Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0466900 | GAU22922.1 | 77.984 | 1022 | 201 | 8 | 1 | 1011 | 1 | 1009 | 0.0 | 1596 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0466900 | sp|Q7Y1C4|BRC2B_ARATH | 52.877 | 643 | 267 | 11 | 389 | 1014 | 258 | 881 | 0.0 | 634 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0466900 | A0A2Z6MBM2 | 77.984 | 1022 | 201 | 8 | 1 | 1011 | 1 | 1009 | 0.0 | 1596 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0020540 | Msa0466900 | 0.832199 | 1.083138e-55 | -8.615850e-47 |
Msa0159590 | Msa0466900 | 0.818246 | 2.166017e-52 | -8.615850e-47 |
Msa0159620 | Msa0466900 | 0.812158 | 4.880477e-51 | -8.615850e-47 |
Msa0413170 | Msa0466900 | 0.810931 | 9.015868e-51 | -8.615850e-47 |
Msa0421150 | Msa0466900 | 0.830816 | 2.373621e-55 | -8.615850e-47 |
Msa0421750 | Msa0466900 | 0.813075 | 3.075148e-51 | -8.615850e-47 |
Msa0466900 | Msa0513620 | 0.909603 | 4.747110e-82 | -8.615850e-47 |
Msa0466900 | Msa0545920 | 0.806614 | 7.551427e-50 | -8.615850e-47 |
Msa0466900 | Msa0601720 | 0.801054 | 1.079066e-48 | -8.615850e-47 |
Msa0466900 | Msa0681050 | 0.800008 | 1.762581e-48 | -8.615850e-47 |
Msa0466900 | Msa0713920 | 0.801057 | 1.077567e-48 | -8.615850e-47 |
Msa0466900 | Msa0769700 | 0.801643 | 8.171992e-49 | -8.615850e-47 |
Msa0466900 | Msa1076020 | 0.800343 | 1.506593e-48 | -8.615850e-47 |
Msa0466900 | Msa1268540 | 0.813963 | 1.961771e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0466900 | MtrunA17_Chr3g0121071 | 93.162 | 702 | 48 | 0 | 324 | 1025 | 106 | 807 | 0.0 | 1363 |
Msa0466900 | MtrunA17_Chr3g0121071 | 64.000 | 250 | 63 | 4 | 1 | 227 | 1 | 246 | 1.16e-76 | 273 |
Msa0466900 | MtrunA17_Chr3g0121071 | 72.973 | 74 | 20 | 0 | 252 | 325 | 106 | 179 | 1.42e-24 | 111 |
Msa0466900 | MtrunA17_Chr5g0421981 | 67.005 | 788 | 172 | 8 | 225 | 1011 | 18 | 718 | 0.0 | 1008 |
Msa0466900 | MtrunA17_Chr5g0421981 | 58.947 | 190 | 47 | 4 | 66 | 253 | 2 | 162 | 5.33e-52 | 197 |
Msa0466900 | MtrunA17_Chr6g0461811 | 80.781 | 333 | 52 | 2 | 615 | 946 | 4 | 325 | 0.0 | 563 |
Msa0466900 | MtrunA17_Chr6g0461821 | 86.567 | 67 | 9 | 0 | 946 | 1012 | 22 | 88 | 2.00e-33 | 124 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0466900 | AT5G01630.1 | 52.877 | 643 | 267 | 11 | 389 | 1014 | 258 | 881 | 0.0 | 634 |
Msa0466900 | AT4G00020.1 | 51.724 | 638 | 270 | 10 | 389 | 1010 | 258 | 873 | 0.0 | 624 |
Msa0466900 | AT4G00020.3 | 51.724 | 638 | 270 | 10 | 389 | 1010 | 258 | 873 | 0.0 | 624 |
Msa0466900 | AT4G00020.4 | 51.724 | 638 | 270 | 10 | 389 | 1010 | 258 | 873 | 0.0 | 623 |
Msa0466900 | AT4G00020.5 | 51.724 | 638 | 270 | 10 | 389 | 1010 | 258 | 873 | 0.0 | 623 |
Msa0466900 | AT4G00020.2 | 50.157 | 638 | 275 | 12 | 389 | 1010 | 258 | 868 | 0.0 | 588 |
Find 239 sgRNAs with CRISPR-Local
Find 530 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TAACATAGCCAAATGCTTTA+TGG | 0.174025 | 3_3:-68017977 | None:intergenic |
AATATAACTCACATTTAATT+TGG | 0.178578 | 3_3:-68016549 | None:intergenic |
GGGAGGTCGTTATCTATTTC+TGG | 0.198566 | 3_3:+68012104 | Msa0466900:CDS |
GTTAGAGCAAAGACGTTATT+AGG | 0.201204 | 3_3:+68011183 | Msa0466900:CDS |
CAATTATCCTCTGGTGCTTC+TGG | 0.202376 | 3_3:+68012856 | Msa0466900:CDS |
CTGGCAGTTTGGAATTTAAT+TGG | 0.207082 | 3_3:-68012080 | None:intergenic |
AGGGTTTAACTAAGCAAATT+AGG | 0.210571 | 3_3:-68010727 | None:intergenic |
ATTGCCTCATTTGCAGCTTA+TGG | 0.211304 | 3_3:+68011509 | Msa0466900:CDS |
ATTGCCTCATTTGCAGCTTA+TGG | 0.211304 | 3_3:+68011725 | Msa0466900:CDS |
ATTGCCTCATTTGCAGCTTA+TGG | 0.211304 | 3_3:+68011941 | Msa0466900:CDS |
ACAACAGATTGGAACTTAAT+TGG | 0.219435 | 3_3:-68011648 | None:intergenic |
ACAACAGATTGGAACTTAAT+TGG | 0.219435 | 3_3:-68011864 | None:intergenic |
AGTTTACTTCTTCACATAAA+TGG | 0.223688 | 3_3:+68014389 | Msa0466900:CDS |
GCTTCTTGGTGATCCTGATT+TGG | 0.254490 | 3_3:+68012151 | Msa0466900:CDS |
CTTCTTGGTGATCCTGATTT+GGG | 0.261549 | 3_3:+68012152 | Msa0466900:CDS |
TGCCTCCCTGCTCTGATTCC+CGG | 0.270037 | 3_3:-68013924 | None:intergenic |
TCAAGACGAACCTCGTTTAC+AGG | 0.275730 | 3_3:+68011275 | Msa0466900:CDS |
GATTTGGGAGATTTCTTTGA+TGG | 0.299751 | 3_3:+68012167 | Msa0466900:CDS |
CATATCTGCCATTAGGAATT+CGG | 0.300492 | 3_3:-68016489 | None:intergenic |
TGTAAAGAATGGGATATATT+CGG | 0.302175 | 3_3:-68014626 | None:intergenic |
TGACAATGGAACATCTAAAA+TGG | 0.304206 | 3_3:-68014076 | None:intergenic |
CAGGCTGCTTATTATTTGTA+TGG | 0.322115 | 3_3:-68012622 | None:intergenic |
AATGCAATAGATGATAGTTT+TGG | 0.322409 | 3_3:+68011096 | Msa0466900:CDS |
GGTTCGCATATTTATGATTA+CGG | 0.330430 | 3_3:+68016416 | Msa0466900:CDS |
ATCATTACAAATGGATTGTA+TGG | 0.332897 | 3_3:+68013559 | Msa0466900:CDS |
TTACCTTTCTTTGTAAAGAA+TGG | 0.343658 | 3_3:-68014637 | None:intergenic |
TGATACCTTGAGGTTGAAAA+AGG | 0.344369 | 3_3:-68010966 | None:intergenic |
TTCTTGTTATACAAGGGTTT+CGG | 0.353305 | 3_3:-68012479 | None:intergenic |
GCAGGTTTATGCGGCTGGAA+TGG | 0.353377 | 3_3:+68014243 | Msa0466900:CDS |
AAAACCTCAAGGGGTGAAAC+TGG | 0.358217 | 3_3:-68014267 | None:intergenic |
TGTCACCTGTCTGGCTGTAT+TGG | 0.358302 | 3_3:-68013091 | None:intergenic |
ATCCCATTCTTTACAAAGAA+AGG | 0.360000 | 3_3:+68014634 | Msa0466900:CDS |
GTCACCAGAGGTAGAGATAT+TGG | 0.362686 | 3_3:-68012708 | None:intergenic |
AAAATTGTGCAACCAGATAT+TGG | 0.364051 | 3_3:+68011378 | Msa0466900:CDS |
AAACGCGCTAGGAGGCTTCT+TGG | 0.367921 | 3_3:+68012137 | Msa0466900:CDS |
TAAAGTTGCTGGTCCACCTT+TGG | 0.369700 | 3_3:+68014545 | Msa0466900:CDS |
TACCTTTCTTTGTAAAGAAT+GGG | 0.373115 | 3_3:-68014636 | None:intergenic |
GGGTTTAACTAAGCAAATTA+GGG | 0.377671 | 3_3:-68010726 | None:intergenic |
TTGGATAGTGAAATGGATAT+CGG | 0.378756 | 3_3:-68012900 | None:intergenic |
GAATATTACTAACACCAGTT+TGG | 0.382112 | 3_3:-68011443 | None:intergenic |
ACGACCTCCCACTGGCAGTT+TGG | 0.385339 | 3_3:-68012091 | None:intergenic |
GGAAAAGACCATAAAGCATT+TGG | 0.385905 | 3_3:+68017969 | Msa0466900:CDS |
CAAATGGATTGTATGGAAAC+TGG | 0.386415 | 3_3:+68013566 | Msa0466900:CDS |
CACTTCATTCTTGTTATACA+AGG | 0.388000 | 3_3:-68012486 | None:intergenic |
CTGCTCTGATTCCCGGTTTG+TGG | 0.390136 | 3_3:-68013917 | None:intergenic |
GTCACCTGTCTGGCTGTATT+GGG | 0.390519 | 3_3:-68013090 | None:intergenic |
CGGTAATTGTTATCGGCGTC+GGG | 0.391361 | 3_3:-68010823 | None:intergenic |
TTGCCACCGGTAATTGTTAT+CGG | 0.392866 | 3_3:-68010830 | None:intergenic |
CCACTACGACTACCAATATC+TGG | 0.393557 | 3_3:-68011390 | None:intergenic |
ATGGACTGTCTTAACGGTAT+TGG | 0.396758 | 3_3:-68012603 | None:intergenic |
ATTTGTATGGACTGTCTTAA+CGG | 0.397845 | 3_3:-68012609 | None:intergenic |
TGTTGTAGATAATATTGTTT+CGG | 0.407964 | 3_3:+68016373 | Msa0466900:CDS |
CATGGAAGGAAGGGGAGGGG+TGG | 0.408337 | 3_3:-68010911 | None:intergenic |
CTTGTGCAGATCTGGGGAGC+AGG | 0.412599 | 3_3:+68014225 | Msa0466900:intron |
GAATATTACTAACAACAGAT+TGG | 0.415489 | 3_3:-68011659 | None:intergenic |
GAATATTACTAACAACAGAT+TGG | 0.415489 | 3_3:-68011875 | None:intergenic |
TCAAAGAAATCTCCCAAATC+AGG | 0.416428 | 3_3:-68012164 | None:intergenic |
AATTCCTTGATGTGCATCCT+TGG | 0.419461 | 3_3:-68012919 | None:intergenic |
TGTTTGTAGGACAGAAGCTT+CGG | 0.420765 | 3_3:+68014121 | Msa0466900:CDS |
GTAAAGAATGGGATATATTC+GGG | 0.420871 | 3_3:-68014625 | None:intergenic |
CCGGAGTCATATCTGCCATT+AGG | 0.422638 | 3_3:-68016496 | None:intergenic |
CTCCGTGCTGTGTCAATAGA+TGG | 0.427383 | 3_3:-68013185 | None:intergenic |
TTATACAAGGGTTTCGGTCC+AGG | 0.427521 | 3_3:-68012473 | None:intergenic |
AATAATAAGCAGCCTGCTAG+TGG | 0.430845 | 3_3:+68012629 | Msa0466900:CDS |
CAGGTTTATGCGGCTGGAAT+GGG | 0.431824 | 3_3:+68014244 | Msa0466900:CDS |
GGGTCTTGAATCATTACAAA+TGG | 0.432801 | 3_3:+68013550 | Msa0466900:CDS |
AGCTTCGCAACGAAGGTAAT+GGG | 0.433487 | 3_3:+68012381 | Msa0466900:CDS |
TAATCGACAGGTAAAGTTGC+TGG | 0.434418 | 3_3:+68014534 | Msa0466900:intron |
TTGTCAAAGCAACTGGCTGC+TGG | 0.435548 | 3_3:+68014093 | Msa0466900:CDS |
CGGTTTAGTACCTCAAACTT+TGG | 0.436809 | 3_3:+68014593 | Msa0466900:CDS |
CCGACGCCGATAACAATTAC+CGG | 0.438369 | 3_3:+68010824 | Msa0466900:CDS |
ACCATTGGGCAGGGCATTGG+TGG | 0.442677 | 3_3:+68012574 | Msa0466900:CDS |
CACAAACCGGGAATCAGAGC+AGG | 0.445691 | 3_3:+68013918 | Msa0466900:CDS |
TGCTATCCAGCTAGGTGTGC+TGG | 0.450035 | 3_3:+68013603 | Msa0466900:CDS |
GCATTATCTGAGCCACAAAC+CGG | 0.451413 | 3_3:+68013905 | Msa0466900:CDS |
TGTTCCATTGTCAAAGCAAC+TGG | 0.452238 | 3_3:+68014086 | Msa0466900:CDS |
AAAACCATTGGGCAGGGCAT+TGG | 0.452394 | 3_3:+68012571 | Msa0466900:CDS |
AAGCTTCGCAACGAAGGTAA+TGG | 0.453729 | 3_3:+68012380 | Msa0466900:CDS |
TGGAACATATAGAGCTCATT+GGG | 0.454267 | 3_3:+68014409 | Msa0466900:CDS |
ATGGAACATATAGAGCTCAT+TGG | 0.457747 | 3_3:+68014408 | Msa0466900:CDS |
TTAGTACCTCAAACTTTGGC+AGG | 0.459938 | 3_3:+68014597 | Msa0466900:CDS |
GGGGTGGGAATAGAAGTAGG+AGG | 0.461215 | 3_3:-68010895 | None:intergenic |
TTTGCAGCCTTCGAAACAAA+TGG | 0.462337 | 3_3:+68012346 | Msa0466900:CDS |
GAGTATCAGAAGGAAATAAC+TGG | 0.466519 | 3_3:+68016395 | Msa0466900:CDS |
GTAATTCCTGCCAAAGTTTG+AGG | 0.467704 | 3_3:-68014603 | None:intergenic |
TTTAGTTGGTAGGTTGAACA+TGG | 0.468541 | 3_3:+68011572 | Msa0466900:CDS |
TTTAGTTGGTAGGTTGAACA+TGG | 0.468541 | 3_3:+68011788 | Msa0466900:CDS |
GGTGGGAATAGAAGTAGGAG+GGG | 0.468575 | 3_3:-68010893 | None:intergenic |
ATGGAAGGAAGGGGAGGGGT+GGG | 0.469291 | 3_3:-68010910 | None:intergenic |
GGGGAGCAGGTTTATGCGGC+TGG | 0.469394 | 3_3:+68014238 | Msa0466900:CDS |
TGCATCCTTGGATAGTGAAA+TGG | 0.470058 | 3_3:-68012907 | None:intergenic |
ATTACCTGATGTCACCTGTC+TGG | 0.470613 | 3_3:-68013100 | None:intergenic |
GCTGCTGGAAGATTGTTTGT+AGG | 0.471023 | 3_3:+68014108 | Msa0466900:CDS |
ATATCTGCCATTAGGAATTC+GGG | 0.471026 | 3_3:-68016488 | None:intergenic |
GAGGATGGAGAGTAAAATGA+TGG | 0.477162 | 3_3:+68014797 | Msa0466900:CDS |
ATTAAATTCCAAACTGCCAG+TGG | 0.479529 | 3_3:+68012083 | Msa0466900:CDS |
CCGGTAATTGTTATCGGCGT+CGG | 0.480036 | 3_3:-68010824 | None:intergenic |
TTAGTTGGTACGTTGAAGAA+TGG | 0.482066 | 3_3:+68012005 | Msa0466900:CDS |
GTTTGTAGGACAGAAGCTTC+GGG | 0.483618 | 3_3:+68014122 | Msa0466900:CDS |
GATTTGGCTCAATTATCCTC+TGG | 0.484666 | 3_3:+68012847 | Msa0466900:intron |
CACGTGGAAAACCATTGGGC+AGG | 0.486395 | 3_3:+68012564 | Msa0466900:CDS |
TCATTTCAAAGTCCTTTAGT+TGG | 0.487907 | 3_3:+68011990 | Msa0466900:CDS |
TGCAGAACCCGAATTCCTAA+TGG | 0.487970 | 3_3:+68016481 | Msa0466900:CDS |
AGCAGCCTGCTAGTGGGAAA+AGG | 0.487997 | 3_3:+68012636 | Msa0466900:CDS |
GCTCATTGGGCAGATCGGTT+AGG | 0.491199 | 3_3:+68014422 | Msa0466900:CDS |
AAAGTTACTATTTCTTCTAA+CGG | 0.491582 | 3_3:+68011156 | Msa0466900:CDS |
TTTGATTTGATTTGATTTCG+AGG | 0.494456 | 3_3:-68010747 | None:intergenic |
GCTCCGATAAAATTCCAAAC+TGG | 0.497788 | 3_3:+68011429 | Msa0466900:CDS |
GGAGGGGTGGGAATAGAAGT+AGG | 0.501265 | 3_3:-68010898 | None:intergenic |
GAAAATTCCATTTGTTTCGA+AGG | 0.503805 | 3_3:-68012353 | None:intergenic |
TTGATTTGATTTGATTTCGA+GGG | 0.504270 | 3_3:-68010746 | None:intergenic |
GGATTCACGTGGAAAACCAT+TGG | 0.504425 | 3_3:+68012559 | Msa0466900:CDS |
GTGTCATTTGATGTACCAAA+GGG | 0.504965 | 3_3:-68012280 | None:intergenic |
TGCTTCTGGACTCAAAAGAA+AGG | 0.512413 | 3_3:+68012870 | Msa0466900:CDS |
TTAAATTTCTTAGCATTCTG+AGG | 0.512782 | 3_3:-68011243 | None:intergenic |
TTAAAAGTTGAATTAACTGA+TGG | 0.514214 | 3_3:+68013947 | Msa0466900:CDS |
TTCTCCCAATACAGCCAGAC+AGG | 0.517074 | 3_3:+68013086 | Msa0466900:CDS |
TTGGGAGATTTCTTTGATGG+TGG | 0.517505 | 3_3:+68012170 | Msa0466900:CDS |
ACAGCCAGACAGGTGACATC+AGG | 0.518455 | 3_3:+68013096 | Msa0466900:CDS |
GCTAGTGGGAAAAGGAGAAT+AGG | 0.518525 | 3_3:+68012644 | Msa0466900:CDS |
GGCTAAGATATATAAGATGC+TGG | 0.518921 | 3_3:+68016451 | Msa0466900:CDS |
CAGGTGACATCAGGTAATGC+AGG | 0.519570 | 3_3:+68013105 | Msa0466900:CDS |
ACTTTGAAACGACGCAGCAC+TGG | 0.520218 | 3_3:-68011319 | None:intergenic |
ACCATCAAGAAAATTCTTGA+GGG | 0.521881 | 3_3:+68013809 | Msa0466900:CDS |
CTACGCACTCACTCTTCTCC+CGG | 0.522137 | 3_3:-68010653 | None:intergenic |
GGGTGGGAATAGAAGTAGGA+GGG | 0.522833 | 3_3:-68010894 | None:intergenic |
GCAAAAGAACTAAGTTGCTC+CGG | 0.523062 | 3_3:-68016515 | None:intergenic |
ATTTCCAATATCTCTACCTC+TGG | 0.523225 | 3_3:+68012704 | Msa0466900:CDS |
GTGCATAGTGGTAGTGTTAG+TGG | 0.525584 | 3_3:+68011612 | Msa0466900:CDS |
GTGCATAGTGGTAGTGTTAG+TGG | 0.525584 | 3_3:+68011828 | Msa0466900:CDS |
CTATCCATAAGCTGCAAATG+AGG | 0.526428 | 3_3:-68011513 | None:intergenic |
CTATCCATAAGCTGCAAATG+AGG | 0.526428 | 3_3:-68011729 | None:intergenic |
CTATCCATAAGCTGCAAATG+AGG | 0.526428 | 3_3:-68011945 | None:intergenic |
TGGATAGTGAAATGGATATC+GGG | 0.526457 | 3_3:-68012899 | None:intergenic |
GCAGCCAGTTGCTTTGACAA+TGG | 0.526991 | 3_3:-68014090 | None:intergenic |
GTACATGGAAGGAAGGGGAG+GGG | 0.527310 | 3_3:-68010914 | None:intergenic |
CAGAGAGTCATCATTGAAGA+AGG | 0.529558 | 3_3:-68013842 | None:intergenic |
TTTATGCATTTGAAAGCCAA+AGG | 0.530660 | 3_3:-68014561 | None:intergenic |
GATTCACGTGGAAAACCATT+GGG | 0.530690 | 3_3:+68012560 | Msa0466900:CDS |
CTGATCATGTGCTTGACAGT+GGG | 0.531781 | 3_3:+68013882 | Msa0466900:CDS |
AACAGAGGAAGTGATTGTGC+TGG | 0.533610 | 3_3:-68012228 | None:intergenic |
AAGTTGAATTAACTGATGGA+TGG | 0.535731 | 3_3:+68013951 | Msa0466900:CDS |
TTCAAAGTCCTTTAGTTGGT+AGG | 0.535790 | 3_3:+68011562 | Msa0466900:CDS |
TTCAAAGTCCTTTAGTTGGT+AGG | 0.535790 | 3_3:+68011778 | Msa0466900:CDS |
ATTGGTAGTCGTAGTGGTGC+TGG | 0.536017 | 3_3:+68011396 | Msa0466900:CDS |
TGGCTCTGATAGTAATGGTA+TGG | 0.536135 | 3_3:+68013146 | Msa0466900:CDS |
GTGGGAATAGAAGTAGGAGG+GGG | 0.536151 | 3_3:-68010892 | None:intergenic |
TTTGTTTCGAAGGCTGCAAA+GGG | 0.537403 | 3_3:-68012343 | None:intergenic |
TGGGCCAGTTTCACCCCTTG+AGG | 0.537797 | 3_3:+68014263 | Msa0466900:CDS |
CATTACTATCAGAGCCATCA+TGG | 0.538675 | 3_3:-68013140 | None:intergenic |
CATGATGGCTCTGATAGTAA+TGG | 0.539102 | 3_3:+68013141 | Msa0466900:CDS |
CTTGTATGGCGCTAGACGCT+CGG | 0.539469 | 3_3:+68016349 | Msa0466900:intron |
TGATGGAGCTGCACAATCAA+AGG | 0.543075 | 3_3:+68014814 | Msa0466900:CDS |
TCAAATAAGCTTCGCAACGA+AGG | 0.544748 | 3_3:+68012374 | Msa0466900:CDS |
ATTTGTTTCGAAGGCTGCAA+AGG | 0.544759 | 3_3:-68012344 | None:intergenic |
TTCTTCAACGTACCAACTAA+AGG | 0.545451 | 3_3:-68012002 | None:intergenic |
TGTTGTAATATCAGAGAGGA+TGG | 0.546484 | 3_3:+68014782 | Msa0466900:CDS |
TTAGCACCACCACCACTACC+TGG | 0.547242 | 3_3:-68012050 | None:intergenic |
TATGAAAGAGAAGTGAATCA+TGG | 0.547598 | 3_3:+68013776 | Msa0466900:CDS |
TTAGTTAGTAGATCGAAAAG+TGG | 0.547945 | 3_3:+68011345 | Msa0466900:CDS |
GTGCAACCAGGTAGTGGTGG+TGG | 0.549195 | 3_3:+68012044 | Msa0466900:CDS |
AAATTTGTGCAACCAGGTAG+TGG | 0.550143 | 3_3:+68012038 | Msa0466900:CDS |
GAAGATCGTACATGGAAGGA+AGG | 0.551575 | 3_3:-68010921 | None:intergenic |
TATGATTACGGCAATAGCGA+AGG | 0.551854 | 3_3:+68016428 | Msa0466900:CDS |
ATGTTCAACCTACCAACTAA+AGG | 0.553197 | 3_3:-68011570 | None:intergenic |
ATGTTCAACCTACCAACTAA+AGG | 0.553197 | 3_3:-68011786 | None:intergenic |
AAGATCGTACATGGAAGGAA+GGG | 0.555599 | 3_3:-68010920 | None:intergenic |
GTAGAGATATTGGAAATTCG+AGG | 0.556021 | 3_3:-68012698 | None:intergenic |
TCTGATCATGTGCTTGACAG+TGG | 0.559826 | 3_3:+68013881 | Msa0466900:CDS |
TCGTTTCAAAGTCCTTTAGT+TGG | 0.562899 | 3_3:+68011558 | Msa0466900:CDS |
TCGTTTCAAAGTCCTTTAGT+TGG | 0.562899 | 3_3:+68011774 | Msa0466900:CDS |
ATCTGGGGAGCAGGTTTATG+CGG | 0.563462 | 3_3:+68014234 | Msa0466900:CDS |
TGGTAGTGTTAGTGGTGCTA+AGG | 0.563632 | 3_3:+68011620 | Msa0466900:CDS |
TGGTAGTGTTAGTGGTGCTA+AGG | 0.563632 | 3_3:+68011836 | Msa0466900:CDS |
GATATCCATTTCACTATCCA+AGG | 0.565174 | 3_3:+68012902 | Msa0466900:CDS |
TACCATCAAGAAAATTCTTG+AGG | 0.566360 | 3_3:+68013808 | Msa0466900:CDS |
CGTACATGGAAGGAAGGGGA+GGG | 0.566520 | 3_3:-68010915 | None:intergenic |
ATGATTACGGCAATAGCGAA+GGG | 0.568939 | 3_3:+68016429 | Msa0466900:CDS |
TCCACCAATGCCCTGCCCAA+TGG | 0.570333 | 3_3:-68012575 | None:intergenic |
CATAAAAGTAGCAAAGCTCC+TGG | 0.572073 | 3_3:+68012455 | Msa0466900:CDS |
TGCTTGAGGAACTGAAGTAC+AGG | 0.575597 | 3_3:+68013649 | Msa0466900:CDS |
CATTATCTGAGCCACAAACC+GGG | 0.576494 | 3_3:+68013906 | Msa0466900:CDS |
AATTGTTATCGGCGTCGGGG+AGG | 0.578824 | 3_3:-68010819 | None:intergenic |
CTTGTATAACAAGAATGAAG+TGG | 0.581521 | 3_3:+68012487 | Msa0466900:CDS |
ATATTCCTTGTGCAGATCTG+GGG | 0.583597 | 3_3:+68014219 | Msa0466900:intron |
TATTGTTTCGGAGTATCAGA+AGG | 0.586541 | 3_3:+68016385 | Msa0466900:CDS |
AGATCGTACATGGAAGGAAG+GGG | 0.587741 | 3_3:-68010919 | None:intergenic |
TCGTACATGGAAGGAAGGGG+AGG | 0.589194 | 3_3:-68010916 | None:intergenic |
CTATCCAAGGATGCACATCA+AGG | 0.589712 | 3_3:+68012915 | Msa0466900:CDS |
CCAGATATTGGTAGTCGTAG+TGG | 0.590325 | 3_3:+68011390 | Msa0466900:CDS |
GAGAATAAAGTTGTGCATAG+TGG | 0.590470 | 3_3:+68011600 | Msa0466900:CDS |
GAGAATAAAGTTGTGCATAG+TGG | 0.590470 | 3_3:+68011816 | Msa0466900:CDS |
GACTGTATCAAACGTGCTTG+AGG | 0.593902 | 3_3:+68013635 | Msa0466900:CDS |
AATAGATAACGACCTCCCAC+TGG | 0.595561 | 3_3:-68012099 | None:intergenic |
AGTGTCATTTGATGTACCAA+AGG | 0.597531 | 3_3:-68012281 | None:intergenic |
ATAATAAGCAGCCTGCTAGT+GGG | 0.598295 | 3_3:+68012630 | Msa0466900:CDS |
GAGAGTAAATTTGTGCAACC+AGG | 0.600163 | 3_3:+68012032 | Msa0466900:CDS |
CGTCGGAGTTGATTTGCCAC+CGG | 0.600580 | 3_3:-68010843 | None:intergenic |
ATGAGAGATGCTATCCAGCT+AGG | 0.600663 | 3_3:+68013595 | Msa0466900:CDS |
ACGTGGAAAACCATTGGGCA+GGG | 0.603971 | 3_3:+68012565 | Msa0466900:CDS |
TTAGTTGGTAGGTTGAACAT+GGG | 0.606230 | 3_3:+68011573 | Msa0466900:CDS |
TTAGTTGGTAGGTTGAACAT+GGG | 0.606230 | 3_3:+68011789 | Msa0466900:CDS |
AGGAGAAGATCGTACATGGA+AGG | 0.606968 | 3_3:-68010925 | None:intergenic |
ATAGAGCTCATTGGGCAGAT+CGG | 0.606980 | 3_3:+68014417 | Msa0466900:CDS |
GAGAAGTGAATCATGGCCAC+CGG | 0.607775 | 3_3:+68013783 | Msa0466900:CDS |
ATCCATCTATTGACACAGCA+CGG | 0.609149 | 3_3:+68013183 | Msa0466900:CDS |
ATGCATTTGAAAGCCAAAGG+TGG | 0.609685 | 3_3:-68014558 | None:intergenic |
GTGATGCGTTGAAACGCGCT+AGG | 0.611592 | 3_3:+68012126 | Msa0466900:CDS |
CCTTATATTAGGTTAAGCAG+TGG | 0.612044 | 3_3:+68014753 | Msa0466900:intron |
ACTTCATTCTTGTTATACAA+GGG | 0.612276 | 3_3:-68012485 | None:intergenic |
ATGAAGGAGAAGATCGTACA+TGG | 0.614402 | 3_3:-68010929 | None:intergenic |
GGCTCTGATAGTAATGGTAT+GGG | 0.615727 | 3_3:+68013147 | Msa0466900:CDS |
TTTGAGTCCAGAAGCACCAG+AGG | 0.625357 | 3_3:-68012863 | None:intergenic |
CATCAAGAAAATTCTTGAGG+GGG | 0.625750 | 3_3:+68013811 | Msa0466900:CDS |
ATGCGTTGAAACGCGCTAGG+AGG | 0.627260 | 3_3:+68012129 | Msa0466900:CDS |
GGTGTGAGGCGGAAGCATGA+AGG | 0.627960 | 3_3:-68010945 | None:intergenic |
AATAACATTTGAAGTGTCGT+CGG | 0.629896 | 3_3:-68010860 | None:intergenic |
GGAGCGTACATATTCCATGA+TGG | 0.630123 | 3_3:+68013126 | Msa0466900:CDS |
CCATCAAGAAAATTCTTGAG+GGG | 0.633200 | 3_3:+68013810 | Msa0466900:CDS |
CTATCTATTACCTGTAAACG+AGG | 0.635769 | 3_3:-68011285 | None:intergenic |
CCTAATGGCAGATATGACTC+CGG | 0.636920 | 3_3:+68016496 | Msa0466900:CDS |
ACAAACCGGGAATCAGAGCA+GGG | 0.642447 | 3_3:+68013919 | Msa0466900:CDS |
TCTTCAAGAATGGATTCACG+TGG | 0.644634 | 3_3:+68012548 | Msa0466900:CDS |
TGATCATGTGCTTGACAGTG+GGG | 0.648137 | 3_3:+68013883 | Msa0466900:CDS |
ACTCTCACTTCTTTCAACAG+AGG | 0.651704 | 3_3:-68012243 | None:intergenic |
TTGAACATCTTGGTCACCAG+AGG | 0.654410 | 3_3:-68012720 | None:intergenic |
AATTCCAAACTGCCAGTGGG+AGG | 0.664894 | 3_3:+68012087 | Msa0466900:CDS |
TTAAATTCCAAACTGCCAGT+GGG | 0.666155 | 3_3:+68012084 | Msa0466900:CDS |
TGATTACGGCAATAGCGAAG+GGG | 0.679687 | 3_3:+68016430 | Msa0466900:CDS |
GTTGTGAATGAAAGTGATTG+TGG | 0.680825 | 3_3:+68012431 | Msa0466900:CDS |
GGTAATTGTTATCGGCGTCG+GGG | 0.682486 | 3_3:-68010822 | None:intergenic |
GGATTGCATGAAGAAACTGT+TGG | 0.692759 | 3_3:+68011204 | Msa0466900:CDS |
TTTGTGCAACCAGGTAGTGG+TGG | 0.698341 | 3_3:+68012041 | Msa0466900:CDS |
TAAAGGACTTTGAAATGACG+CGG | 0.698771 | 3_3:-68011985 | None:intergenic |
GAATCGAAGAAATGTCAACA+TGG | 0.699408 | 3_3:+68010791 | Msa0466900:exon |
ACGCCGATAACAATTACCGG+TGG | 0.728353 | 3_3:+68010827 | Msa0466900:CDS |
AATCTGTTGTAATATCAGAG+AGG | 0.730566 | 3_3:+68014778 | Msa0466900:CDS |
TGTCATTTGATGTACCAAAG+GGG | 0.741422 | 3_3:-68012279 | None:intergenic |
AACCGGGAATCAGAGCAGGG+AGG | 0.760357 | 3_3:+68013922 | Msa0466900:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAGAAAAATGAAATAATA+AGG | - | chr3_3:68011006-68011025 | None:intergenic | 10.0% |
!! | AAATATAGAAGAAAAAAAAA+TGG | - | chr3_3:68015897-68015916 | None:intergenic | 10.0% |
!!! | ATTTTTATCTCATATAAATT+CGG | - | chr3_3:68016021-68016040 | None:intergenic | 10.0% |
!! | AATTTATATGAGATAAAAAT+AGG | + | chr3_3:68016021-68016040 | Msa0466900:intron | 10.0% |
!! | ATAATTATTCAATATTAATG+AGG | - | chr3_3:68016053-68016072 | None:intergenic | 10.0% |
!! | TTGAATAATTATATAATTGA+TGG | + | chr3_3:68016061-68016080 | Msa0466900:intron | 10.0% |
!! | ATTTAAACATTAAGAAAATT+TGG | + | chr3_3:68017245-68017264 | Msa0466900:intron | 10.0% |
!! | TGTGGTTAAATTTAATAATT+TGG | + | chr3_3:68013415-68013434 | Msa0466900:intron | 15.0% |
!!! | AAAAGCCAATTAAATATTTT+AGG | + | chr3_3:68013719-68013738 | Msa0466900:intron | 15.0% |
!!! | AATATCATTGTTAGTTTAAA+AGG | - | chr3_3:68013745-68013764 | None:intergenic | 15.0% |
!!! | TCTGAAATTTATTTTTAGTT+TGG | - | chr3_3:68015591-68015610 | None:intergenic | 15.0% |
!!! | TTTTTATCTCATATAAATTC+GGG | - | chr3_3:68016020-68016039 | None:intergenic | 15.0% |
!! | ACAAACAAAATTCATATTAA+CGG | - | chr3_3:68016314-68016333 | None:intergenic | 15.0% |
!! | AATATAACTCACATTTAATT+TGG | - | chr3_3:68016552-68016571 | None:intergenic | 15.0% |
!! | TATTCTTATAGACTTAAAAA+TGG | + | chr3_3:68016746-68016765 | Msa0466900:intron | 15.0% |
!!! | TTTTAAATCGTATTCAATTT+TGG | + | chr3_3:68016785-68016804 | Msa0466900:intron | 15.0% |
!! | AACAACAATATTATAACTAA+TGG | - | chr3_3:68017157-68017176 | None:intergenic | 15.0% |
!!! | TGTGTTATTTATGAATATAT+GGG | - | chr3_3:68017474-68017493 | None:intergenic | 15.0% |
!!! | TTGTGTTATTTATGAATATA+TGG | - | chr3_3:68017475-68017494 | None:intergenic | 15.0% |
!!! | TTTTATTACAAATTACAGAT+AGG | + | chr3_3:68017948-68017967 | Msa0466900:intron | 15.0% |
!!! | AAGTGTATTTATTTTTGTAG+AGG | + | chr3_3:68011068-68011087 | Msa0466900:intron | 20.0% |
!!! | AAAGTTACTATTTCTTCTAA+CGG | + | chr3_3:68011156-68011175 | Msa0466900:CDS | 20.0% |
!! | ATAAAAAGTTCTTCATTGAA+TGG | + | chr3_3:68012521-68012540 | Msa0466900:CDS | 20.0% |
!! | TAGAAAAATATTGAACATCT+TGG | - | chr3_3:68012733-68012752 | None:intergenic | 20.0% |
!!! | GATGTTCAATATTTTTCTAA+TGG | + | chr3_3:68012734-68012753 | Msa0466900:CDS | 20.0% |
!!! | TACATTTCTTTCACTTTTAT+TGG | + | chr3_3:68012781-68012800 | Msa0466900:intron | 20.0% |
!!! | TTTTTAATGTATATGATGCA+AGG | + | chr3_3:68013307-68013326 | Msa0466900:intron | 20.0% |
!! | ATTATTAAATTTAACCACAG+AGG | - | chr3_3:68013414-68013433 | None:intergenic | 20.0% |
!! | GGTTAAATTTAATAATTTGG+CGG | + | chr3_3:68013418-68013437 | Msa0466900:intron | 20.0% |
!!! | TTGCTTAAACATCATATTTT+AGG | + | chr3_3:68013679-68013698 | Msa0466900:intron | 20.0% |
!! | AAAGGCCTAAAATATTTAAT+TGG | - | chr3_3:68013727-68013746 | None:intergenic | 20.0% |
!! | TTAAAAGTTGAATTAACTGA+TGG | + | chr3_3:68013947-68013966 | Msa0466900:CDS | 20.0% |
!! | CTATGATTTCAAAATATAAG+AGG | + | chr3_3:68014004-68014023 | Msa0466900:intron | 20.0% |
!!! | TCAAATTCTGCTATATTTTT+AGG | + | chr3_3:68014352-68014371 | Msa0466900:intron | 20.0% |
!! | TTCAAATGCATAAAAAGAAA+TGG | + | chr3_3:68014570-68014589 | Msa0466900:CDS | 20.0% |
!!! | GAAAATAGTTCTTAATTTTC+TGG | - | chr3_3:68014734-68014753 | None:intergenic | 20.0% |
!!! | AGAACTATTTTCCTTATATT+AGG | + | chr3_3:68014742-68014761 | Msa0466900:intron | 20.0% |
!! | GTATTAACATTAAAATAAGC+AGG | - | chr3_3:68015320-68015339 | None:intergenic | 20.0% |
!! | TTATAAATATTCCAGAAGAA+AGG | + | chr3_3:68015542-68015561 | Msa0466900:intron | 20.0% |
!!! | TGGTTTTGTATATTTATGAT+AGG | + | chr3_3:68015703-68015722 | Msa0466900:intron | 20.0% |
!! | ACTTAATAAGTCATTTAGTT+AGG | + | chr3_3:68015759-68015778 | Msa0466900:intron | 20.0% |
!! | CTTAATAAGTCATTTAGTTA+GGG | + | chr3_3:68015760-68015779 | Msa0466900:intron | 20.0% |
!! | GAAAAAAAAATGGTGTTTAT+TGG | - | chr3_3:68015887-68015906 | None:intergenic | 20.0% |
!! | ATATGAGATAAAAATAGGAA+AGG | + | chr3_3:68016026-68016045 | Msa0466900:intron | 20.0% |
!!! | TATATAATTGATGGCTATAT+AGG | + | chr3_3:68016070-68016089 | Msa0466900:intron | 20.0% |
!!! | ATATAATTGATGGCTATATA+GGG | + | chr3_3:68016071-68016090 | Msa0466900:intron | 20.0% |
!! | TGTTGTAGATAATATTGTTT+CGG | + | chr3_3:68016373-68016392 | Msa0466900:CDS | 20.0% |
!! | TATATGTAGAAAGATACTTA+TGG | + | chr3_3:68016590-68016609 | Msa0466900:intron | 20.0% |
!! | TAAAAATGGTAACAGTTTAT+CGG | + | chr3_3:68016760-68016779 | Msa0466900:intron | 20.0% |
!!! | GTGTTATTTATGAATATATG+GGG | - | chr3_3:68017473-68017492 | None:intergenic | 20.0% |
!! | CAAAAAACTATGTTCAAAAT+TGG | + | chr3_3:68017492-68017511 | Msa0466900:intron | 20.0% |
!!! | GTTTTTGACATAAAATCATA+TGG | + | chr3_3:68017685-68017704 | Msa0466900:intron | 20.0% |
!!! | AATTAGGGATTCGATTTTTT+GGG | - | chr3_3:68010714-68010733 | None:intergenic | 25.0% |
!!! | AAATTAGGGATTCGATTTTT+TGG | - | chr3_3:68010715-68010734 | None:intergenic | 25.0% |
!!! | TTGATTTGATTTGATTTCGA+GGG | - | chr3_3:68010749-68010768 | None:intergenic | 25.0% |
!!! | TTTGATTTGATTTGATTTCG+AGG | - | chr3_3:68010750-68010769 | None:intergenic | 25.0% |
!! | AATGCAATAGATGATAGTTT+TGG | + | chr3_3:68011096-68011115 | Msa0466900:CDS | 25.0% |
! | TTAAATTTCTTAGCATTCTG+AGG | - | chr3_3:68011246-68011265 | None:intergenic | 25.0% |
! | GAATATTACTAACAACAGAT+TGG | - | chr3_3:68011662-68011681 | None:intergenic | 25.0% |
! | GAATATTACTAACAACAGAT+TGG | - | chr3_3:68011662-68011681 | None:intergenic | 25.0% |
!! | AAACTTTTTGTCATGTGATT+GGG | - | chr3_3:68012317-68012336 | None:intergenic | 25.0% |
!! | ACTTCATTCTTGTTATACAA+GGG | - | chr3_3:68012488-68012507 | None:intergenic | 25.0% |
!! | TATTTTTCTAATGGTATGCA+TGG | + | chr3_3:68012743-68012762 | Msa0466900:intron | 25.0% |
! | TATGTGTGATTCTTAAGATT+TGG | + | chr3_3:68012831-68012850 | Msa0466900:intron | 25.0% |
! | ATTGTTATGTGAATGATAAG+AGG | + | chr3_3:68013387-68013406 | Msa0466900:intron | 25.0% |
!!! | ATCATTACAAATGGATTGTA+TGG | + | chr3_3:68013559-68013578 | Msa0466900:CDS | 25.0% |
! | GTAAGATAGACAATAAAAAC+AGG | - | chr3_3:68014159-68014178 | None:intergenic | 25.0% |
! | ATTGTCTATCTTACTTAGTA+CGG | + | chr3_3:68014165-68014184 | Msa0466900:intron | 25.0% |
! | ATTATGATTGAGTATTTGTG+TGG | + | chr3_3:68014303-68014322 | Msa0466900:intron | 25.0% |
! | AGTTTACTTCTTCACATAAA+TGG | + | chr3_3:68014389-68014408 | Msa0466900:CDS | 25.0% |
! | AAATGCATAAAAAGAAATGG+CGG | + | chr3_3:68014573-68014592 | Msa0466900:CDS | 25.0% |
! | TGTAAAGAATGGGATATATT+CGG | - | chr3_3:68014629-68014648 | None:intergenic | 25.0% |
! | TACCTTTCTTTGTAAAGAAT+GGG | - | chr3_3:68014639-68014658 | None:intergenic | 25.0% |
! | TTACCTTTCTTTGTAAAGAA+TGG | - | chr3_3:68014640-68014659 | None:intergenic | 25.0% |
! | ACTTCTTATATTCATAAGCT+GGG | + | chr3_3:68014839-68014858 | Msa0466900:intron | 25.0% |
! | AATATTCACATCAGACAAAA+AGG | - | chr3_3:68014896-68014915 | None:intergenic | 25.0% |
! | AGACTATATTGCAAATTATC+TGG | + | chr3_3:68014981-68015000 | Msa0466900:intron | 25.0% |
! | TTAGATTCTGCAGAAAATTA+TGG | + | chr3_3:68015053-68015072 | Msa0466900:intron | 25.0% |
! | AGTACTTGTTCATAGAAATA+AGG | - | chr3_3:68015200-68015219 | None:intergenic | 25.0% |
!! | TATTTCTATGAACAAGTACT+TGG | + | chr3_3:68015200-68015219 | Msa0466900:intron | 25.0% |
! | TCAACATCATCATCTTTATA+AGG | + | chr3_3:68015277-68015296 | Msa0466900:intron | 25.0% |
! | TCATCATCTTTATAAGGTAT+TGG | + | chr3_3:68015283-68015302 | Msa0466900:intron | 25.0% |
!! | CATCATCTTTATAAGGTATT+GGG | + | chr3_3:68015284-68015303 | Msa0466900:intron | 25.0% |
! | ATGAATAGTATCATAATCCT+TGG | - | chr3_3:68015386-68015405 | None:intergenic | 25.0% |
! | AGGATTATGATACTATTCAT+TGG | + | chr3_3:68015386-68015405 | Msa0466900:intron | 25.0% |
! | GGATTATGATACTATTCATT+GGG | + | chr3_3:68015387-68015406 | Msa0466900:intron | 25.0% |
! | AATTAGCTAACAATAAGAAC+AGG | + | chr3_3:68015433-68015452 | Msa0466900:intron | 25.0% |
! | AAAATTTGACCAAAGTCAAA+AGG | + | chr3_3:68015493-68015512 | Msa0466900:intron | 25.0% |
! | AAATTTGACCAAAGTCAAAA+GGG | + | chr3_3:68015494-68015513 | Msa0466900:intron | 25.0% |
! | CAGAAACTATAAATAGGATT+TGG | - | chr3_3:68015670-68015689 | None:intergenic | 25.0% |
! | AATATACAAAACCATCTGTA+AGG | - | chr3_3:68015697-68015716 | None:intergenic | 25.0% |
!! | ATTTTGTTCTATTTCCTATC+AGG | + | chr3_3:68015913-68015932 | Msa0466900:intron | 25.0% |
!!! | TAAAAACCTGATCATTTTTC+GGG | - | chr3_3:68016264-68016283 | None:intergenic | 25.0% |
!!! | GTAAAAACCTGATCATTTTT+CGG | - | chr3_3:68016265-68016284 | None:intergenic | 25.0% |
! | NNNNNNNNNNTGCCTGAAGA+TGG | - | chr3_3:68016624-68016643 | None:intergenic | 25.0% |
!!! | CAATTTTGGTATTTAGAATG+TGG | + | chr3_3:68016799-68016818 | Msa0466900:intron | 25.0% |
!! | ATATTGTTTTCCCTATTAGT+AGG | - | chr3_3:68017376-68017395 | None:intergenic | 25.0% |
! | CAGATGCATAAAAATATGAT+AGG | + | chr3_3:68017413-68017432 | Msa0466900:intron | 25.0% |
! | ACAACATGATTCTTTACAAA+GGG | - | chr3_3:68017616-68017635 | None:intergenic | 25.0% |
! | TACAACATGATTCTTTACAA+AGG | - | chr3_3:68017617-68017636 | None:intergenic | 25.0% |
!!! | TTATTTTGTTAGCTATCTCA+TGG | + | chr3_3:68017717-68017736 | Msa0466900:intron | 25.0% |
! | CTGAATTCTGAATATCAATA+CGG | - | chr3_3:68017796-68017815 | None:intergenic | 25.0% |
! | TTATTAAACTTGTAGCTATG+TGG | + | chr3_3:68017854-68017873 | Msa0466900:intron | 25.0% |
GGGTTTAACTAAGCAAATTA+GGG | - | chr3_3:68010729-68010748 | None:intergenic | 30.0% | |
AGGGTTTAACTAAGCAAATT+AGG | - | chr3_3:68010730-68010749 | None:intergenic | 30.0% | |
!! | AATAACATTTGAAGTGTCGT+CGG | - | chr3_3:68010863-68010882 | None:intergenic | 30.0% |
TGAATGAAAATGATACCTTG+AGG | - | chr3_3:68010979-68010998 | None:intergenic | 30.0% | |
! | CTTTTCGATCTACTAACTAA+AGG | - | chr3_3:68011345-68011364 | None:intergenic | 30.0% |
TTAGTTAGTAGATCGAAAAG+TGG | + | chr3_3:68011345-68011364 | Msa0466900:CDS | 30.0% | |
AAAATTGTGCAACCAGATAT+TGG | + | chr3_3:68011378-68011397 | Msa0466900:CDS | 30.0% | |
!! | ACACCAGTTTGGAATTTTAT+CGG | - | chr3_3:68011435-68011454 | None:intergenic | 30.0% |
GAATATTACTAACACCAGTT+TGG | - | chr3_3:68011446-68011465 | None:intergenic | 30.0% | |
AAAAAAACTAGCATTCTGAG+GGG | - | chr3_3:68011472-68011491 | None:intergenic | 30.0% | |
CAAAAAAACTAGCATTCTGA+GGG | - | chr3_3:68011473-68011492 | None:intergenic | 30.0% | |
TCAAAAAAACTAGCATTCTG+AGG | - | chr3_3:68011474-68011493 | None:intergenic | 30.0% | |
ACAACAGATTGGAACTTAAT+TGG | - | chr3_3:68011651-68011670 | None:intergenic | 30.0% | |
ACAACAGATTGGAACTTAAT+TGG | - | chr3_3:68011651-68011670 | None:intergenic | 30.0% | |
TCATTTCAAAGTCCTTTAGT+TGG | + | chr3_3:68011990-68012009 | Msa0466900:CDS | 30.0% | |
TAAAAATACTCATACCCCTT+TGG | + | chr3_3:68012265-68012284 | Msa0466900:CDS | 30.0% | |
! | GAAACTTTTTGTCATGTGAT+TGG | - | chr3_3:68012318-68012337 | None:intergenic | 30.0% |
GAAAATTCCATTTGTTTCGA+AGG | - | chr3_3:68012356-68012375 | None:intergenic | 30.0% | |
! | TTCTTGTTATACAAGGGTTT+CGG | - | chr3_3:68012482-68012501 | None:intergenic | 30.0% |
! | CACTTCATTCTTGTTATACA+AGG | - | chr3_3:68012489-68012508 | None:intergenic | 30.0% |
CTTGTATAACAAGAATGAAG+TGG | + | chr3_3:68012487-68012506 | Msa0466900:CDS | 30.0% | |
! | GAATGGTTTTTCTTCAAGAA+TGG | + | chr3_3:68012538-68012557 | Msa0466900:CDS | 30.0% |
! | ATTTGTATGGACTGTCTTAA+CGG | - | chr3_3:68012612-68012631 | None:intergenic | 30.0% |
TTGGATAGTGAAATGGATAT+CGG | - | chr3_3:68012903-68012922 | None:intergenic | 30.0% | |
! | TGCTGCAACAAATTTCATTT+TGG | - | chr3_3:68013066-68013085 | None:intergenic | 30.0% |
TTTAATAATTTGGCGGAGTT+TGG | + | chr3_3:68013425-68013444 | Msa0466900:intron | 30.0% | |
!!! | TTCTTTTGCCTAGTCTTAAT+TGG | + | chr3_3:68013492-68013511 | Msa0466900:intron | 30.0% |
TTCACTTCTCTTTCATATCT+AGG | - | chr3_3:68013773-68013792 | None:intergenic | 30.0% | |
TATGAAAGAGAAGTGAATCA+TGG | + | chr3_3:68013776-68013795 | Msa0466900:CDS | 30.0% | |
TACCATCAAGAAAATTCTTG+AGG | + | chr3_3:68013808-68013827 | Msa0466900:CDS | 30.0% | |
ACCATCAAGAAAATTCTTGA+GGG | + | chr3_3:68013809-68013828 | Msa0466900:CDS | 30.0% | |
AAGTTGAATTAACTGATGGA+TGG | + | chr3_3:68013951-68013970 | Msa0466900:CDS | 30.0% | |
AGGAAAATACTTTATGTCCA+GGG | - | chr3_3:68014032-68014051 | None:intergenic | 30.0% | |
AAGGAAAATACTTTATGTCC+AGG | - | chr3_3:68014033-68014052 | None:intergenic | 30.0% | |
! | AAGTATTTTCCTTTTTCTGC+AGG | + | chr3_3:68014040-68014059 | Msa0466900:intron | 30.0% |
TATAGAATACCTGCAGAAAA+AGG | - | chr3_3:68014052-68014071 | None:intergenic | 30.0% | |
TGACAATGGAACATCTAAAA+TGG | - | chr3_3:68014079-68014098 | None:intergenic | 30.0% | |
!!! | TGTAAGCATCTTTTAGTTTG+TGG | + | chr3_3:68014449-68014468 | Msa0466900:intron | 30.0% |
!!! | GGATGTCATTCTTTTTAAGT+TGG | + | chr3_3:68014470-68014489 | Msa0466900:intron | 30.0% |
TTTATGCATTTGAAAGCCAA+AGG | - | chr3_3:68014564-68014583 | None:intergenic | 30.0% | |
GTAAAGAATGGGATATATTC+GGG | - | chr3_3:68014628-68014647 | None:intergenic | 30.0% | |
ATCCCATTCTTTACAAAGAA+AGG | + | chr3_3:68014634-68014653 | Msa0466900:CDS | 30.0% | |
AATCTGTTGTAATATCAGAG+AGG | + | chr3_3:68014778-68014797 | Msa0466900:CDS | 30.0% | |
GACTTCTTATATTCATAAGC+TGG | + | chr3_3:68014838-68014857 | Msa0466900:intron | 30.0% | |
ATACATTCTAGCAGGTATAT+TGG | - | chr3_3:68015034-68015053 | None:intergenic | 30.0% | |
AGAATCTAATACATTCTAGC+AGG | - | chr3_3:68015042-68015061 | None:intergenic | 30.0% | |
TTCTGCAGAAAATTATGGTT+TGG | + | chr3_3:68015058-68015077 | Msa0466900:intron | 30.0% | |
ACAAAGATATGTAAGAACGA+TGG | + | chr3_3:68015341-68015360 | Msa0466900:intron | 30.0% | |
AATTTGACCAAAGTCAAAAG+GGG | + | chr3_3:68015495-68015514 | Msa0466900:intron | 30.0% | |
GGATAGCAGAAACTATAAAT+AGG | - | chr3_3:68015676-68015695 | None:intergenic | 30.0% | |
TTAACTAGTTGATTACCTAC+AGG | - | chr3_3:68015733-68015752 | None:intergenic | 30.0% | |
!!! | AGAGAAGGTATTTTTGGTTT+TGG | + | chr3_3:68015824-68015843 | Msa0466900:intron | 30.0% |
!!! | AGGTATTTTTGGTTTTGGAA+AGG | + | chr3_3:68015829-68015848 | Msa0466900:intron | 30.0% |
!!! | TTTGGTTTTGGAAAGGAAAT+TGG | + | chr3_3:68015836-68015855 | Msa0466900:intron | 30.0% |
AAAAGTTAAGATCGTTAAGC+TGG | - | chr3_3:68016113-68016132 | None:intergenic | 30.0% | |
CTGTGACTAATTGTACATAT+GGG | + | chr3_3:68016234-68016253 | Msa0466900:intron | 30.0% | |
!! | AAAAACCTGATCATTTTTCG+GGG | - | chr3_3:68016263-68016282 | None:intergenic | 30.0% |
GGTTCGCATATTTATGATTA+CGG | + | chr3_3:68016416-68016435 | Msa0466900:CDS | 30.0% | |
!! | TAGTTCTTTTGCTGCTTATA+AGG | + | chr3_3:68016526-68016545 | Msa0466900:CDS | 30.0% |
! | TTTAGAATGTGGAATAAGCA+TGG | + | chr3_3:68016810-68016829 | Msa0466900:intron | 30.0% |
TTAGAATGTGGAATAAGCAT+GGG | + | chr3_3:68016811-68016830 | Msa0466900:intron | 30.0% | |
AGTAAGTGATGTTGAAGAAA+AGG | - | chr3_3:68016995-68017014 | None:intergenic | 30.0% | |
!! | TAATGGTGTCATTTGAATCA+TGG | - | chr3_3:68017140-68017159 | None:intergenic | 30.0% |
!! | ACTCGAGATTTTTCAAACAT+TGG | - | chr3_3:68017295-68017314 | None:intergenic | 30.0% |
AATATATGGGGATGAATCTA+TGG | - | chr3_3:68017461-68017480 | None:intergenic | 30.0% | |
TAACATAGCCAAATGCTTTA+TGG | - | chr3_3:68017980-68017999 | None:intergenic | 30.0% | |
!!! | GGATTCGATTTTTTGGGTTT+GGG | - | chr3_3:68010708-68010727 | None:intergenic | 35.0% |
GAATCGAAGAAATGTCAACA+TGG | + | chr3_3:68010791-68010810 | Msa0466900:exon | 35.0% | |
TGATACCTTGAGGTTGAAAA+AGG | - | chr3_3:68010969-68010988 | None:intergenic | 35.0% | |
GTTAGAGCAAAGACGTTATT+AGG | + | chr3_3:68011183-68011202 | Msa0466900:CDS | 35.0% | |
CTATCTATTACCTGTAAACG+AGG | - | chr3_3:68011288-68011307 | None:intergenic | 35.0% | |
TCGTTTCAAAGTCCTTTAGT+TGG | + | chr3_3:68011330-68011349 | Msa0466900:CDS | 35.0% | |
TTCAAAGTCCTTTAGTTGGT+AGG | + | chr3_3:68011562-68011581 | Msa0466900:CDS | 35.0% | |
ATGTTCAACCTACCAACTAA+AGG | - | chr3_3:68011573-68011592 | None:intergenic | 35.0% | |
!! | TTTAGTTGGTAGGTTGAACA+TGG | + | chr3_3:68011572-68011591 | Msa0466900:CDS | 35.0% |
!! | TTAGTTGGTAGGTTGAACAT+GGG | + | chr3_3:68011573-68011592 | Msa0466900:CDS | 35.0% |
GAGAATAAAGTTGTGCATAG+TGG | + | chr3_3:68011600-68011619 | Msa0466900:CDS | 35.0% | |
!! | CAATTTTTCAGCATTCTGAG+GGG | - | chr3_3:68011688-68011707 | None:intergenic | 35.0% |
!! | GCAATTTTTCAGCATTCTGA+GGG | - | chr3_3:68011689-68011708 | None:intergenic | 35.0% |
!! | TGCAATTTTTCAGCATTCTG+AGG | - | chr3_3:68011690-68011709 | None:intergenic | 35.0% |
TCGTTTCAAAGTCCTTTAGT+TGG | + | chr3_3:68011330-68011349 | Msa0466900:CDS | 35.0% | |
TTCAAAGTCCTTTAGTTGGT+AGG | + | chr3_3:68011562-68011581 | Msa0466900:CDS | 35.0% | |
ATGTTCAACCTACCAACTAA+AGG | - | chr3_3:68011573-68011592 | None:intergenic | 35.0% | |
!! | TTTAGTTGGTAGGTTGAACA+TGG | + | chr3_3:68011572-68011591 | Msa0466900:CDS | 35.0% |
!! | TTAGTTGGTAGGTTGAACAT+GGG | + | chr3_3:68011573-68011592 | Msa0466900:CDS | 35.0% |
GAGAATAAAGTTGTGCATAG+TGG | + | chr3_3:68011600-68011619 | Msa0466900:CDS | 35.0% | |
!! | CAATTTTTCAGCATTCTGAG+GGG | - | chr3_3:68011688-68011707 | None:intergenic | 35.0% |
!! | GCAATTTTTCAGCATTCTGA+GGG | - | chr3_3:68011689-68011708 | None:intergenic | 35.0% |
!! | TGCAATTTTTCAGCATTCTG+AGG | - | chr3_3:68011690-68011709 | None:intergenic | 35.0% |
!! | TAAAGGACTTTGAAATGACG+CGG | - | chr3_3:68011988-68012007 | None:intergenic | 35.0% |
TTCTTCAACGTACCAACTAA+AGG | - | chr3_3:68012005-68012024 | None:intergenic | 35.0% | |
! | TTAGTTGGTACGTTGAAGAA+TGG | + | chr3_3:68012005-68012024 | Msa0466900:CDS | 35.0% |
! | CTGGCAGTTTGGAATTTAAT+TGG | - | chr3_3:68012083-68012102 | None:intergenic | 35.0% |
ATTAAATTCCAAACTGCCAG+TGG | + | chr3_3:68012083-68012102 | Msa0466900:CDS | 35.0% | |
TTAAATTCCAAACTGCCAGT+GGG | + | chr3_3:68012084-68012103 | Msa0466900:CDS | 35.0% | |
TCAAAGAAATCTCCCAAATC+AGG | - | chr3_3:68012167-68012186 | None:intergenic | 35.0% | |
GATTTGGGAGATTTCTTTGA+TGG | + | chr3_3:68012167-68012186 | Msa0466900:CDS | 35.0% | |
! | TGTCATTTGATGTACCAAAG+GGG | - | chr3_3:68012282-68012301 | None:intergenic | 35.0% |
!! | GTGTCATTTGATGTACCAAA+GGG | - | chr3_3:68012283-68012302 | None:intergenic | 35.0% |
!! | AGTGTCATTTGATGTACCAA+AGG | - | chr3_3:68012284-68012303 | None:intergenic | 35.0% |
GTTGTGAATGAAAGTGATTG+TGG | + | chr3_3:68012431-68012450 | Msa0466900:CDS | 35.0% | |
CAGGCTGCTTATTATTTGTA+TGG | - | chr3_3:68012625-68012644 | None:intergenic | 35.0% | |
! | GGAAATTCGAGGCTTTTTAA+AGG | - | chr3_3:68012690-68012709 | None:intergenic | 35.0% |
GTAGAGATATTGGAAATTCG+AGG | - | chr3_3:68012701-68012720 | None:intergenic | 35.0% | |
ATTTCCAATATCTCTACCTC+TGG | + | chr3_3:68012704-68012723 | Msa0466900:CDS | 35.0% | |
TGGATAGTGAAATGGATATC+GGG | - | chr3_3:68012902-68012921 | None:intergenic | 35.0% | |
GATATCCATTTCACTATCCA+AGG | + | chr3_3:68012902-68012921 | Msa0466900:CDS | 35.0% | |
AAATTACAGTCAGTACTGCT+CGG | - | chr3_3:68013038-68013057 | None:intergenic | 35.0% | |
! | AGATGCAACTTACTCTTTTG+AGG | - | chr3_3:68013226-68013245 | None:intergenic | 35.0% |
AAACTACGCCAATTAAGACT+AGG | - | chr3_3:68013503-68013522 | None:intergenic | 35.0% | |
GGGTCTTGAATCATTACAAA+TGG | + | chr3_3:68013550-68013569 | Msa0466900:CDS | 35.0% | |
!! | CAAATGGATTGTATGGAAAC+TGG | + | chr3_3:68013566-68013585 | Msa0466900:CDS | 35.0% |
!! | GAATTTTCTTGATGGTAGAC+CGG | - | chr3_3:68013805-68013824 | None:intergenic | 35.0% |
CCATCAAGAAAATTCTTGAG+GGG | + | chr3_3:68013810-68013829 | Msa0466900:CDS | 35.0% | |
CATCAAGAAAATTCTTGAGG+GGG | + | chr3_3:68013811-68013830 | Msa0466900:CDS | 35.0% | |
GGTTAGAATTTCAACTTGCA+CGG | + | chr3_3:68013972-68013991 | Msa0466900:intron | 35.0% | |
TCAAAATATAAGAGGTTCCC+TGG | + | chr3_3:68014012-68014031 | Msa0466900:intron | 35.0% | |
AAGCCACAAAAAAACCTCAA+GGG | - | chr3_3:68014280-68014299 | None:intergenic | 35.0% | |
TAAGCCACAAAAAAACCTCA+AGG | - | chr3_3:68014281-68014300 | None:intergenic | 35.0% | |
!!! | TTGAGGTTTTTTTGTGGCTT+AGG | + | chr3_3:68014280-68014299 | Msa0466900:intron | 35.0% |
ATTTGAGAAAACCATCCAAC+AGG | - | chr3_3:68014338-68014357 | None:intergenic | 35.0% | |
ATGGAACATATAGAGCTCAT+TGG | + | chr3_3:68014408-68014427 | Msa0466900:CDS | 35.0% | |
TGGAACATATAGAGCTCATT+GGG | + | chr3_3:68014409-68014428 | Msa0466900:CDS | 35.0% | |
AGCTCAAGAAAATAAGCTCA+GGG | - | chr3_3:68014515-68014534 | None:intergenic | 35.0% | |
TAGCTCAAGAAAATAAGCTC+AGG | - | chr3_3:68014516-68014535 | None:intergenic | 35.0% | |
! | ATTTTCTTGAGCTAATCGAC+AGG | + | chr3_3:68014522-68014541 | Msa0466900:intron | 35.0% |
CCACTGCTTAACCTAATATA+AGG | - | chr3_3:68014756-68014775 | None:intergenic | 35.0% | |
CCTTATATTAGGTTAAGCAG+TGG | + | chr3_3:68014753-68014772 | Msa0466900:intron | 35.0% | |
TGTTGTAATATCAGAGAGGA+TGG | + | chr3_3:68014782-68014801 | Msa0466900:CDS | 35.0% | |
TCAGACAAAAAGGTGATTGA+TGG | - | chr3_3:68014886-68014905 | None:intergenic | 35.0% | |
GCATAAGCAATCAATACTGA+GGG | - | chr3_3:68014920-68014939 | None:intergenic | 35.0% | |
!! | GCAGAAAATTATGGTTTGGT+AGG | + | chr3_3:68015062-68015081 | Msa0466900:intron | 35.0% |
TTTCCTTGCTTCTAGATACT+AGG | - | chr3_3:68015088-68015107 | None:intergenic | 35.0% | |
!! | TTTATAAGGTATTGGGTCGT+TGG | + | chr3_3:68015291-68015310 | Msa0466900:intron | 35.0% |
ATGTAAGAACGATGGATGAT+TGG | + | chr3_3:68015349-68015368 | Msa0466900:intron | 35.0% | |
! | TATTCATTGGGAAAAGCATG+AGG | + | chr3_3:68015399-68015418 | Msa0466900:intron | 35.0% |
!! | TTTTGTTTCGTCCTTTCTTC+TGG | - | chr3_3:68015556-68015575 | None:intergenic | 35.0% |
AGAAGAAAGGACGAAACAAA+AGG | + | chr3_3:68015555-68015574 | Msa0466900:intron | 35.0% | |
TGTGTTTCTTTGCTAGAGAT+GGG | - | chr3_3:68015627-68015646 | None:intergenic | 35.0% | |
ATGTGTTTCTTTGCTAGAGA+TGG | - | chr3_3:68015628-68015647 | None:intergenic | 35.0% | |
TTTATGATAGGTAGTCCTGT+AGG | + | chr3_3:68015715-68015734 | Msa0466900:intron | 35.0% | |
!!! | GAGATCAGAGAAGGTATTTT+TGG | + | chr3_3:68015818-68015837 | Msa0466900:intron | 35.0% |
! | AAGTCTTGTGTTCAACAACT+TGG | - | chr3_3:68015974-68015993 | None:intergenic | 35.0% |
AGCCATATCCAAATTTACAG+TGG | - | chr3_3:68016158-68016177 | None:intergenic | 35.0% | |
CCATATGTACAATTAGTCAC+AGG | - | chr3_3:68016236-68016255 | None:intergenic | 35.0% | |
CCTGTGACTAATTGTACATA+TGG | + | chr3_3:68016233-68016252 | Msa0466900:intron | 35.0% | |
! | TATTGTTTCGGAGTATCAGA+AGG | + | chr3_3:68016385-68016404 | Msa0466900:CDS | 35.0% |
GAGTATCAGAAGGAAATAAC+TGG | + | chr3_3:68016395-68016414 | Msa0466900:CDS | 35.0% | |
GGCTAAGATATATAAGATGC+TGG | + | chr3_3:68016451-68016470 | Msa0466900:CDS | 35.0% | |
ATATCTGCCATTAGGAATTC+GGG | - | chr3_3:68016491-68016510 | None:intergenic | 35.0% | |
CATATCTGCCATTAGGAATT+CGG | - | chr3_3:68016492-68016511 | None:intergenic | 35.0% | |
TTGATTTACCTGACCTAATG+AGG | - | chr3_3:68016899-68016918 | None:intergenic | 35.0% | |
CATTAGGTCAGGTAAATCAA+AGG | + | chr3_3:68016899-68016918 | Msa0466900:intron | 35.0% | |
GGTTGAACTTGAAAAGAGAT+TGG | + | chr3_3:68016920-68016939 | Msa0466900:intron | 35.0% | |
CATAGGTGTCTTTGAACTAA+AGG | + | chr3_3:68017100-68017119 | Msa0466900:intron | 35.0% | |
! | TTGGTAGTATCAAGTCACAA+AGG | - | chr3_3:68017276-68017295 | None:intergenic | 35.0% |
! | CCTATTTCTCATTAACATGC+AGG | - | chr3_3:68017750-68017769 | None:intergenic | 35.0% |
CCTGCATGTTAATGAGAAAT+AGG | + | chr3_3:68017747-68017766 | Msa0466900:intron | 35.0% | |
TGAGAAATAGGAAAGCTAGT+AGG | + | chr3_3:68017759-68017778 | Msa0466900:intron | 35.0% | |
GAGAAATAGGAAAGCTAGTA+GGG | + | chr3_3:68017760-68017779 | Msa0466900:intron | 35.0% | |
AGAAATAGGAAAGCTAGTAG+GGG | + | chr3_3:68017761-68017780 | Msa0466900:intron | 35.0% | |
! | TCTAGCTTAATAGGTTACCA+GGG | + | chr3_3:68017877-68017896 | Msa0466900:intron | 35.0% |
! | GGAAAAGACCATAAAGCATT+TGG | + | chr3_3:68017969-68017988 | Msa0466900:CDS | 35.0% |
!!! | TTTTTTGGGTTTGGGAATGG+CGG | - | chr3_3:68010700-68010719 | None:intergenic | 40.0% |
!!! | CGATTTTTTGGGTTTGGGAA+TGG | - | chr3_3:68010703-68010722 | None:intergenic | 40.0% |
!!! | GGGATTCGATTTTTTGGGTT+TGG | - | chr3_3:68010709-68010728 | None:intergenic | 40.0% |
TTGCCACCGGTAATTGTTAT+CGG | - | chr3_3:68010833-68010852 | None:intergenic | 40.0% | |
AAGATCGTACATGGAAGGAA+GGG | - | chr3_3:68010923-68010942 | None:intergenic | 40.0% | |
ATGAAGGAGAAGATCGTACA+TGG | - | chr3_3:68010932-68010951 | None:intergenic | 40.0% | |
! | TTGAGGTTGAAAAAGGTGTG+AGG | - | chr3_3:68010962-68010981 | None:intergenic | 40.0% |
!!! | TCACACCTTTTTCAACCTCA+AGG | + | chr3_3:68010961-68010980 | Msa0466900:CDS | 40.0% |
GGATTGCATGAAGAAACTGT+TGG | + | chr3_3:68011204-68011223 | Msa0466900:CDS | 40.0% | |
GCTCCGATAAAATTCCAAAC+TGG | + | chr3_3:68011429-68011448 | Msa0466900:CDS | 40.0% | |
ATTGCCTCATTTGCAGCTTA+TGG | + | chr3_3:68011509-68011528 | Msa0466900:CDS | 40.0% | |
CTATCCATAAGCTGCAAATG+AGG | - | chr3_3:68011516-68011535 | None:intergenic | 40.0% | |
ATTGCCTCATTTGCAGCTTA+TGG | + | chr3_3:68011509-68011528 | Msa0466900:CDS | 40.0% | |
CTATCCATAAGCTGCAAATG+AGG | - | chr3_3:68011516-68011535 | None:intergenic | 40.0% | |
ATTGCCTCATTTGCAGCTTA+TGG | + | chr3_3:68011509-68011528 | Msa0466900:CDS | 40.0% | |
CTATCCATAAGCTGCAAATG+AGG | - | chr3_3:68011516-68011535 | None:intergenic | 40.0% | |
GAGAGTAAATTTGTGCAACC+AGG | + | chr3_3:68012032-68012051 | Msa0466900:CDS | 40.0% | |
AAATTTGTGCAACCAGGTAG+TGG | + | chr3_3:68012038-68012057 | Msa0466900:CDS | 40.0% | |
! | CTTCTTGGTGATCCTGATTT+GGG | + | chr3_3:68012152-68012171 | Msa0466900:CDS | 40.0% |
TTGGGAGATTTCTTTGATGG+TGG | + | chr3_3:68012170-68012189 | Msa0466900:CDS | 40.0% | |
!! | AGATTCGCTTTTCTCGTTTC+TGG | + | chr3_3:68012193-68012212 | Msa0466900:CDS | 40.0% |
!! | CTTTTCTCGTTTCTGGATCA+GGG | + | chr3_3:68012200-68012219 | Msa0466900:CDS | 40.0% |
ACTCTCACTTCTTTCAACAG+AGG | - | chr3_3:68012246-68012265 | None:intergenic | 40.0% | |
TTTGTTTCGAAGGCTGCAAA+GGG | - | chr3_3:68012346-68012365 | None:intergenic | 40.0% | |
ATTTGTTTCGAAGGCTGCAA+AGG | - | chr3_3:68012347-68012366 | None:intergenic | 40.0% | |
TTTGCAGCCTTCGAAACAAA+TGG | + | chr3_3:68012346-68012365 | Msa0466900:CDS | 40.0% | |
TCAAATAAGCTTCGCAACGA+AGG | + | chr3_3:68012374-68012393 | Msa0466900:CDS | 40.0% | |
!!! | CAGGAGCTTTGCTACTTTTA+TGG | - | chr3_3:68012457-68012476 | None:intergenic | 40.0% |
CATAAAAGTAGCAAAGCTCC+TGG | + | chr3_3:68012455-68012474 | Msa0466900:CDS | 40.0% | |
! | TCTTCAAGAATGGATTCACG+TGG | + | chr3_3:68012548-68012567 | Msa0466900:CDS | 40.0% |
GATTCACGTGGAAAACCATT+GGG | + | chr3_3:68012560-68012579 | Msa0466900:CDS | 40.0% | |
! | ATGGACTGTCTTAACGGTAT+TGG | - | chr3_3:68012606-68012625 | None:intergenic | 40.0% |
AATAATAAGCAGCCTGCTAG+TGG | + | chr3_3:68012629-68012648 | Msa0466900:CDS | 40.0% | |
ATAATAAGCAGCCTGCTAGT+GGG | + | chr3_3:68012630-68012649 | Msa0466900:CDS | 40.0% | |
! | GATTTGGCTCAATTATCCTC+TGG | + | chr3_3:68012847-68012866 | Msa0466900:intron | 40.0% |
TGCTTCTGGACTCAAAAGAA+AGG | + | chr3_3:68012870-68012889 | Msa0466900:CDS | 40.0% | |
TGCATCCTTGGATAGTGAAA+TGG | - | chr3_3:68012910-68012929 | None:intergenic | 40.0% | |
AATTCCTTGATGTGCATCCT+TGG | - | chr3_3:68012922-68012941 | None:intergenic | 40.0% | |
TCCTCCATTAGAGCAAAAAG+TGG | + | chr3_3:68012951-68012970 | Msa0466900:CDS | 40.0% | |
!!! | ACCACTTTTTGCTCTAATGG+AGG | - | chr3_3:68012955-68012974 | None:intergenic | 40.0% |
!!! | CTGACCACTTTTTGCTCTAA+TGG | - | chr3_3:68012958-68012977 | None:intergenic | 40.0% |
TGTTCTTTACTGTCTTGTCC+TGG | + | chr3_3:68012998-68013017 | Msa0466900:intron | 40.0% | |
GTTCTTTACTGTCTTGTCCT+GGG | + | chr3_3:68012999-68013018 | Msa0466900:intron | 40.0% | |
CATTACTATCAGAGCCATCA+TGG | - | chr3_3:68013143-68013162 | None:intergenic | 40.0% | |
!! | CATGATGGCTCTGATAGTAA+TGG | + | chr3_3:68013141-68013160 | Msa0466900:CDS | 40.0% |
!! | TGGCTCTGATAGTAATGGTA+TGG | + | chr3_3:68013146-68013165 | Msa0466900:CDS | 40.0% |
! | GGCTCTGATAGTAATGGTAT+GGG | + | chr3_3:68013147-68013166 | Msa0466900:CDS | 40.0% |
ATCCATCTATTGACACAGCA+CGG | + | chr3_3:68013183-68013202 | Msa0466900:CDS | 40.0% | |
TTCGTAGTTACTGGAGATAC+TGG | - | chr3_3:68013266-68013285 | None:intergenic | 40.0% | |
AGTATCTCCAGTAACTACGA+AGG | + | chr3_3:68013265-68013284 | Msa0466900:intron | 40.0% | |
AGCTATTCCTTCGTAGTTAC+TGG | - | chr3_3:68013275-68013294 | None:intergenic | 40.0% | |
CTTCAATTGCACATCTCTCT+AGG | + | chr3_3:68013526-68013545 | Msa0466900:intron | 40.0% | |
AATTGCACATCTCTCTAGGT+GGG | + | chr3_3:68013530-68013549 | Msa0466900:intron | 40.0% | |
! | CCCCTCAAGAATTTTCTTGA+TGG | - | chr3_3:68013813-68013832 | None:intergenic | 40.0% |
AAGAAAATTCTTGAGGGGGA+TGG | + | chr3_3:68013815-68013834 | Msa0466900:CDS | 40.0% | |
CAGAGAGTCATCATTGAAGA+AGG | - | chr3_3:68013845-68013864 | None:intergenic | 40.0% | |
TGTTCCATTGTCAAAGCAAC+TGG | + | chr3_3:68014086-68014105 | Msa0466900:CDS | 40.0% | |
TGTTTGTAGGACAGAAGCTT+CGG | + | chr3_3:68014121-68014140 | Msa0466900:CDS | 40.0% | |
TCTGCACAAGGAATATGAGA+AGG | - | chr3_3:68014215-68014234 | None:intergenic | 40.0% | |
TCATATTCCTTGTGCAGATC+TGG | + | chr3_3:68014217-68014236 | Msa0466900:intron | 40.0% | |
CATATTCCTTGTGCAGATCT+GGG | + | chr3_3:68014218-68014237 | Msa0466900:intron | 40.0% | |
ATATTCCTTGTGCAGATCTG+GGG | + | chr3_3:68014219-68014238 | Msa0466900:intron | 40.0% | |
AGCCACAAAAAAACCTCAAG+GGG | - | chr3_3:68014279-68014298 | None:intergenic | 40.0% | |
TAATCGACAGGTAAAGTTGC+TGG | + | chr3_3:68014534-68014553 | Msa0466900:intron | 40.0% | |
ATGCATTTGAAAGCCAAAGG+TGG | - | chr3_3:68014561-68014580 | None:intergenic | 40.0% | |
CGGTTTAGTACCTCAAACTT+TGG | + | chr3_3:68014593-68014612 | Msa0466900:CDS | 40.0% | |
TTAGTACCTCAAACTTTGGC+AGG | + | chr3_3:68014597-68014616 | Msa0466900:CDS | 40.0% | |
GTAATTCCTGCCAAAGTTTG+AGG | - | chr3_3:68014606-68014625 | None:intergenic | 40.0% | |
GAGGATGGAGAGTAAAATGA+TGG | + | chr3_3:68014797-68014816 | Msa0466900:CDS | 40.0% | |
CGCATAAGCAATCAATACTG+AGG | - | chr3_3:68014921-68014940 | None:intergenic | 40.0% | |
CAACTCTTCGAAAAAGCAAC+CGG | + | chr3_3:68015167-68015186 | Msa0466900:intron | 40.0% | |
ATAGAAATAAGGCCCTACAC+CGG | - | chr3_3:68015189-68015208 | None:intergenic | 40.0% | |
GTTTCTGCTATCCTTACAGA+TGG | + | chr3_3:68015683-68015702 | Msa0466900:intron | 40.0% | |
TTTAGTTAGGGCATGTGAGA+TGG | + | chr3_3:68015772-68015791 | Msa0466900:intron | 40.0% | |
! | CCTTCTCTGATCTCTCTTTT+CGG | - | chr3_3:68015812-68015831 | None:intergenic | 40.0% |
AAAACTTCGAGCAACCTGAT+AGG | - | chr3_3:68015930-68015949 | None:intergenic | 40.0% | |
TTCTGTCGCCACTGTAAATT+TGG | + | chr3_3:68016147-68016166 | Msa0466900:intron | 40.0% | |
CGCCACTGTAAATTTGGATA+TGG | + | chr3_3:68016153-68016172 | Msa0466900:intron | 40.0% | |
!! | TATGGCTTGCTGCATAATGA+AGG | + | chr3_3:68016171-68016190 | Msa0466900:intron | 40.0% |
TATGATTACGGCAATAGCGA+AGG | + | chr3_3:68016428-68016447 | Msa0466900:CDS | 40.0% | |
ATGATTACGGCAATAGCGAA+GGG | + | chr3_3:68016429-68016448 | Msa0466900:CDS | 40.0% | |
GCAAAAGAACTAAGTTGCTC+CGG | - | chr3_3:68016518-68016537 | None:intergenic | 40.0% | |
ATGGTTTCACATCCATCTTC+AGG | + | chr3_3:68016609-68016628 | Msa0466900:intron | 40.0% | |
ACTTACTGTCTCCCTTCATT+TGG | + | chr3_3:68017008-68017027 | Msa0466900:intron | 40.0% | |
CAATGCACCTTCCAAATGAA+GGG | - | chr3_3:68017022-68017041 | None:intergenic | 40.0% | |
ACAATGCACCTTCCAAATGA+AGG | - | chr3_3:68017023-68017042 | None:intergenic | 40.0% | |
!! | CTTGATCCAGAAAGTGTCAT+AGG | + | chr3_3:68017083-68017102 | Msa0466900:intron | 40.0% |
AAGACACCTATGACACTTTC+TGG | - | chr3_3:68017092-68017111 | None:intergenic | 40.0% | |
GTAACACGAAGATTGTAGCA+CGG | + | chr3_3:68017348-68017367 | Msa0466900:intron | 40.0% | |
TAGCACGGATCCTACTAATA+GGG | + | chr3_3:68017363-68017382 | Msa0466900:intron | 40.0% | |
ATGGGGATGAATCTATGGAA+GGG | - | chr3_3:68017456-68017475 | None:intergenic | 40.0% | |
TATGGGGATGAATCTATGGA+AGG | - | chr3_3:68017457-68017476 | None:intergenic | 40.0% | |
!! | AACAAACTCTAGAGTTGCTG+AGG | - | chr3_3:68017545-68017564 | None:intergenic | 40.0% |
! | AAAGCTAGTAGGGGATTAGT+TGG | + | chr3_3:68017770-68017789 | Msa0466900:intron | 40.0% |
! | GCTATGTGGTCTAGCTTAAT+AGG | + | chr3_3:68017868-68017887 | Msa0466900:intron | 40.0% |
! | GTCTAGCTTAATAGGTTACC+AGG | + | chr3_3:68017876-68017895 | Msa0466900:intron | 40.0% |
CTAGCTTAATAGGTTACCAG+GGG | + | chr3_3:68017878-68017897 | Msa0466900:intron | 40.0% | |
!!! | TTTTTGGGTTTGGGAATGGC+GGG | - | chr3_3:68010699-68010718 | None:intergenic | 45.0% |
AGATCGTACATGGAAGGAAG+GGG | - | chr3_3:68010922-68010941 | None:intergenic | 45.0% | |
GAAGATCGTACATGGAAGGA+AGG | - | chr3_3:68010924-68010943 | None:intergenic | 45.0% | |
AGGAGAAGATCGTACATGGA+AGG | - | chr3_3:68010928-68010947 | None:intergenic | 45.0% | |
! | AGGTTGAAAAAGGTGTGAGG+CGG | - | chr3_3:68010959-68010978 | None:intergenic | 45.0% |
!! | TCGCTTTTCAAGACAGCTTC+TGG | + | chr3_3:68011129-68011148 | Msa0466900:CDS | 45.0% |
TCAAGACGAACCTCGTTTAC+AGG | + | chr3_3:68011275-68011294 | Msa0466900:CDS | 45.0% | |
CCACTACGACTACCAATATC+TGG | - | chr3_3:68011393-68011412 | None:intergenic | 45.0% | |
! | CCAGATATTGGTAGTCGTAG+TGG | + | chr3_3:68011390-68011409 | Msa0466900:CDS | 45.0% |
! | GTGCATAGTGGTAGTGTTAG+TGG | + | chr3_3:68011612-68011631 | Msa0466900:CDS | 45.0% |
! | TGGTAGTGTTAGTGGTGCTA+AGG | + | chr3_3:68011620-68011639 | Msa0466900:CDS | 45.0% |
! | GTGCATAGTGGTAGTGTTAG+TGG | + | chr3_3:68011612-68011631 | Msa0466900:CDS | 45.0% |
! | TGGTAGTGTTAGTGGTGCTA+AGG | + | chr3_3:68011620-68011639 | Msa0466900:CDS | 45.0% |
AATAGATAACGACCTCCCAC+TGG | - | chr3_3:68012102-68012121 | None:intergenic | 45.0% | |
GGGAGGTCGTTATCTATTTC+TGG | + | chr3_3:68012104-68012123 | Msa0466900:CDS | 45.0% | |
! | GCTTCTTGGTGATCCTGATT+TGG | + | chr3_3:68012151-68012170 | Msa0466900:CDS | 45.0% |
!! | GCTTTTCTCGTTTCTGGATC+AGG | + | chr3_3:68012199-68012218 | Msa0466900:CDS | 45.0% |
AACAGAGGAAGTGATTGTGC+TGG | - | chr3_3:68012231-68012250 | None:intergenic | 45.0% | |
AAGCTTCGCAACGAAGGTAA+TGG | + | chr3_3:68012380-68012399 | Msa0466900:CDS | 45.0% | |
AGCTTCGCAACGAAGGTAAT+GGG | + | chr3_3:68012381-68012400 | Msa0466900:CDS | 45.0% | |
TTATACAAGGGTTTCGGTCC+AGG | - | chr3_3:68012476-68012495 | None:intergenic | 45.0% | |
GGATTCACGTGGAAAACCAT+TGG | + | chr3_3:68012559-68012578 | Msa0466900:CDS | 45.0% | |
! | ATTCTCCTTTTCCCACTAGC+AGG | - | chr3_3:68012644-68012663 | None:intergenic | 45.0% |
GCTAGTGGGAAAAGGAGAAT+AGG | + | chr3_3:68012644-68012663 | Msa0466900:CDS | 45.0% | |
GTCACCAGAGGTAGAGATAT+TGG | - | chr3_3:68012711-68012730 | None:intergenic | 45.0% | |
TTGAACATCTTGGTCACCAG+AGG | - | chr3_3:68012723-68012742 | None:intergenic | 45.0% | |
CAATTATCCTCTGGTGCTTC+TGG | + | chr3_3:68012856-68012875 | Msa0466900:CDS | 45.0% | |
CTATCCAAGGATGCACATCA+AGG | + | chr3_3:68012915-68012934 | Msa0466900:CDS | 45.0% | |
ATTACCTGATGTCACCTGTC+TGG | - | chr3_3:68013103-68013122 | None:intergenic | 45.0% | |
GGAGCGTACATATTCCATGA+TGG | + | chr3_3:68013126-68013145 | Msa0466900:CDS | 45.0% | |
!!! | CTCTTTTGAGGCAAAACGCA+GGG | - | chr3_3:68013214-68013233 | None:intergenic | 45.0% |
!!! | ACTCTTTTGAGGCAAAACGC+AGG | - | chr3_3:68013215-68013234 | None:intergenic | 45.0% |
! | GATACTGGAAGCACAAGTTC+AGG | - | chr3_3:68013251-68013270 | None:intergenic | 45.0% |
GATGCAAGGACATGTCAGTT+AGG | + | chr3_3:68013321-68013340 | Msa0466900:intron | 45.0% | |
GAATGATAAGAGGTCCTCTG+TGG | + | chr3_3:68013397-68013416 | Msa0466900:intron | 45.0% | |
ATTTGGCGGAGTTTGGTACT+TGG | + | chr3_3:68013432-68013451 | Msa0466900:intron | 45.0% | |
CAATTGCACATCTCTCTAGG+TGG | + | chr3_3:68013529-68013548 | Msa0466900:intron | 45.0% | |
ATGAGAGATGCTATCCAGCT+AGG | + | chr3_3:68013595-68013614 | Msa0466900:CDS | 45.0% | |
! | AATTTTCCAGCACACCTAGC+TGG | - | chr3_3:68013612-68013631 | None:intergenic | 45.0% |
GACTGTATCAAACGTGCTTG+AGG | + | chr3_3:68013635-68013654 | Msa0466900:CDS | 45.0% | |
TGCTTGAGGAACTGAAGTAC+AGG | + | chr3_3:68013649-68013668 | Msa0466900:CDS | 45.0% | |
!! | TTTTCTTGATGGTAGACCGG+TGG | - | chr3_3:68013802-68013821 | None:intergenic | 45.0% |
TCTGATCATGTGCTTGACAG+TGG | + | chr3_3:68013881-68013900 | Msa0466900:CDS | 45.0% | |
CTGATCATGTGCTTGACAGT+GGG | + | chr3_3:68013882-68013901 | Msa0466900:CDS | 45.0% | |
TGATCATGTGCTTGACAGTG+GGG | + | chr3_3:68013883-68013902 | Msa0466900:CDS | 45.0% | |
GCATTATCTGAGCCACAAAC+CGG | + | chr3_3:68013905-68013924 | Msa0466900:CDS | 45.0% | |
CATTATCTGAGCCACAAACC+GGG | + | chr3_3:68013906-68013925 | Msa0466900:CDS | 45.0% | |
GCTGCTGGAAGATTGTTTGT+AGG | + | chr3_3:68014108-68014127 | Msa0466900:CDS | 45.0% | |
GTTTGTAGGACAGAAGCTTC+GGG | + | chr3_3:68014122-68014141 | Msa0466900:CDS | 45.0% | |
AAAACCTCAAGGGGTGAAAC+TGG | - | chr3_3:68014270-68014289 | None:intergenic | 45.0% | |
!!! | CACCCCTTGAGGTTTTTTTG+TGG | + | chr3_3:68014274-68014293 | Msa0466900:intron | 45.0% |
GTGTGGATGTGTATTCCTGT+TGG | + | chr3_3:68014320-68014339 | Msa0466900:intron | 45.0% | |
GGATGTGTATTCCTGTTGGA+TGG | + | chr3_3:68014324-68014343 | Msa0466900:intron | 45.0% | |
ATAGAGCTCATTGGGCAGAT+CGG | + | chr3_3:68014417-68014436 | Msa0466900:CDS | 45.0% | |
TAAAGTTGCTGGTCCACCTT+TGG | + | chr3_3:68014545-68014564 | Msa0466900:CDS | 45.0% | |
TGATGGAGCTGCACAATCAA+AGG | + | chr3_3:68014814-68014833 | Msa0466900:CDS | 45.0% | |
AGGCCTAGTATCTAGAAGCA+AGG | + | chr3_3:68015082-68015101 | Msa0466900:intron | 45.0% | |
TTCGAAAAAGCAACCGGTGT+AGG | + | chr3_3:68015173-68015192 | Msa0466900:intron | 45.0% | |
TCGAAAAAGCAACCGGTGTA+GGG | + | chr3_3:68015174-68015193 | Msa0466900:intron | 45.0% | |
GATTGGTATGACAACTGCCA+AGG | + | chr3_3:68015366-68015385 | Msa0466900:intron | 45.0% | |
TTGCTAGAGATGGGAGGAAA+TGG | - | chr3_3:68015618-68015637 | None:intergenic | 45.0% | |
GTTTCTTTGCTAGAGATGGG+AGG | - | chr3_3:68015624-68015643 | None:intergenic | 45.0% | |
CCGAAAAGAGAGATCAGAGA+AGG | + | chr3_3:68015809-68015828 | Msa0466900:intron | 45.0% | |
GGAAACCCCGAAAAATGATC+AGG | + | chr3_3:68016255-68016274 | Msa0466900:intron | 45.0% | |
! | AGGTTTTTACAGTGCGTGTG+TGG | + | chr3_3:68016275-68016294 | Msa0466900:intron | 45.0% |
CTGTGACTGATCACCTTGTA+TGG | + | chr3_3:68016335-68016354 | Msa0466900:intron | 45.0% | |
TGATTACGGCAATAGCGAAG+GGG | + | chr3_3:68016430-68016449 | Msa0466900:CDS | 45.0% | |
TGCAGAACCCGAATTCCTAA+TGG | + | chr3_3:68016481-68016500 | Msa0466900:CDS | 45.0% | |
CCTAATGGCAGATATGACTC+CGG | + | chr3_3:68016496-68016515 | Msa0466900:CDS | 45.0% | |
CAAAGAGCAGCAACCTCATT+AGG | + | chr3_3:68016883-68016902 | Msa0466900:intron | 45.0% | |
ACTGTCTCCCTTCATTTGGA+AGG | + | chr3_3:68017012-68017031 | Msa0466900:intron | 45.0% | |
GATGCTAACTTCCTCACAGT+TGG | + | chr3_3:68017050-68017069 | Msa0466900:intron | 45.0% | |
GCAAACAATAGCCAACTGTG+AGG | - | chr3_3:68017064-68017083 | None:intergenic | 45.0% | |
GAAAAATCTCGAGTCTACGC+AGG | + | chr3_3:68017301-68017320 | Msa0466900:intron | 45.0% | |
GTAGCACGGATCCTACTAAT+AGG | + | chr3_3:68017362-68017381 | Msa0466900:intron | 45.0% | |
! | ACCAGGGGATTTGTTTCAAG+TGG | + | chr3_3:68017893-68017912 | Msa0466900:intron | 45.0% |
TCCACTTGAAACAAATCCCC+TGG | - | chr3_3:68017897-68017916 | None:intergenic | 45.0% | |
GGTAATTGTTATCGGCGTCG+GGG | - | chr3_3:68010825-68010844 | None:intergenic | 50.0% | |
CGGTAATTGTTATCGGCGTC+GGG | - | chr3_3:68010826-68010845 | None:intergenic | 50.0% | |
CCGGTAATTGTTATCGGCGT+CGG | - | chr3_3:68010827-68010846 | None:intergenic | 50.0% | |
CCGACGCCGATAACAATTAC+CGG | + | chr3_3:68010824-68010843 | Msa0466900:CDS | 50.0% | |
ACGCCGATAACAATTACCGG+TGG | + | chr3_3:68010827-68010846 | Msa0466900:CDS | 50.0% | |
ATAGAAGTAGGAGGGGGTGA+GGG | - | chr3_3:68010889-68010908 | None:intergenic | 50.0% | |
AATAGAAGTAGGAGGGGGTG+AGG | - | chr3_3:68010890-68010909 | None:intergenic | 50.0% | |
GTGGGAATAGAAGTAGGAGG+GGG | - | chr3_3:68010895-68010914 | None:intergenic | 50.0% | |
GGTGGGAATAGAAGTAGGAG+GGG | - | chr3_3:68010896-68010915 | None:intergenic | 50.0% | |
GGGTGGGAATAGAAGTAGGA+GGG | - | chr3_3:68010897-68010916 | None:intergenic | 50.0% | |
!! | ACTTTGAAACGACGCAGCAC+TGG | - | chr3_3:68011322-68011341 | None:intergenic | 50.0% |
! | ATTGGTAGTCGTAGTGGTGC+TGG | + | chr3_3:68011396-68011415 | Msa0466900:CDS | 50.0% |
! | TTTGTGCAACCAGGTAGTGG+TGG | + | chr3_3:68012041-68012060 | Msa0466900:CDS | 50.0% |
AATTCCAAACTGCCAGTGGG+AGG | + | chr3_3:68012087-68012106 | Msa0466900:CDS | 50.0% | |
ACGTGGAAAACCATTGGGCA+GGG | + | chr3_3:68012565-68012584 | Msa0466900:CDS | 50.0% | |
AAAACCATTGGGCAGGGCAT+TGG | + | chr3_3:68012571-68012590 | Msa0466900:CDS | 50.0% | |
!! | TTTGAGTCCAGAAGCACCAG+AGG | - | chr3_3:68012866-68012885 | None:intergenic | 50.0% |
TCTTGTCCTGGGACCTCATT+TGG | + | chr3_3:68013010-68013029 | Msa0466900:intron | 50.0% | |
GTACTGCTCGGTACCAAATG+AGG | - | chr3_3:68013026-68013045 | None:intergenic | 50.0% | |
TTCTCCCAATACAGCCAGAC+AGG | + | chr3_3:68013086-68013105 | Msa0466900:CDS | 50.0% | |
GTCACCTGTCTGGCTGTATT+GGG | - | chr3_3:68013093-68013112 | None:intergenic | 50.0% | |
TGTCACCTGTCTGGCTGTAT+TGG | - | chr3_3:68013094-68013113 | None:intergenic | 50.0% | |
CAGGTGACATCAGGTAATGC+AGG | + | chr3_3:68013105-68013124 | Msa0466900:CDS | 50.0% | |
CTCCGTGCTGTGTCAATAGA+TGG | - | chr3_3:68013188-68013207 | None:intergenic | 50.0% | |
GCAAGGACATGTCAGTTAGG+TGG | + | chr3_3:68013324-68013343 | Msa0466900:intron | 50.0% | |
!! | TTGGTACTTGGAGGGCACTT+TGG | + | chr3_3:68013444-68013463 | Msa0466900:intron | 50.0% |
GAGAAGTGAATCATGGCCAC+CGG | + | chr3_3:68013783-68013802 | Msa0466900:CDS | 50.0% | |
ACAAACCGGGAATCAGAGCA+GGG | + | chr3_3:68013919-68013938 | Msa0466900:CDS | 50.0% | |
! | GCAGCCAGTTGCTTTGACAA+TGG | - | chr3_3:68014093-68014112 | None:intergenic | 50.0% |
TTGTCAAAGCAACTGGCTGC+TGG | + | chr3_3:68014093-68014112 | Msa0466900:CDS | 50.0% | |
ATCTGGGGAGCAGGTTTATG+CGG | + | chr3_3:68014234-68014253 | Msa0466900:CDS | 50.0% | |
CAGGTTTATGCGGCTGGAAT+GGG | + | chr3_3:68014244-68014263 | Msa0466900:CDS | 50.0% | |
ACCAAAGTCAAAAGGGGAGC+AGG | + | chr3_3:68015501-68015520 | Msa0466900:intron | 50.0% | |
!!! | TCCTGCTCCCCTTTTGACTT+TGG | - | chr3_3:68015505-68015524 | None:intergenic | 50.0% |
GATGGCTATATAGGGCAACC+TGG | + | chr3_3:68016079-68016098 | Msa0466900:intron | 50.0% | |
TATATAGGGCAACCTGGCCT+TGG | + | chr3_3:68016085-68016104 | Msa0466900:intron | 50.0% | |
! | ATATAGGGCAACCTGGCCTT+GGG | + | chr3_3:68016086-68016105 | Msa0466900:intron | 50.0% |
AGATCGTTAAGCTGGTCCCA+AGG | - | chr3_3:68016105-68016124 | None:intergenic | 50.0% | |
CCGGAGTCATATCTGCCATT+AGG | - | chr3_3:68016499-68016518 | None:intergenic | 50.0% | |
AGCAGCAACCTCATTAGGTC+AGG | + | chr3_3:68016888-68016907 | Msa0466900:intron | 50.0% | |
ATCTCGAGTCTACGCAGGAT+CGG | + | chr3_3:68017306-68017325 | Msa0466900:intron | 50.0% | |
CTACGCACTCACTCTTCTCC+CGG | - | chr3_3:68010656-68010675 | None:intergenic | 55.0% | |
! | AATTGTTATCGGCGTCGGGG+AGG | - | chr3_3:68010822-68010841 | None:intergenic | 55.0% |
!! | CGTCGGAGTTGATTTGCCAC+CGG | - | chr3_3:68010846-68010865 | None:intergenic | 55.0% |
GGGGTGGGAATAGAAGTAGG+AGG | - | chr3_3:68010898-68010917 | None:intergenic | 55.0% | |
GGAGGGGTGGGAATAGAAGT+AGG | - | chr3_3:68010901-68010920 | None:intergenic | 55.0% | |
GTACATGGAAGGAAGGGGAG+GGG | - | chr3_3:68010917-68010936 | None:intergenic | 55.0% | |
CGTACATGGAAGGAAGGGGA+GGG | - | chr3_3:68010918-68010937 | None:intergenic | 55.0% | |
TCGTACATGGAAGGAAGGGG+AGG | - | chr3_3:68010919-68010938 | None:intergenic | 55.0% | |
TTAGCACCACCACCACTACC+TGG | - | chr3_3:68012053-68012072 | None:intergenic | 55.0% | |
GTGATGCGTTGAAACGCGCT+AGG | + | chr3_3:68012126-68012145 | Msa0466900:CDS | 55.0% | |
ATGCGTTGAAACGCGCTAGG+AGG | + | chr3_3:68012129-68012148 | Msa0466900:CDS | 55.0% | |
AAACGCGCTAGGAGGCTTCT+TGG | + | chr3_3:68012137-68012156 | Msa0466900:CDS | 55.0% | |
CACGTGGAAAACCATTGGGC+AGG | + | chr3_3:68012564-68012583 | Msa0466900:CDS | 55.0% | |
AGCAGCCTGCTAGTGGGAAA+AGG | + | chr3_3:68012636-68012655 | Msa0466900:CDS | 55.0% | |
TCGGTACCAAATGAGGTCCC+AGG | - | chr3_3:68013019-68013038 | None:intergenic | 55.0% | |
ACAGCCAGACAGGTGACATC+AGG | + | chr3_3:68013096-68013115 | Msa0466900:CDS | 55.0% | |
TGGCGGAGTTTGGTACTTGG+AGG | + | chr3_3:68013435-68013454 | Msa0466900:intron | 55.0% | |
GGCGGAGTTTGGTACTTGGA+GGG | + | chr3_3:68013436-68013455 | Msa0466900:intron | 55.0% | |
TGCTATCCAGCTAGGTGTGC+TGG | + | chr3_3:68013603-68013622 | Msa0466900:CDS | 55.0% | |
! | CTGCTCTGATTCCCGGTTTG+TGG | - | chr3_3:68013920-68013939 | None:intergenic | 55.0% |
CACAAACCGGGAATCAGAGC+AGG | + | chr3_3:68013918-68013937 | Msa0466900:CDS | 55.0% | |
AGAAGCTTCGGGTAGTGTGC+TGG | + | chr3_3:68014133-68014152 | Msa0466900:intron | 55.0% | |
GCAGGTTTATGCGGCTGGAA+TGG | + | chr3_3:68014243-68014262 | Msa0466900:CDS | 55.0% | |
GCTCATTGGGCAGATCGGTT+AGG | + | chr3_3:68014422-68014441 | Msa0466900:CDS | 55.0% | |
GTTAGGGCATGTGAGATGGC+AGG | + | chr3_3:68015776-68015795 | Msa0466900:intron | 55.0% | |
CTTGTATGGCGCTAGACGCT+CGG | + | chr3_3:68016349-68016368 | Msa0466900:intron | 55.0% | |
TCTCGAGTCTACGCAGGATC+GGG | + | chr3_3:68017307-68017326 | Msa0466900:intron | 55.0% | |
ATGGAAGGAAGGGGAGGGGT+GGG | - | chr3_3:68010913-68010932 | None:intergenic | 60.0% | |
! | GGTGTGAGGCGGAAGCATGA+AGG | - | chr3_3:68010948-68010967 | None:intergenic | 60.0% |
! | GTGCAACCAGGTAGTGGTGG+TGG | + | chr3_3:68012044-68012063 | Msa0466900:CDS | 60.0% |
ACGACCTCCCACTGGCAGTT+TGG | - | chr3_3:68012094-68012113 | None:intergenic | 60.0% | |
!! | ACCATTGGGCAGGGCATTGG+TGG | + | chr3_3:68012574-68012593 | Msa0466900:CDS | 60.0% |
TCCACCAATGCCCTGCCCAA+TGG | - | chr3_3:68012578-68012597 | None:intergenic | 60.0% | |
AACCGGGAATCAGAGCAGGG+AGG | + | chr3_3:68013922-68013941 | Msa0466900:CDS | 60.0% | |
TGCCTCCCTGCTCTGATTCC+CGG | - | chr3_3:68013927-68013946 | None:intergenic | 60.0% | |
CTGCTCCCCAGATCTGCACA+AGG | - | chr3_3:68014227-68014246 | None:intergenic | 60.0% | |
CTTGTGCAGATCTGGGGAGC+AGG | + | chr3_3:68014225-68014244 | Msa0466900:intron | 60.0% | |
TGGGCCAGTTTCACCCCTTG+AGG | + | chr3_3:68014263-68014282 | Msa0466900:CDS | 60.0% | |
GTTAAGCTGGTCCCAAGGCC+AGG | - | chr3_3:68016100-68016119 | None:intergenic | 60.0% | |
CGAGCGTCTAGCGCCATACA+AGG | - | chr3_3:68016351-68016370 | None:intergenic | 60.0% | |
GAGTCTACGCAGGATCGGGA+GGG | + | chr3_3:68017311-68017330 | Msa0466900:intron | 60.0% | |
AGTCTACGCAGGATCGGGAG+GGG | + | chr3_3:68017312-68017331 | Msa0466900:intron | 60.0% | |
GAAGTAGGAGGGGGTGAGGG+TGG | - | chr3_3:68010886-68010905 | None:intergenic | 65.0% | |
CATGGAAGGAAGGGGAGGGG+TGG | - | chr3_3:68010914-68010933 | None:intergenic | 65.0% | |
GGGGAGCAGGTTTATGCGGC+TGG | + | chr3_3:68014238-68014257 | Msa0466900:CDS | 65.0% | |
CGAGTCTACGCAGGATCGGG+AGG | + | chr3_3:68017310-68017329 | Msa0466900:intron | 65.0% | |
GTCTACGCAGGATCGGGAGG+GGG | + | chr3_3:68017313-68017332 | Msa0466900:intron | 65.0% | |
TCTACGCAGGATCGGGAGGG+GGG | + | chr3_3:68017314-68017333 | Msa0466900:intron | 65.0% | |
CTACGCAGGATCGGGAGGGG+GGG | + | chr3_3:68017315-68017334 | Msa0466900:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_3 | gene | 68010653 | 68018046 | 68010653 | ID=Msa0466900;Name=Msa0466900 |
chr3_3 | mRNA | 68010653 | 68018046 | 68010653 | ID=Msa0466900-mRNA-1;Parent=Msa0466900;Name=Msa0466900-mRNA-1;_AED=0.10;_eAED=0.10;_QI=149|0.75|0.53|0.92|1|1|13|0|1037 |
chr3_3 | exon | 68010653 | 68010982 | 68010653 | ID=Msa0466900-mRNA-1:exon:15686;Parent=Msa0466900-mRNA-1 |
chr3_3 | exon | 68011088 | 68012755 | 68011088 | ID=Msa0466900-mRNA-1:exon:15687;Parent=Msa0466900-mRNA-1 |
chr3_3 | exon | 68012848 | 68012972 | 68012848 | ID=Msa0466900-mRNA-1:exon:15688;Parent=Msa0466900-mRNA-1 |
chr3_3 | exon | 68013084 | 68013232 | 68013084 | ID=Msa0466900-mRNA-1:exon:15689;Parent=Msa0466900-mRNA-1 |
chr3_3 | exon | 68013548 | 68013670 | 68013548 | ID=Msa0466900-mRNA-1:exon:15690;Parent=Msa0466900-mRNA-1 |
chr3_3 | exon | 68013775 | 68013972 | 68013775 | ID=Msa0466900-mRNA-1:exon:15691;Parent=Msa0466900-mRNA-1 |
chr3_3 | exon | 68014062 | 68014143 | 68014062 | ID=Msa0466900-mRNA-1:exon:15692;Parent=Msa0466900-mRNA-1 |
chr3_3 | exon | 68014234 | 68014284 | 68014234 | ID=Msa0466900-mRNA-1:exon:15693;Parent=Msa0466900-mRNA-1 |
chr3_3 | exon | 68014374 | 68014449 | 68014374 | ID=Msa0466900-mRNA-1:exon:15694;Parent=Msa0466900-mRNA-1 |
chr3_3 | exon | 68014544 | 68014655 | 68014544 | ID=Msa0466900-mRNA-1:exon:15695;Parent=Msa0466900-mRNA-1 |
chr3_3 | exon | 68014764 | 68014835 | 68014764 | ID=Msa0466900-mRNA-1:exon:15696;Parent=Msa0466900-mRNA-1 |
chr3_3 | exon | 68016364 | 68016559 | 68016364 | ID=Msa0466900-mRNA-1:exon:15697;Parent=Msa0466900-mRNA-1 |
chr3_3 | exon | 68017966 | 68018046 | 68017966 | ID=Msa0466900-mRNA-1:exon:15698;Parent=Msa0466900-mRNA-1 |
chr3_3 | five_prime_UTR | 68010653 | 68010801 | 68010653 | ID=Msa0466900-mRNA-1:five_prime_utr;Parent=Msa0466900-mRNA-1 |
chr3_3 | CDS | 68010802 | 68010982 | 68010802 | ID=Msa0466900-mRNA-1:cds;Parent=Msa0466900-mRNA-1 |
chr3_3 | CDS | 68011088 | 68012755 | 68011088 | ID=Msa0466900-mRNA-1:cds;Parent=Msa0466900-mRNA-1 |
chr3_3 | CDS | 68012848 | 68012972 | 68012848 | ID=Msa0466900-mRNA-1:cds;Parent=Msa0466900-mRNA-1 |
chr3_3 | CDS | 68013084 | 68013232 | 68013084 | ID=Msa0466900-mRNA-1:cds;Parent=Msa0466900-mRNA-1 |
chr3_3 | CDS | 68013548 | 68013670 | 68013548 | ID=Msa0466900-mRNA-1:cds;Parent=Msa0466900-mRNA-1 |
chr3_3 | CDS | 68013775 | 68013972 | 68013775 | ID=Msa0466900-mRNA-1:cds;Parent=Msa0466900-mRNA-1 |
chr3_3 | CDS | 68014062 | 68014143 | 68014062 | ID=Msa0466900-mRNA-1:cds;Parent=Msa0466900-mRNA-1 |
chr3_3 | CDS | 68014234 | 68014284 | 68014234 | ID=Msa0466900-mRNA-1:cds;Parent=Msa0466900-mRNA-1 |
chr3_3 | CDS | 68014374 | 68014449 | 68014374 | ID=Msa0466900-mRNA-1:cds;Parent=Msa0466900-mRNA-1 |
chr3_3 | CDS | 68014544 | 68014655 | 68014544 | ID=Msa0466900-mRNA-1:cds;Parent=Msa0466900-mRNA-1 |
chr3_3 | CDS | 68014764 | 68014835 | 68014764 | ID=Msa0466900-mRNA-1:cds;Parent=Msa0466900-mRNA-1 |
chr3_3 | CDS | 68016364 | 68016559 | 68016364 | ID=Msa0466900-mRNA-1:cds;Parent=Msa0466900-mRNA-1 |
chr3_3 | CDS | 68017966 | 68018046 | 68017966 | ID=Msa0466900-mRNA-1:cds;Parent=Msa0466900-mRNA-1 |
Gene Sequence |
Protein sequence |