
| TTCTCTGTGACAGTAGGAAA+TGG | - | chr3_3:63472151-63472170 | Msa0463900:intron | 40.0% | |
| TCTCTGTGACAGTAGGAAAT+GGG | - | chr3_3:63472152-63472171 | Msa0463900:intron | 40.0% | |
| GCAGGATAAACATAGGGATA+TGG | + | chr3_3:63472240-63472259 | None:intergenic | 40.0% | |
| ATGATGTAAGGACACAGTGT+GGG | + | chr3_3:63472464-63472483 | None:intergenic | 40.0% | |
| TATGATGTAAGGACACAGTG+TGG | + | chr3_3:63472465-63472484 | None:intergenic | 40.0% | |
| TTTGTGGTAAAGGATGGCAA+GGG | + | chr3_3:63472522-63472541 | None:intergenic | 40.0% | |
| ! | TTTTGTGGTAAAGGATGGCA+AGG | + | chr3_3:63472523-63472542 | None:intergenic | 40.0% |
| !! | AACTCAGGGTTTTGTGGTAA+AGG | + | chr3_3:63472532-63472551 | None:intergenic | 40.0% |
| ! | GATGTGTTTGAGATTCCCAA+AGG | - | chr3_3:63472577-63472596 | Msa0463900:intron | 40.0% |
| ATGATGATCTTTAGACCGGT+GGG | + | chr3_3:63472611-63472630 | None:intergenic | 40.0% | |
| TATGATGATCTTTAGACCGG+TGG | + | chr3_3:63472612-63472631 | None:intergenic | 40.0% | |
| ACATTTACTGGAGAAGAGGT+GGG | + | chr3_3:63472646-63472665 | None:intergenic | 40.0% | |
| GAGCATGTCTTGGATCATAT+TGG | + | chr3_3:63472710-63472729 | None:intergenic | 40.0% | |
| GAAGAAAAAGGGCTGATACT+AGG | + | chr3_3:63472751-63472770 | None:intergenic | 40.0% | |
| ! | TTCTTCTTTACTAGGAGCAC+AGG | + | chr3_3:63472775-63472794 | None:intergenic | 40.0% |
| !! | GAGATTTTGCGTGGATTACA+GGG | - | chr3_3:63472807-63472826 | Msa0463900:intron | 40.0% |
| !!! | CTCCACTGTTTTTTCTAAGC+TGG | - | chr3_3:63472903-63472922 | Msa0463900:CDS | 40.0% |
| GTCCAGCTTAGAAAAAACAG+TGG | + | chr3_3:63472908-63472927 | None:intergenic | 40.0% | |
| ! | TTTTTCTAAGCTGGACCTAC+GGG | - | chr3_3:63472912-63472931 | Msa0463900:CDS | 40.0% |
| GCAGTCTTAAATGTGTCTTC+TGG | + | chr3_3:63472964-63472983 | None:intergenic | 40.0% | |
| ATAGTGGCCTGAAATGTAGA+TGG | + | chr3_3:63473048-63473067 | None:intergenic | 40.0% | |
| !!! | CGTCTTTTTCGACGATATTC+TGG | - | chr3_3:63473107-63473126 | Msa0463900:intron | 40.0% |
| !!! | GATGTTGTTTTAGTGTGTCC+AGG | + | chr3_3:63473179-63473198 | None:intergenic | 40.0% |
| GTACCCTAAATGTCAGTTTG+GGG | - | chr3_3:63473212-63473231 | Msa0463900:intron | 40.0% | |
| GTACCCCAAACTGACATTTA+GGG | + | chr3_3:63473218-63473237 | None:intergenic | 40.0% | |
| !! | GTACCTCAGGTGGATTATTT+GGG | - | chr3_3:63473234-63473253 | Msa0463900:intron | 40.0% |
| !! | TACCTCAGGTGGATTATTTG+GGG | - | chr3_3:63473235-63473254 | Msa0463900:intron | 40.0% |
| ! | CTAAGAGCTGTGAGGTTTTT+AGG | + | chr3_3:63473330-63473349 | None:intergenic | 40.0% |
| CTAAAAACCTCACAGCTCTT+AGG | - | chr3_3:63473328-63473347 | Msa0463900:intron | 40.0% | |
| AAAAACCTCACAGCTCTTAG+GGG | - | chr3_3:63473330-63473349 | Msa0463900:intron | 40.0% | |
| !! | TTAAAAAGAGTGCCTTCAGC+TGG | - | chr3_3:63473430-63473449 | Msa0463900:intron | 40.0% |
| TGAAGATCTCAAGCATGCTA+TGG | - | chr3_3:63473476-63473495 | Msa0463900:intron | 40.0% | |
| !! | AAATTAGGGAGCGCCAAAAT+AGG | + | chr3_3:63473510-63473529 | None:intergenic | 40.0% |
| ACTAAAGAAGGCAAGAGGTT+GGG | + | chr3_3:63473601-63473620 | None:intergenic | 40.0% | |
| TACTAAAGAAGGCAAGAGGT+TGG | + | chr3_3:63473602-63473621 | None:intergenic | 40.0% | |
| TTACAGAAGCAGTGAAGAAG+TGG | - | chr3_3:63473679-63473698 | Msa0463900:intron | 40.0% | |
| ! | TTTGAATGGTTTGTGACAGC+AGG | + | chr3_3:63473764-63473783 | None:intergenic | 40.0% |
| CTGTTGTGCTAACGTTTGAA+TGG | + | chr3_3:63473778-63473797 | None:intergenic | 40.0% | |
| AAAGTCATAGCCAAGAAGCT+TGG | + | chr3_3:63473811-63473830 | None:intergenic | 40.0% | |
| ! | GCTACCACATTTTCTTTTCC+TGG | + | chr3_3:63473849-63473868 | None:intergenic | 40.0% |
| GGAATCATCAGAGGTAATTC+TGG | + | chr3_3:63473883-63473902 | None:intergenic | 40.0% | |
| AATTACCTCTGATGATTCCC+CGG | - | chr3_3:63473884-63473903 | Msa0463900:CDS | 40.0% | |
| !! | GTGCGTAATTTGCTTTCTTC+AGG | + | chr3_3:63474086-63474105 | None:intergenic | 40.0% |
| GAATTCCATTCTTCCACTGT+TGG | - | chr3_3:63474119-63474138 | Msa0463900:CDS | 40.0% | |
| ATTCCATTCTTCCACTGTTG+GGG | - | chr3_3:63474121-63474140 | Msa0463900:CDS | 40.0% | |
| CTGACATCTTTGGTCATGTT+TGG | + | chr3_3:63474200-63474219 | None:intergenic | 40.0% | |
| CAAACATGACCAAAGATGTC+AGG | - | chr3_3:63474198-63474217 | Msa0463900:intron | 40.0% | |
| !! | AGATGCTTTATTTGCCTGAC+AGG | + | chr3_3:63474246-63474265 | None:intergenic | 40.0% |
| !!! | ATTGCTGTTTTTCCGTTGGA+TGG | + | chr3_3:63474359-63474378 | None:intergenic | 40.0% |
| !!! | CCAAATTGCTGTTTTTCCGT+TGG | + | chr3_3:63474363-63474382 | None:intergenic | 40.0% |
| CCAACGGAAAAACAGCAATT+TGG | - | chr3_3:63474360-63474379 | Msa0463900:intron | 40.0% | |
| CATATCATCCAGAGTCTGAT+GGG | - | chr3_3:63474594-63474613 | Msa0463900:intron | 40.0% | |
| GCAGGTATGTTTGTAGTATG+CGG | + | chr3_3:63474637-63474656 | None:intergenic | 40.0% | |
| AATTGTACCAGAACTCAGCA+AGG | + | chr3_3:63474706-63474725 | None:intergenic | 40.0% | |
| TCTGTTGCAACCTATATCAG+TGG | - | chr3_3:63474788-63474807 | Msa0463900:intron | 40.0% | |
| GAGGCTACTGAAGGAAAATT+TGG | - | chr3_3:63474865-63474884 | Msa0463900:intron | 40.0% | |
| ACTGAAGGAAAATTTGGGCA+AGG | - | chr3_3:63474871-63474890 | Msa0463900:intron | 40.0% | |
| CATCTATGGCAAATCAACAC+AGG | - | chr3_3:63474909-63474928 | Msa0463900:intron | 40.0% | |
| ACAAACTTCCTGCTAAGCTT+GGG | + | chr3_3:63475019-63475038 | None:intergenic | 40.0% | |
| AAGCTTAGCAGGAAGTTTGT+GGG | - | chr3_3:63475019-63475038 | Msa0463900:intron | 40.0% | |
| TTGAGACGTGAAAAACAGGA+TGG | + | chr3_3:63475114-63475133 | None:intergenic | 40.0% | |
| !! | AGCTTTGAGACGTGAAAAAC+AGG | + | chr3_3:63475118-63475137 | None:intergenic | 40.0% |
| ! | TCAAAGCTTCGACCTTTTCA+TGG | - | chr3_3:63475130-63475149 | Msa0463900:intron | 40.0% |
| GTTGACAGTTGTGCTAGTAA+CGG | + | chr3_3:63475191-63475210 | None:intergenic | 40.0% | |
| ! | AGGACAAGTTTGTTCTCCAA+GGG | - | chr3_3:63475365-63475384 | Msa0463900:intron | 40.0% |
| !! | CCTTTTGCAACTGATTCAAC+TGG | + | chr3_3:63475427-63475446 | None:intergenic | 40.0% |
| CCAGTTGAATCAGTTGCAAA+AGG | - | chr3_3:63475424-63475443 | Msa0463900:intron | 40.0% | |
| TAGTGGTTATTCTCTTGCTG+CGG | + | chr3_3:63475477-63475496 | None:intergenic | 40.0% | |
| GAATAACCACTAAGCCCAAA+TGG | - | chr3_3:63475485-63475504 | Msa0463900:intron | 40.0% | |
| CTCATGTGCTAACACATGTA+TGG | + | chr3_3:63475562-63475581 | None:intergenic | 40.0% | |
| AGAAATAGGACAAGTGTCCT+TGG | + | chr3_3:63475607-63475626 | None:intergenic | 40.0% | |
| TGCAAGCACAAGGGTAAAAA+GGG | + | chr3_3:63475761-63475780 | None:intergenic | 40.0% | |
| ATGCAAGCACAAGGGTAAAA+AGG | + | chr3_3:63475762-63475781 | None:intergenic | 40.0% | |
| TTAGTTTACTCATGGTCCGT+CGG | - | chr3_3:63475951-63475970 | Msa0463900:intron | 40.0% | |
| CGATACTAAGAAGAAGGATC+CGG | + | chr3_3:63476016-63476035 | None:intergenic | 40.0% | |
| GTTAGAGAATTGAGCTGCAA+CGG | + | chr3_3:63476123-63476142 | None:intergenic | 40.0% | |
| TTTACCACACTTGTGATCGA+AGG | - | chr3_3:63476511-63476530 | Msa0463900:intron | 40.0% | |
| !! | GCAGCAAAACTTTTGAAAGC+TGG | + | chr3_3:63476896-63476915 | None:intergenic | 40.0% |
| AAGCTTCTGTTTACTCTTGC+TGG | - | chr3_3:63476934-63476953 | Msa0463900:intron | 40.0% | |
| ! | GGATCCCTTGTTTAAAAGGA+TGG | - | chr3_3:63477037-63477056 | Msa0463900:intron | 40.0% |
| ! | GCTCCCATCCTTTTAAACAA+GGG | + | chr3_3:63477044-63477063 | None:intergenic | 40.0% |
| ! | AGCTCCCATCCTTTTAAACA+AGG | + | chr3_3:63477045-63477064 | None:intergenic | 40.0% |
| GCTTATCCAAATTCCTGACA+GGG | + | chr3_3:63477167-63477186 | None:intergenic | 40.0% | |
| TGCTTATCCAAATTCCTGAC+AGG | + | chr3_3:63477168-63477187 | None:intergenic | 40.0% | |
| AAGCACTAGTGAGACAGTTT+GGG | + | chr3_3:63477395-63477414 | None:intergenic | 40.0% | |
| TAAGCACTAGTGAGACAGTT+TGG | + | chr3_3:63477396-63477415 | None:intergenic | 40.0% | |
| TCAAATCAGCCAATCCAAAC+AGG | - | chr3_3:63477431-63477450 | Msa0463900:intron | 40.0% | |
| TATATGAGGCCTGTTTGGAT+TGG | + | chr3_3:63477443-63477462 | None:intergenic | 40.0% | |
| GCTGATGTGATGACAAATTC+TGG | - | chr3_3:63477580-63477599 | Msa0463900:intron | 40.0% | |
| CAGGATGAAGATAGTTGAGT+TGG | - | chr3_3:63477971-63477990 | Msa0463900:intron | 40.0% | |
| !! | ATGAAGATAGTTGAGTTGGG+TGG | - | chr3_3:63477975-63477994 | Msa0463900:intron | 40.0% |
| ATAAGGGTTGGAGAGATAAG+GGG | + | chr3_3:63478399-63478418 | None:intergenic | 40.0% | |
| CATAAGGGTTGGAGAGATAA+GGG | + | chr3_3:63478400-63478419 | None:intergenic | 40.0% | |
| ACATAAGGGTTGGAGAGATA+AGG | + | chr3_3:63478401-63478420 | None:intergenic | 40.0% | |
| TTGGAGAGTGAGGAACATAA+GGG | + | chr3_3:63478415-63478434 | None:intergenic | 40.0% | |
| TTTGGAGAGTGAGGAACATA+AGG | + | chr3_3:63478416-63478435 | None:intergenic | 40.0% | |
| !!! | TTTGGTAGTTTTGGAGAGTG+AGG | + | chr3_3:63478425-63478444 | None:intergenic | 40.0% |
| ! | GAGTGTGAATTTTTGCCGTT+AGG | + | chr3_3:63478623-63478642 | None:intergenic | 40.0% |
| !! | CACTCACTAAGTGCTGAAAA+AGG | - | chr3_3:63478638-63478657 | Msa0463900:intron | 40.0% |
| !! | TCACTAAGTGCTGAAAAAGG+AGG | - | chr3_3:63478641-63478660 | Msa0463900:intron | 40.0% |
| ACATTTGATATGCTAGGGTG+CGG | + | chr3_3:63478683-63478702 | None:intergenic | 40.0% | |
| GCAGACACATTTGATATGCT+AGG | + | chr3_3:63478689-63478708 | None:intergenic | 40.0% | |
| !! | GTCTGCAGTCTTTTAACTGA+TGG | - | chr3_3:63478703-63478722 | Msa0463900:intron | 40.0% |
| AGCGGACCTAATAACTGAAA+CGG | + | chr3_3:63478828-63478847 | None:intergenic | 40.0% | |
| CTACTGTCACAGAGAAAGGA+GGG | + | chr3_3:63472147-63472166 | None:intergenic | 45.0% | |
| GGGCAAGCTATTCATTGTCA+AGG | - | chr3_3:63472172-63472191 | Msa0463900:intron | 45.0% | |
| GCAGTGCCTATAATACTTGC+TGG | - | chr3_3:63472205-63472224 | Msa0463900:intron | 45.0% | |
| ACCACATCAGCACCATGAAT+TGG | + | chr3_3:63472262-63472281 | None:intergenic | 45.0% | |
| !!! | TCATGGTGCTGATGTGGTTT+TGG | - | chr3_3:63472264-63472283 | Msa0463900:intron | 45.0% |
| !!! | CATGGTGCTGATGTGGTTTT+GGG | - | chr3_3:63472265-63472284 | Msa0463900:intron | 45.0% |
| !!! | ATGGTGCTGATGTGGTTTTG+GGG | - | chr3_3:63472266-63472285 | Msa0463900:intron | 45.0% |
| GCGACAAAATTGGGCAAAAG+AGG | + | chr3_3:63472413-63472432 | None:intergenic | 45.0% | |
| CAAGGGTGAATTGCTTCACT+AGG | + | chr3_3:63472505-63472524 | None:intergenic | 45.0% | |
| !! | CAGGGTTTTGTGGTAAAGGA+TGG | + | chr3_3:63472528-63472547 | None:intergenic | 45.0% |
| ! | GTAGCTAACTCAGGGTTTTG+TGG | + | chr3_3:63472538-63472557 | None:intergenic | 45.0% |
| TGATGATCTTTAGACCGGTG+GGG | + | chr3_3:63472610-63472629 | None:intergenic | 45.0% | |
| CACATTTACTGGAGAAGAGG+TGG | + | chr3_3:63472647-63472666 | None:intergenic | 45.0% | |
| GGCAGTGAGGATAACGATAT+GGG | + | chr3_3:63472672-63472691 | None:intergenic | 45.0% | |
| TGGCAGTGAGGATAACGATA+TGG | + | chr3_3:63472673-63472692 | None:intergenic | 45.0% | |
| !! | ATGAGTGTTTTCTGGCAGTG+AGG | + | chr3_3:63472685-63472704 | None:intergenic | 45.0% |
| ATCCAAGACATGCTCAGAGA+CGG | - | chr3_3:63472715-63472734 | Msa0463900:intron | 45.0% | |
| GGCTGATACTAGGTTTGATG+AGG | + | chr3_3:63472741-63472760 | None:intergenic | 45.0% | |
| GGAGCACAGGAGAAGAAAAA+GGG | + | chr3_3:63472762-63472781 | None:intergenic | 45.0% | |
| ! | AGGAGCACAGGAGAAGAAAA+AGG | + | chr3_3:63472763-63472782 | None:intergenic | 45.0% |
| !! | GGAGATTTTGCGTGGATTAC+AGG | - | chr3_3:63472806-63472825 | Msa0463900:intron | 45.0% |
| !! | CTTCTGGTGCTACACGAATT+TGG | + | chr3_3:63472948-63472967 | None:intergenic | 45.0% |
| ! | ATAATCCAAAGGGCATGACC+AGG | + | chr3_3:63473017-63473036 | None:intergenic | 45.0% |
| GGTACCCCAAACTGACATTT+AGG | + | chr3_3:63473219-63473238 | None:intergenic | 45.0% | |
| !! | GGTACCTCAGGTGGATTATT+TGG | - | chr3_3:63473233-63473252 | Msa0463900:intron | 45.0% |
| GGGCATATCATATCAGCCAA+GGG | - | chr3_3:63473255-63473274 | Msa0463900:intron | 45.0% | |
| GGCATATCATATCAGCCAAG+GGG | - | chr3_3:63473256-63473275 | Msa0463900:intron | 45.0% | |
| GCATATCATATCAGCCAAGG+GGG | - | chr3_3:63473257-63473276 | Msa0463900:intron | 45.0% | |
| ! | ACAGCTCTTAGGGGTTTTCT+AGG | - | chr3_3:63473339-63473358 | Msa0463900:intron | 45.0% |
| TGAGGTGACAACTGATGCTT+CGG | - | chr3_3:63473542-63473561 | Msa0463900:intron | 45.0% | |
| TTGGGATAAGACTGCTCCAA+TGG | + | chr3_3:63473574-63473593 | None:intergenic | 45.0% | |
| ! | ATTGGAGCAGTCTTATCCCA+AGG | - | chr3_3:63473573-63473592 | Msa0463900:intron | 45.0% |
| TGCTTATGACAGAGAGATGC+TGG | - | chr3_3:63473653-63473672 | Msa0463900:intron | 45.0% | |
| AATGACGACCTAGCAGGTAT+TGG | + | chr3_3:63473707-63473726 | None:intergenic | 45.0% | |
| GCAGGTTCTTGAGACTTCTA+TGG | + | chr3_3:63473746-63473765 | None:intergenic | 45.0% | |
| AAATGGCTCACCAAGCTTCT+TGG | - | chr3_3:63473798-63473817 | Msa0463900:intron | 45.0% | |
| TGGATATAGCAGTGTACACC+GGG | + | chr3_3:63473905-63473924 | None:intergenic | 45.0% | |
| GTGGATATAGCAGTGTACAC+CGG | + | chr3_3:63473906-63473925 | None:intergenic | 45.0% | |
| TGTAAGCAAGAGAGGTTGAC+AGG | + | chr3_3:63473928-63473947 | None:intergenic | 45.0% | |
| TTCCATTCTTCCACTGTTGG+GGG | - | chr3_3:63474122-63474141 | Msa0463900:CDS | 45.0% | |
| AGGCAAAAACTGCTGCAAGA+CGG | + | chr3_3:63474175-63474194 | None:intergenic | 45.0% | |
| ATCTTTGGTCATGTTTGGCC+AGG | + | chr3_3:63474195-63474214 | None:intergenic | 45.0% | |
| ACATGTTGTGGAATTGGCAG+TGG | + | chr3_3:63474296-63474315 | None:intergenic | 45.0% | |
| TGCCAATTCCACAACATGTC+TGG | - | chr3_3:63474297-63474316 | Msa0463900:intron | 45.0% | |
| GCCAATTCCACAACATGTCT+GGG | - | chr3_3:63474298-63474317 | Msa0463900:intron | 45.0% | |
| TCCCAGACATGTTGTGGAAT+TGG | + | chr3_3:63474302-63474321 | None:intergenic | 45.0% | |
| AATTCCACAACATGTCTGGG+AGG | - | chr3_3:63474301-63474320 | Msa0463900:intron | 45.0% | |
| GCAGTGTAATTGGTAGGCAA+AGG | + | chr3_3:63474425-63474444 | None:intergenic | 45.0% | |
| GACACAGCAGTGTAATTGGT+AGG | + | chr3_3:63474431-63474450 | None:intergenic | 45.0% | |
| ATAGACTTCGGTGAGGAACA+GGG | + | chr3_3:63474462-63474481 | None:intergenic | 45.0% | |
| TTGTCTTTGGCATTCCGTGA+AGG | + | chr3_3:63474487-63474506 | None:intergenic | 45.0% | |
| GCATATCATCCAGAGTCTGA+TGG | - | chr3_3:63474593-63474612 | Msa0463900:intron | 45.0% | |
| ATCTTCACCTTGCTGAGTTC+TGG | - | chr3_3:63474696-63474715 | Msa0463900:intron | 45.0% | |
| TCTCCATTCCAGGCTGTTTA+TGG | - | chr3_3:63474752-63474771 | Msa0463900:intron | 45.0% | |
| CTGAGCTGATCCACTGATAT+AGG | + | chr3_3:63474801-63474820 | None:intergenic | 45.0% | |
| TGGATCAGCTCAGATTGCAA+CGG | - | chr3_3:63474808-63474827 | Msa0463900:CDS | 45.0% | |
| ATTTGGGCAAGGCACAACAA+AGG | - | chr3_3:63474882-63474901 | Msa0463900:intron | 45.0% | |
| AATCTCCCACCTGAAACTGA+CGG | + | chr3_3:63474940-63474959 | None:intergenic | 45.0% | |
| ! | TCAGTTTCAGGTGGGAGATT+GGG | - | chr3_3:63474940-63474959 | Msa0463900:intron | 45.0% |
| TTTACGGTGGTCTGACGATA+CGG | + | chr3_3:63474983-63475002 | None:intergenic | 45.0% | |
| TATCGTCAGACCACCGTAAA+AGG | - | chr3_3:63474983-63475002 | Msa0463900:intron | 45.0% | |
| ATCGTCAGACCACCGTAAAA+GGG | - | chr3_3:63474984-63475003 | Msa0463900:intron | 45.0% | |
| CACAAACTTCCTGCTAAGCT+TGG | + | chr3_3:63475020-63475039 | None:intergenic | 45.0% | |
| CAAGCTTAGCAGGAAGTTTG+TGG | - | chr3_3:63475018-63475037 | Msa0463900:intron | 45.0% | |
| TACTAGCACAACTGTCAACC+TGG | - | chr3_3:63475192-63475211 | Msa0463900:intron | 45.0% | |
| CTGGATCCAGATCAGATCTT+GGG | - | chr3_3:63475211-63475230 | Msa0463900:intron | 45.0% | |
| TTCAACAGCTGTTGGTCAAG+TGG | - | chr3_3:63475266-63475285 | Msa0463900:intron | 45.0% | |
| GTTGGTCAAGTGGAAAGGTT+TGG | - | chr3_3:63475276-63475295 | Msa0463900:intron | 45.0% | |
| GTGGCCTTTGGTTAAACTTG+AGG | - | chr3_3:63475345-63475364 | Msa0463900:intron | 45.0% | |
| ! | GAGGACAAGTTTGTTCTCCA+AGG | - | chr3_3:63475364-63475383 | Msa0463900:intron | 45.0% |
| ! | GGACAAGTTTGTTCTCCAAG+GGG | - | chr3_3:63475366-63475385 | Msa0463900:intron | 45.0% |
| ! | GACAAGTTTGTTCTCCAAGG+GGG | - | chr3_3:63475367-63475386 | Msa0463900:intron | 45.0% |
| CTGTATCATTACTACCCCCT+TGG | + | chr3_3:63475384-63475403 | None:intergenic | 45.0% | |
| ATTCAACTGGCCGCTCATTT+AGG | + | chr3_3:63475414-63475433 | None:intergenic | 45.0% | |
| TGAATCAGTTGCAAAAGGGC+CGG | - | chr3_3:63475429-63475448 | Msa0463900:intron | 45.0% | |
| ATCAAGCCATTTGGGCTTAG+TGG | + | chr3_3:63475494-63475513 | None:intergenic | 45.0% | |
| ! | TTTTATCGGATGTCCCCGAA+GGG | + | chr3_3:63475876-63475895 | None:intergenic | 45.0% |
| ! | ATTTTATCGGATGTCCCCGA+AGG | + | chr3_3:63475877-63475896 | None:intergenic | 45.0% |
| TCGGGGACATCCGATAAAAT+TGG | - | chr3_3:63475877-63475896 | Msa0463900:intron | 45.0% | |
| TAGTTTACTCATGGTCCGTC+GGG | - | chr3_3:63475952-63475971 | Msa0463900:intron | 45.0% | |
| !!! | CTTGTGATCGAAGGCGTTTT+TGG | - | chr3_3:63476520-63476539 | Msa0463900:intron | 45.0% |
| CAACTTCATGCTCCAAGAGT+AGG | + | chr3_3:63476781-63476800 | None:intergenic | 45.0% | |
| ! | TTTCGGGTCTGCACTTTATG+CGG | - | chr3_3:63476835-63476854 | Msa0463900:intron | 45.0% |
| ! | GGTATCTCTTTTGCGTGTCA+AGG | - | chr3_3:63477016-63477035 | Msa0463900:intron | 45.0% |
| AAGGATGGGAGCTTCTAGAT+TGG | - | chr3_3:63477052-63477071 | Msa0463900:intron | 45.0% | |
| CTATGACCCTGTCAGGAATT+TGG | - | chr3_3:63477158-63477177 | Msa0463900:intron | 45.0% | |
| !! | GCTGATTTGAGCTTATCCAC+TGG | + | chr3_3:63477421-63477440 | None:intergenic | 45.0% |
| AGAGTGAGGAACATAAGGGT+TGG | + | chr3_3:63478411-63478430 | None:intergenic | 45.0% | |
| ! | GGACTACTGATAAGGTGCTT+TGG | + | chr3_3:63478443-63478462 | None:intergenic | 45.0% |
| ATGCTCATAGGACAAGATGC+AGG | + | chr3_3:63478490-63478509 | None:intergenic | 45.0% | |
| CATTTGATATGCTAGGGTGC+GGG | + | chr3_3:63478682-63478701 | None:intergenic | 45.0% | |
| !! | GATATATAATATAAATTTAT+TGG | - | chr3_3:63475917-63475936 | Msa0463900:intron | 5.0% |
| GGGGACTATTCAAGGGTTAC+AGG | - | chr3_3:63472036-63472055 | Msa0463900:CDS | 50.0% | |
| !! | TCACTACGCTGGTGGATTCA+GGG | - | chr3_3:63472059-63472078 | Msa0463900:CDS | 50.0% |
| TTGAGAAACTCAGCCACACG+AGG | + | chr3_3:63472106-63472125 | None:intergenic | 50.0% | |
| AAAGGAGGGAAGGCCTCAAT+AGG | + | chr3_3:63472133-63472152 | None:intergenic | 50.0% | |
| TGTCACAGAGAAAGGAGGGA+AGG | + | chr3_3:63472143-63472162 | None:intergenic | 50.0% | |
| CCTACTGTCACAGAGAAAGG+AGG | + | chr3_3:63472148-63472167 | None:intergenic | 50.0% | |
| CCTCCTTTCTCTGTGACAGT+AGG | - | chr3_3:63472145-63472164 | Msa0463900:intron | 50.0% | |
| CATCAGCACCATGAATTGGC+AGG | + | chr3_3:63472258-63472277 | None:intergenic | 50.0% | |
| !! | GCCAATTCATGGTGCTGATG+TGG | - | chr3_3:63472258-63472277 | Msa0463900:intron | 50.0% |
| !!! | TGGTGCTGATGTGGTTTTGG+GGG | - | chr3_3:63472267-63472286 | Msa0463900:intron | 50.0% |
| !!! | ATGTGGTTTTGGGGGTCCAA+TGG | - | chr3_3:63472275-63472294 | Msa0463900:intron | 50.0% |
| TGGGCAAAAGAGGCTTGAGT+GGG | + | chr3_3:63472403-63472422 | None:intergenic | 50.0% | |
| TTGGGCAAAAGAGGCTTGAG+TGG | + | chr3_3:63472404-63472423 | None:intergenic | 50.0% | |
| GCGCACATTTACTGGAGAAG+AGG | + | chr3_3:63472650-63472669 | None:intergenic | 50.0% | |
| CGATATGGGCGCACATTTAC+TGG | + | chr3_3:63472658-63472677 | None:intergenic | 50.0% | |
| ! | TGGCACATGGAGATTTTGCG+TGG | - | chr3_3:63472798-63472817 | Msa0463900:intron | 50.0% |
| !! | ACTGCTTTTCGCACGGTAGA+TGG | - | chr3_3:63472979-63472998 | Msa0463900:intron | 50.0% |
| !! | CTGCTTTTCGCACGGTAGAT+GGG | - | chr3_3:63472980-63472999 | Msa0463900:intron | 50.0% |
| ! | AGATGGGCACTTTGAGTTCC+TGG | - | chr3_3:63472996-63473015 | Msa0463900:intron | 50.0% |
| ! | ATGTCAGTTTGGGGTACCTC+AGG | - | chr3_3:63473221-63473240 | Msa0463900:intron | 50.0% |
| TGCCCCAAATAATCCACCTG+AGG | + | chr3_3:63473240-63473259 | None:intergenic | 50.0% | |
| GGGGCATATCATATCAGCCA+AGG | - | chr3_3:63473254-63473273 | Msa0463900:intron | 50.0% | |
| AGGATCTACTGATACCCCCT+TGG | + | chr3_3:63473274-63473293 | None:intergenic | 50.0% | |
| !!! | GCTGTGAGGTTTTTAGGTGC+TGG | + | chr3_3:63473324-63473343 | None:intergenic | 50.0% |
| GAAAACCCCTAAGAGCTGTG+AGG | + | chr3_3:63473338-63473357 | None:intergenic | 50.0% | |
| !!! | AGGGGTTTTCTAGGACTCAC+TGG | - | chr3_3:63473348-63473367 | Msa0463900:intron | 50.0% |
| !!! | GGGGTTTTCTAGGACTCACT+GGG | - | chr3_3:63473349-63473368 | Msa0463900:intron | 50.0% |
| TGTGTCTGTACTCCAGCTGA+AGG | + | chr3_3:63473445-63473464 | None:intergenic | 50.0% | |
| GAGGTGACAACTGATGCTTC+GGG | - | chr3_3:63473543-63473562 | Msa0463900:intron | 50.0% | |
| GTTATGCCCACGAATGCAAG+CGG | - | chr3_3:63473626-63473645 | Msa0463900:intron | 50.0% | |
| GGATATAGCAGTGTACACCG+GGG | + | chr3_3:63473904-63473923 | None:intergenic | 50.0% | |
| AAGCAAGAGAGGTTGACAGG+TGG | + | chr3_3:63473925-63473944 | None:intergenic | 50.0% | |
| TGCAGCTGTGTAAGCAAGAG+AGG | + | chr3_3:63473936-63473955 | None:intergenic | 50.0% | |
| TCTCTTGCTTACACAGCTGC+AGG | - | chr3_3:63473935-63473954 | Msa0463900:intron | 50.0% | |
| TCCATTCTTCCACTGTTGGG+GGG | - | chr3_3:63474123-63474142 | Msa0463900:CDS | 50.0% | |
| ! | GTCTTGCAGCAGTTTTTGCC+TGG | - | chr3_3:63474174-63474193 | Msa0463900:intron | 50.0% |
| AGTGGTTGCAGAAGCCCATA+TGG | + | chr3_3:63474278-63474297 | None:intergenic | 50.0% | |
| ATGTCCTCCCAGACATGTTG+TGG | + | chr3_3:63474308-63474327 | None:intergenic | 50.0% | |
| CAGATGCGTTACGAAGTCCA+TGG | + | chr3_3:63474333-63474352 | None:intergenic | 50.0% | |
| !!! | GCTGTTTTTCCGTTGGATGG+AGG | + | chr3_3:63474356-63474375 | None:intergenic | 50.0% |
| TAGACTTCGGTGAGGAACAG+GGG | + | chr3_3:63474461-63474480 | None:intergenic | 50.0% | |
| GATAGACTTCGGTGAGGAAC+AGG | + | chr3_3:63474463-63474482 | None:intergenic | 50.0% | |
| ACCGAAGTCTATCGCCTTCA+CGG | - | chr3_3:63474470-63474489 | Msa0463900:intron | 50.0% | |
| TCCGTGAAGGCGATAGACTT+CGG | + | chr3_3:63474474-63474493 | None:intergenic | 50.0% | |
| ! | TCCAGAGTCTGATGGGCAAA+CGG | - | chr3_3:63474601-63474620 | Msa0463900:intron | 50.0% |
| GAGACATACGGATGGCAGAT+TGG | + | chr3_3:63474736-63474755 | None:intergenic | 50.0% | |
| CTGGAATGGAGACATACGGA+TGG | + | chr3_3:63474744-63474763 | None:intergenic | 50.0% | |
| CATCCGTATGTCTCCATTCC+AGG | - | chr3_3:63474742-63474761 | Msa0463900:intron | 50.0% | |
| CAGCCTGGAATGGAGACATA+CGG | + | chr3_3:63474748-63474767 | None:intergenic | 50.0% | |
| CGACCATAAACAGCCTGGAA+TGG | + | chr3_3:63474758-63474777 | None:intergenic | 50.0% | |
| ATCAGCTCAGATTGCAACGG+TGG | - | chr3_3:63474811-63474830 | Msa0463900:CDS | 50.0% | |
| TCAGATTGCAACGGTGGATG+AGG | - | chr3_3:63474817-63474836 | Msa0463900:CDS | 50.0% | |
| GCAACTTTCGAGGCTACTGA+AGG | - | chr3_3:63474856-63474875 | Msa0463900:CDS | 50.0% | |
| ! | CTAGACCGTCAGTTTCAGGT+GGG | - | chr3_3:63474932-63474951 | Msa0463900:intron | 50.0% |
| ! | GTCAGTTTCAGGTGGGAGAT+TGG | - | chr3_3:63474939-63474958 | Msa0463900:intron | 50.0% |
| AACTTCCTGCTAAGCTTGGG+CGG | + | chr3_3:63475016-63475035 | None:intergenic | 50.0% | |
| ATGCGTCGGAGAACACAGAA+AGG | + | chr3_3:63475046-63475065 | None:intergenic | 50.0% | |
| TTCTGTGTTCTCCGACGCAT+CGG | - | chr3_3:63475046-63475065 | Msa0463900:intron | 50.0% | |
| TGAGCTCAAGTTAAACCCGG+AGG | - | chr3_3:63475081-63475100 | Msa0463900:intron | 50.0% | |
| TCAAGTTAAACCCGGAGGCA+CGG | - | chr3_3:63475086-63475105 | Msa0463900:intron | 50.0% | |
| ! | GTTGTGCTAGTAACGGAGCT+GGG | + | chr3_3:63475184-63475203 | None:intergenic | 50.0% |
| ! | AGTTGTGCTAGTAACGGAGC+TGG | + | chr3_3:63475185-63475204 | None:intergenic | 50.0% |
| CCAAGATCTGATCTGGATCC+AGG | + | chr3_3:63475213-63475232 | None:intergenic | 50.0% | |
| CCTGGATCCAGATCAGATCT+TGG | - | chr3_3:63475210-63475229 | Msa0463900:intron | 50.0% | |
| CGAGATCCCAAGATCTGATC+TGG | + | chr3_3:63475220-63475239 | None:intergenic | 50.0% | |
| ! | CAACAGCTGTTGAAGTGTCC+CGG | + | chr3_3:63475260-63475279 | None:intergenic | 50.0% |
| CAGCTGTTGGTCAAGTGGAA+AGG | - | chr3_3:63475271-63475290 | Msa0463900:intron | 50.0% | |
| TGGCAGAAGAAGAAGCGACT+TGG | - | chr3_3:63475296-63475315 | Msa0463900:intron | 50.0% | |
| GGCAGAAGAAGAAGCGACTT+GGG | - | chr3_3:63475297-63475316 | Msa0463900:intron | 50.0% | |
| TGAGTGAATTTCGTCGCACG+TGG | - | chr3_3:63475326-63475345 | Msa0463900:intron | 50.0% | |
| GAATCAGTTGCAAAAGGGCC+GGG | - | chr3_3:63475430-63475449 | Msa0463900:intron | 50.0% | |
| ! | ACTTCTTGAGGGTTCTGACC+CGG | + | chr3_3:63475451-63475470 | None:intergenic | 50.0% |
| GGTCAGAACCCTCAAGAAGT+GGG | - | chr3_3:63475451-63475470 | Msa0463900:intron | 50.0% | |
| !!! | ACATTTTTGGTGGAGGTGCG+AGG | - | chr3_3:63475789-63475808 | Msa0463900:intron | 50.0% |
| !! | GGTTGATGATCCATACCCGA+CGG | + | chr3_3:63475970-63475989 | None:intergenic | 50.0% |
| AACGCCTTCGATCACAAGTG+TGG | + | chr3_3:63476518-63476537 | None:intergenic | 50.0% | |
| GTCCGACATGTGTCAATGTC+CGG | - | chr3_3:63476544-63476563 | Msa0463900:intron | 50.0% | |
| TGCCGGACATTGACACATGT+CGG | + | chr3_3:63476549-63476568 | None:intergenic | 50.0% | |
| !! | ATGTAATGGCACCGATGTGC+CGG | + | chr3_3:63476578-63476597 | None:intergenic | 50.0% |
| TGTCAGTGACGTGTCTGTGT+CGG | - | chr3_3:63476630-63476649 | Msa0463900:intron | 50.0% | |
| ACCAGATGAGCACCTACTCT+TGG | - | chr3_3:63476766-63476785 | Msa0463900:intron | 50.0% | |
| TCCAAGAGTAGGTGCTCATC+TGG | + | chr3_3:63476770-63476789 | None:intergenic | 50.0% | |
| TTCGGGTCTGCACTTTATGC+GGG | - | chr3_3:63476836-63476855 | Msa0463900:intron | 50.0% | |
| ! | TTGGCCCGTTTTGCGAAAGA+TGG | - | chr3_3:63477071-63477090 | Msa0463900:intron | 50.0% |
| CTCACTAGTGCTTATGCCAG+TGG | - | chr3_3:63477402-63477421 | Msa0463900:intron | 50.0% | |
| !! | ATAAGGGGTTGTGGCCTTGT+GGG | + | chr3_3:63478384-63478403 | None:intergenic | 50.0% |
| GTTGGAGAGATAAGGGGTTG+TGG | + | chr3_3:63478393-63478412 | None:intergenic | 50.0% | |
| TTGCATCCTTGCATCGTGCT+GGG | - | chr3_3:63478801-63478820 | Msa0463900:CDS | 50.0% | |
| CTGGGGCCGTTTCAGTTATT+AGG | - | chr3_3:63478819-63478838 | Msa0463900:CDS | 50.0% | |
| ATCCTCGAGTGAACTTGGAG+CGG | + | chr3_3:63478846-63478865 | None:intergenic | 50.0% | |
| TCTGCATCCTCGAGTGAACT+TGG | + | chr3_3:63478851-63478870 | None:intergenic | 50.0% | |
| !! | GCGCTCTGGGGACTATTCAA+GGG | - | chr3_3:63472029-63472048 | Msa0463900:CDS | 55.0% |
| AGGGTTACAGGTCACTACGC+TGG | - | chr3_3:63472048-63472067 | Msa0463900:CDS | 55.0% | |
| GTTACAGGTCACTACGCTGG+TGG | - | chr3_3:63472051-63472070 | Msa0463900:CDS | 55.0% | |
| !! | GTCACTACGCTGGTGGATTC+AGG | - | chr3_3:63472058-63472077 | Msa0463900:CDS | 55.0% |
| GGGCAAAAGAGGCTTGAGTG+GGG | + | chr3_3:63472402-63472421 | None:intergenic | 55.0% | |
| TGATCTTTAGACCGGTGGGG+AGG | + | chr3_3:63472607-63472626 | None:intergenic | 55.0% | |
| ! | TTTGGTGATACCCTGCCCGT+AGG | + | chr3_3:63472930-63472949 | None:intergenic | 55.0% |
| GAGTTCCTGGTCATGCCCTT+TGG | - | chr3_3:63473009-63473028 | Msa0463900:intron | 55.0% | |
| GCATATCCTGCATCTCCAGC+AGG | - | chr3_3:63473152-63473171 | Msa0463900:intron | 55.0% | |
| TTAGTGTGTCCAGGACCTGC+TGG | + | chr3_3:63473170-63473189 | None:intergenic | 55.0% | |
| ! | TCAGTTTGGGGTACCTCAGG+TGG | - | chr3_3:63473224-63473243 | Msa0463900:intron | 55.0% |
| ! | GGCGCTCCCTAATTTTCTGC+AGG | - | chr3_3:63473515-63473534 | Msa0463900:intron | 55.0% |
| AAGTGGCGCCAATACCTGCT+AGG | - | chr3_3:63473696-63473715 | Msa0463900:intron | 55.0% | |
| CGCGAAAATGACGACCTAGC+AGG | + | chr3_3:63473713-63473732 | None:intergenic | 55.0% | |
| GTACACCGGGGAATCATCAG+AGG | + | chr3_3:63473892-63473911 | None:intergenic | 55.0% | |
| TGTCTGGGAGGACATCTCCA+TGG | - | chr3_3:63474313-63474332 | Msa0463900:intron | 55.0% | |
| ACGCATCTGCCTCCATCCAA+CGG | - | chr3_3:63474344-63474363 | Msa0463900:intron | 55.0% | |
| GAAGGCGATAGACTTCGGTG+AGG | + | chr3_3:63474469-63474488 | None:intergenic | 55.0% | |
| TCCGTTTGCCCATCAGACTC+TGG | + | chr3_3:63474605-63474624 | None:intergenic | 55.0% | |
| ! | AGAGTCTGATGGGCAAACGG+AGG | - | chr3_3:63474604-63474623 | Msa0463900:intron | 55.0% |
| CGTCGCAAGCAAAACATCGC+AGG | + | chr3_3:63474655-63474674 | None:intergenic | 55.0% | |
| GAGCACGACCATAAACAGCC+TGG | + | chr3_3:63474763-63474782 | None:intergenic | 55.0% | |
| ! | CGGTGGATGAGGCTTTGACT+CGG | - | chr3_3:63474828-63474847 | Msa0463900:CDS | 55.0% |
| CTCGGCGAATGCAACTTTCG+AGG | - | chr3_3:63474846-63474865 | Msa0463900:CDS | 55.0% | |
| CAGGCTAGACCGTCAGTTTC+AGG | - | chr3_3:63474928-63474947 | Msa0463900:intron | 55.0% | |
| GCTAGACCGTCAGTTTCAGG+TGG | - | chr3_3:63474931-63474950 | Msa0463900:intron | 55.0% | |
| AAGCGACAGATCCGATGCGT+CGG | + | chr3_3:63475060-63475079 | None:intergenic | 55.0% | |
| CGGGACACTTCAACAGCTGT+TGG | - | chr3_3:63475258-63475277 | Msa0463900:intron | 55.0% | |
| ATTTCGTCGCACGTGGCCTT+TGG | - | chr3_3:63475333-63475352 | Msa0463900:intron | 55.0% | |
| GGGTCAGAACCCTCAAGAAG+TGG | - | chr3_3:63475450-63475469 | Msa0463900:intron | 55.0% | |
| TACTCATGGTCCGTCGGGTA+TGG | - | chr3_3:63475957-63475976 | Msa0463900:intron | 55.0% | |
| !! | TCAATGTCCGGCATCGACAC+CGG | - | chr3_3:63476556-63476575 | Msa0463900:intron | 55.0% |
| CGGCAAAAGATGACCGTACG+CGG | - | chr3_3:63478027-63478046 | Msa0463900:intron | 55.0% | |
| AGATGACCGTACGCGGAAAG+CGG | - | chr3_3:63478034-63478053 | Msa0463900:intron | 55.0% | |
| CTGGCTAAGCTGTCACACTC+AGG | - | chr3_3:63478068-63478087 | Msa0463900:intron | 55.0% | |
| TAGCGGGAGTTCAACCCACA+AGG | - | chr3_3:63478367-63478386 | Msa0463900:CDS | 55.0% | |
| ! | GATAAGGGGTTGTGGCCTTG+TGG | + | chr3_3:63478385-63478404 | None:intergenic | 55.0% |
| CTTGCATCCTTGCATCGTGC+TGG | - | chr3_3:63478800-63478819 | Msa0463900:CDS | 55.0% | |
| TGCATCCTTGCATCGTGCTG+GGG | - | chr3_3:63478802-63478821 | Msa0463900:CDS | 55.0% | |
| AATAGTCCCCAGAGCGCGCA+AGG | + | chr3_3:63472026-63472045 | None:intergenic | 60.0% | |
| !! | CGCGCTCTGGGGACTATTCA+AGG | - | chr3_3:63472028-63472047 | Msa0463900:CDS | 60.0% |
| CGGTGGGGAGGAAGTCCTTT+GGG | + | chr3_3:63472595-63472614 | None:intergenic | 60.0% | |
| CCAAAGGACTTCCTCCCCAC+CGG | - | chr3_3:63472593-63472612 | Msa0463900:intron | 60.0% | |
| GGCCGTCTCTGAGCATGTCT+TGG | + | chr3_3:63472720-63472739 | None:intergenic | 60.0% | |
| TCTAAGCTGGACCTACGGGC+AGG | - | chr3_3:63472916-63472935 | Msa0463900:CDS | 60.0% | |
| CTAAGCTGGACCTACGGGCA+GGG | - | chr3_3:63472917-63472936 | Msa0463900:CDS | 60.0% | |
| ! | GATGCTTCGGGCACTGCCAT+TGG | - | chr3_3:63473555-63473574 | Msa0463900:intron | 60.0% |
| GGCAAGAGGTTGGGCTCCTT+GGG | + | chr3_3:63473592-63473611 | None:intergenic | 60.0% | |
| AGGCAAGAGGTTGGGCTCCT+TGG | + | chr3_3:63473593-63473612 | None:intergenic | 60.0% | |
| CAGACGCCGCTTGCATTCGT+GGG | + | chr3_3:63473635-63473654 | None:intergenic | 60.0% | |
| GCCCCCCAACAGTGGAAGAA+TGG | + | chr3_3:63474127-63474146 | None:intergenic | 60.0% | |
| !! | TCCACTGTTGGGGGGCATTC+TGG | - | chr3_3:63474131-63474150 | Msa0463900:CDS | 60.0% |
| !! | CCACTGTTGGGGGGCATTCT+GGG | - | chr3_3:63474132-63474151 | Msa0463900:CDS | 60.0% |
| !! | GGGGGGCATTCTGGGATACA+AGG | - | chr3_3:63474140-63474159 | Msa0463900:CDS | 60.0% |
| CTTGCGACGCGCCAAATCGA+TGG | - | chr3_3:63474666-63474685 | Msa0463900:intron | 60.0% | |
| ! | CGGTGCATGCCCTTTTACGG+TGG | + | chr3_3:63474996-63475015 | None:intergenic | 60.0% |
| ! | GGGCGGTGCATGCCCTTTTA+CGG | + | chr3_3:63474999-63475018 | None:intergenic | 60.0% |
| ATGCACCGCCCAAGCTTAGC+AGG | - | chr3_3:63475008-63475027 | Msa0463900:intron | 60.0% | |
| ACAGGATGGATCCGTGCCTC+CGG | + | chr3_3:63475100-63475119 | None:intergenic | 60.0% | |
| GCAGGCGGCTCACCATGAAA+AGG | + | chr3_3:63475145-63475164 | None:intergenic | 60.0% | |
| ! | AACGGAGCTGGGAAGTGCGA+CGG | + | chr3_3:63475173-63475192 | None:intergenic | 60.0% |
| ! | CTGTTGAAGTGTCCCGGTCG+CGG | + | chr3_3:63475254-63475273 | None:intergenic | 60.0% |
| TGCTGCGGCCCACTTCTTGA+GGG | + | chr3_3:63475462-63475481 | None:intergenic | 60.0% | |
| TTGCTGCGGCCCACTTCTTG+AGG | + | chr3_3:63475463-63475482 | None:intergenic | 60.0% | |
| AACGGCGCGCATTGTGCGAA+AGG | + | chr3_3:63476105-63476124 | None:intergenic | 60.0% | |
| ! | GAAAGCGGCGCTGAATGCTC+TGG | - | chr3_3:63478049-63478068 | Msa0463900:intron | 60.0% |
| GTCCGCTCCAAGTTCACTCG+AGG | - | chr3_3:63478841-63478860 | Msa0463900:CDS | 60.0% | |
| GCGCGCAAGGTACGTGGTGA+TGG | + | chr3_3:63472013-63472032 | None:intergenic | 65.0% | |
| ACCACGTACCTTGCGCGCTC+TGG | - | chr3_3:63472015-63472034 | Msa0463900:CDS | 65.0% | |
| CCACGTACCTTGCGCGCTCT+GGG | - | chr3_3:63472016-63472035 | Msa0463900:CDS | 65.0% | |
| CACGTACCTTGCGCGCTCTG+GGG | - | chr3_3:63472017-63472036 | Msa0463900:CDS | 65.0% | |
| GAGGCTTGAGTGGGGTGAGC+TGG | + | chr3_3:63472394-63472413 | None:intergenic | 65.0% | |
| CCGGTGGGGAGGAAGTCCTT+TGG | + | chr3_3:63472596-63472615 | None:intergenic | 65.0% | |
| CCAGGACCTGCTGGAGATGC+AGG | + | chr3_3:63473161-63473180 | None:intergenic | 65.0% | |
| CCTGCATCTCCAGCAGGTCC+TGG | - | chr3_3:63473158-63473177 | Msa0463900:intron | 65.0% | |
| GCAGACGCCGCTTGCATTCG+TGG | + | chr3_3:63473636-63473655 | None:intergenic | 65.0% | |
| CCCAGAATGCCCCCCAACAG+TGG | + | chr3_3:63474135-63474154 | None:intergenic | 65.0% | |
| CAGGATGGATCCGTGCCTCC+GGG | + | chr3_3:63475099-63475118 | None:intergenic | 65.0% | |
| ! | AGTGCGACGGGTTCAGCAGG+CGG | + | chr3_3:63475160-63475179 | None:intergenic | 65.0% |
| ! | GGAAGTGCGACGGGTTCAGC+AGG | + | chr3_3:63475163-63475182 | None:intergenic | 65.0% |
| ! | ACGGAGCTGGGAAGTGCGAC+GGG | + | chr3_3:63475172-63475191 | None:intergenic | 65.0% |
| CGTACGCTGCTTACCGCGAC+CGG | - | chr3_3:63475238-63475257 | Msa0463900:intron | 65.0% | |
| GTACGCTGCTTACCGCGACC+GGG | - | chr3_3:63475239-63475258 | Msa0463900:intron | 65.0% | |
| GGCGCGCATTGTGCGAAAGG+TGG | + | chr3_3:63476102-63476121 | None:intergenic | 65.0% | |
| !! | CGATGTGCCGGTGTCGATGC+CGG | + | chr3_3:63476566-63476585 | None:intergenic | 65.0% |
| !! | CGGCATCGACACCGGCACAT+CGG | - | chr3_3:63476564-63476583 | Msa0463900:intron | 65.0% |
| ! | TCAGCGCCGCTTTCCGCGTA+CGG | + | chr3_3:63478043-63478062 | None:intergenic | 65.0% |
| AACGGCCCCAGCACGATGCA+AGG | + | chr3_3:63478810-63478829 | None:intergenic | 65.0% | |
| CCCAGAGCGCGCAAGGTACG+TGG | + | chr3_3:63472019-63472038 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 63471998 | 63478934 | 63471998 | ID=Msa0463900;Name=Msa0463900 |
| chr3_3 | mRNA | 63471998 | 63478934 | 63471998 | ID=Msa0463900-mRNA-1;Parent=Msa0463900;Name=Msa0463900-mRNA-1;_AED=0.52;_eAED=0.52;_QI=0|0.57|0.5|0.75|0.28|0.37|8|0|345 |
| chr3_3 | exon | 63478706 | 63478934 | 63478706 | ID=Msa0463900-mRNA-1:exon:13902;Parent=Msa0463900-mRNA-1 |
| chr3_3 | exon | 63478275 | 63478486 | 63478275 | ID=Msa0463900-mRNA-1:exon:13901;Parent=Msa0463900-mRNA-1 |
| chr3_3 | exon | 63474790 | 63474879 | 63474790 | ID=Msa0463900-mRNA-1:exon:13900;Parent=Msa0463900-mRNA-1 |
| chr3_3 | exon | 63474616 | 63474682 | 63474616 | ID=Msa0463900-mRNA-1:exon:13899;Parent=Msa0463900-mRNA-1 |
| chr3_3 | exon | 63474051 | 63474161 | 63474051 | ID=Msa0463900-mRNA-1:exon:13898;Parent=Msa0463900-mRNA-1 |
| chr3_3 | exon | 63473840 | 63473938 | 63473840 | ID=Msa0463900-mRNA-1:exon:13897;Parent=Msa0463900-mRNA-1 |
| chr3_3 | exon | 63472843 | 63472968 | 63472843 | ID=Msa0463900-mRNA-1:exon:13896;Parent=Msa0463900-mRNA-1 |
| chr3_3 | exon | 63471998 | 63472098 | 63471998 | ID=Msa0463900-mRNA-1:exon:13895;Parent=Msa0463900-mRNA-1 |
| chr3_3 | CDS | 63478706 | 63478934 | 63478706 | ID=Msa0463900-mRNA-1:cds;Parent=Msa0463900-mRNA-1 |
| chr3_3 | CDS | 63478275 | 63478486 | 63478275 | ID=Msa0463900-mRNA-1:cds;Parent=Msa0463900-mRNA-1 |
| chr3_3 | CDS | 63474790 | 63474879 | 63474790 | ID=Msa0463900-mRNA-1:cds;Parent=Msa0463900-mRNA-1 |
| chr3_3 | CDS | 63474616 | 63474682 | 63474616 | ID=Msa0463900-mRNA-1:cds;Parent=Msa0463900-mRNA-1 |
| chr3_3 | CDS | 63474051 | 63474161 | 63474051 | ID=Msa0463900-mRNA-1:cds;Parent=Msa0463900-mRNA-1 |
| chr3_3 | CDS | 63473840 | 63473938 | 63473840 | ID=Msa0463900-mRNA-1:cds;Parent=Msa0463900-mRNA-1 |
| chr3_3 | CDS | 63472843 | 63472968 | 63472843 | ID=Msa0463900-mRNA-1:cds;Parent=Msa0463900-mRNA-1 |
| chr3_3 | CDS | 63471998 | 63472098 | 63471998 | ID=Msa0463900-mRNA-1:cds;Parent=Msa0463900-mRNA-1 |
| Gene Sequence |
| Protein sequence |
