Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0304300 | XP_003597842.2 | 96.218 | 238 | 9 | 0 | 1 | 238 | 1 | 238 | 3.04e-169 | 476 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0304300 | sp|Q8VZT8|RT11_ARATH | 54.237 | 177 | 76 | 2 | 63 | 238 | 142 | 314 | 3.80e-63 | 202 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0304300 | G7IMH8 | 96.218 | 238 | 9 | 0 | 1 | 238 | 1 | 238 | 1.45e-169 | 476 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002490 | Msa0304300 | 0.818050 | 2.399086e-52 | -8.615850e-47 |
| Msa0002540 | Msa0304300 | 0.811864 | 5.657258e-51 | -8.615850e-47 |
| Msa0004980 | Msa0304300 | 0.805582 | 1.245346e-49 | -8.615850e-47 |
| Msa0016670 | Msa0304300 | 0.836106 | 1.136147e-56 | -8.615850e-47 |
| Msa0027260 | Msa0304300 | 0.818007 | 2.453444e-52 | -8.615850e-47 |
| Msa0029710 | Msa0304300 | 0.819175 | 1.333399e-52 | -8.615850e-47 |
| Msa0032260 | Msa0304300 | 0.835013 | 2.147825e-56 | -8.615850e-47 |
| Msa0032840 | Msa0304300 | -0.812026 | 5.214496e-51 | -8.615850e-47 |
| Msa0041620 | Msa0304300 | 0.805744 | 1.151683e-49 | -8.615850e-47 |
| Msa0047980 | Msa0304300 | 0.817262 | 3.613265e-52 | -8.615850e-47 |
| Msa0051170 | Msa0304300 | 0.808845 | 2.534845e-50 | -8.615850e-47 |
| Msa0051270 | Msa0304300 | 0.808152 | 3.564363e-50 | -8.615850e-47 |
| Msa0073670 | Msa0304300 | 0.823067 | 1.691157e-53 | -8.615850e-47 |
| Msa0074320 | Msa0304300 | 0.838059 | 3.599890e-57 | -8.615850e-47 |
| Msa0076000 | Msa0304300 | 0.808488 | 3.021181e-50 | -8.615850e-47 |
| Msa0077200 | Msa0304300 | 0.823934 | 1.059964e-53 | -8.615850e-47 |
| Msa0082280 | Msa0304300 | 0.814755 | 1.310575e-51 | -8.615850e-47 |
| Msa0090590 | Msa0304300 | 0.801675 | 8.049167e-49 | -8.615850e-47 |
| Msa0092740 | Msa0304300 | -0.802453 | 5.570521e-49 | -8.615850e-47 |
| Msa0094920 | Msa0304300 | 0.825743 | 3.969202e-54 | -8.615850e-47 |
| Msa0094950 | Msa0304300 | 0.973270 | 3.811247e-136 | -8.615850e-47 |
| Msa0095380 | Msa0304300 | 0.839984 | 1.142726e-57 | -8.615850e-47 |
| Msa0121590 | Msa0304300 | 0.807666 | 4.522136e-50 | -8.615850e-47 |
| Msa0124340 | Msa0304300 | 0.815170 | 1.060269e-51 | -8.615850e-47 |
| Msa0124990 | Msa0304300 | 0.825490 | 4.557321e-54 | -8.615850e-47 |
| Msa0127310 | Msa0304300 | 0.822912 | 1.837789e-53 | -8.615850e-47 |
| Msa0128860 | Msa0304300 | 0.804628 | 1.971552e-49 | -8.615850e-47 |
| Msa0137610 | Msa0304300 | -0.819357 | 1.211616e-52 | -8.615850e-47 |
| Msa0143080 | Msa0304300 | 0.806620 | 7.529428e-50 | -8.615850e-47 |
| Msa0167480 | Msa0304300 | 0.806210 | 9.188677e-50 | -8.615850e-47 |
| Msa0173820 | Msa0304300 | 0.802121 | 6.518997e-49 | -8.615850e-47 |
| Msa0174730 | Msa0304300 | 0.805278 | 1.442101e-49 | -8.615850e-47 |
| Msa0174770 | Msa0304300 | 0.822244 | 2.627633e-53 | -8.615850e-47 |
| Msa0183830 | Msa0304300 | 0.804562 | 2.035181e-49 | -8.615850e-47 |
| Msa0186890 | Msa0304300 | 0.841899 | 3.590384e-58 | -8.615850e-47 |
| Msa0187690 | Msa0304300 | 0.828017 | 1.135683e-54 | -8.615850e-47 |
| Msa0187930 | Msa0304300 | 0.828731 | 7.638038e-55 | -8.615850e-47 |
| Msa0194480 | Msa0304300 | 0.807613 | 4.640520e-50 | -8.615850e-47 |
| Msa0194540 | Msa0304300 | 0.842109 | 3.160438e-58 | -8.615850e-47 |
| Msa0194970 | Msa0304300 | 0.810589 | 1.069253e-50 | -8.615850e-47 |
| Msa0197890 | Msa0304300 | 0.809363 | 1.963525e-50 | -8.615850e-47 |
| Msa0199690 | Msa0304300 | 0.825683 | 4.100445e-54 | -8.615850e-47 |
| Msa0222920 | Msa0304300 | 0.813094 | 3.045704e-51 | -8.615850e-47 |
| Msa0227400 | Msa0304300 | 0.818706 | 1.703734e-52 | -8.615850e-47 |
| Msa0230550 | Msa0304300 | -0.814928 | 1.200086e-51 | -8.615850e-47 |
| Msa0231880 | Msa0304300 | 0.820215 | 7.715797e-53 | -8.615850e-47 |
| Msa0236270 | Msa0304300 | 0.821214 | 4.548240e-53 | -8.615850e-47 |
| Msa0236980 | Msa0304300 | 0.803092 | 4.110428e-49 | -8.615850e-47 |
| Msa0241780 | Msa0304300 | 0.805044 | 1.614468e-49 | -8.615850e-47 |
| Msa0241800 | Msa0304300 | 0.836655 | 8.240744e-57 | -8.615850e-47 |
| Msa0242230 | Msa0304300 | 0.842730 | 2.163746e-58 | -8.615850e-47 |
| Msa0242680 | Msa0304300 | 0.811296 | 7.517561e-51 | -8.615850e-47 |
| Msa0244780 | Msa0304300 | 0.822500 | 2.291997e-53 | -8.615850e-47 |
| Msa0260210 | Msa0304300 | 0.817333 | 3.481334e-52 | -8.615850e-47 |
| Msa0260240 | Msa0304300 | 0.972869 | 1.785401e-135 | -8.615850e-47 |
| Msa0260280 | Msa0304300 | 0.974015 | 2.039484e-137 | -8.615850e-47 |
| Msa0260830 | Msa0304300 | 0.800767 | 1.235217e-48 | -8.615850e-47 |
| Msa0262310 | Msa0304300 | 0.822643 | 2.122508e-53 | -8.615850e-47 |
| Msa0264570 | Msa0304300 | 0.828947 | 6.772277e-55 | -8.615850e-47 |
| Msa0268130 | Msa0304300 | 0.832842 | 7.502860e-56 | -8.615850e-47 |
| Msa0280430 | Msa0304300 | 0.819153 | 1.348446e-52 | -8.615850e-47 |
| Msa0291520 | Msa0304300 | 0.817420 | 3.327983e-52 | -8.615850e-47 |
| Msa0294390 | Msa0304300 | 0.806528 | 7.872949e-50 | -8.615850e-47 |
| Msa0298990 | Msa0304300 | 0.823668 | 1.223398e-53 | -8.615850e-47 |
| Msa0304260 | Msa0304300 | 0.990803 | 2.103339e-184 | -8.615850e-47 |
| Msa0304290 | Msa0304300 | 0.826281 | 2.957362e-54 | -8.615850e-47 |
| Msa0304300 | Msa0304330 | 0.827396 | 1.600738e-54 | -8.615850e-47 |
| Msa0304300 | Msa0304590 | 0.820501 | 6.634686e-53 | -8.615850e-47 |
| Msa0304300 | Msa0304660 | 0.806945 | 6.427212e-50 | -8.615850e-47 |
| Msa0304300 | Msa0304920 | 0.826898 | 2.107206e-54 | -8.615850e-47 |
| Msa0304300 | Msa0305890 | 0.810944 | 8.958805e-51 | -8.615850e-47 |
| Msa0304300 | Msa0310410 | 0.802125 | 6.505967e-49 | -8.615850e-47 |
| Msa0304300 | Msa0317250 | 0.803373 | 3.596013e-49 | -8.615850e-47 |
| Msa0304300 | Msa0328210 | 0.805925 | 1.054935e-49 | -8.615850e-47 |
| Msa0304300 | Msa0331700 | 0.805971 | 1.031841e-49 | -8.615850e-47 |
| Msa0304300 | Msa0337650 | 0.825319 | 5.001941e-54 | -8.615850e-47 |
| Msa0304300 | Msa0340810 | 0.808887 | 2.482683e-50 | -8.615850e-47 |
| Msa0304300 | Msa0355270 | 0.816157 | 6.390788e-52 | -8.615850e-47 |
| Msa0304300 | Msa0360990 | 0.809626 | 1.723904e-50 | -8.615850e-47 |
| Msa0304300 | Msa0369570 | 0.801739 | 7.811816e-49 | -8.615850e-47 |
| Msa0304300 | Msa0376040 | 0.804968 | 1.674297e-49 | -8.615850e-47 |
| Msa0304300 | Msa0376690 | 0.835062 | 2.088504e-56 | -8.615850e-47 |
| Msa0304300 | Msa0392940 | 0.829153 | 6.035039e-55 | -8.615850e-47 |
| Msa0304300 | Msa0394400 | 0.800487 | 1.408336e-48 | -8.615850e-47 |
| Msa0304300 | Msa0398950 | 0.800311 | 1.529950e-48 | -8.615850e-47 |
| Msa0304300 | Msa0402330 | 0.811721 | 6.075493e-51 | -8.615850e-47 |
| Msa0304300 | Msa0413450 | 0.839350 | 1.669938e-57 | -8.615850e-47 |
| Msa0304300 | Msa0416400 | 0.827783 | 1.292711e-54 | -8.615850e-47 |
| Msa0304300 | Msa0425940 | 0.804488 | 2.108730e-49 | -8.615850e-47 |
| Msa0304300 | Msa0437690 | -0.818594 | 1.806726e-52 | -8.615850e-47 |
| Msa0304300 | Msa0458060 | 0.815093 | 1.103063e-51 | -8.615850e-47 |
| Msa0304300 | Msa0463500 | 0.803808 | 2.921484e-49 | -8.615850e-47 |
| Msa0304300 | Msa0463900 | 0.800797 | 1.217641e-48 | -8.615850e-47 |
| Msa0304300 | Msa0469910 | -0.808319 | 3.282708e-50 | -8.615850e-47 |
| Msa0304300 | Msa0471590 | 0.846695 | 1.847798e-59 | -8.615850e-47 |
| Msa0304300 | Msa0472380 | 0.814321 | 1.635339e-51 | -8.615850e-47 |
| Msa0304300 | Msa0485990 | 0.805085 | 1.582919e-49 | -8.615850e-47 |
| Msa0304300 | Msa0497030 | 0.825920 | 3.602727e-54 | -8.615850e-47 |
| Msa0304300 | Msa0505150 | 0.815229 | 1.029043e-51 | -8.615850e-47 |
| Msa0304300 | Msa0508590 | 0.828807 | 7.321079e-55 | -8.615850e-47 |
| Msa0304300 | Msa0508630 | 0.830592 | 2.693125e-55 | -8.615850e-47 |
| Msa0304300 | Msa0509950 | -0.813139 | 2.976738e-51 | -8.615850e-47 |
| Msa0304300 | Msa0516040 | 0.802233 | 6.184234e-49 | -8.615850e-47 |
| Msa0304300 | Msa0525340 | 0.810221 | 1.283703e-50 | -8.615850e-47 |
| Msa0304300 | Msa0526540 | 0.823486 | 1.349871e-53 | -8.615850e-47 |
| Msa0304300 | Msa0535030 | 0.800575 | 1.351158e-48 | -8.615850e-47 |
| Msa0304300 | Msa0541860 | 0.841844 | 3.714604e-58 | -8.615850e-47 |
| Msa0304300 | Msa0552810 | 0.840676 | 7.534177e-58 | -8.615850e-47 |
| Msa0304300 | Msa0560470 | 0.830704 | 2.528182e-55 | -8.615850e-47 |
| Msa0304300 | Msa0568820 | 0.802300 | 5.990802e-49 | -8.615850e-47 |
| Msa0304300 | Msa0576690 | 0.816037 | 6.796436e-52 | -8.615850e-47 |
| Msa0304300 | Msa0576940 | 0.823820 | 1.127612e-53 | -8.615850e-47 |
| Msa0304300 | Msa0580710 | 0.801124 | 1.044036e-48 | -8.615850e-47 |
| Msa0304300 | Msa0581070 | 0.827282 | 1.705009e-54 | -8.615850e-47 |
| Msa0304300 | Msa0585900 | 0.817738 | 2.822535e-52 | -8.615850e-47 |
| Msa0304300 | Msa0590680 | 0.803008 | 4.279838e-49 | -8.615850e-47 |
| Msa0304300 | Msa0591060 | 0.841350 | 5.012336e-58 | -8.615850e-47 |
| Msa0304300 | Msa0591770 | 0.819848 | 9.361967e-53 | -8.615850e-47 |
| Msa0304300 | Msa0607200 | 0.807210 | 5.649017e-50 | -8.615850e-47 |
| Msa0304300 | Msa0610390 | 0.818034 | 2.419832e-52 | -8.615850e-47 |
| Msa0304300 | Msa0616020 | 0.813832 | 2.096285e-51 | -8.615850e-47 |
| Msa0304300 | Msa0618040 | 0.814131 | 1.801321e-51 | -8.615850e-47 |
| Msa0304300 | Msa0619070 | 0.811106 | 8.264679e-51 | -8.615850e-47 |
| Msa0304300 | Msa0619510 | 0.811527 | 6.697554e-51 | -8.615850e-47 |
| Msa0304300 | Msa0620990 | 0.805817 | 1.111486e-49 | -8.615850e-47 |
| Msa0304300 | Msa0623700 | 0.806712 | 7.198944e-50 | -8.615850e-47 |
| Msa0304300 | Msa0625070 | 0.805638 | 1.212246e-49 | -8.615850e-47 |
| Msa0304300 | Msa0639120 | 0.830703 | 2.529979e-55 | -8.615850e-47 |
| Msa0304300 | Msa0647380 | 0.818007 | 2.453159e-52 | -8.615850e-47 |
| Msa0304300 | Msa0647490 | 0.806186 | 9.295915e-50 | -8.615850e-47 |
| Msa0304300 | Msa0650920 | 0.832963 | 7.001112e-56 | -8.615850e-47 |
| Msa0304300 | Msa0654870 | 0.804602 | 1.996979e-49 | -8.615850e-47 |
| Msa0304300 | Msa0663900 | 0.816693 | 4.848921e-52 | -8.615850e-47 |
| Msa0304300 | Msa0664960 | 0.807982 | 3.873715e-50 | -8.615850e-47 |
| Msa0304300 | Msa0669850 | 0.814351 | 1.610592e-51 | -8.615850e-47 |
| Msa0304300 | Msa0677290 | 0.825553 | 4.403436e-54 | -8.615850e-47 |
| Msa0304300 | Msa0678860 | 0.825172 | 5.417427e-54 | -8.615850e-47 |
| Msa0304300 | Msa0680240 | 0.835564 | 1.559257e-56 | -8.615850e-47 |
| Msa0304300 | Msa0682780 | 0.806909 | 6.543742e-50 | -8.615850e-47 |
| Msa0304300 | Msa0687630 | 0.854647 | 1.070606e-61 | -8.615850e-47 |
| Msa0304300 | Msa0690160 | 0.803574 | 3.267108e-49 | -8.615850e-47 |
| Msa0304300 | Msa0692080 | 0.806580 | 7.678804e-50 | -8.615850e-47 |
| Msa0304300 | Msa0692840 | 0.801508 | 8.710079e-49 | -8.615850e-47 |
| Msa0304300 | Msa0692940 | 0.808940 | 2.418819e-50 | -8.615850e-47 |
| Msa0304300 | Msa0696620 | 0.805876 | 1.080120e-49 | -8.615850e-47 |
| Msa0304300 | Msa0703230 | 0.838033 | 3.656553e-57 | -8.615850e-47 |
| Msa0304300 | Msa0706370 | 0.801935 | 7.119552e-49 | -8.615850e-47 |
| Msa0304300 | Msa0707390 | 0.815923 | 7.208823e-52 | -8.615850e-47 |
| Msa0304300 | Msa0711490 | 0.818932 | 1.514439e-52 | -8.615850e-47 |
| Msa0304300 | Msa0712310 | 0.800007 | 1.763289e-48 | -8.615850e-47 |
| Msa0304300 | Msa0713820 | 0.801536 | 8.596915e-49 | -8.615850e-47 |
| Msa0304300 | Msa0715010 | -0.822355 | 2.476504e-53 | -8.615850e-47 |
| Msa0304300 | Msa0718740 | 0.839979 | 1.146064e-57 | -8.615850e-47 |
| Msa0304300 | Msa0722810 | 0.801355 | 9.362308e-49 | -8.615850e-47 |
| Msa0304300 | Msa0722960 | 0.803510 | 3.367622e-49 | -8.615850e-47 |
| Msa0304300 | Msa0740040 | 0.810507 | 1.113659e-50 | -8.615850e-47 |
| Msa0304300 | Msa0747700 | 0.804065 | 2.582936e-49 | -8.615850e-47 |
| Msa0304300 | Msa0750880 | 0.800560 | 1.361050e-48 | -8.615850e-47 |
| Msa0304300 | Msa0750920 | 0.827594 | 1.435098e-54 | -8.615850e-47 |
| Msa0304300 | Msa0755340 | 0.833747 | 4.466029e-56 | -8.615850e-47 |
| Msa0304300 | Msa0787750 | 0.809190 | 2.139119e-50 | -8.615850e-47 |
| Msa0304300 | Msa0797120 | 0.802133 | 6.481530e-49 | -8.615850e-47 |
| Msa0304300 | Msa0797750 | 0.826464 | 2.673662e-54 | -8.615850e-47 |
| Msa0304300 | Msa0798000 | -0.830861 | 2.313255e-55 | -8.615850e-47 |
| Msa0304300 | Msa0813720 | 0.817209 | 3.713677e-52 | -8.615850e-47 |
| Msa0304300 | Msa0814250 | 0.804071 | 2.576119e-49 | -8.615850e-47 |
| Msa0304300 | Msa0824640 | 0.825996 | 3.456496e-54 | -8.615850e-47 |
| Msa0304300 | Msa0825310 | 0.805715 | 1.167500e-49 | -8.615850e-47 |
| Msa0304300 | Msa0830990 | 0.800963 | 1.126453e-48 | -8.615850e-47 |
| Msa0304300 | Msa0836660 | -0.800740 | 1.250664e-48 | -8.615850e-47 |
| Msa0304300 | Msa0845750 | 0.805807 | 1.116677e-49 | -8.615850e-47 |
| Msa0304300 | Msa0847080 | 0.807093 | 5.981171e-50 | -8.615850e-47 |
| Msa0304300 | Msa0850960 | 0.812485 | 4.139836e-51 | -8.615850e-47 |
| Msa0304300 | Msa0864010 | 0.835260 | 1.860717e-56 | -8.615850e-47 |
| Msa0304300 | Msa0876200 | 0.812063 | 5.119866e-51 | -8.615850e-47 |
| Msa0304300 | Msa0900630 | 0.813501 | 2.479156e-51 | -8.615850e-47 |
| Msa0304300 | Msa0930780 | 0.811864 | 5.657258e-51 | -8.615850e-47 |
| Msa0304300 | Msa0937670 | 0.812327 | 4.482609e-51 | -8.615850e-47 |
| Msa0304300 | Msa0939790 | 0.812626 | 3.856298e-51 | -8.615850e-47 |
| Msa0304300 | Msa0966270 | 0.817762 | 2.787659e-52 | -8.615850e-47 |
| Msa0304300 | Msa0974810 | 0.810024 | 1.415675e-50 | -8.615850e-47 |
| Msa0304300 | Msa1018050 | 0.801440 | 8.994122e-49 | -8.615850e-47 |
| Msa0304300 | Msa1018790 | 0.803292 | 3.736828e-49 | -8.615850e-47 |
| Msa0304300 | Msa1019240 | 0.826873 | 2.136616e-54 | -8.615850e-47 |
| Msa0304300 | Msa1019260 | 0.827582 | 1.445123e-54 | -8.615850e-47 |
| Msa0304300 | Msa1081150 | 0.824589 | 7.437628e-54 | -8.615850e-47 |
| Msa0304300 | Msa1082700 | 0.819502 | 1.122903e-52 | -8.615850e-47 |
| Msa0304300 | Msa1084470 | 0.803948 | 2.731786e-49 | -8.615850e-47 |
| Msa0304300 | Msa1104140 | 0.821454 | 4.002613e-53 | -8.615850e-47 |
| Msa0304300 | Msa1104210 | 0.817453 | 3.271947e-52 | -8.615850e-47 |
| Msa0304300 | Msa1106700 | 0.801037 | 1.087516e-48 | -8.615850e-47 |
| Msa0304300 | Msa1119200 | 0.808246 | 3.402545e-50 | -8.615850e-47 |
| Msa0304300 | Msa1126510 | 0.843280 | 1.544433e-58 | -8.615850e-47 |
| Msa0304300 | Msa1126770 | 0.842446 | 2.573262e-58 | -8.615850e-47 |
| Msa0304300 | Msa1127890 | 0.823471 | 1.360628e-53 | -8.615850e-47 |
| Msa0304300 | Msa1134110 | 0.817532 | 3.140005e-52 | -8.615850e-47 |
| Msa0304300 | Msa1138870 | 0.804306 | 2.301030e-49 | -8.615850e-47 |
| Msa0304300 | Msa1165870 | 0.815051 | 1.126693e-51 | -8.615850e-47 |
| Msa0304300 | Msa1166010 | 0.815303 | 9.905435e-52 | -8.615850e-47 |
| Msa0304300 | Msa1166330 | 0.811026 | 8.600385e-51 | -8.615850e-47 |
| Msa0304300 | Msa1166340 | 0.814430 | 1.546629e-51 | -8.615850e-47 |
| Msa0304300 | Msa1166860 | 0.838298 | 3.124105e-57 | -8.615850e-47 |
| Msa0304300 | Msa1166870 | 0.820838 | 5.550349e-53 | -8.615850e-47 |
| Msa0304300 | Msa1174100 | 0.801619 | 8.268514e-49 | -8.615850e-47 |
| Msa0304300 | Msa1184370 | 0.836942 | 6.960671e-57 | -8.615850e-47 |
| Msa0304300 | Msa1201830 | 0.814043 | 1.883567e-51 | -8.615850e-47 |
| Msa0304300 | Msa1204250 | 0.805522 | 1.281530e-49 | -8.615850e-47 |
| Msa0304300 | Msa1226620 | 0.842663 | 2.253338e-58 | -8.615850e-47 |
| Msa0304300 | Msa1227690 | 0.827924 | 1.195588e-54 | -8.615850e-47 |
| Msa0304300 | Msa1236960 | 0.808898 | 2.470392e-50 | -8.615850e-47 |
| Msa0304300 | Msa1237030 | 0.805081 | 1.585638e-49 | -8.615850e-47 |
| Msa0304300 | Msa1249870 | 0.805507 | 1.291114e-49 | -8.615850e-47 |
| Msa0304300 | Msa1252190 | 0.832239 | 1.059065e-55 | -8.615850e-47 |
| Msa0304300 | Msa1254610 | 0.815221 | 1.032886e-51 | -8.615850e-47 |
| Msa0304300 | Msa1254710 | 0.817385 | 3.389398e-52 | -8.615850e-47 |
| Msa0304300 | Msa1272460 | 0.812367 | 4.392847e-51 | -8.615850e-47 |
| Msa0304300 | Msa1281190 | 0.823301 | 1.491292e-53 | -8.615850e-47 |
| Msa0304300 | Msa1283990 | 0.825576 | 4.347365e-54 | -8.615850e-47 |
| Msa0304300 | Msa1292830 | 0.823718 | 1.191309e-53 | -8.615850e-47 |
| Msa0304300 | Msa1294840 | 0.811595 | 6.470766e-51 | -8.615850e-47 |
| Msa0304300 | Msa1299360 | 0.816310 | 5.905608e-52 | -8.615850e-47 |
| Msa0304300 | Msa1306990 | 0.815160 | 1.066049e-51 | -8.615850e-47 |
| Msa0304300 | Msa1307950 | 0.848310 | 6.650738e-60 | -8.615850e-47 |
| Msa0304300 | Msa1310690 | 0.815807 | 7.650865e-52 | -8.615850e-47 |
| Msa0304300 | Msa1316780 | 0.808963 | 2.391648e-50 | -8.615850e-47 |
| Msa0304300 | Msa1316830 | 0.828193 | 1.029761e-54 | -8.615850e-47 |
| Msa0304300 | Msa1318120 | 0.829957 | 3.848705e-55 | -8.615850e-47 |
| Msa0304300 | Msa1333110 | 0.805979 | 1.027445e-49 | -8.615850e-47 |
| Msa0304300 | Msa1335940 | 0.852884 | 3.442641e-61 | -8.615850e-47 |
| Msa0304300 | Msa1341070 | 0.820768 | 5.760853e-53 | -8.615850e-47 |
| Msa0304300 | Msa1344850 | 0.835904 | 1.278463e-56 | -8.615850e-47 |
| Msa0304300 | Msa1353060 | 0.800240 | 1.581349e-48 | -8.615850e-47 |
| Msa0304300 | Msa1363330 | 0.820792 | 5.688332e-53 | -8.615850e-47 |
| Msa0304300 | Msa1365150 | 0.843498 | 1.350640e-58 | -8.615850e-47 |
| Msa0304300 | Msa1367880 | 0.830875 | 2.295598e-55 | -8.615850e-47 |
| Msa0304300 | Msa1370860 | 0.819966 | 8.799754e-53 | -8.615850e-47 |
| Msa0304300 | Msa1373330 | 0.812083 | 5.068246e-51 | -8.615850e-47 |
| Msa0304300 | Msa1379760 | 0.814684 | 1.359454e-51 | -8.615850e-47 |
| Msa0304300 | Msa1382410 | 0.816568 | 5.172108e-52 | -8.615850e-47 |
| Msa0304300 | Msa1386600 | 0.820755 | 5.799388e-53 | -8.615850e-47 |
| Msa0304300 | Msa1397050 | 0.800762 | 1.237998e-48 | -8.615850e-47 |
| Msa0304300 | Msa1397810 | 0.809476 | 1.857281e-50 | -8.615850e-47 |
| Msa0304300 | Msa1403930 | -0.803799 | 2.933431e-49 | -8.615850e-47 |
| Msa0304300 | Msa1404190 | 0.868655 | 5.556208e-66 | -8.615850e-47 |
| Msa0304300 | Msa1406040 | 0.818336 | 2.067048e-52 | -8.615850e-47 |
| Msa0304300 | Msa1417530 | 0.818947 | 1.502506e-52 | -8.615850e-47 |
| Msa0304300 | Msa1431040 | 0.802289 | 6.020321e-49 | -8.615850e-47 |
| Msa0304300 | Msa1435750 | 0.806775 | 6.981772e-50 | -8.615850e-47 |
| Msa0304300 | Msa1438640 | 0.819420 | 1.172348e-52 | -8.615850e-47 |
| Msa0304300 | Msa1440260 | -0.807966 | 3.904914e-50 | -8.615850e-47 |
| Msa0304300 | Msa1442850 | 0.832295 | 1.025380e-55 | -8.615850e-47 |
| Msa0304300 | Msa1448690 | 0.818090 | 2.349940e-52 | -8.615850e-47 |
| Msa0304300 | Msa1450280 | 0.809714 | 1.650954e-50 | -8.615850e-47 |
| Msa0304300 | Msa1461490 | 0.830111 | 3.530670e-55 | -8.615850e-47 |
| Msa0304300 | Msa1465080 | 0.825161 | 5.451097e-54 | -8.615850e-47 |
| Msa0304300 | Msa1466990 | 0.807847 | 4.139112e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0304300 | MtrunA17_Chr2g0332561 | 96.218 | 238 | 9 | 0 | 1 | 238 | 1 | 238 | 2.80e-173 | 476 |
| Msa0304300 | MtrunA17_Chr6g0449471 | 87.395 | 238 | 29 | 1 | 1 | 238 | 1 | 237 | 8.50e-154 | 426 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0304300 | AT1G31817.1 | 54.237 | 177 | 76 | 2 | 63 | 238 | 142 | 314 | 3.87e-64 | 202 |
Find 74 sgRNAs with CRISPR-Local
Find 191 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGAGATTGGTGGGAATTTC+AGG | 0.127018 | 2_3:+61612440 | Msa0304300:CDS |
| TCCCTATCCCGCGTAAAATT+TGG | 0.128286 | 2_3:-61612388 | None:intergenic |
| AATCAAAATAATTTGCAATT+TGG | 0.161946 | 2_3:-61613210 | None:intergenic |
| TCTCAGCCTTATTCTCAATT+AGG | 0.186612 | 2_3:-61612423 | None:intergenic |
| ATGGAAGAAAGAATTGAAAT+TGG | 0.207263 | 2_3:-61613175 | None:intergenic |
| TATTATTAATTGCAAGGTTT+GGG | 0.260014 | 2_3:+61613104 | Msa0304300:three_prime_UTR |
| TTGGCAGTCTGCAGCCATTA+TGG | 0.260348 | 2_3:-61612882 | None:intergenic |
| AATCAGGGCAAAAGCTTTCT+AGG | 0.277751 | 2_3:+61612662 | Msa0304300:CDS |
| CTCAGCCTTATTCTCAATTA+GGG | 0.278381 | 2_3:-61612422 | None:intergenic |
| AATTGAAATTGGACTATTAC+AGG | 0.299489 | 2_3:-61613164 | None:intergenic |
| CCCTGATTTCATATCTTTCA+AGG | 0.313093 | 2_3:-61612647 | None:intergenic |
| GGACGAAGATCTAGAAGTTT+GGG | 0.313205 | 2_3:+61612715 | Msa0304300:CDS |
| TAACTCCCTAATTGAGAATA+AGG | 0.315947 | 2_3:+61612417 | Msa0304300:CDS |
| AACTAGATACGTCGTTTCTT+TGG | 0.319042 | 2_3:-61612901 | None:intergenic |
| TGGCAGTCTGCAGCCATTAT+GGG | 0.322578 | 2_3:-61612881 | None:intergenic |
| TGGACGAAGATCTAGAAGTT+TGG | 0.345854 | 2_3:+61612714 | Msa0304300:CDS |
| GAAAATGAAAAGGGTGTTAT+GGG | 0.347824 | 2_3:+61612493 | Msa0304300:CDS |
| TCCTTGAAAGATATGAAATC+AGG | 0.348721 | 2_3:+61612646 | Msa0304300:CDS |
| AGAAAATGAAAAGGGTGTTA+TGG | 0.348875 | 2_3:+61612492 | Msa0304300:CDS |
| GTATTATTAATTGCAAGGTT+TGG | 0.358354 | 2_3:+61613103 | Msa0304300:three_prime_UTR |
| CTTGGATGAAGATATAGTTT+AGG | 0.370036 | 2_3:+61612959 | Msa0304300:three_prime_UTR |
| GAAACTGCAGGATATGTTAG+AGG | 0.388568 | 2_3:+61612292 | Msa0304300:intron |
| AACGTTGAGCGTGTTATTGT+TGG | 0.404887 | 2_3:-61610141 | None:intergenic |
| GTATCTTCAATGTATACAAT+TGG | 0.413544 | 2_3:-61612847 | None:intergenic |
| AATTTGGAATTATAATTTGA+TGG | 0.417338 | 2_3:-61613194 | None:intergenic |
| GTAAAACTTAGTGGCTCTGC+TGG | 0.418753 | 2_3:+61612622 | Msa0304300:CDS |
| ACAACTCGTCGTCCCCATAA+TGG | 0.428444 | 2_3:+61612868 | Msa0304300:CDS |
| AAAGGAAATGTAAAACTTAG+TGG | 0.428546 | 2_3:+61612613 | Msa0304300:CDS |
| TGGTGGGAATTTCAGGAAGA+TGG | 0.430749 | 2_3:+61612447 | Msa0304300:CDS |
| TGTACAAAATGTAAACATAT+AGG | 0.438212 | 2_3:-61613036 | None:intergenic |
| GTGTTATTGTTGGGTTGGGC+TGG | 0.448257 | 2_3:-61610131 | None:intergenic |
| TGAGCGTGTTATTGTTGGGT+TGG | 0.452094 | 2_3:-61610136 | None:intergenic |
| GAGCGTGTTATTGTTGGGTT+GGG | 0.465598 | 2_3:-61610135 | None:intergenic |
| TCTTCCATTTGCCATGTCCA+TGG | 0.468427 | 2_3:+61610271 | Msa0304300:CDS |
| GTTACAGTGACCGATTCTAA+AGG | 0.474490 | 2_3:+61612595 | Msa0304300:CDS |
| AAGTGTAGAAGAAAATGAAA+AGG | 0.475421 | 2_3:+61612483 | Msa0304300:CDS |
| GTGCAAGCTGGGGTTTGAAC+GGG | 0.482961 | 2_3:+61612323 | Msa0304300:CDS |
| AGTGTAGAAGAAAATGAAAA+GGG | 0.484709 | 2_3:+61612484 | Msa0304300:CDS |
| AGATCCATGGACATGGCAAA+TGG | 0.487188 | 2_3:-61610275 | None:intergenic |
| ATTGAGAATAAGGCTGAGAT+TGG | 0.495193 | 2_3:+61612427 | Msa0304300:CDS |
| AGAATAAGGCTGAGATTGGT+GGG | 0.498277 | 2_3:+61612431 | Msa0304300:CDS |
| TGAAGAAGCTTTATTTGACT+TGG | 0.498894 | 2_3:+61612941 | Msa0304300:three_prime_UTR |
| AGCAATATTAAGCTGGAGAG+AGG | 0.511053 | 2_3:+61612795 | Msa0304300:CDS |
| AGAATCGGTCACTGTAACAA+AGG | 0.511601 | 2_3:-61612590 | None:intergenic |
| GAGAATAAGGCTGAGATTGG+TGG | 0.515002 | 2_3:+61612430 | Msa0304300:CDS |
| TCTGTTGTCATGAAAGTGAA+TGG | 0.517166 | 2_3:+61612745 | Msa0304300:CDS |
| GCTGTGTATTATTAATTGCA+AGG | 0.521927 | 2_3:+61613098 | Msa0304300:three_prime_UTR |
| CGCAAGAAGGTAGTGTGAGA+TGG | 0.528527 | 2_3:-61610325 | None:intergenic |
| ACGTTGAGCGTGTTATTGTT+GGG | 0.539303 | 2_3:-61610140 | None:intergenic |
| AGTGCAAGCTGGGGTTTGAA+CGG | 0.544456 | 2_3:+61612322 | Msa0304300:CDS |
| TGCTGAAGCAACTGCAGAAG+TGG | 0.550397 | 2_3:+61612690 | Msa0304300:CDS |
| AAATGAAAAGGGTGTTATGG+GGG | 0.550474 | 2_3:+61612495 | Msa0304300:CDS |
| AAAGGCAAGCAATATTAAGC+TGG | 0.550856 | 2_3:+61612788 | Msa0304300:CDS |
| GGCAGTCTGCAGCCATTATG+GGG | 0.556364 | 2_3:-61612880 | None:intergenic |
| CCTTGAAAGATATGAAATCA+GGG | 0.577321 | 2_3:+61612647 | Msa0304300:CDS |
| ATTATTAATTGCAAGGTTTG+GGG | 0.580173 | 2_3:+61613105 | Msa0304300:three_prime_UTR |
| CGAGAAGAGATCCATGGACA+TGG | 0.587730 | 2_3:-61610282 | None:intergenic |
| GAAGCAACTGCAGAAGTGGT+TGG | 0.594231 | 2_3:+61612694 | Msa0304300:CDS |
| GCAATATTAAGCTGGAGAGA+GGG | 0.596295 | 2_3:+61612796 | Msa0304300:CDS |
| AATGAAAAGGGTGTTATGGG+GGG | 0.597424 | 2_3:+61612496 | Msa0304300:CDS |
| TAGAACATTACCGCGCAAGA+AGG | 0.598833 | 2_3:-61610338 | None:intergenic |
| AGGAAGATGGACTTTGTGAG+AGG | 0.603497 | 2_3:+61612460 | Msa0304300:CDS |
| AAAATGAAAAGGGTGTTATG+GGG | 0.604711 | 2_3:+61612494 | Msa0304300:CDS |
| CAAGCTGGGGTTTGAACGGG+AGG | 0.606597 | 2_3:+61612326 | Msa0304300:CDS |
| ATGCAGCGAGAAGAGATCCA+TGG | 0.607270 | 2_3:-61610288 | None:intergenic |
| AGCAGCATATCTCTACTGAA+AGG | 0.611648 | 2_3:+61613076 | Msa0304300:three_prime_UTR |
| TTATACAACGCTCTCACACT+CGG | 0.618361 | 2_3:+61610197 | Msa0304300:five_prime_UTR |
| ATAGCGAAACATCGCGAACG+AGG | 0.620288 | 2_3:-61610242 | None:intergenic |
| GACGAAGATCTAGAAGTTTG+GGG | 0.621557 | 2_3:+61612716 | Msa0304300:CDS |
| CGAACGAGGACGATGGCGCA+CGG | 0.634169 | 2_3:-61610228 | None:intergenic |
| GGTAGTGTGAGATGGAAGTG+TGG | 0.645658 | 2_3:-61610317 | None:intergenic |
| AACATCGCGAACGAGGACGA+TGG | 0.661367 | 2_3:-61610235 | None:intergenic |
| TCTCACACTACCTTCTTGCG+CGG | 0.664409 | 2_3:+61610328 | Msa0304300:CDS |
| ACGAGGACGATGGCGCACGG+TGG | 0.739679 | 2_3:-61610225 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGAAAAAAACAATTATTT+AGG | + | chr2_3:61611457-61611476 | Msa0304300:intron | 10.0% |
| !!! | ATCTTTCTTAATAGTTTTTT+AGG | - | chr2_3:61610775-61610794 | None:intergenic | 15.0% |
| !! | ACTATTAAGAAAGATTTATA+TGG | + | chr2_3:61610780-61610799 | Msa0304300:intron | 15.0% |
| !! | ATAAATTAACATGTATGTAA+CGG | - | chr2_3:61611111-61611130 | None:intergenic | 15.0% |
| !!! | AATTGTTTTAGATATTTGTT+TGG | + | chr2_3:61611368-61611387 | Msa0304300:intron | 15.0% |
| !!! | ATTGTTTTAGATATTTGTTT+GGG | + | chr2_3:61611369-61611388 | Msa0304300:intron | 15.0% |
| !!! | AATTTGGAATTATAATTTGA+TGG | - | chr2_3:61613197-61613216 | None:intergenic | 15.0% |
| !!! | ATTCTATGCTTTTATACTTT+TGG | + | chr2_3:61610481-61610500 | Msa0304300:intron | 20.0% |
| !!! | TTTTGAAGAACATATCATAT+AGG | + | chr2_3:61610934-61610953 | Msa0304300:intron | 20.0% |
| !! | ATATCATATAGGATCTTAAA+TGG | + | chr2_3:61610945-61610964 | Msa0304300:intron | 20.0% |
| !!! | TCCTATATTTTTTACATTAG+CGG | - | chr2_3:61611080-61611099 | None:intergenic | 20.0% |
| !!! | TTATCTCAACAATTTTATGA+GGG | + | chr2_3:61611594-61611613 | Msa0304300:intron | 20.0% |
| !! | TCATCAAATTTGATCTTAAA+TGG | + | chr2_3:61611835-61611854 | Msa0304300:intron | 20.0% |
| !! | AACATACACAAAATGATTTA+TGG | - | chr2_3:61611923-61611942 | None:intergenic | 20.0% |
| !!! | TAAATCATTTTGTGTATGTT+TGG | + | chr2_3:61611923-61611942 | Msa0304300:intron | 20.0% |
| !! | AATGAATTCTAACTTGATTT+GGG | + | chr2_3:61612040-61612059 | Msa0304300:intron | 20.0% |
| !!! | ATTTTTAGCCTTAAATATGT+TGG | + | chr2_3:61612081-61612100 | Msa0304300:intron | 20.0% |
| !! | AAATATGACCAACATATTTA+AGG | - | chr2_3:61612092-61612111 | None:intergenic | 20.0% |
| !!! | TTTTACATTTCCTTTAGAAT+CGG | - | chr2_3:61612608-61612627 | None:intergenic | 20.0% |
| !! | TGTACAAAATGTAAACATAT+AGG | - | chr2_3:61613039-61613058 | None:intergenic | 20.0% |
| !! | TATTATTAATTGCAAGGTTT+GGG | + | chr2_3:61613104-61613123 | Msa0304300:three_prime_UTR | 20.0% |
| !!! | ACTTGTTTTTCTTTACTCAA+CGG | + | chr2_3:61610405-61610424 | Msa0304300:intron | 25.0% |
| ! | ATTCAAATACATAAACCAAC+CGG | - | chr2_3:61610447-61610466 | None:intergenic | 25.0% |
| ! | CTAATCCAATGTAATTACAT+GGG | + | chr2_3:61610842-61610861 | Msa0304300:intron | 25.0% |
| ! | TCAAGAAAATAGAGAAAGTT+TGG | + | chr2_3:61610974-61610993 | Msa0304300:intron | 25.0% |
| ! | ACCGCTAATGTAAAAAATAT+AGG | + | chr2_3:61611076-61611095 | Msa0304300:intron | 25.0% |
| !!! | TCATTTTTAGCTTTTATGAC+AGG | - | chr2_3:61611249-61611268 | None:intergenic | 25.0% |
| ! | TGAGAAATGTTGATCAATTA+GGG | - | chr2_3:61611297-61611316 | None:intergenic | 25.0% |
| ! | TTGAGAAATGTTGATCAATT+AGG | - | chr2_3:61611298-61611317 | None:intergenic | 25.0% |
| ! | ATATGTAACTCTTGTATCTA+TGG | + | chr2_3:61611321-61611340 | Msa0304300:intron | 25.0% |
| !! | AAAACAATTATTTAGGACAC+CGG | + | chr2_3:61611464-61611483 | Msa0304300:intron | 25.0% |
| !! | GTTATCTCAACAATTTTATG+AGG | + | chr2_3:61611593-61611612 | Msa0304300:intron | 25.0% |
| !! | TATCTCAACAATTTTATGAG+GGG | + | chr2_3:61611595-61611614 | Msa0304300:intron | 25.0% |
| !! | TTTCCTTTTTGTTGAAAGAT+TGG | + | chr2_3:61611674-61611693 | Msa0304300:intron | 25.0% |
| ! | GAATGAATTCTAACTTGATT+TGG | + | chr2_3:61612039-61612058 | Msa0304300:intron | 25.0% |
| !! | ATGAATTCTAACTTGATTTG+GGG | + | chr2_3:61612041-61612060 | Msa0304300:intron | 25.0% |
| !! | CATATTTAAGGCTAAAAATC+AGG | - | chr2_3:61612080-61612099 | None:intergenic | 25.0% |
| ! | AAGTGTAGAAGAAAATGAAA+AGG | + | chr2_3:61612483-61612502 | Msa0304300:CDS | 25.0% |
| ! | AGTGTAGAAGAAAATGAAAA+GGG | + | chr2_3:61612484-61612503 | Msa0304300:CDS | 25.0% |
| ! | AAAGGAAATGTAAAACTTAG+TGG | + | chr2_3:61612613-61612632 | Msa0304300:CDS | 25.0% |
| !!! | TGAATGGATTTACTCATTTT+CGG | + | chr2_3:61612761-61612780 | Msa0304300:CDS | 25.0% |
| ! | GTATCTTCAATGTATACAAT+TGG | - | chr2_3:61612850-61612869 | None:intergenic | 25.0% |
| !!! | ACGTATCTAGTTATTTTTAC+AGG | + | chr2_3:61612912-61612931 | Msa0304300:exon | 25.0% |
| !!! | CGTATCTAGTTATTTTTACA+GGG | + | chr2_3:61612913-61612932 | Msa0304300:exon | 25.0% |
| ! | GTATTATTAATTGCAAGGTT+TGG | + | chr2_3:61613103-61613122 | Msa0304300:three_prime_UTR | 25.0% |
| ! | ATTATTAATTGCAAGGTTTG+GGG | + | chr2_3:61613105-61613124 | Msa0304300:three_prime_UTR | 25.0% |
| ! | AATTGAAATTGGACTATTAC+AGG | - | chr2_3:61613167-61613186 | None:intergenic | 25.0% |
| ! | ATGGAAGAAAGAATTGAAAT+TGG | - | chr2_3:61613178-61613197 | None:intergenic | 25.0% |
| TCAATTTAACCCTAAAGTGA+AGG | - | chr2_3:61610379-61610398 | None:intergenic | 30.0% | |
| TGGTTTATAGTAGCACATTA+TGG | + | chr2_3:61610800-61610819 | Msa0304300:intron | 30.0% | |
| TTAGCTACATGGATCAAATT+AGG | - | chr2_3:61610826-61610845 | None:intergenic | 30.0% | |
| !! | ATTACATTGGATTAGCTACA+TGG | - | chr2_3:61610837-61610856 | None:intergenic | 30.0% |
| GCTAATCCAATGTAATTACA+TGG | + | chr2_3:61610841-61610860 | Msa0304300:intron | 30.0% | |
| CTTATCCCATGTAATTACAT+TGG | - | chr2_3:61610850-61610869 | None:intergenic | 30.0% | |
| CAATGTAATTACATGGGATA+AGG | + | chr2_3:61610848-61610867 | Msa0304300:intron | 30.0% | |
| TCAGTTATCTATCACTAACT+GGG | - | chr2_3:61611006-61611025 | None:intergenic | 30.0% | |
| TTCAGTTATCTATCACTAAC+TGG | - | chr2_3:61611007-61611026 | None:intergenic | 30.0% | |
| GACAGGAGATGAATAAATAA+AGG | - | chr2_3:61611232-61611251 | None:intergenic | 30.0% | |
| GAGAAATGTTGATCAATTAG+GGG | - | chr2_3:61611296-61611315 | None:intergenic | 30.0% | |
| AAAATTGTTGAGATAACCTG+AGG | - | chr2_3:61611590-61611609 | None:intergenic | 30.0% | |
| ! | TAGTGATAATGATAGATAGC+AGG | + | chr2_3:61611887-61611906 | Msa0304300:intron | 30.0% |
| CAAGTTAGAATTCATTCAAG+AGG | - | chr2_3:61612036-61612055 | None:intergenic | 30.0% | |
| ATCGTGTCTATTTGATTATG+CGG | - | chr2_3:61612207-61612226 | None:intergenic | 30.0% | |
| AATGTCATCTCAACAATCTT+AGG | + | chr2_3:61612253-61612272 | Msa0304300:intron | 30.0% | |
| TAACTCCCTAATTGAGAATA+AGG | + | chr2_3:61612417-61612436 | Msa0304300:CDS | 30.0% | |
| !! | AGAAAATGAAAAGGGTGTTA+TGG | + | chr2_3:61612492-61612511 | Msa0304300:CDS | 30.0% |
| !! | GAAAATGAAAAGGGTGTTAT+GGG | + | chr2_3:61612493-61612512 | Msa0304300:CDS | 30.0% |
| !! | AAAATGAAAAGGGTGTTATG+GGG | + | chr2_3:61612494-61612513 | Msa0304300:CDS | 30.0% |
| TCCTTGAAAGATATGAAATC+AGG | + | chr2_3:61612646-61612665 | Msa0304300:CDS | 30.0% | |
| CCTTGAAAGATATGAAATCA+GGG | + | chr2_3:61612647-61612666 | Msa0304300:CDS | 30.0% | |
| !!! | TCTAGTTATTTTTACAGGGA+TGG | + | chr2_3:61612917-61612936 | Msa0304300:exon | 30.0% |
| !! | TGAAGAAGCTTTATTTGACT+TGG | + | chr2_3:61612941-61612960 | Msa0304300:three_prime_UTR | 30.0% |
| CTTGGATGAAGATATAGTTT+AGG | + | chr2_3:61612959-61612978 | Msa0304300:three_prime_UTR | 30.0% | |
| GCTGTGTATTATTAATTGCA+AGG | + | chr2_3:61613098-61613117 | Msa0304300:three_prime_UTR | 30.0% | |
| ! | CGGTAGATAGAATGATTTTC+CGG | + | chr2_3:61610425-61610444 | Msa0304300:intron | 35.0% |
| ! | AGATAGAATGATTTTCCGGT+TGG | + | chr2_3:61610429-61610448 | Msa0304300:intron | 35.0% |
| GACTTGTAGATGTTGTAGTA+AGG | + | chr2_3:61610711-61610730 | Msa0304300:intron | 35.0% | |
| TAATTACATGGGATAAGGCT+TGG | + | chr2_3:61610853-61610872 | Msa0304300:intron | 35.0% | |
| ACCTCACTCTCATATCATAT+AGG | + | chr2_3:61610896-61610915 | Msa0304300:intron | 35.0% | |
| TCCTATATGATATGAGAGTG+AGG | - | chr2_3:61610900-61610919 | None:intergenic | 35.0% | |
| TAACATGTATGTAACGGTGT+TGG | - | chr2_3:61611105-61611124 | None:intergenic | 35.0% | |
| !!! | AGGGGTGTTTTTGATTCTAA+GGG | + | chr2_3:61611613-61611632 | Msa0304300:intron | 35.0% |
| !!! | ATTCTAAGGGGTCAGTTTTT+TGG | + | chr2_3:61611626-61611645 | Msa0304300:intron | 35.0% |
| !!! | TTCTAAGGGGTCAGTTTTTT+GGG | + | chr2_3:61611627-61611646 | Msa0304300:intron | 35.0% |
| GCACCAATCTTTCAACAAAA+AGG | - | chr2_3:61611680-61611699 | None:intergenic | 35.0% | |
| GAAATAAGCACGAACAAATC+AGG | - | chr2_3:61611743-61611762 | None:intergenic | 35.0% | |
| GCAGTTTCAAGAGTTTGAAA+AGG | - | chr2_3:61612280-61612299 | None:intergenic | 35.0% | |
| TTTCAAACTCTTGAAACTGC+AGG | + | chr2_3:61612280-61612299 | Msa0304300:intron | 35.0% | |
| !! | CTCAGCCTTATTCTCAATTA+GGG | - | chr2_3:61612425-61612444 | None:intergenic | 35.0% |
| !! | TCTCAGCCTTATTCTCAATT+AGG | - | chr2_3:61612426-61612445 | None:intergenic | 35.0% |
| ATTGAGAATAAGGCTGAGAT+TGG | + | chr2_3:61612427-61612446 | Msa0304300:CDS | 35.0% | |
| !! | AAATGAAAAGGGTGTTATGG+GGG | + | chr2_3:61612495-61612514 | Msa0304300:CDS | 35.0% |
| CCCTGATTTCATATCTTTCA+AGG | - | chr2_3:61612650-61612669 | None:intergenic | 35.0% | |
| TCTGTTGTCATGAAAGTGAA+TGG | + | chr2_3:61612745-61612764 | Msa0304300:CDS | 35.0% | |
| ! | ATGGATTTACTCATTTTCGG+AGG | + | chr2_3:61612764-61612783 | Msa0304300:CDS | 35.0% |
| ! | TTACTCATTTTCGGAGGAAA+AGG | + | chr2_3:61612770-61612789 | Msa0304300:CDS | 35.0% |
| AAAGGCAAGCAATATTAAGC+TGG | + | chr2_3:61612788-61612807 | Msa0304300:CDS | 35.0% | |
| AACTAGATACGTCGTTTCTT+TGG | - | chr2_3:61612904-61612923 | None:intergenic | 35.0% | |
| ! | ACGTTGAGCGTGTTATTGTT+GGG | - | chr2_3:61610143-61610162 | None:intergenic | 40.0% |
| ! | AACGTTGAGCGTGTTATTGT+TGG | - | chr2_3:61610144-61610163 | None:intergenic | 40.0% |
| TTATACAACGCTCTCACACT+CGG | + | chr2_3:61610197-61610216 | Msa0304300:five_prime_UTR | 40.0% | |
| TCTTTCGATGCCTTCACTTT+AGG | + | chr2_3:61610366-61610385 | Msa0304300:intron | 40.0% | |
| CTTTCGATGCCTTCACTTTA+GGG | + | chr2_3:61610367-61610386 | Msa0304300:intron | 40.0% | |
| GTTGAAGTAGCACCTATAGT+AGG | + | chr2_3:61610641-61610660 | Msa0304300:intron | 40.0% | |
| AGCACCTATAGTAGGAAAGA+CGG | + | chr2_3:61610649-61610668 | Msa0304300:intron | 40.0% | |
| TAGGAAAGACGGTGGAAAAT+AGG | + | chr2_3:61610660-61610679 | Msa0304300:intron | 40.0% | |
| !! | GATGAAGTATCGTCAGACAA+AGG | + | chr2_3:61610745-61610764 | Msa0304300:intron | 40.0% |
| TATGAGTGTTACACAGGTGT+CGG | + | chr2_3:61611409-61611428 | Msa0304300:intron | 40.0% | |
| AACTTGATGCCTATGAAGCA+CGG | - | chr2_3:61611557-61611576 | None:intergenic | 40.0% | |
| !! | CAAGTTTTAGTATCCACCTC+AGG | + | chr2_3:61611571-61611590 | Msa0304300:intron | 40.0% |
| ATTGTTGAGATAACCTGAGG+TGG | - | chr2_3:61611587-61611606 | None:intergenic | 40.0% | |
| !!! | GAGGGGTGTTTTTGATTCTA+AGG | + | chr2_3:61611612-61611631 | Msa0304300:intron | 40.0% |
| !! | GGGGTGTTTTTGATTCTAAG+GGG | + | chr2_3:61611614-61611633 | Msa0304300:intron | 40.0% |
| TTGAAAGATTGGTGCAGTAG+TGG | + | chr2_3:61611685-61611704 | Msa0304300:intron | 40.0% | |
| ACAGACAACCAAATCAGGAA+TGG | + | chr2_3:61611796-61611815 | Msa0304300:intron | 40.0% | |
| CAGACAACCAAATCAGGAAT+GGG | + | chr2_3:61611797-61611816 | Msa0304300:intron | 40.0% | |
| AACCAAATCAGGAATGGGAT+TGG | + | chr2_3:61611802-61611821 | Msa0304300:intron | 40.0% | |
| AACCAATCCCATTCCTGATT+TGG | - | chr2_3:61611807-61611826 | None:intergenic | 40.0% | |
| TGTGTGTCTACGAGTAGAAT+TGG | + | chr2_3:61612005-61612024 | Msa0304300:intron | 40.0% | |
| GTGTCTATTTGATTATGCGG+TGG | - | chr2_3:61612204-61612223 | None:intergenic | 40.0% | |
| GAAACTGCAGGATATGTTAG+AGG | + | chr2_3:61612292-61612311 | Msa0304300:intron | 40.0% | |
| !! | AGGATTTTCTAGTGCAAGCT+GGG | + | chr2_3:61612312-61612331 | Msa0304300:CDS | 40.0% |
| ! | TCCAAATTTTACGCGGGATA+GGG | + | chr2_3:61612387-61612406 | Msa0304300:CDS | 40.0% |
| AGAATAAGGCTGAGATTGGT+GGG | + | chr2_3:61612431-61612450 | Msa0304300:CDS | 40.0% | |
| !! | AATGAAAAGGGTGTTATGGG+GGG | + | chr2_3:61612496-61612515 | Msa0304300:CDS | 40.0% |
| AGAATCGGTCACTGTAACAA+AGG | - | chr2_3:61612593-61612612 | None:intergenic | 40.0% | |
| ! | GTTACAGTGACCGATTCTAA+AGG | + | chr2_3:61612595-61612614 | Msa0304300:CDS | 40.0% |
| AATCAGGGCAAAAGCTTTCT+AGG | + | chr2_3:61612662-61612681 | Msa0304300:CDS | 40.0% | |
| TGGACGAAGATCTAGAAGTT+TGG | + | chr2_3:61612714-61612733 | Msa0304300:CDS | 40.0% | |
| GGACGAAGATCTAGAAGTTT+GGG | + | chr2_3:61612715-61612734 | Msa0304300:CDS | 40.0% | |
| GACGAAGATCTAGAAGTTTG+GGG | + | chr2_3:61612716-61612735 | Msa0304300:CDS | 40.0% | |
| AGCAATATTAAGCTGGAGAG+AGG | + | chr2_3:61612795-61612814 | Msa0304300:CDS | 40.0% | |
| GCAATATTAAGCTGGAGAGA+GGG | + | chr2_3:61612796-61612815 | Msa0304300:CDS | 40.0% | |
| AGCAGCATATCTCTACTGAA+AGG | + | chr2_3:61613076-61613095 | Msa0304300:three_prime_UTR | 40.0% | |
| ! | GAGCGTGTTATTGTTGGGTT+GGG | - | chr2_3:61610138-61610157 | None:intergenic | 45.0% |
| ! | TGAGCGTGTTATTGTTGGGT+TGG | - | chr2_3:61610139-61610158 | None:intergenic | 45.0% |
| TCTTCCATTTGCCATGTCCA+TGG | + | chr2_3:61610271-61610290 | Msa0304300:CDS | 45.0% | |
| AGATCCATGGACATGGCAAA+TGG | - | chr2_3:61610278-61610297 | None:intergenic | 45.0% | |
| TAGAACATTACCGCGCAAGA+AGG | - | chr2_3:61610341-61610360 | None:intergenic | 45.0% | |
| ACCTATAGTAGGAAAGACGG+TGG | + | chr2_3:61610652-61610671 | Msa0304300:intron | 45.0% | |
| TCCACCGTCTTTCCTACTAT+AGG | - | chr2_3:61610656-61610675 | None:intergenic | 45.0% | |
| CTGCATCAAGCTATGAAGCA+TGG | + | chr2_3:61611031-61611050 | Msa0304300:intron | 45.0% | |
| ATGAAGCATGGACTCTGACA+CGG | + | chr2_3:61611043-61611062 | Msa0304300:intron | 45.0% | |
| !! | TTTGTTTGGGTTGTCCGACA+CGG | + | chr2_3:61611382-61611401 | Msa0304300:intron | 45.0% |
| TACTTCGACACTCCTACGAT+CGG | - | chr2_3:61611438-61611457 | None:intergenic | 45.0% | |
| ! | AAGATTGGTGCAGTAGTGGA+TGG | + | chr2_3:61611689-61611708 | Msa0304300:intron | 45.0% |
| !! | AGATTGGTGCAGTAGTGGAT+GGG | + | chr2_3:61611690-61611709 | Msa0304300:intron | 45.0% |
| AGCTCACAGACAACCAAATC+AGG | + | chr2_3:61611791-61611810 | Msa0304300:intron | 45.0% | |
| !! | GAGGATTTTCTAGTGCAAGC+TGG | + | chr2_3:61612311-61612330 | Msa0304300:CDS | 45.0% |
| !! | GGATTTTCTAGTGCAAGCTG+GGG | + | chr2_3:61612313-61612332 | Msa0304300:CDS | 45.0% |
| ! | GTGCTCGTCCAAATTTTACG+CGG | + | chr2_3:61612380-61612399 | Msa0304300:CDS | 45.0% |
| ! | TGCTCGTCCAAATTTTACGC+GGG | + | chr2_3:61612381-61612400 | Msa0304300:CDS | 45.0% |
| ! | GTCCAAATTTTACGCGGGAT+AGG | + | chr2_3:61612386-61612405 | Msa0304300:CDS | 45.0% |
| TCCCTATCCCGCGTAAAATT+TGG | - | chr2_3:61612391-61612410 | None:intergenic | 45.0% | |
| GAGAATAAGGCTGAGATTGG+TGG | + | chr2_3:61612430-61612449 | Msa0304300:CDS | 45.0% | |
| CTGAGATTGGTGGGAATTTC+AGG | + | chr2_3:61612440-61612459 | Msa0304300:CDS | 45.0% | |
| TGGTGGGAATTTCAGGAAGA+TGG | + | chr2_3:61612447-61612466 | Msa0304300:CDS | 45.0% | |
| ! | AGGAAGATGGACTTTGTGAG+AGG | + | chr2_3:61612460-61612479 | Msa0304300:CDS | 45.0% |
| ! | GTAAAACTTAGTGGCTCTGC+TGG | + | chr2_3:61612622-61612641 | Msa0304300:CDS | 45.0% |
| ! | GAGGGATTTTCTGATTCTCG+AGG | + | chr2_3:61612814-61612833 | Msa0304300:CDS | 45.0% |
| ATAGCGAAACATCGCGAACG+AGG | - | chr2_3:61610245-61610264 | None:intergenic | 50.0% | |
| CGAGAAGAGATCCATGGACA+TGG | - | chr2_3:61610285-61610304 | None:intergenic | 50.0% | |
| ATGCAGCGAGAAGAGATCCA+TGG | - | chr2_3:61610291-61610310 | None:intergenic | 50.0% | |
| GGTAGTGTGAGATGGAAGTG+TGG | - | chr2_3:61610320-61610339 | None:intergenic | 50.0% | |
| CGCAAGAAGGTAGTGTGAGA+TGG | - | chr2_3:61610328-61610347 | None:intergenic | 50.0% | |
| TCTCACACTACCTTCTTGCG+CGG | + | chr2_3:61610328-61610347 | Msa0304300:CDS | 50.0% | |
| CGGTGGAAAATAGGCTTCTG+TGG | + | chr2_3:61610669-61610688 | Msa0304300:intron | 50.0% | |
| AACACTCATACGAGCCGTGT+CGG | - | chr2_3:61611399-61611418 | None:intergenic | 50.0% | |
| GGCTCGTATGAGTGTTACAC+AGG | + | chr2_3:61611403-61611422 | Msa0304300:intron | 50.0% | |
| TATGAAGCACGGACACGTCT+AGG | - | chr2_3:61611546-61611565 | None:intergenic | 50.0% | |
| TAGACGTGTCCGTGCTTCAT+AGG | + | chr2_3:61611545-61611564 | Msa0304300:intron | 50.0% | |
| AGTGCAAGCTGGGGTTTGAA+CGG | + | chr2_3:61612322-61612341 | Msa0304300:CDS | 50.0% | |
| TGCTGAAGCAACTGCAGAAG+TGG | + | chr2_3:61612690-61612709 | Msa0304300:CDS | 50.0% | |
| GAAGCAACTGCAGAAGTGGT+TGG | + | chr2_3:61612694-61612713 | Msa0304300:CDS | 50.0% | |
| ACAACTCGTCGTCCCCATAA+TGG | + | chr2_3:61612868-61612887 | Msa0304300:CDS | 50.0% | |
| TGGCAGTCTGCAGCCATTAT+GGG | - | chr2_3:61612884-61612903 | None:intergenic | 50.0% | |
| TTGGCAGTCTGCAGCCATTA+TGG | - | chr2_3:61612885-61612904 | None:intergenic | 50.0% | |
| AACATCGCGAACGAGGACGA+TGG | - | chr2_3:61610238-61610257 | None:intergenic | 55.0% | |
| ! | ACGTGTCGTACGGGTGTCAT+AGG | + | chr2_3:61611493-61611512 | Msa0304300:intron | 55.0% |
| !! | GGTGCAGTAGTGGATGGGAT+TGG | + | chr2_3:61611695-61611714 | Msa0304300:intron | 55.0% |
| GTGCAAGCTGGGGTTTGAAC+GGG | + | chr2_3:61612323-61612342 | Msa0304300:CDS | 55.0% | |
| GGCAGTCTGCAGCCATTATG+GGG | - | chr2_3:61612883-61612902 | None:intergenic | 55.0% | |
| CCGTACGACACGTGTCGAAC+CGG | - | chr2_3:61611486-61611505 | None:intergenic | 60.0% | |
| ! | CCGGTTCGACACGTGTCGTA+CGG | + | chr2_3:61611483-61611502 | Msa0304300:intron | 60.0% |
| CGGTTCGACACGTGTCGTAC+GGG | + | chr2_3:61611484-61611503 | Msa0304300:intron | 60.0% | |
| ! | GTCTAGGACTAGGCGTGTCG+CGG | - | chr2_3:61611530-61611549 | None:intergenic | 60.0% |
| ! | GCACGGACACGTCTAGGACT+AGG | - | chr2_3:61611540-61611559 | None:intergenic | 60.0% |
| CAAGCTGGGGTTTGAACGGG+AGG | + | chr2_3:61612326-61612345 | Msa0304300:CDS | 60.0% | |
| CGAACGAGGACGATGGCGCA+CGG | - | chr2_3:61610231-61610250 | None:intergenic | 65.0% | |
| !! | AGGTGTCGGACGCCGATCGT+AGG | + | chr2_3:61611423-61611442 | Msa0304300:intron | 65.0% |
| ACGAGGACGATGGCGCACGG+TGG | - | chr2_3:61610228-61610247 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 61610134 | 61613219 | 61610134 | ID=Msa0304300;Name=Msa0304300 |
| chr2_3 | mRNA | 61610134 | 61613219 | 61610134 | ID=Msa0304300-mRNA-1;Parent=Msa0304300;Name=Msa0304300-mRNA-1;_AED=0.01;_eAED=0.01;_QI=119|1|1|1|1|1|2|298|238 |
| chr2_3 | exon | 61610134 | 61610349 | 61610134 | ID=Msa0304300-mRNA-1:exon:20415;Parent=Msa0304300-mRNA-1 |
| chr2_3 | exon | 61612302 | 61613219 | 61612302 | ID=Msa0304300-mRNA-1:exon:20416;Parent=Msa0304300-mRNA-1 |
| chr2_3 | five_prime_UTR | 61610134 | 61610252 | 61610134 | ID=Msa0304300-mRNA-1:five_prime_utr;Parent=Msa0304300-mRNA-1 |
| chr2_3 | CDS | 61610253 | 61610349 | 61610253 | ID=Msa0304300-mRNA-1:cds;Parent=Msa0304300-mRNA-1 |
| chr2_3 | CDS | 61612302 | 61612921 | 61612302 | ID=Msa0304300-mRNA-1:cds;Parent=Msa0304300-mRNA-1 |
| chr2_3 | three_prime_UTR | 61612922 | 61613219 | 61612922 | ID=Msa0304300-mRNA-1:three_prime_utr;Parent=Msa0304300-mRNA-1 |
| Gene Sequence |
| Protein sequence |
