AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0513620


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0513620 MtrunA17_Chr3g0121071 95.317 961 45 0 252 1212 106 1066 0.0 1907
Msa0513620 MtrunA17_Chr3g0121071 64.000 250 63 4 1 227 1 246 6.68e-76 273
Msa0513620 MtrunA17_Chr5g0421981 70.938 874 169 7 184 1056 46 835 0.0 1207
Msa0513620 MtrunA17_Chr5g0421981 58.333 192 49 4 66 255 2 164 1.20e-51 196
Msa0513620 MtrunA17_Chr6g0461811 80.781 333 52 2 543 874 4 325 0.0 561
Msa0513620 MtrunA17_Chr6g0461831 69.106 246 37 1 931 1176 12 218 5.80e-108 338
Msa0513620 MtrunA17_Chr6g0461821 87.879 66 8 0 874 939 22 87 5.59e-33 123
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0513620 AT5G01630.1 52.454 917 393 14 317 1212 258 1152 0.0 924
Msa0513620 AT4G00020.1 51.363 917 399 14 317 1212 258 1148 0.0 911
Msa0513620 AT4G00020.5 51.682 892 386 13 317 1189 258 1123 0.0 892
Msa0513620 AT4G00020.2 49.730 925 398 17 317 1210 258 1146 0.0 859
Msa0513620 AT4G00020.4 51.282 858 369 14 317 1151 258 1089 0.0 839
Msa0513620 AT4G00020.3 51.669 749 320 12 317 1046 258 983 0.0 742

Find 302 sgRNAs with CRISPR-Local

Find 568 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGTATTGATTTCCGATTAT+TGG 0.177850 3_4:+63885891 None:intergenic
AATATAACTCACATTTAATT+TGG 0.178578 3_4:+63886691 None:intergenic
GAGAAAGCTTTGAAAGATTC+TGG 0.189705 3_4:-63886576 Msa0513620:CDS
GGGAGGTCGTTATCTATTTC+TGG 0.198566 3_4:-63891136 Msa0513620:CDS
GTTAGAGCAAAGACGTTATT+AGG 0.201204 3_4:-63891841 Msa0513620:CDS
CAATTATCCTCTGGTGCTTC+TGG 0.202376 3_4:-63890384 Msa0513620:CDS
CTGGCAGTTTGGAATTTAAT+TGG 0.207082 3_4:+63891160 None:intergenic
AGGGTTTAACTAAGCAAATT+AGG 0.210571 3_4:+63892297 None:intergenic
ATTGCCTCATTTGCAGCTTA+TGG 0.211304 3_4:-63891299 Msa0513620:CDS
ATTGCCTCATTTGCAGCTTA+TGG 0.211304 3_4:-63891515 Msa0513620:CDS
ACAACAGATTGGAACTTAAT+TGG 0.219435 3_4:+63891376 None:intergenic
AGTTTACTTCTTCACATAAA+TGG 0.223688 3_4:-63888851 Msa0513620:CDS
GATTTCCGATTATTGGAAAA+TGG 0.239451 3_4:+63885898 None:intergenic
GCTTCTTGGTGATCCTGATT+TGG 0.254490 3_4:-63891089 Msa0513620:CDS
CTTCTTGGTGATCCTGATTT+GGG 0.261549 3_4:-63891088 Msa0513620:CDS
TGCCTCCCTGCTCTGATTCC+CGG 0.270037 3_4:+63889316 None:intergenic
GACTCACCTGCTTCTGTGTT+GGG 0.271516 3_4:+63886448 None:intergenic
TCAAGACGAACCTCGTTTAC+AGG 0.275730 3_4:-63891749 Msa0513620:CDS
GATTTGGGAGATTTCTTTGA+TGG 0.299751 3_4:-63891073 Msa0513620:CDS
CATATCTGCCATTAGGAATT+CGG 0.300492 3_4:+63886751 None:intergenic
TGTAAAGAATGGGATATATT+CGG 0.302175 3_4:+63888614 None:intergenic
TGACAATGGAACATCTAAAA+TGG 0.304206 3_4:+63889164 None:intergenic
ACTACACGCAACCTCATAAA+TGG 0.309834 3_4:+63886531 None:intergenic
TCCTTTGCATTAGAAGATAA+TGG 0.317935 3_4:+63886048 None:intergenic
CAGGCTGCTTATTATTTGTA+TGG 0.322115 3_4:+63890618 None:intergenic
AATGCAATAGATGATAGTTT+TGG 0.322409 3_4:-63891928 Msa0513620:CDS
AGGACCATACAAACCATATA+TGG 0.322671 3_4:-63885282 Msa0513620:CDS
GGTTCGCATATTTATGATTA+CGG 0.330430 3_4:-63886824 Msa0513620:CDS
ATCATTACAAATGGATTGTA+TGG 0.332897 3_4:-63889681 Msa0513620:CDS
TTACCTTTCTTTGTAAAGAA+TGG 0.343658 3_4:+63888603 None:intergenic
TTAAAAGTTAACAGGTCTTA+AGG 0.344117 3_4:-63884903 Msa0513620:three_prime_UTR
TGATACCTTGAGGTTGAAAA+AGG 0.344369 3_4:+63892058 None:intergenic
GGAATCAAATTTCAAATAAT+AGG 0.344969 3_4:+63885234 None:intergenic
CCGTAGATCCGGCAAGGTTA+TGG 0.348151 3_4:+63885532 None:intergenic
TTCTTGTTATACAAGGGTTT+CGG 0.353305 3_4:+63890761 None:intergenic
GCAGGTTTATGCGGCTGGAA+TGG 0.353377 3_4:-63888997 Msa0513620:CDS
AAAACCTCAAGGGGTGAAAC+TGG 0.358217 3_4:+63888973 None:intergenic
TGTCACCTGTCTGGCTGTAT+TGG 0.358302 3_4:+63890149 None:intergenic
TCACGTAGTTAAAAGTTAAC+AGG 0.359307 3_4:-63884911 Msa0513620:three_prime_UTR
ATCCCATTCTTTACAAAGAA+AGG 0.360000 3_4:-63888606 Msa0513620:intron
TAGCATCAGCAACCCATATA+TGG 0.360952 3_4:+63885269 None:intergenic
GTCACCAGAGGTAGAGATAT+TGG 0.362686 3_4:+63890532 None:intergenic
AAAATTGTGCAACCAGATAT+TGG 0.364051 3_4:-63891646 Msa0513620:CDS
AAACGCGCTAGGAGGCTTCT+TGG 0.367921 3_4:-63891103 Msa0513620:CDS
TAAAGTTGCTGGTCCACCTT+TGG 0.369700 3_4:-63888695 Msa0513620:CDS
TACCTTTCTTTGTAAAGAAT+GGG 0.373115 3_4:+63888604 None:intergenic
GGGTTTAACTAAGCAAATTA+GGG 0.377671 3_4:+63892298 None:intergenic
TTGGATAGTGAAATGGATAT+CGG 0.378756 3_4:+63890340 None:intergenic
GAATATTACTAACACCAGTT+TGG 0.382112 3_4:+63891581 None:intergenic
ACGACCTCCCACTGGCAGTT+TGG 0.385339 3_4:+63891149 None:intergenic
CAAATGGATTGTATGGAAAC+TGG 0.386415 3_4:-63889674 Msa0513620:CDS
CACTTCATTCTTGTTATACA+AGG 0.388000 3_4:+63890754 None:intergenic
CTGCTCTGATTCCCGGTTTG+TGG 0.390136 3_4:+63889323 None:intergenic
GTCACCTGTCTGGCTGTATT+GGG 0.390519 3_4:+63890150 None:intergenic
CGGTAATTGTTATCGGCGTC+GGG 0.391361 3_4:+63892201 None:intergenic
TTGCCACCGGTAATTGTTAT+CGG 0.392866 3_4:+63892194 None:intergenic
CCACTACGACTACCAATATC+TGG 0.393557 3_4:+63891634 None:intergenic
GGAGAAGCATATGCAATTGC+AGG 0.393974 3_4:-63886141 Msa0513620:CDS
ATGGACTGTCTTAACGGTAT+TGG 0.396758 3_4:+63890637 None:intergenic
ATTTGTATGGACTGTCTTAA+CGG 0.397845 3_4:+63890631 None:intergenic
TGTTGTAGATAATATTGTTT+CGG 0.407964 3_4:-63886867 Msa0513620:CDS
CATGGAAGGAAGGGGAGGGG+TGG 0.408337 3_4:+63892113 None:intergenic
CTTGTGCAGATCTGGGGAGC+AGG 0.412599 3_4:-63889015 Msa0513620:intron
GAATATTACTAACAACAGAT+TGG 0.415489 3_4:+63891365 None:intergenic
TCAAAGAAATCTCCCAAATC+AGG 0.416428 3_4:+63891076 None:intergenic
CCAATCAACCATAACCTTGC+CGG 0.418238 3_4:-63885540 Msa0513620:CDS
AATTCCTTGATGTGCATCCT+TGG 0.419461 3_4:+63890321 None:intergenic
TGTTTGTAGGACAGAAGCTT+CGG 0.420765 3_4:-63889119 Msa0513620:CDS
GTAAAGAATGGGATATATTC+GGG 0.420871 3_4:+63888615 None:intergenic
CCGGAGTCATATCTGCCATT+AGG 0.422638 3_4:+63886744 None:intergenic
ATGAATCATGATCAAACAAT+GGG 0.424139 3_4:+63885568 None:intergenic
CTCCGTGCTGTGTCAATAGA+TGG 0.427383 3_4:+63890055 None:intergenic
TTATACAAGGGTTTCGGTCC+AGG 0.427521 3_4:+63890767 None:intergenic
TGGTGATTGTAAAGCCTAGA+TGG 0.429640 3_4:-63885022 Msa0513620:exon
AATAATAAGCAGCCTGCTAG+TGG 0.430845 3_4:-63890611 Msa0513620:CDS
CAGGTTTATGCGGCTGGAAT+GGG 0.431824 3_4:-63888996 Msa0513620:CDS
GGGTCTTGAATCATTACAAA+TGG 0.432801 3_4:-63889690 Msa0513620:CDS
AGCTTCGCAACGAAGGTAAT+GGG 0.433487 3_4:-63890859 Msa0513620:CDS
CAACCCATATATGGTTTGTA+TGG 0.434022 3_4:+63885278 None:intergenic
TAATCGACAGGTAAAGTTGC+TGG 0.434418 3_4:-63888706 Msa0513620:intron
AAGAAGGCATAGTAACAATC+TGG 0.435277 3_4:-63886473 Msa0513620:CDS
TTGTCAAAGCAACTGGCTGC+TGG 0.435548 3_4:-63889147 Msa0513620:CDS
CGGTTTAGTACCTCAAACTT+TGG 0.436809 3_4:-63888647 Msa0513620:CDS
CCGACGCCGATAACAATTAC+CGG 0.438369 3_4:-63892200 Msa0513620:CDS
GCTTTGAAAGATTCTGGCCT+GGG 0.439971 3_4:-63886570 Msa0513620:CDS
ACCATTGGGCAGGGCATTGG+TGG 0.442677 3_4:-63890666 Msa0513620:CDS
CACAAACCGGGAATCAGAGC+AGG 0.445691 3_4:-63889322 Msa0513620:CDS
AGACTCACCTGCTTCTGTGT+TGG 0.448135 3_4:+63886447 None:intergenic
TGCTATCCAGCTAGGTGTGC+TGG 0.450035 3_4:-63889637 Msa0513620:CDS
GCATTATCTGAGCCACAAAC+CGG 0.451413 3_4:-63889335 Msa0513620:CDS
CCGGCAAGGTTATGGTTGAT+TGG 0.451913 3_4:+63885540 None:intergenic
TGTTCCATTGTCAAAGCAAC+TGG 0.452238 3_4:-63889154 Msa0513620:CDS
AAAACCATTGGGCAGGGCAT+TGG 0.452394 3_4:-63890669 Msa0513620:CDS
AAGCTTCGCAACGAAGGTAA+TGG 0.453729 3_4:-63890860 Msa0513620:CDS
TGGAACATATAGAGCTCATT+GGG 0.454267 3_4:-63888831 Msa0513620:CDS
CTGCCAGCTCCGTCAGAAGA+TGG 0.455648 3_4:-63885186 Msa0513620:CDS
GGCAAATAGACAGTCACAAA+TGG 0.456805 3_4:-63886610 Msa0513620:CDS
ATGGAACATATAGAGCTCAT+TGG 0.457747 3_4:-63888832 Msa0513620:CDS
ATTGCAGGACTCATACCATT+TGG 0.457860 3_4:-63886126 Msa0513620:CDS
TTAGTACCTCAAACTTTGGC+AGG 0.459938 3_4:-63888643 Msa0513620:CDS
GGGGTGGGAATAGAAGTAGG+AGG 0.461215 3_4:+63892129 None:intergenic
TTTGCAGCCTTCGAAACAAA+TGG 0.462337 3_4:-63890894 Msa0513620:CDS
TTTATGAGGTTGCGTGTAGT+TGG 0.466003 3_4:-63886528 Msa0513620:CDS
GAGTATCAGAAGGAAATAAC+TGG 0.466519 3_4:-63886845 Msa0513620:CDS
CAATGTAATTACCGTAGATC+CGG 0.466584 3_4:+63885521 None:intergenic
CATACCATTTGGCTCTGATT+CGG 0.466881 3_4:-63886115 Msa0513620:CDS
GTAATTCCTGCCAAAGTTTG+AGG 0.467704 3_4:+63888637 None:intergenic
GAGAAGTAACGCCATTTATG+AGG 0.467933 3_4:-63886542 Msa0513620:CDS
TTTAGTTGGTAGGTTGAACA+TGG 0.468541 3_4:-63891452 Msa0513620:CDS
GGTGGGAATAGAAGTAGGAG+GGG 0.468575 3_4:+63892131 None:intergenic
ATGGAAGGAAGGGGAGGGGT+GGG 0.469291 3_4:+63892114 None:intergenic
GGGGAGCAGGTTTATGCGGC+TGG 0.469394 3_4:-63889002 Msa0513620:CDS
TGCATCCTTGGATAGTGAAA+TGG 0.470058 3_4:+63890333 None:intergenic
ATTGTTACTATGCCTTCTTT+AGG 0.470118 3_4:+63886477 None:intergenic
ATTACCTGATGTCACCTGTC+TGG 0.470613 3_4:+63890140 None:intergenic
GCTGCTGGAAGATTGTTTGT+AGG 0.471023 3_4:-63889132 Msa0513620:CDS
ATATCTGCCATTAGGAATTC+GGG 0.471026 3_4:+63886752 None:intergenic
GAAAAGGTGTTGGGTATAGT+TGG 0.472509 3_4:-63885042 Msa0513620:CDS
GAGGATGGAGAGTAAAATGA+TGG 0.477162 3_4:-63888443 Msa0513620:CDS
ATTAAATTCCAAACTGCCAG+TGG 0.479529 3_4:-63891157 Msa0513620:CDS
CCGGTAATTGTTATCGGCGT+CGG 0.480036 3_4:+63892200 None:intergenic
AATAGAGAAACTCAAGGAAA+AGG 0.481279 3_4:-63885058 Msa0513620:CDS
TTAGTTGGTACGTTGAAGAA+TGG 0.482066 3_4:-63891235 Msa0513620:CDS
CGGAAATCAATACCATTGTC+AGG 0.483234 3_4:-63885883 Msa0513620:CDS
GTTTGTAGGACAGAAGCTTC+GGG 0.483618 3_4:-63889118 Msa0513620:intron
AGCCCATCTTCTGACGGAGC+TGG 0.484532 3_4:+63885183 None:intergenic
GATTTGGCTCAATTATCCTC+TGG 0.484666 3_4:-63890393 Msa0513620:CDS
CACGTGGAAAACCATTGGGC+AGG 0.486395 3_4:-63890676 Msa0513620:CDS
TCATTTCAAAGTCCTTTAGT+TGG 0.487907 3_4:-63891250 Msa0513620:CDS
TGCAGAACCCGAATTCCTAA+TGG 0.487970 3_4:-63886759 Msa0513620:CDS
AGCAGCCTGCTAGTGGGAAA+AGG 0.487997 3_4:-63890604 Msa0513620:CDS
AGCTTTGAAAGATTCTGGCC+TGG 0.488036 3_4:-63886571 Msa0513620:CDS
AAACTCAAGGAAAAGGTGTT+GGG 0.490315 3_4:-63885051 Msa0513620:CDS
GCTCATTGGGCAGATCGGTT+AGG 0.491199 3_4:-63888818 Msa0513620:CDS
AAAGTTACTATTTCTTCTAA+CGG 0.491582 3_4:-63891868 Msa0513620:CDS
TTTGATTTGATTTGATTTCG+AGG 0.494456 3_4:+63892277 None:intergenic
ATCATGAATGGGTTACAGTC+AGG 0.496675 3_4:-63885630 Msa0513620:CDS
GCTCCGATAAAATTCCAAAC+TGG 0.497788 3_4:-63891595 Msa0513620:CDS
GCCATTATCTTCTAATGCAA+AGG 0.497976 3_4:-63886049 Msa0513620:CDS
CCATAACCTTGCCGGATCTA+CGG 0.498113 3_4:-63885532 Msa0513620:intron
GGAGGGGTGGGAATAGAAGT+AGG 0.501265 3_4:+63892126 None:intergenic
CAATGGGGAGCAAAAGCAAA+TGG 0.502054 3_4:+63885584 None:intergenic
TTCTGAGGTGAGAACACTGT+GGG 0.503240 3_4:+63885212 None:intergenic
GAAAATTCCATTTGTTTCGA+AGG 0.503805 3_4:+63890887 None:intergenic
TTGATTTGATTTGATTTCGA+GGG 0.504270 3_4:+63892278 None:intergenic
GGATTCACGTGGAAAACCAT+TGG 0.504425 3_4:-63890681 Msa0513620:CDS
GTGTCATTTGATGTACCAAA+GGG 0.504965 3_4:+63890960 None:intergenic
GAAACTCAAGGAAAAGGTGT+TGG 0.504991 3_4:-63885052 Msa0513620:CDS
ATTTGTTGTGCATGTGGGAA+AGG 0.506609 3_4:-63885706 Msa0513620:CDS
GAATTTCTTACTTGGAAAGT+GGG 0.507846 3_4:+63885848 None:intergenic
TGCTTCTGGACTCAAAAGAA+AGG 0.512413 3_4:-63890370 Msa0513620:CDS
TTAAATTTCTTAGCATTCTG+AGG 0.512782 3_4:+63891781 None:intergenic
GGAATTTCTTACTTGGAAAG+TGG 0.513998 3_4:+63885847 None:intergenic
TTAAAAGTTGAATTAACTGA+TGG 0.514214 3_4:-63889293 Msa0513620:CDS
CTGGAACCCAACACAGAAGC+AGG 0.516002 3_4:-63886454 Msa0513620:intron
TTCTCCCAATACAGCCAGAC+AGG 0.517074 3_4:-63890154 Msa0513620:CDS
TTGGGAGATTTCTTTGATGG+TGG 0.517505 3_4:-63891070 Msa0513620:CDS
ACAGCCAGACAGGTGACATC+AGG 0.518455 3_4:-63890144 Msa0513620:CDS
GCTAGTGGGAAAAGGAGAAT+AGG 0.518525 3_4:-63890596 Msa0513620:CDS
GGCTAAGATATATAAGATGC+TGG 0.518921 3_4:-63886789 Msa0513620:CDS
CAGGTGACATCAGGTAATGC+AGG 0.519570 3_4:-63890135 Msa0513620:CDS
ACTTTGAAACGACGCAGCAC+TGG 0.520218 3_4:+63891705 None:intergenic
ACCATCAAGAAAATTCTTGA+GGG 0.521881 3_4:-63889431 Msa0513620:CDS
CTACGCACTCACTCTTCTCC+CGG 0.522137 3_4:+63892371 None:intergenic
GGGTGGGAATAGAAGTAGGA+GGG 0.522833 3_4:+63892130 None:intergenic
GCAAAAGAACTAAGTTGCTC+CGG 0.523062 3_4:+63886725 None:intergenic
ATTTCCAATATCTCTACCTC+TGG 0.523225 3_4:-63890536 Msa0513620:CDS
GTGCATAGTGGTAGTGTTAG+TGG 0.525584 3_4:-63891412 Msa0513620:CDS
CTATCCATAAGCTGCAAATG+AGG 0.526428 3_4:+63891295 None:intergenic
CTATCCATAAGCTGCAAATG+AGG 0.526428 3_4:+63891511 None:intergenic
TGGATAGTGAAATGGATATC+GGG 0.526457 3_4:+63890341 None:intergenic
GCAGCCAGTTGCTTTGACAA+TGG 0.526991 3_4:+63889150 None:intergenic
GTACATGGAAGGAAGGGGAG+GGG 0.527310 3_4:+63892110 None:intergenic
CAGAGAGTCATCATTGAAGA+AGG 0.529558 3_4:+63889398 None:intergenic
TTTATGCATTTGAAAGCCAA+AGG 0.530660 3_4:+63888679 None:intergenic
GATTCACGTGGAAAACCATT+GGG 0.530690 3_4:-63890680 Msa0513620:CDS
CTGATCATGTGCTTGACAGT+GGG 0.531781 3_4:-63889358 Msa0513620:CDS
CAACGAGATAAGCCTAAAGA+AGG 0.531883 3_4:-63886489 Msa0513620:CDS
AACAGAGGAAGTGATTGTGC+TGG 0.533610 3_4:+63891012 None:intergenic
AAGTTGAATTAACTGATGGA+TGG 0.535731 3_4:-63889289 Msa0513620:intron
TTCAAAGTCCTTTAGTTGGT+AGG 0.535790 3_4:-63891462 Msa0513620:CDS
ATTGGTAGTCGTAGTGGTGC+TGG 0.536017 3_4:-63891628 Msa0513620:CDS
TGGCTCTGATAGTAATGGTA+TGG 0.536135 3_4:-63890094 Msa0513620:CDS
GTGGGAATAGAAGTAGGAGG+GGG 0.536151 3_4:+63892132 None:intergenic
TTTGTTTCGAAGGCTGCAAA+GGG 0.537403 3_4:+63890897 None:intergenic
TGGGCCAGTTTCACCCCTTG+AGG 0.537797 3_4:-63888977 Msa0513620:intron
CATTACTATCAGAGCCATCA+TGG 0.538675 3_4:+63890100 None:intergenic
CATGATGGCTCTGATAGTAA+TGG 0.539102 3_4:-63890099 Msa0513620:CDS
CTTGTATGGCGCTAGACGCT+CGG 0.539469 3_4:-63886891 Msa0513620:intron
CAAGTCAGCAAAAGAAGCAA+TGG 0.541240 3_4:-63885674 Msa0513620:CDS
ACTGATGGATCCATCATGAA+TGG 0.542358 3_4:-63885642 Msa0513620:CDS
TGATGGAGCTGCACAATCAA+AGG 0.543075 3_4:-63888426 Msa0513620:intron
TGTTGCATTTGTTGTGCATG+TGG 0.544406 3_4:-63885712 Msa0513620:CDS
TCAAATAAGCTTCGCAACGA+AGG 0.544748 3_4:-63890866 Msa0513620:CDS
ATTTGTTTCGAAGGCTGCAA+AGG 0.544759 3_4:+63890896 None:intergenic
GGACCATACAAACCATATAT+GGG 0.545077 3_4:-63885281 Msa0513620:CDS
TTCTTCAACGTACCAACTAA+AGG 0.545451 3_4:+63891238 None:intergenic
TGTTGTAATATCAGAGAGGA+TGG 0.546484 3_4:-63888458 Msa0513620:CDS
TTAGCACCACCACCACTACC+TGG 0.547242 3_4:+63891190 None:intergenic
TATGAAAGAGAAGTGAATCA+TGG 0.547598 3_4:-63889464 Msa0513620:CDS
TTAGTTAGTAGATCGAAAAG+TGG 0.547945 3_4:-63891679 Msa0513620:CDS
GCAAGGTTATGGTTGATTGG+TGG 0.548799 3_4:+63885543 None:intergenic
GTGCAACCAGGTAGTGGTGG+TGG 0.549195 3_4:-63891196 Msa0513620:CDS
AAATTTGTGCAACCAGGTAG+TGG 0.550143 3_4:-63891202 Msa0513620:CDS
AATGAATCATGATCAAACAA+TGG 0.551098 3_4:+63885567 None:intergenic
GAAGATCGTACATGGAAGGA+AGG 0.551575 3_4:+63892103 None:intergenic
TATGATTACGGCAATAGCGA+AGG 0.551854 3_4:-63886812 Msa0513620:CDS
ATGTTCAACCTACCAACTAA+AGG 0.553197 3_4:+63891454 None:intergenic
ATGGGCTAGCAATTCGAGCT+TGG 0.554921 3_4:-63885167 Msa0513620:intron
AAGATCGTACATGGAAGGAA+GGG 0.555599 3_4:+63892104 None:intergenic
GTAGAGATATTGGAAATTCG+AGG 0.556021 3_4:+63890542 None:intergenic
TAACTACGTGAATGTTGTCA+TGG 0.557349 3_4:+63884923 None:intergenic
TCTGATCATGTGCTTGACAG+TGG 0.559826 3_4:-63889359 Msa0513620:CDS
TCGTTTCAAAGTCCTTTAGT+TGG 0.562899 3_4:-63891466 Msa0513620:CDS
ATCTGGGGAGCAGGTTTATG+CGG 0.563462 3_4:-63889006 Msa0513620:CDS
TGGTAGTGTTAGTGGTGCTA+AGG 0.563632 3_4:-63891404 Msa0513620:CDS
GATATCCATTTCACTATCCA+AGG 0.565174 3_4:-63890338 Msa0513620:CDS
GCGTTACTTCTCTGTCTCCC+AGG 0.565373 3_4:+63886553 None:intergenic
CTGATGGATCCATCATGAAT+GGG 0.565485 3_4:-63885641 Msa0513620:CDS
TGCCAGCTCCGTCAGAAGAT+GGG 0.565816 3_4:-63885185 Msa0513620:CDS
TACCATCAAGAAAATTCTTG+AGG 0.566360 3_4:-63889432 Msa0513620:CDS
CGTACATGGAAGGAAGGGGA+GGG 0.566520 3_4:+63892109 None:intergenic
TAAATGTAAATTTCATCGAA+AGG 0.567698 3_4:-63884832 Msa0513620:three_prime_UTR
ATGATTACGGCAATAGCGAA+GGG 0.568939 3_4:-63886811 Msa0513620:CDS
TCCACCAATGCCCTGCCCAA+TGG 0.570333 3_4:+63890665 None:intergenic
GTTGCATTTGTTGTGCATGT+GGG 0.571683 3_4:-63885711 Msa0513620:CDS
CATAAAAGTAGCAAAGCTCC+TGG 0.572073 3_4:-63890785 Msa0513620:CDS
TGCTTGAGGAACTGAAGTAC+AGG 0.575597 3_4:-63889591 Msa0513620:intron
CATTATCTGAGCCACAAACC+GGG 0.576494 3_4:-63889334 Msa0513620:CDS
GTCCTTCACTTGCAGACTAG+AGG 0.577647 3_4:-63886090 Msa0513620:CDS
TGACTGTAACCCATTCATGA+TGG 0.578512 3_4:+63885632 None:intergenic
AATTGTTATCGGCGTCGGGG+AGG 0.578824 3_4:+63892205 None:intergenic
ATCCTCTAGTCTGCAAGTGA+AGG 0.580814 3_4:+63886088 None:intergenic
CTTGTATAACAAGAATGAAG+TGG 0.581521 3_4:-63890753 Msa0513620:CDS
ATATTCCTTGTGCAGATCTG+GGG 0.583597 3_4:-63889021 Msa0513620:intron
AGAAGATAATGGCAACCACT+TGG 0.584421 3_4:+63886059 None:intergenic
TATTGTTTCGGAGTATCAGA+AGG 0.586541 3_4:-63886855 Msa0513620:CDS
AGATCGTACATGGAAGGAAG+GGG 0.587741 3_4:+63892105 None:intergenic
TCGTACATGGAAGGAAGGGG+AGG 0.589194 3_4:+63892108 None:intergenic
CTATCCAAGGATGCACATCA+AGG 0.589712 3_4:-63890325 Msa0513620:CDS
CCAGATATTGGTAGTCGTAG+TGG 0.590325 3_4:-63891634 Msa0513620:CDS
CGGAGCTGGCAGCATTTCTG+AGG 0.590348 3_4:+63885197 None:intergenic
GAGAATAAAGTTGTGCATAG+TGG 0.590470 3_4:-63891424 Msa0513620:CDS
GACTGTATCAAACGTGCTTG+AGG 0.593902 3_4:-63889605 Msa0513620:CDS
AATAGATAACGACCTCCCAC+TGG 0.595561 3_4:+63891141 None:intergenic
AGTGTCATTTGATGTACCAA+AGG 0.597531 3_4:+63890959 None:intergenic
ATAATAAGCAGCCTGCTAGT+GGG 0.598295 3_4:-63890610 Msa0513620:CDS
GAGAGTAAATTTGTGCAACC+AGG 0.600163 3_4:-63891208 Msa0513620:CDS
CGTCGGAGTTGATTTGCCAC+CGG 0.600580 3_4:+63892181 None:intergenic
ATGAGAGATGCTATCCAGCT+AGG 0.600663 3_4:-63889645 Msa0513620:CDS
ACGTGGAAAACCATTGGGCA+GGG 0.603971 3_4:-63890675 Msa0513620:CDS
GCCTAGATGGAGAAAAGAGG+AGG 0.605534 3_4:-63885009 Msa0513620:exon
TTAGTTGGTAGGTTGAACAT+GGG 0.606230 3_4:-63891451 Msa0513620:CDS
AGGAGAAGATCGTACATGGA+AGG 0.606968 3_4:+63892099 None:intergenic
ATAGAGCTCATTGGGCAGAT+CGG 0.606980 3_4:-63888823 Msa0513620:CDS
ACATCCGAATCAGAGCCAAA+TGG 0.607036 3_4:+63886111 None:intergenic
GAGAAGTGAATCATGGCCAC+CGG 0.607775 3_4:-63889457 Msa0513620:CDS
ATCCATCTATTGACACAGCA+CGG 0.609149 3_4:-63890057 Msa0513620:CDS
ATGCATTTGAAAGCCAAAGG+TGG 0.609685 3_4:+63888682 None:intergenic
GTGATGCGTTGAAACGCGCT+AGG 0.611592 3_4:-63891114 Msa0513620:CDS
CCTTATATTAGGTTAAGCAG+TGG 0.612044 3_4:-63888487 Msa0513620:intron
ACTTCATTCTTGTTATACAA+GGG 0.612276 3_4:+63890755 None:intergenic
ATGAAGGAGAAGATCGTACA+TGG 0.614402 3_4:+63892095 None:intergenic
GGCTCTGATAGTAATGGTAT+GGG 0.615727 3_4:-63890093 Msa0513620:CDS
GCAGATAATAGAGAAACTCA+AGG 0.622491 3_4:-63885064 Msa0513620:intron
AAAGCCTAGATGGAGAAAAG+AGG 0.623072 3_4:-63885012 Msa0513620:exon
TTTGAGTCCAGAAGCACCAG+AGG 0.625357 3_4:+63890377 None:intergenic
CATCAAGAAAATTCTTGAGG+GGG 0.625750 3_4:-63889429 Msa0513620:CDS
ATGCGTTGAAACGCGCTAGG+AGG 0.627260 3_4:-63891111 Msa0513620:CDS
GGTGTGAGGCGGAAGCATGA+AGG 0.627960 3_4:+63892079 None:intergenic
AATAACATTTGAAGTGTCGT+CGG 0.629896 3_4:+63892164 None:intergenic
GGAGCGTACATATTCCATGA+TGG 0.630123 3_4:-63890114 Msa0513620:CDS
CCATCAAGAAAATTCTTGAG+GGG 0.633200 3_4:-63889430 Msa0513620:CDS
CTATCTATTACCTGTAAACG+AGG 0.635769 3_4:+63891739 None:intergenic
ATTGCTAGCCCATCTTCTGA+CGG 0.636898 3_4:+63885177 None:intergenic
CCTAATGGCAGATATGACTC+CGG 0.636920 3_4:-63886744 Msa0513620:CDS
ATAGCGTCAGGAACTGTCAG+AGG 0.638897 3_4:-63886163 Msa0513620:intron
ACAAACCGGGAATCAGAGCA+GGG 0.642447 3_4:-63889321 Msa0513620:CDS
TAATTACCGTAGATCCGGCA+AGG 0.642794 3_4:+63885526 None:intergenic
TCTTCAAGAATGGATTCACG+TGG 0.644634 3_4:-63890692 Msa0513620:CDS
TGATCATGTGCTTGACAGTG+GGG 0.648137 3_4:-63889357 Msa0513620:CDS
ACTCTCACTTCTTTCAACAG+AGG 0.651704 3_4:+63890997 None:intergenic
TTGAACATCTTGGTCACCAG+AGG 0.654410 3_4:+63890520 None:intergenic
TAGCGTCAGGAACTGTCAGA+GGG 0.654518 3_4:-63886162 Msa0513620:CDS
AATTCCAAACTGCCAGTGGG+AGG 0.664894 3_4:-63891153 Msa0513620:CDS
TTAAATTCCAAACTGCCAGT+GGG 0.666155 3_4:-63891156 Msa0513620:CDS
TGATTACGGCAATAGCGAAG+GGG 0.679687 3_4:-63886810 Msa0513620:CDS
GTTGTGAATGAAAGTGATTG+TGG 0.680825 3_4:-63890809 Msa0513620:CDS
GGTAATTGTTATCGGCGTCG+GGG 0.682486 3_4:+63892202 None:intergenic
CTAGAGGATCTACTACCAAG+TGG 0.692702 3_4:-63886074 Msa0513620:CDS
GGATTGCATGAAGAAACTGT+TGG 0.692759 3_4:-63891820 Msa0513620:CDS
ATGTCACTCAGACCTGACAA+TGG 0.698274 3_4:+63885871 None:intergenic
TTTGTGCAACCAGGTAGTGG+TGG 0.698341 3_4:-63891199 Msa0513620:CDS
TAAAGGACTTTGAAATGACG+CGG 0.698771 3_4:+63891255 None:intergenic
GAATCGAAGAAATGTCAACA+TGG 0.699408 3_4:-63892233 Msa0513620:exon
TTTCTGAGGTGAGAACACTG+TGG 0.717998 3_4:+63885211 None:intergenic
TGAATCATGATCAAACAATG+GGG 0.725399 3_4:+63885569 None:intergenic
ACGCCGATAACAATTACCGG+TGG 0.728353 3_4:-63892197 Msa0513620:CDS
AATCTGTTGTAATATCAGAG+AGG 0.730566 3_4:-63888462 Msa0513620:CDS
TGTCATTTGATGTACCAAAG+GGG 0.741422 3_4:+63890961 None:intergenic
AACCGGGAATCAGAGCAGGG+AGG 0.760357 3_4:-63889318 Msa0513620:CDS
TCTGAGGTGAGAACACTGTG+GGG 0.762439 3_4:+63885213 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAGAAAAATGAAATAATA+AGG + chr3_4:63885175-63885194 None:intergenic 10.0%
!! AAATATAGAAGAAAAAAAAA+TGG + chr3_4:63889850-63889869 None:intergenic 10.0%
!!! ATTTTTATCTCATATAAATT+CGG + chr3_4:63889974-63889993 None:intergenic 10.0%
!! AATTTATATGAGATAAAAAT+AGG - chr3_4:63889974-63889993 Msa0513620:intron 10.0%
!! ATAATTATTCAATATTAATG+AGG + chr3_4:63890006-63890025 None:intergenic 10.0%
!! TTGAATAATTATATAATTGA+TGG - chr3_4:63890014-63890033 Msa0513620:intron 10.0%
!!! AATTATTTTAATTCTTCAAA+AGG + chr3_4:63892330-63892349 None:intergenic 10.0%
!!! TGAAGAATTAAAATAATTTT+TGG - chr3_4:63892332-63892351 Msa0513620:five_prime_UTR 10.0%
!! TGTGGTTAAATTTAATAATT+TGG - chr3_4:63887368-63887387 Msa0513620:intron 15.0%
!!! AAAAGCCAATTAAATATTTT+AGG - chr3_4:63887672-63887691 Msa0513620:intron 15.0%
!!! AATATCATTGTTAGTTTAAA+AGG + chr3_4:63887698-63887717 None:intergenic 15.0%
!!! TCTGAAATTTATTTTTAGTT+TGG + chr3_4:63889544-63889563 None:intergenic 15.0%
!!! TTTTTATCTCATATAAATTC+GGG + chr3_4:63889973-63889992 None:intergenic 15.0%
!! ACAAACAAAATTCATATTAA+CGG + chr3_4:63890267-63890286 None:intergenic 15.0%
!! AATATAACTCACATTTAATT+TGG + chr3_4:63890505-63890524 None:intergenic 15.0%
!!! ATAAATTTTCAGCATTTTTA+TGG - chr3_4:63890810-63890829 Msa0513620:CDS 15.0%
!!! AAGAAAAAACATTTAAGATA+AGG + chr3_4:63890921-63890940 None:intergenic 15.0%
!! TAATCTTATAAAAAAAGAGA+AGG - chr3_4:63891891-63891910 Msa0513620:CDS 15.0%
!!! AAGTGTATTTATTTTTGTAG+AGG - chr3_4:63885237-63885256 Msa0513620:CDS 20.0%
!!! AAAGTTACTATTTCTTCTAA+CGG - chr3_4:63885325-63885344 Msa0513620:intron 20.0%
!! ATAAAAAGTTCTTCATTGAA+TGG - chr3_4:63886474-63886493 Msa0513620:CDS 20.0%
!! TAGAAAAATATTGAACATCT+TGG + chr3_4:63886686-63886705 None:intergenic 20.0%
!!! GATGTTCAATATTTTTCTAA+TGG - chr3_4:63886687-63886706 Msa0513620:intron 20.0%
!!! TACATTTCTTTCACTTTTAT+TGG - chr3_4:63886734-63886753 Msa0513620:CDS 20.0%
!!! TTTTTAATGTATATGATGCA+AGG - chr3_4:63887260-63887279 Msa0513620:intron 20.0%
!! ATTATTAAATTTAACCACAG+AGG + chr3_4:63887367-63887386 None:intergenic 20.0%
!! GGTTAAATTTAATAATTTGG+CGG - chr3_4:63887371-63887390 Msa0513620:intron 20.0%
!!! TTGCTTAAACATCATATTTT+AGG - chr3_4:63887632-63887651 Msa0513620:intron 20.0%
!! AAAGGCCTAAAATATTTAAT+TGG + chr3_4:63887680-63887699 None:intergenic 20.0%
!! TTAAAAGTTGAATTAACTGA+TGG - chr3_4:63887900-63887919 Msa0513620:intron 20.0%
!! CTATGATTTCAAAATATAAG+AGG - chr3_4:63887957-63887976 Msa0513620:intron 20.0%
!!! TCAAATTCTGCTATATTTTT+AGG - chr3_4:63888305-63888324 Msa0513620:intron 20.0%
!! TTCAAATGCATAAAAAGAAA+TGG - chr3_4:63888523-63888542 Msa0513620:intron 20.0%
!!! GAAAATAGTTCTTAATTTTC+TGG + chr3_4:63888687-63888706 None:intergenic 20.0%
!!! AGAACTATTTTCCTTATATT+AGG - chr3_4:63888695-63888714 Msa0513620:CDS 20.0%
!! GTATTAACATTAAAATAAGC+AGG + chr3_4:63889273-63889292 None:intergenic 20.0%
!! TTATAAATATTCCAGAAGAA+AGG - chr3_4:63889495-63889514 Msa0513620:intron 20.0%
!!! TGGTTTTGTATATTTATGAT+AGG - chr3_4:63889656-63889675 Msa0513620:CDS 20.0%
!! ACTTAATAAGTCATTTAGTT+AGG - chr3_4:63889712-63889731 Msa0513620:intron 20.0%
!! CTTAATAAGTCATTTAGTTA+GGG - chr3_4:63889713-63889732 Msa0513620:intron 20.0%
!! GAAAAAAAAATGGTGTTTAT+TGG + chr3_4:63889840-63889859 None:intergenic 20.0%
!! ATATGAGATAAAAATAGGAA+AGG - chr3_4:63889979-63889998 Msa0513620:intron 20.0%
!!! TATATAATTGATGGCTATAT+AGG - chr3_4:63890023-63890042 Msa0513620:intron 20.0%
!!! ATATAATTGATGGCTATATA+GGG - chr3_4:63890024-63890043 Msa0513620:intron 20.0%
!! TGTTGTAGATAATATTGTTT+CGG - chr3_4:63890326-63890345 Msa0513620:CDS 20.0%
!! TATATGTAGAAAGATACTTA+TGG - chr3_4:63890543-63890562 Msa0513620:CDS 20.0%
!! AAACATTTAAGAAAAGGAAT+TGG + chr3_4:63890949-63890968 None:intergenic 20.0%
!! TGTGATAAACATTTAAGAAA+AGG + chr3_4:63890955-63890974 None:intergenic 20.0%
!! AAAGATAATTTCTATCTACT+TGG - chr3_4:63891219-63891238 Msa0513620:CDS 20.0%
!!! TGATTCAATTATGTTGTTTT+AGG - chr3_4:63891780-63891799 Msa0513620:CDS 20.0%
!! TATCTGAATTAATGCAAAAT+AGG + chr3_4:63891828-63891847 None:intergenic 20.0%
!! GGAATCAAATTTCAAATAAT+AGG + chr3_4:63891962-63891981 None:intergenic 20.0%
!! TAAATGTAAATTTCATCGAA+AGG - chr3_4:63892361-63892380 Msa0513620:five_prime_UTR 20.0%
!!! AATTAGGGATTCGATTTTTT+GGG + chr3_4:63884883-63884902 None:intergenic 25.0%
!!! AAATTAGGGATTCGATTTTT+TGG + chr3_4:63884884-63884903 None:intergenic 25.0%
!!! TTGATTTGATTTGATTTCGA+GGG + chr3_4:63884918-63884937 None:intergenic 25.0%
!!! TTTGATTTGATTTGATTTCG+AGG + chr3_4:63884919-63884938 None:intergenic 25.0%
!! AATGCAATAGATGATAGTTT+TGG - chr3_4:63885265-63885284 Msa0513620:CDS 25.0%
! TTAAATTTCTTAGCATTCTG+AGG + chr3_4:63885415-63885434 None:intergenic 25.0%
! GAATATTACTAACAACAGAT+TGG + chr3_4:63885831-63885850 None:intergenic 25.0%
!! AAACTTTTTGTCATGTGATT+GGG + chr3_4:63886270-63886289 None:intergenic 25.0%
!! ACTTCATTCTTGTTATACAA+GGG + chr3_4:63886441-63886460 None:intergenic 25.0%
!! TATTTTTCTAATGGTATGCA+TGG - chr3_4:63886696-63886715 Msa0513620:intron 25.0%
! TATGTGTGATTCTTAAGATT+TGG - chr3_4:63886784-63886803 Msa0513620:CDS 25.0%
! ATTGTTATGTGAATGATAAG+AGG - chr3_4:63887340-63887359 Msa0513620:intron 25.0%
!!! ATCATTACAAATGGATTGTA+TGG - chr3_4:63887512-63887531 Msa0513620:intron 25.0%
! GTAAGATAGACAATAAAAAC+AGG + chr3_4:63888112-63888131 None:intergenic 25.0%
! ATTGTCTATCTTACTTAGTA+CGG - chr3_4:63888118-63888137 Msa0513620:intron 25.0%
! ATTATGATTGAGTATTTGTG+TGG - chr3_4:63888256-63888275 Msa0513620:intron 25.0%
! AGTTTACTTCTTCACATAAA+TGG - chr3_4:63888342-63888361 Msa0513620:intron 25.0%
! AAATGCATAAAAAGAAATGG+CGG - chr3_4:63888526-63888545 Msa0513620:intron 25.0%
! TGTAAAGAATGGGATATATT+CGG + chr3_4:63888582-63888601 None:intergenic 25.0%
! TACCTTTCTTTGTAAAGAAT+GGG + chr3_4:63888592-63888611 None:intergenic 25.0%
! TTACCTTTCTTTGTAAAGAA+TGG + chr3_4:63888593-63888612 None:intergenic 25.0%
! ACTTCTTATATTCATAAGCT+GGG - chr3_4:63888792-63888811 Msa0513620:intron 25.0%
! AATATTCACATCAGACAAAA+AGG + chr3_4:63888849-63888868 None:intergenic 25.0%
! AGACTATATTGCAAATTATC+TGG - chr3_4:63888934-63888953 Msa0513620:intron 25.0%
! TTAGATTCTGCAGAAAATTA+TGG - chr3_4:63889006-63889025 Msa0513620:CDS 25.0%
! AGTACTTGTTCATAGAAATA+AGG + chr3_4:63889153-63889172 None:intergenic 25.0%
!! TATTTCTATGAACAAGTACT+TGG - chr3_4:63889153-63889172 Msa0513620:CDS 25.0%
! TCAACATCATCATCTTTATA+AGG - chr3_4:63889230-63889249 Msa0513620:intron 25.0%
! TCATCATCTTTATAAGGTAT+TGG - chr3_4:63889236-63889255 Msa0513620:intron 25.0%
!! CATCATCTTTATAAGGTATT+GGG - chr3_4:63889237-63889256 Msa0513620:intron 25.0%
! ATGAATAGTATCATAATCCT+TGG + chr3_4:63889339-63889358 None:intergenic 25.0%
! AGGATTATGATACTATTCAT+TGG - chr3_4:63889339-63889358 Msa0513620:CDS 25.0%
! GGATTATGATACTATTCATT+GGG - chr3_4:63889340-63889359 Msa0513620:CDS 25.0%
! AATTAGCTAACAATAAGAAC+AGG - chr3_4:63889386-63889405 Msa0513620:CDS 25.0%
! AAAATTTGACCAAAGTCAAA+AGG - chr3_4:63889446-63889465 Msa0513620:CDS 25.0%
! AAATTTGACCAAAGTCAAAA+GGG - chr3_4:63889447-63889466 Msa0513620:CDS 25.0%
! CAGAAACTATAAATAGGATT+TGG + chr3_4:63889623-63889642 None:intergenic 25.0%
! AATATACAAAACCATCTGTA+AGG + chr3_4:63889650-63889669 None:intergenic 25.0%
!! ATTTTGTTCTATTTCCTATC+AGG - chr3_4:63889866-63889885 Msa0513620:intron 25.0%
!!! TAAAAACCTGATCATTTTTC+GGG + chr3_4:63890217-63890236 None:intergenic 25.0%
!!! GTAAAAACCTGATCATTTTT+CGG + chr3_4:63890218-63890237 None:intergenic 25.0%
!! AAACATTTAAGATAAGGTAC+TGG + chr3_4:63890915-63890934 None:intergenic 25.0%
! GCTGTATAAGAATAATAACA+AGG + chr3_4:63891450-63891469 None:intergenic 25.0%
! ATGAATCATGATCAAACAAT+GGG + chr3_4:63891628-63891647 None:intergenic 25.0%
! AATGAATCATGATCAAACAA+TGG + chr3_4:63891629-63891648 None:intergenic 25.0%
! TGAATCATGATCAATCAATA+GGG + chr3_4:63891767-63891786 None:intergenic 25.0%
! TTGAATCATGATCAATCAAT+AGG + chr3_4:63891768-63891787 None:intergenic 25.0%
! TTAAAAGTTAACAGGTCTTA+AGG - chr3_4:63892290-63892309 Msa0513620:five_prime_UTR 25.0%
GGGTTTAACTAAGCAAATTA+GGG + chr3_4:63884898-63884917 None:intergenic 30.0%
AGGGTTTAACTAAGCAAATT+AGG + chr3_4:63884899-63884918 None:intergenic 30.0%
!! AATAACATTTGAAGTGTCGT+CGG + chr3_4:63885032-63885051 None:intergenic 30.0%
TGAATGAAAATGATACCTTG+AGG + chr3_4:63885148-63885167 None:intergenic 30.0%
! CTTTTCGATCTACTAACTAA+AGG + chr3_4:63885514-63885533 None:intergenic 30.0%
TTAGTTAGTAGATCGAAAAG+TGG - chr3_4:63885514-63885533 Msa0513620:intron 30.0%
AAAATTGTGCAACCAGATAT+TGG - chr3_4:63885547-63885566 Msa0513620:CDS 30.0%
!! ACACCAGTTTGGAATTTTAT+CGG + chr3_4:63885604-63885623 None:intergenic 30.0%
GAATATTACTAACACCAGTT+TGG + chr3_4:63885615-63885634 None:intergenic 30.0%
AAAAAAACTAGCATTCTGAG+GGG + chr3_4:63885641-63885660 None:intergenic 30.0%
CAAAAAAACTAGCATTCTGA+GGG + chr3_4:63885642-63885661 None:intergenic 30.0%
TCAAAAAAACTAGCATTCTG+AGG + chr3_4:63885643-63885662 None:intergenic 30.0%
ACAACAGATTGGAACTTAAT+TGG + chr3_4:63885820-63885839 None:intergenic 30.0%
TCATTTCAAAGTCCTTTAGT+TGG - chr3_4:63885943-63885962 Msa0513620:intron 30.0%
TAAAAATACTCATACCCCTT+TGG - chr3_4:63886218-63886237 Msa0513620:intron 30.0%
! GAAACTTTTTGTCATGTGAT+TGG + chr3_4:63886271-63886290 None:intergenic 30.0%
GAAAATTCCATTTGTTTCGA+AGG + chr3_4:63886309-63886328 None:intergenic 30.0%
! TTCTTGTTATACAAGGGTTT+CGG + chr3_4:63886435-63886454 None:intergenic 30.0%
! CACTTCATTCTTGTTATACA+AGG + chr3_4:63886442-63886461 None:intergenic 30.0%
CTTGTATAACAAGAATGAAG+TGG - chr3_4:63886440-63886459 Msa0513620:intron 30.0%
! GAATGGTTTTTCTTCAAGAA+TGG - chr3_4:63886491-63886510 Msa0513620:CDS 30.0%
! ATTTGTATGGACTGTCTTAA+CGG + chr3_4:63886565-63886584 None:intergenic 30.0%
TTGGATAGTGAAATGGATAT+CGG + chr3_4:63886856-63886875 None:intergenic 30.0%
! TGCTGCAACAAATTTCATTT+TGG + chr3_4:63887019-63887038 None:intergenic 30.0%
TTTAATAATTTGGCGGAGTT+TGG - chr3_4:63887378-63887397 Msa0513620:intron 30.0%
!!! TTCTTTTGCCTAGTCTTAAT+TGG - chr3_4:63887445-63887464 Msa0513620:intron 30.0%
TTCACTTCTCTTTCATATCT+AGG + chr3_4:63887726-63887745 None:intergenic 30.0%
TATGAAAGAGAAGTGAATCA+TGG - chr3_4:63887729-63887748 Msa0513620:intron 30.0%
TACCATCAAGAAAATTCTTG+AGG - chr3_4:63887761-63887780 Msa0513620:intron 30.0%
ACCATCAAGAAAATTCTTGA+GGG - chr3_4:63887762-63887781 Msa0513620:intron 30.0%
AAGTTGAATTAACTGATGGA+TGG - chr3_4:63887904-63887923 Msa0513620:intron 30.0%
AGGAAAATACTTTATGTCCA+GGG + chr3_4:63887985-63888004 None:intergenic 30.0%
AAGGAAAATACTTTATGTCC+AGG + chr3_4:63887986-63888005 None:intergenic 30.0%
! AAGTATTTTCCTTTTTCTGC+AGG - chr3_4:63887993-63888012 Msa0513620:intron 30.0%
TATAGAATACCTGCAGAAAA+AGG + chr3_4:63888005-63888024 None:intergenic 30.0%
TGACAATGGAACATCTAAAA+TGG + chr3_4:63888032-63888051 None:intergenic 30.0%
!!! TGTAAGCATCTTTTAGTTTG+TGG - chr3_4:63888402-63888421 Msa0513620:intron 30.0%
!!! GGATGTCATTCTTTTTAAGT+TGG - chr3_4:63888423-63888442 Msa0513620:intron 30.0%
TTTATGCATTTGAAAGCCAA+AGG + chr3_4:63888517-63888536 None:intergenic 30.0%
GTAAAGAATGGGATATATTC+GGG + chr3_4:63888581-63888600 None:intergenic 30.0%
ATCCCATTCTTTACAAAGAA+AGG - chr3_4:63888587-63888606 Msa0513620:intron 30.0%
AATCTGTTGTAATATCAGAG+AGG - chr3_4:63888731-63888750 Msa0513620:intron 30.0%
GACTTCTTATATTCATAAGC+TGG - chr3_4:63888791-63888810 Msa0513620:intron 30.0%
ATACATTCTAGCAGGTATAT+TGG + chr3_4:63888987-63889006 None:intergenic 30.0%
AGAATCTAATACATTCTAGC+AGG + chr3_4:63888995-63889014 None:intergenic 30.0%
TTCTGCAGAAAATTATGGTT+TGG - chr3_4:63889011-63889030 Msa0513620:intron 30.0%
ACAAAGATATGTAAGAACGA+TGG - chr3_4:63889294-63889313 Msa0513620:CDS 30.0%
AATTTGACCAAAGTCAAAAG+GGG - chr3_4:63889448-63889467 Msa0513620:CDS 30.0%
GGATAGCAGAAACTATAAAT+AGG + chr3_4:63889629-63889648 None:intergenic 30.0%
TTAACTAGTTGATTACCTAC+AGG + chr3_4:63889686-63889705 None:intergenic 30.0%
!!! AGAGAAGGTATTTTTGGTTT+TGG - chr3_4:63889777-63889796 Msa0513620:intron 30.0%
!!! AGGTATTTTTGGTTTTGGAA+AGG - chr3_4:63889782-63889801 Msa0513620:intron 30.0%
!!! TTTGGTTTTGGAAAGGAAAT+TGG - chr3_4:63889789-63889808 Msa0513620:intron 30.0%
AAAAGTTAAGATCGTTAAGC+TGG + chr3_4:63890066-63890085 None:intergenic 30.0%
CTGTGACTAATTGTACATAT+GGG - chr3_4:63890187-63890206 Msa0513620:intron 30.0%
!! AAAAACCTGATCATTTTTCG+GGG + chr3_4:63890216-63890235 None:intergenic 30.0%
GGTTCGCATATTTATGATTA+CGG - chr3_4:63890369-63890388 Msa0513620:CDS 30.0%
!! TAGTTCTTTTGCTGCTTATA+AGG - chr3_4:63890479-63890498 Msa0513620:intron 30.0%
ATTGTTACTATGCCTTCTTT+AGG + chr3_4:63890719-63890738 None:intergenic 30.0%
!! AAGATAAGGTACTGGAAAAA+AGG + chr3_4:63890907-63890926 None:intergenic 30.0%
TCCTTTGCATTAGAAGATAA+TGG + chr3_4:63891148-63891167 None:intergenic 30.0%
!! CTATCTACTTGGCTTTATTA+TGG - chr3_4:63891230-63891249 Msa0513620:CDS 30.0%
GATTTCCGATTATTGGAAAA+TGG + chr3_4:63891298-63891317 None:intergenic 30.0%
!! TGGTATTGATTTCCGATTAT+TGG + chr3_4:63891305-63891324 None:intergenic 30.0%
GAATTTCTTACTTGGAAAGT+GGG + chr3_4:63891348-63891367 None:intergenic 30.0%
TGAATCATGATCAAACAATG+GGG + chr3_4:63891627-63891646 None:intergenic 30.0%
TACGGTAATTACATTGTTCT+AGG - chr3_4:63891679-63891698 Msa0513620:CDS 30.0%
! GCAAGCAACAAAAAGTATAA+CGG + chr3_4:63891730-63891749 None:intergenic 30.0%
!!! CTTGTGTTTTTGTTTTATGC+AGG - chr3_4:63891858-63891877 Msa0513620:CDS 30.0%
!!! TGTTTTTGTTTTATGCAGGT+TGG - chr3_4:63891862-63891881 Msa0513620:CDS 30.0%
!! ACTCAAGTTTTGATACAGTA+TGG + chr3_4:63892066-63892085 None:intergenic 30.0%
AATAGAGAAACTCAAGGAAA+AGG - chr3_4:63892135-63892154 Msa0513620:CDS 30.0%
TCACGTAGTTAAAAGTTAAC+AGG - chr3_4:63892282-63892301 Msa0513620:five_prime_UTR 30.0%
!!! GGATTCGATTTTTTGGGTTT+GGG + chr3_4:63884877-63884896 None:intergenic 35.0%
GAATCGAAGAAATGTCAACA+TGG - chr3_4:63884960-63884979 Msa0513620:three_prime_UTR 35.0%
TGATACCTTGAGGTTGAAAA+AGG + chr3_4:63885138-63885157 None:intergenic 35.0%
GTTAGAGCAAAGACGTTATT+AGG - chr3_4:63885352-63885371 Msa0513620:intron 35.0%
CTATCTATTACCTGTAAACG+AGG + chr3_4:63885457-63885476 None:intergenic 35.0%
TCGTTTCAAAGTCCTTTAGT+TGG - chr3_4:63885499-63885518 Msa0513620:intron 35.0%
TTCAAAGTCCTTTAGTTGGT+AGG - chr3_4:63885731-63885750 Msa0513620:intron 35.0%
ATGTTCAACCTACCAACTAA+AGG + chr3_4:63885742-63885761 None:intergenic 35.0%
!! TTTAGTTGGTAGGTTGAACA+TGG - chr3_4:63885741-63885760 Msa0513620:intron 35.0%
!! TTAGTTGGTAGGTTGAACAT+GGG - chr3_4:63885742-63885761 Msa0513620:intron 35.0%
GAGAATAAAGTTGTGCATAG+TGG - chr3_4:63885769-63885788 Msa0513620:intron 35.0%
!! CAATTTTTCAGCATTCTGAG+GGG + chr3_4:63885857-63885876 None:intergenic 35.0%
!! GCAATTTTTCAGCATTCTGA+GGG + chr3_4:63885858-63885877 None:intergenic 35.0%
!! TGCAATTTTTCAGCATTCTG+AGG + chr3_4:63885859-63885878 None:intergenic 35.0%
!! TAAAGGACTTTGAAATGACG+CGG + chr3_4:63885941-63885960 None:intergenic 35.0%
TTCTTCAACGTACCAACTAA+AGG + chr3_4:63885958-63885977 None:intergenic 35.0%
! TTAGTTGGTACGTTGAAGAA+TGG - chr3_4:63885958-63885977 Msa0513620:intron 35.0%
! CTGGCAGTTTGGAATTTAAT+TGG + chr3_4:63886036-63886055 None:intergenic 35.0%
ATTAAATTCCAAACTGCCAG+TGG - chr3_4:63886036-63886055 Msa0513620:intron 35.0%
TTAAATTCCAAACTGCCAGT+GGG - chr3_4:63886037-63886056 Msa0513620:intron 35.0%
TCAAAGAAATCTCCCAAATC+AGG + chr3_4:63886120-63886139 None:intergenic 35.0%
GATTTGGGAGATTTCTTTGA+TGG - chr3_4:63886120-63886139 Msa0513620:CDS 35.0%
! TGTCATTTGATGTACCAAAG+GGG + chr3_4:63886235-63886254 None:intergenic 35.0%
!! GTGTCATTTGATGTACCAAA+GGG + chr3_4:63886236-63886255 None:intergenic 35.0%
!! AGTGTCATTTGATGTACCAA+AGG + chr3_4:63886237-63886256 None:intergenic 35.0%
GTTGTGAATGAAAGTGATTG+TGG - chr3_4:63886384-63886403 Msa0513620:intron 35.0%
CAGGCTGCTTATTATTTGTA+TGG + chr3_4:63886578-63886597 None:intergenic 35.0%
! GGAAATTCGAGGCTTTTTAA+AGG + chr3_4:63886643-63886662 None:intergenic 35.0%
GTAGAGATATTGGAAATTCG+AGG + chr3_4:63886654-63886673 None:intergenic 35.0%
ATTTCCAATATCTCTACCTC+TGG - chr3_4:63886657-63886676 Msa0513620:intron 35.0%
TGGATAGTGAAATGGATATC+GGG + chr3_4:63886855-63886874 None:intergenic 35.0%
GATATCCATTTCACTATCCA+AGG - chr3_4:63886855-63886874 Msa0513620:CDS 35.0%
AAATTACAGTCAGTACTGCT+CGG + chr3_4:63886991-63887010 None:intergenic 35.0%
! AGATGCAACTTACTCTTTTG+AGG + chr3_4:63887179-63887198 None:intergenic 35.0%
AAACTACGCCAATTAAGACT+AGG + chr3_4:63887456-63887475 None:intergenic 35.0%
GGGTCTTGAATCATTACAAA+TGG - chr3_4:63887503-63887522 Msa0513620:intron 35.0%
!! CAAATGGATTGTATGGAAAC+TGG - chr3_4:63887519-63887538 Msa0513620:intron 35.0%
!! GAATTTTCTTGATGGTAGAC+CGG + chr3_4:63887758-63887777 None:intergenic 35.0%
CCATCAAGAAAATTCTTGAG+GGG - chr3_4:63887763-63887782 Msa0513620:intron 35.0%
CATCAAGAAAATTCTTGAGG+GGG - chr3_4:63887764-63887783 Msa0513620:intron 35.0%
GGTTAGAATTTCAACTTGCA+CGG - chr3_4:63887925-63887944 Msa0513620:intron 35.0%
TCAAAATATAAGAGGTTCCC+TGG - chr3_4:63887965-63887984 Msa0513620:intron 35.0%
AAGCCACAAAAAAACCTCAA+GGG + chr3_4:63888233-63888252 None:intergenic 35.0%
TAAGCCACAAAAAAACCTCA+AGG + chr3_4:63888234-63888253 None:intergenic 35.0%
!!! TTGAGGTTTTTTTGTGGCTT+AGG - chr3_4:63888233-63888252 Msa0513620:intron 35.0%
ATTTGAGAAAACCATCCAAC+AGG + chr3_4:63888291-63888310 None:intergenic 35.0%
ATGGAACATATAGAGCTCAT+TGG - chr3_4:63888361-63888380 Msa0513620:intron 35.0%
TGGAACATATAGAGCTCATT+GGG - chr3_4:63888362-63888381 Msa0513620:intron 35.0%
AGCTCAAGAAAATAAGCTCA+GGG + chr3_4:63888468-63888487 None:intergenic 35.0%
TAGCTCAAGAAAATAAGCTC+AGG + chr3_4:63888469-63888488 None:intergenic 35.0%
! ATTTTCTTGAGCTAATCGAC+AGG - chr3_4:63888475-63888494 Msa0513620:CDS 35.0%
CCACTGCTTAACCTAATATA+AGG + chr3_4:63888709-63888728 None:intergenic 35.0%
CCTTATATTAGGTTAAGCAG+TGG - chr3_4:63888706-63888725 Msa0513620:intron 35.0%
TGTTGTAATATCAGAGAGGA+TGG - chr3_4:63888735-63888754 Msa0513620:intron 35.0%
TCAGACAAAAAGGTGATTGA+TGG + chr3_4:63888839-63888858 None:intergenic 35.0%
GCATAAGCAATCAATACTGA+GGG + chr3_4:63888873-63888892 None:intergenic 35.0%
!! GCAGAAAATTATGGTTTGGT+AGG - chr3_4:63889015-63889034 Msa0513620:intron 35.0%
TTTCCTTGCTTCTAGATACT+AGG + chr3_4:63889041-63889060 None:intergenic 35.0%
!! TTTATAAGGTATTGGGTCGT+TGG - chr3_4:63889244-63889263 Msa0513620:intron 35.0%
ATGTAAGAACGATGGATGAT+TGG - chr3_4:63889302-63889321 Msa0513620:CDS 35.0%
! TATTCATTGGGAAAAGCATG+AGG - chr3_4:63889352-63889371 Msa0513620:CDS 35.0%
!! TTTTGTTTCGTCCTTTCTTC+TGG + chr3_4:63889509-63889528 None:intergenic 35.0%
AGAAGAAAGGACGAAACAAA+AGG - chr3_4:63889508-63889527 Msa0513620:intron 35.0%
TGTGTTTCTTTGCTAGAGAT+GGG + chr3_4:63889580-63889599 None:intergenic 35.0%
ATGTGTTTCTTTGCTAGAGA+TGG + chr3_4:63889581-63889600 None:intergenic 35.0%
TTTATGATAGGTAGTCCTGT+AGG - chr3_4:63889668-63889687 Msa0513620:CDS 35.0%
!!! GAGATCAGAGAAGGTATTTT+TGG - chr3_4:63889771-63889790 Msa0513620:intron 35.0%
! AAGTCTTGTGTTCAACAACT+TGG + chr3_4:63889927-63889946 None:intergenic 35.0%
AGCCATATCCAAATTTACAG+TGG + chr3_4:63890111-63890130 None:intergenic 35.0%
CCATATGTACAATTAGTCAC+AGG + chr3_4:63890189-63890208 None:intergenic 35.0%
CCTGTGACTAATTGTACATA+TGG - chr3_4:63890186-63890205 Msa0513620:intron 35.0%
! TATTGTTTCGGAGTATCAGA+AGG - chr3_4:63890338-63890357 Msa0513620:CDS 35.0%
GAGTATCAGAAGGAAATAAC+TGG - chr3_4:63890348-63890367 Msa0513620:CDS 35.0%
GGCTAAGATATATAAGATGC+TGG - chr3_4:63890404-63890423 Msa0513620:intron 35.0%
ATATCTGCCATTAGGAATTC+GGG + chr3_4:63890444-63890463 None:intergenic 35.0%
CATATCTGCCATTAGGAATT+CGG + chr3_4:63890445-63890464 None:intergenic 35.0%
!! GAGAAAGCTTTGAAAGATTC+TGG - chr3_4:63890617-63890636 Msa0513620:CDS 35.0%
! AAGAAGGCATAGTAACAATC+TGG - chr3_4:63890720-63890739 Msa0513620:CDS 35.0%
CAAGTGTATAGTAACTAGCT+AGG + chr3_4:63890880-63890899 None:intergenic 35.0%
!! TGTTATGATTTGATAGCGTC+AGG - chr3_4:63891018-63891037 Msa0513620:CDS 35.0%
GCCATTATCTTCTAATGCAA+AGG - chr3_4:63891144-63891163 Msa0513620:CDS 35.0%
TGCAAAGGAACAGTTTAAGT+AGG - chr3_4:63891159-63891178 Msa0513620:CDS 35.0%
AGGTATCTAGCAATCAGAAT+AGG - chr3_4:63891179-63891198 Msa0513620:CDS 35.0%
ACAAAGGAGAACAATAAGGT+GGG + chr3_4:63891272-63891291 None:intergenic 35.0%
TACAAAGGAGAACAATAAGG+TGG + chr3_4:63891273-63891292 None:intergenic 35.0%
ACCTTATTGTTCTCCTTTGT+AGG - chr3_4:63891272-63891291 Msa0513620:CDS 35.0%
TATTGGAAAATGGCCTACAA+AGG + chr3_4:63891288-63891307 None:intergenic 35.0%
!! GTAGGCCATTTTCCAATAAT+CGG - chr3_4:63891290-63891309 Msa0513620:CDS 35.0%
GGAATTTCTTACTTGGAAAG+TGG + chr3_4:63891349-63891368 None:intergenic 35.0%
CAAAGATACACACACACATA+AGG + chr3_4:63891383-63891402 None:intergenic 35.0%
!! CAATGGATTTTTGTGACTGA+TGG - chr3_4:63891536-63891555 Msa0513620:CDS 35.0%
CAATGTAATTACCGTAGATC+CGG + chr3_4:63891675-63891694 None:intergenic 35.0%
AGGACCATACAAACCATATA+TGG - chr3_4:63891911-63891930 Msa0513620:CDS 35.0%
GGACCATACAAACCATATAT+GGG - chr3_4:63891912-63891931 Msa0513620:CDS 35.0%
! CAACCCATATATGGTTTGTA+TGG + chr3_4:63891918-63891937 None:intergenic 35.0%
! GTATCAAAACTTGAGTTGCA+TGG - chr3_4:63892070-63892089 Msa0513620:CDS 35.0%
GCAGATAATAGAGAAACTCA+AGG - chr3_4:63892129-63892148 Msa0513620:CDS 35.0%
!! AAACTCAAGGAAAAGGTGTT+GGG - chr3_4:63892142-63892161 Msa0513620:CDS 35.0%
TAACTACGTGAATGTTGTCA+TGG + chr3_4:63892273-63892292 None:intergenic 35.0%
!!! TTTTTTGGGTTTGGGAATGG+CGG + chr3_4:63884869-63884888 None:intergenic 40.0%
!!! CGATTTTTTGGGTTTGGGAA+TGG + chr3_4:63884872-63884891 None:intergenic 40.0%
!!! GGGATTCGATTTTTTGGGTT+TGG + chr3_4:63884878-63884897 None:intergenic 40.0%
TTGCCACCGGTAATTGTTAT+CGG + chr3_4:63885002-63885021 None:intergenic 40.0%
AAGATCGTACATGGAAGGAA+GGG + chr3_4:63885092-63885111 None:intergenic 40.0%
ATGAAGGAGAAGATCGTACA+TGG + chr3_4:63885101-63885120 None:intergenic 40.0%
! TTGAGGTTGAAAAAGGTGTG+AGG + chr3_4:63885131-63885150 None:intergenic 40.0%
!!! TCACACCTTTTTCAACCTCA+AGG - chr3_4:63885130-63885149 Msa0513620:intron 40.0%
GGATTGCATGAAGAAACTGT+TGG - chr3_4:63885373-63885392 Msa0513620:intron 40.0%
GCTCCGATAAAATTCCAAAC+TGG - chr3_4:63885598-63885617 Msa0513620:CDS 40.0%
ATTGCCTCATTTGCAGCTTA+TGG - chr3_4:63885678-63885697 Msa0513620:CDS 40.0%
CTATCCATAAGCTGCAAATG+AGG + chr3_4:63885685-63885704 None:intergenic 40.0%
ATTGCCTCATTTGCAGCTTA+TGG - chr3_4:63885678-63885697 Msa0513620:CDS 40.0%
CTATCCATAAGCTGCAAATG+AGG + chr3_4:63885685-63885704 None:intergenic 40.0%
GAGAGTAAATTTGTGCAACC+AGG - chr3_4:63885985-63886004 Msa0513620:intron 40.0%
AAATTTGTGCAACCAGGTAG+TGG - chr3_4:63885991-63886010 Msa0513620:intron 40.0%
! CTTCTTGGTGATCCTGATTT+GGG - chr3_4:63886105-63886124 Msa0513620:CDS 40.0%
TTGGGAGATTTCTTTGATGG+TGG - chr3_4:63886123-63886142 Msa0513620:CDS 40.0%
!! AGATTCGCTTTTCTCGTTTC+TGG - chr3_4:63886146-63886165 Msa0513620:CDS 40.0%
!! CTTTTCTCGTTTCTGGATCA+GGG - chr3_4:63886153-63886172 Msa0513620:CDS 40.0%
ACTCTCACTTCTTTCAACAG+AGG + chr3_4:63886199-63886218 None:intergenic 40.0%
TTTGTTTCGAAGGCTGCAAA+GGG + chr3_4:63886299-63886318 None:intergenic 40.0%
ATTTGTTTCGAAGGCTGCAA+AGG + chr3_4:63886300-63886319 None:intergenic 40.0%
TTTGCAGCCTTCGAAACAAA+TGG - chr3_4:63886299-63886318 Msa0513620:intron 40.0%
TCAAATAAGCTTCGCAACGA+AGG - chr3_4:63886327-63886346 Msa0513620:intron 40.0%
!!! CAGGAGCTTTGCTACTTTTA+TGG + chr3_4:63886410-63886429 None:intergenic 40.0%
CATAAAAGTAGCAAAGCTCC+TGG - chr3_4:63886408-63886427 Msa0513620:intron 40.0%
! TCTTCAAGAATGGATTCACG+TGG - chr3_4:63886501-63886520 Msa0513620:CDS 40.0%
GATTCACGTGGAAAACCATT+GGG - chr3_4:63886513-63886532 Msa0513620:CDS 40.0%
! ATGGACTGTCTTAACGGTAT+TGG + chr3_4:63886559-63886578 None:intergenic 40.0%
AATAATAAGCAGCCTGCTAG+TGG - chr3_4:63886582-63886601 Msa0513620:CDS 40.0%
ATAATAAGCAGCCTGCTAGT+GGG - chr3_4:63886583-63886602 Msa0513620:CDS 40.0%
! GATTTGGCTCAATTATCCTC+TGG - chr3_4:63886800-63886819 Msa0513620:CDS 40.0%
TGCTTCTGGACTCAAAAGAA+AGG - chr3_4:63886823-63886842 Msa0513620:CDS 40.0%
TGCATCCTTGGATAGTGAAA+TGG + chr3_4:63886863-63886882 None:intergenic 40.0%
AATTCCTTGATGTGCATCCT+TGG + chr3_4:63886875-63886894 None:intergenic 40.0%
TCCTCCATTAGAGCAAAAAG+TGG - chr3_4:63886904-63886923 Msa0513620:intron 40.0%
!!! ACCACTTTTTGCTCTAATGG+AGG + chr3_4:63886908-63886927 None:intergenic 40.0%
!!! CTGACCACTTTTTGCTCTAA+TGG + chr3_4:63886911-63886930 None:intergenic 40.0%
TGTTCTTTACTGTCTTGTCC+TGG - chr3_4:63886951-63886970 Msa0513620:intron 40.0%
GTTCTTTACTGTCTTGTCCT+GGG - chr3_4:63886952-63886971 Msa0513620:intron 40.0%
CATTACTATCAGAGCCATCA+TGG + chr3_4:63887096-63887115 None:intergenic 40.0%
!! CATGATGGCTCTGATAGTAA+TGG - chr3_4:63887094-63887113 Msa0513620:intron 40.0%
!! TGGCTCTGATAGTAATGGTA+TGG - chr3_4:63887099-63887118 Msa0513620:intron 40.0%
! GGCTCTGATAGTAATGGTAT+GGG - chr3_4:63887100-63887119 Msa0513620:intron 40.0%
ATCCATCTATTGACACAGCA+CGG - chr3_4:63887136-63887155 Msa0513620:intron 40.0%
TTCGTAGTTACTGGAGATAC+TGG + chr3_4:63887219-63887238 None:intergenic 40.0%
AGTATCTCCAGTAACTACGA+AGG - chr3_4:63887218-63887237 Msa0513620:intron 40.0%
AGCTATTCCTTCGTAGTTAC+TGG + chr3_4:63887228-63887247 None:intergenic 40.0%
CTTCAATTGCACATCTCTCT+AGG - chr3_4:63887479-63887498 Msa0513620:intron 40.0%
AATTGCACATCTCTCTAGGT+GGG - chr3_4:63887483-63887502 Msa0513620:intron 40.0%
! CCCCTCAAGAATTTTCTTGA+TGG + chr3_4:63887766-63887785 None:intergenic 40.0%
AAGAAAATTCTTGAGGGGGA+TGG - chr3_4:63887768-63887787 Msa0513620:intron 40.0%
CAGAGAGTCATCATTGAAGA+AGG + chr3_4:63887798-63887817 None:intergenic 40.0%
TGTTCCATTGTCAAAGCAAC+TGG - chr3_4:63888039-63888058 Msa0513620:intron 40.0%
TGTTTGTAGGACAGAAGCTT+CGG - chr3_4:63888074-63888093 Msa0513620:intron 40.0%
TCTGCACAAGGAATATGAGA+AGG + chr3_4:63888168-63888187 None:intergenic 40.0%
TCATATTCCTTGTGCAGATC+TGG - chr3_4:63888170-63888189 Msa0513620:intron 40.0%
CATATTCCTTGTGCAGATCT+GGG - chr3_4:63888171-63888190 Msa0513620:intron 40.0%
ATATTCCTTGTGCAGATCTG+GGG - chr3_4:63888172-63888191 Msa0513620:intron 40.0%
AGCCACAAAAAAACCTCAAG+GGG + chr3_4:63888232-63888251 None:intergenic 40.0%
TAATCGACAGGTAAAGTTGC+TGG - chr3_4:63888487-63888506 Msa0513620:intron 40.0%
ATGCATTTGAAAGCCAAAGG+TGG + chr3_4:63888514-63888533 None:intergenic 40.0%
CGGTTTAGTACCTCAAACTT+TGG - chr3_4:63888546-63888565 Msa0513620:intron 40.0%
TTAGTACCTCAAACTTTGGC+AGG - chr3_4:63888550-63888569 Msa0513620:intron 40.0%
GTAATTCCTGCCAAAGTTTG+AGG + chr3_4:63888559-63888578 None:intergenic 40.0%
GAGGATGGAGAGTAAAATGA+TGG - chr3_4:63888750-63888769 Msa0513620:intron 40.0%
CGCATAAGCAATCAATACTG+AGG + chr3_4:63888874-63888893 None:intergenic 40.0%
CAACTCTTCGAAAAAGCAAC+CGG - chr3_4:63889120-63889139 Msa0513620:CDS 40.0%
ATAGAAATAAGGCCCTACAC+CGG + chr3_4:63889142-63889161 None:intergenic 40.0%
GTTTCTGCTATCCTTACAGA+TGG - chr3_4:63889636-63889655 Msa0513620:CDS 40.0%
TTTAGTTAGGGCATGTGAGA+TGG - chr3_4:63889725-63889744 Msa0513620:intron 40.0%
! CCTTCTCTGATCTCTCTTTT+CGG + chr3_4:63889765-63889784 None:intergenic 40.0%
AAAACTTCGAGCAACCTGAT+AGG + chr3_4:63889883-63889902 None:intergenic 40.0%
TTCTGTCGCCACTGTAAATT+TGG - chr3_4:63890100-63890119 Msa0513620:CDS 40.0%
CGCCACTGTAAATTTGGATA+TGG - chr3_4:63890106-63890125 Msa0513620:CDS 40.0%
!! TATGGCTTGCTGCATAATGA+AGG - chr3_4:63890124-63890143 Msa0513620:CDS 40.0%
TATGATTACGGCAATAGCGA+AGG - chr3_4:63890381-63890400 Msa0513620:CDS 40.0%
ATGATTACGGCAATAGCGAA+GGG - chr3_4:63890382-63890401 Msa0513620:CDS 40.0%
GCAAAAGAACTAAGTTGCTC+CGG + chr3_4:63890471-63890490 None:intergenic 40.0%
ATGGTTTCACATCCATCTTC+AGG - chr3_4:63890562-63890581 Msa0513620:CDS 40.0%
ACTGTCTATTTGCCTGAAGA+TGG + chr3_4:63890577-63890596 None:intergenic 40.0%
GGCAAATAGACAGTCACAAA+TGG - chr3_4:63890583-63890602 Msa0513620:CDS 40.0%
GAGAAGTAACGCCATTTATG+AGG - chr3_4:63890651-63890670 Msa0513620:CDS 40.0%
ACTACACGCAACCTCATAAA+TGG + chr3_4:63890665-63890684 None:intergenic 40.0%
TTTATGAGGTTGCGTGTAGT+TGG - chr3_4:63890665-63890684 Msa0513620:CDS 40.0%
CAACGAGATAAGCCTAAAGA+AGG - chr3_4:63890704-63890723 Msa0513620:CDS 40.0%
ATTGCAGGACTCATACCATT+TGG - chr3_4:63891067-63891086 Msa0513620:CDS 40.0%
!! CATACCATTTGGCTCTGATT+CGG - chr3_4:63891078-63891097 Msa0513620:CDS 40.0%
! AGAAGATAATGGCAACCACT+TGG + chr3_4:63891137-63891156 None:intergenic 40.0%
GCCTACAAAGGAGAACAATA+AGG + chr3_4:63891276-63891295 None:intergenic 40.0%
CGGAAATCAATACCATTGTC+AGG - chr3_4:63891310-63891329 Msa0513620:CDS 40.0%
ACACACACACATAAGGACTA+GGG + chr3_4:63891376-63891395 None:intergenic 40.0%
TACACACACACATAAGGACT+AGG + chr3_4:63891377-63891396 None:intergenic 40.0%
!! TGTTGCATTTGTTGTGCATG+TGG - chr3_4:63891481-63891500 Msa0513620:CDS 40.0%
!! GTTGCATTTGTTGTGCATGT+GGG - chr3_4:63891482-63891501 Msa0513620:CDS 40.0%
!! ATTTGTTGTGCATGTGGGAA+AGG - chr3_4:63891487-63891506 Msa0513620:CDS 40.0%
CAAGTCAGCAAAAGAAGCAA+TGG - chr3_4:63891519-63891538 Msa0513620:CDS 40.0%
! ACTGATGGATCCATCATGAA+TGG - chr3_4:63891551-63891570 Msa0513620:CDS 40.0%
! CTGATGGATCCATCATGAAT+GGG - chr3_4:63891552-63891571 Msa0513620:CDS 40.0%
TGACTGTAACCCATTCATGA+TGG + chr3_4:63891564-63891583 None:intergenic 40.0%
!! ATCATGAATGGGTTACAGTC+AGG - chr3_4:63891563-63891582 Msa0513620:CDS 40.0%
CAATAGGGAGCAAAAGCAAA+TGG + chr3_4:63891752-63891771 None:intergenic 40.0%
TAGCATCAGCAACCCATATA+TGG + chr3_4:63891927-63891946 None:intergenic 40.0%
! GAAACTCAAGGAAAAGGTGT+TGG - chr3_4:63892141-63892160 Msa0513620:CDS 40.0%
!! GAAAAGGTGTTGGGTATAGT+TGG - chr3_4:63892151-63892170 Msa0513620:CDS 40.0%
TGGTGATTGTAAAGCCTAGA+TGG - chr3_4:63892171-63892190 Msa0513620:CDS 40.0%
AAAGCCTAGATGGAGAAAAG+AGG - chr3_4:63892181-63892200 Msa0513620:CDS 40.0%
!!! TTTTTGGGTTTGGGAATGGC+GGG + chr3_4:63884868-63884887 None:intergenic 45.0%
AGATCGTACATGGAAGGAAG+GGG + chr3_4:63885091-63885110 None:intergenic 45.0%
GAAGATCGTACATGGAAGGA+AGG + chr3_4:63885093-63885112 None:intergenic 45.0%
AGGAGAAGATCGTACATGGA+AGG + chr3_4:63885097-63885116 None:intergenic 45.0%
! AGGTTGAAAAAGGTGTGAGG+CGG + chr3_4:63885128-63885147 None:intergenic 45.0%
!! TCGCTTTTCAAGACAGCTTC+TGG - chr3_4:63885298-63885317 Msa0513620:CDS 45.0%
TCAAGACGAACCTCGTTTAC+AGG - chr3_4:63885444-63885463 Msa0513620:intron 45.0%
CCACTACGACTACCAATATC+TGG + chr3_4:63885562-63885581 None:intergenic 45.0%
! CCAGATATTGGTAGTCGTAG+TGG - chr3_4:63885559-63885578 Msa0513620:CDS 45.0%
! GTGCATAGTGGTAGTGTTAG+TGG - chr3_4:63885781-63885800 Msa0513620:intron 45.0%
! TGGTAGTGTTAGTGGTGCTA+AGG - chr3_4:63885789-63885808 Msa0513620:intron 45.0%
AATAGATAACGACCTCCCAC+TGG + chr3_4:63886055-63886074 None:intergenic 45.0%
GGGAGGTCGTTATCTATTTC+TGG - chr3_4:63886057-63886076 Msa0513620:CDS 45.0%
! GCTTCTTGGTGATCCTGATT+TGG - chr3_4:63886104-63886123 Msa0513620:CDS 45.0%
!! GCTTTTCTCGTTTCTGGATC+AGG - chr3_4:63886152-63886171 Msa0513620:CDS 45.0%
AACAGAGGAAGTGATTGTGC+TGG + chr3_4:63886184-63886203 None:intergenic 45.0%
AAGCTTCGCAACGAAGGTAA+TGG - chr3_4:63886333-63886352 Msa0513620:intron 45.0%
AGCTTCGCAACGAAGGTAAT+GGG - chr3_4:63886334-63886353 Msa0513620:intron 45.0%
TTATACAAGGGTTTCGGTCC+AGG + chr3_4:63886429-63886448 None:intergenic 45.0%
GGATTCACGTGGAAAACCAT+TGG - chr3_4:63886512-63886531 Msa0513620:CDS 45.0%
! ATTCTCCTTTTCCCACTAGC+AGG + chr3_4:63886597-63886616 None:intergenic 45.0%
GCTAGTGGGAAAAGGAGAAT+AGG - chr3_4:63886597-63886616 Msa0513620:CDS 45.0%
GTCACCAGAGGTAGAGATAT+TGG + chr3_4:63886664-63886683 None:intergenic 45.0%
TTGAACATCTTGGTCACCAG+AGG + chr3_4:63886676-63886695 None:intergenic 45.0%
CAATTATCCTCTGGTGCTTC+TGG - chr3_4:63886809-63886828 Msa0513620:CDS 45.0%
CTATCCAAGGATGCACATCA+AGG - chr3_4:63886868-63886887 Msa0513620:CDS 45.0%
ATTACCTGATGTCACCTGTC+TGG + chr3_4:63887056-63887075 None:intergenic 45.0%
GGAGCGTACATATTCCATGA+TGG - chr3_4:63887079-63887098 Msa0513620:intron 45.0%
!!! CTCTTTTGAGGCAAAACGCA+GGG + chr3_4:63887167-63887186 None:intergenic 45.0%
!!! ACTCTTTTGAGGCAAAACGC+AGG + chr3_4:63887168-63887187 None:intergenic 45.0%
! GATACTGGAAGCACAAGTTC+AGG + chr3_4:63887204-63887223 None:intergenic 45.0%
GATGCAAGGACATGTCAGTT+AGG - chr3_4:63887274-63887293 Msa0513620:intron 45.0%
GAATGATAAGAGGTCCTCTG+TGG - chr3_4:63887350-63887369 Msa0513620:intron 45.0%
ATTTGGCGGAGTTTGGTACT+TGG - chr3_4:63887385-63887404 Msa0513620:intron 45.0%
CAATTGCACATCTCTCTAGG+TGG - chr3_4:63887482-63887501 Msa0513620:intron 45.0%
ATGAGAGATGCTATCCAGCT+AGG - chr3_4:63887548-63887567 Msa0513620:intron 45.0%
! AATTTTCCAGCACACCTAGC+TGG + chr3_4:63887565-63887584 None:intergenic 45.0%
GACTGTATCAAACGTGCTTG+AGG - chr3_4:63887588-63887607 Msa0513620:intron 45.0%
TGCTTGAGGAACTGAAGTAC+AGG - chr3_4:63887602-63887621 Msa0513620:intron 45.0%
!! TTTTCTTGATGGTAGACCGG+TGG + chr3_4:63887755-63887774 None:intergenic 45.0%
TCTGATCATGTGCTTGACAG+TGG - chr3_4:63887834-63887853 Msa0513620:intron 45.0%
CTGATCATGTGCTTGACAGT+GGG - chr3_4:63887835-63887854 Msa0513620:intron 45.0%
TGATCATGTGCTTGACAGTG+GGG - chr3_4:63887836-63887855 Msa0513620:intron 45.0%
GCATTATCTGAGCCACAAAC+CGG - chr3_4:63887858-63887877 Msa0513620:intron 45.0%
CATTATCTGAGCCACAAACC+GGG - chr3_4:63887859-63887878 Msa0513620:intron 45.0%
GCTGCTGGAAGATTGTTTGT+AGG - chr3_4:63888061-63888080 Msa0513620:intron 45.0%
GTTTGTAGGACAGAAGCTTC+GGG - chr3_4:63888075-63888094 Msa0513620:intron 45.0%
AAAACCTCAAGGGGTGAAAC+TGG + chr3_4:63888223-63888242 None:intergenic 45.0%
!!! CACCCCTTGAGGTTTTTTTG+TGG - chr3_4:63888227-63888246 Msa0513620:intron 45.0%
GTGTGGATGTGTATTCCTGT+TGG - chr3_4:63888273-63888292 Msa0513620:intron 45.0%
GGATGTGTATTCCTGTTGGA+TGG - chr3_4:63888277-63888296 Msa0513620:intron 45.0%
ATAGAGCTCATTGGGCAGAT+CGG - chr3_4:63888370-63888389 Msa0513620:intron 45.0%
TAAAGTTGCTGGTCCACCTT+TGG - chr3_4:63888498-63888517 Msa0513620:intron 45.0%
TGATGGAGCTGCACAATCAA+AGG - chr3_4:63888767-63888786 Msa0513620:intron 45.0%
AGGCCTAGTATCTAGAAGCA+AGG - chr3_4:63889035-63889054 Msa0513620:intron 45.0%
TTCGAAAAAGCAACCGGTGT+AGG - chr3_4:63889126-63889145 Msa0513620:CDS 45.0%
TCGAAAAAGCAACCGGTGTA+GGG - chr3_4:63889127-63889146 Msa0513620:CDS 45.0%
GATTGGTATGACAACTGCCA+AGG - chr3_4:63889319-63889338 Msa0513620:CDS 45.0%
TTGCTAGAGATGGGAGGAAA+TGG + chr3_4:63889571-63889590 None:intergenic 45.0%
GTTTCTTTGCTAGAGATGGG+AGG + chr3_4:63889577-63889596 None:intergenic 45.0%
CCGAAAAGAGAGATCAGAGA+AGG - chr3_4:63889762-63889781 Msa0513620:intron 45.0%
GGAAACCCCGAAAAATGATC+AGG - chr3_4:63890208-63890227 Msa0513620:intron 45.0%
! AGGTTTTTACAGTGCGTGTG+TGG - chr3_4:63890228-63890247 Msa0513620:intron 45.0%
CTGTGACTGATCACCTTGTA+TGG - chr3_4:63890288-63890307 Msa0513620:intron 45.0%
TGATTACGGCAATAGCGAAG+GGG - chr3_4:63890383-63890402 Msa0513620:CDS 45.0%
TGCAGAACCCGAATTCCTAA+TGG - chr3_4:63890434-63890453 Msa0513620:intron 45.0%
CCTAATGGCAGATATGACTC+CGG - chr3_4:63890449-63890468 Msa0513620:intron 45.0%
!! AGCTTTGAAAGATTCTGGCC+TGG - chr3_4:63890622-63890641 Msa0513620:CDS 45.0%
!! GCTTTGAAAGATTCTGGCCT+GGG - chr3_4:63890623-63890642 Msa0513620:CDS 45.0%
! GGAGAAGCATATGCAATTGC+AGG - chr3_4:63891052-63891071 Msa0513620:CDS 45.0%
ACATCCGAATCAGAGCCAAA+TGG + chr3_4:63891085-63891104 None:intergenic 45.0%
ATCCTCTAGTCTGCAAGTGA+AGG + chr3_4:63891108-63891127 None:intergenic 45.0%
CTAGAGGATCTACTACCAAG+TGG - chr3_4:63891119-63891138 Msa0513620:CDS 45.0%
ATGTCACTCAGACCTGACAA+TGG + chr3_4:63891325-63891344 None:intergenic 45.0%
ACACACACATAAGGACTAGG+GGG + chr3_4:63891374-63891393 None:intergenic 45.0%
CACACACACATAAGGACTAG+GGG + chr3_4:63891375-63891394 None:intergenic 45.0%
GTGTGTGTGTATCTTTGTGC+TGG - chr3_4:63891386-63891405 Msa0513620:CDS 45.0%
CAATGGGGAGCAAAAGCAAA+TGG + chr3_4:63891612-63891631 None:intergenic 45.0%
GCAAGGTTATGGTTGATTGG+TGG + chr3_4:63891653-63891672 None:intergenic 45.0%
CCAATCAACCATAACCTTGC+CGG - chr3_4:63891653-63891672 Msa0513620:CDS 45.0%
TAATTACCGTAGATCCGGCA+AGG + chr3_4:63891670-63891689 None:intergenic 45.0%
!! TTCTGAGGTGAGAACACTGT+GGG + chr3_4:63891984-63892003 None:intergenic 45.0%
!! TTTCTGAGGTGAGAACACTG+TGG + chr3_4:63891985-63892004 None:intergenic 45.0%
ATTGCTAGCCCATCTTCTGA+CGG + chr3_4:63892019-63892038 None:intergenic 45.0%
TTCGAGCTTGGTATGCATCA+TGG - chr3_4:63892038-63892057 Msa0513620:intron 45.0%
! TCCTCCTCTTTTCTCCATCT+AGG + chr3_4:63892188-63892207 None:intergenic 45.0%
GGTAATTGTTATCGGCGTCG+GGG + chr3_4:63884994-63885013 None:intergenic 50.0%
CGGTAATTGTTATCGGCGTC+GGG + chr3_4:63884995-63885014 None:intergenic 50.0%
CCGGTAATTGTTATCGGCGT+CGG + chr3_4:63884996-63885015 None:intergenic 50.0%
CCGACGCCGATAACAATTAC+CGG - chr3_4:63884993-63885012 Msa0513620:three_prime_UTR 50.0%
ACGCCGATAACAATTACCGG+TGG - chr3_4:63884996-63885015 Msa0513620:three_prime_UTR 50.0%
ATAGAAGTAGGAGGGGGTGA+GGG + chr3_4:63885058-63885077 None:intergenic 50.0%
AATAGAAGTAGGAGGGGGTG+AGG + chr3_4:63885059-63885078 None:intergenic 50.0%
GTGGGAATAGAAGTAGGAGG+GGG + chr3_4:63885064-63885083 None:intergenic 50.0%
GGTGGGAATAGAAGTAGGAG+GGG + chr3_4:63885065-63885084 None:intergenic 50.0%
GGGTGGGAATAGAAGTAGGA+GGG + chr3_4:63885066-63885085 None:intergenic 50.0%
!! ACTTTGAAACGACGCAGCAC+TGG + chr3_4:63885491-63885510 None:intergenic 50.0%
! ATTGGTAGTCGTAGTGGTGC+TGG - chr3_4:63885565-63885584 Msa0513620:CDS 50.0%
! TTTGTGCAACCAGGTAGTGG+TGG - chr3_4:63885994-63886013 Msa0513620:intron 50.0%
AATTCCAAACTGCCAGTGGG+AGG - chr3_4:63886040-63886059 Msa0513620:CDS 50.0%
ACGTGGAAAACCATTGGGCA+GGG - chr3_4:63886518-63886537 Msa0513620:CDS 50.0%
AAAACCATTGGGCAGGGCAT+TGG - chr3_4:63886524-63886543 Msa0513620:CDS 50.0%
!! TTTGAGTCCAGAAGCACCAG+AGG + chr3_4:63886819-63886838 None:intergenic 50.0%
TCTTGTCCTGGGACCTCATT+TGG - chr3_4:63886963-63886982 Msa0513620:intron 50.0%
GTACTGCTCGGTACCAAATG+AGG + chr3_4:63886979-63886998 None:intergenic 50.0%
TTCTCCCAATACAGCCAGAC+AGG - chr3_4:63887039-63887058 Msa0513620:intron 50.0%
GTCACCTGTCTGGCTGTATT+GGG + chr3_4:63887046-63887065 None:intergenic 50.0%
TGTCACCTGTCTGGCTGTAT+TGG + chr3_4:63887047-63887066 None:intergenic 50.0%
CAGGTGACATCAGGTAATGC+AGG - chr3_4:63887058-63887077 Msa0513620:intron 50.0%
CTCCGTGCTGTGTCAATAGA+TGG + chr3_4:63887141-63887160 None:intergenic 50.0%
GCAAGGACATGTCAGTTAGG+TGG - chr3_4:63887277-63887296 Msa0513620:intron 50.0%
!! TTGGTACTTGGAGGGCACTT+TGG - chr3_4:63887397-63887416 Msa0513620:intron 50.0%
GAGAAGTGAATCATGGCCAC+CGG - chr3_4:63887736-63887755 Msa0513620:intron 50.0%
ACAAACCGGGAATCAGAGCA+GGG - chr3_4:63887872-63887891 Msa0513620:intron 50.0%
! GCAGCCAGTTGCTTTGACAA+TGG + chr3_4:63888046-63888065 None:intergenic 50.0%
TTGTCAAAGCAACTGGCTGC+TGG - chr3_4:63888046-63888065 Msa0513620:intron 50.0%
ATCTGGGGAGCAGGTTTATG+CGG - chr3_4:63888187-63888206 Msa0513620:intron 50.0%
CAGGTTTATGCGGCTGGAAT+GGG - chr3_4:63888197-63888216 Msa0513620:intron 50.0%
ACCAAAGTCAAAAGGGGAGC+AGG - chr3_4:63889454-63889473 Msa0513620:CDS 50.0%
!!! TCCTGCTCCCCTTTTGACTT+TGG + chr3_4:63889458-63889477 None:intergenic 50.0%
GATGGCTATATAGGGCAACC+TGG - chr3_4:63890032-63890051 Msa0513620:CDS 50.0%
TATATAGGGCAACCTGGCCT+TGG - chr3_4:63890038-63890057 Msa0513620:CDS 50.0%
! ATATAGGGCAACCTGGCCTT+GGG - chr3_4:63890039-63890058 Msa0513620:CDS 50.0%
AGATCGTTAAGCTGGTCCCA+AGG + chr3_4:63890058-63890077 None:intergenic 50.0%
CCGGAGTCATATCTGCCATT+AGG + chr3_4:63890452-63890471 None:intergenic 50.0%
GACTCACCTGCTTCTGTGTT+GGG + chr3_4:63890748-63890767 None:intergenic 50.0%
AGACTCACCTGCTTCTGTGT+TGG + chr3_4:63890749-63890768 None:intergenic 50.0%
ATAGCGTCAGGAACTGTCAG+AGG - chr3_4:63891030-63891049 Msa0513620:CDS 50.0%
TAGCGTCAGGAACTGTCAGA+GGG - chr3_4:63891031-63891050 Msa0513620:CDS 50.0%
GTCCTTCACTTGCAGACTAG+AGG - chr3_4:63891103-63891122 Msa0513620:CDS 50.0%
CACACACATAAGGACTAGGG+GGG + chr3_4:63891373-63891392 None:intergenic 50.0%
CCGGCAAGGTTATGGTTGAT+TGG + chr3_4:63891656-63891675 None:intergenic 50.0%
CCATAACCTTGCCGGATCTA+CGG - chr3_4:63891661-63891680 Msa0513620:CDS 50.0%
! TCTGAGGTGAGAACACTGTG+GGG + chr3_4:63891983-63892002 None:intergenic 50.0%
!! ATGGGCTAGCAATTCGAGCT+TGG - chr3_4:63892026-63892045 Msa0513620:intron 50.0%
GCCTAGATGGAGAAAAGAGG+AGG - chr3_4:63892184-63892203 Msa0513620:CDS 50.0%
CTACGCACTCACTCTTCTCC+CGG + chr3_4:63884825-63884844 None:intergenic 55.0%
! AATTGTTATCGGCGTCGGGG+AGG + chr3_4:63884991-63885010 None:intergenic 55.0%
!! CGTCGGAGTTGATTTGCCAC+CGG + chr3_4:63885015-63885034 None:intergenic 55.0%
GGGGTGGGAATAGAAGTAGG+AGG + chr3_4:63885067-63885086 None:intergenic 55.0%
GGAGGGGTGGGAATAGAAGT+AGG + chr3_4:63885070-63885089 None:intergenic 55.0%
GTACATGGAAGGAAGGGGAG+GGG + chr3_4:63885086-63885105 None:intergenic 55.0%
CGTACATGGAAGGAAGGGGA+GGG + chr3_4:63885087-63885106 None:intergenic 55.0%
TCGTACATGGAAGGAAGGGG+AGG + chr3_4:63885088-63885107 None:intergenic 55.0%
TTAGCACCACCACCACTACC+TGG + chr3_4:63886006-63886025 None:intergenic 55.0%
GTGATGCGTTGAAACGCGCT+AGG - chr3_4:63886079-63886098 Msa0513620:CDS 55.0%
ATGCGTTGAAACGCGCTAGG+AGG - chr3_4:63886082-63886101 Msa0513620:CDS 55.0%
AAACGCGCTAGGAGGCTTCT+TGG - chr3_4:63886090-63886109 Msa0513620:CDS 55.0%
CACGTGGAAAACCATTGGGC+AGG - chr3_4:63886517-63886536 Msa0513620:CDS 55.0%
AGCAGCCTGCTAGTGGGAAA+AGG - chr3_4:63886589-63886608 Msa0513620:CDS 55.0%
TCGGTACCAAATGAGGTCCC+AGG + chr3_4:63886972-63886991 None:intergenic 55.0%
ACAGCCAGACAGGTGACATC+AGG - chr3_4:63887049-63887068 Msa0513620:intron 55.0%
TGGCGGAGTTTGGTACTTGG+AGG - chr3_4:63887388-63887407 Msa0513620:intron 55.0%
GGCGGAGTTTGGTACTTGGA+GGG - chr3_4:63887389-63887408 Msa0513620:intron 55.0%
TGCTATCCAGCTAGGTGTGC+TGG - chr3_4:63887556-63887575 Msa0513620:intron 55.0%
! CTGCTCTGATTCCCGGTTTG+TGG + chr3_4:63887873-63887892 None:intergenic 55.0%
CACAAACCGGGAATCAGAGC+AGG - chr3_4:63887871-63887890 Msa0513620:intron 55.0%
AGAAGCTTCGGGTAGTGTGC+TGG - chr3_4:63888086-63888105 Msa0513620:intron 55.0%
GCAGGTTTATGCGGCTGGAA+TGG - chr3_4:63888196-63888215 Msa0513620:intron 55.0%
GCTCATTGGGCAGATCGGTT+AGG - chr3_4:63888375-63888394 Msa0513620:intron 55.0%
GTTAGGGCATGTGAGATGGC+AGG - chr3_4:63889729-63889748 Msa0513620:intron 55.0%
CTTGTATGGCGCTAGACGCT+CGG - chr3_4:63890302-63890321 Msa0513620:CDS 55.0%
GCGTTACTTCTCTGTCTCCC+AGG + chr3_4:63890643-63890662 None:intergenic 55.0%
CTGGAACCCAACACAGAAGC+AGG - chr3_4:63890739-63890758 Msa0513620:CDS 55.0%
GGGGGGCGGAATTTCTTACT+TGG + chr3_4:63891356-63891375 None:intergenic 55.0%
ACACATAAGGACTAGGGGGG+CGG + chr3_4:63891370-63891389 None:intergenic 55.0%
CCGTAGATCCGGCAAGGTTA+TGG + chr3_4:63891664-63891683 None:intergenic 55.0%
TGCCAGCTCCGTCAGAAGAT+GGG - chr3_4:63892008-63892027 Msa0513620:intron 55.0%
ATGGAAGGAAGGGGAGGGGT+GGG + chr3_4:63885082-63885101 None:intergenic 60.0%
! GGTGTGAGGCGGAAGCATGA+AGG + chr3_4:63885117-63885136 None:intergenic 60.0%
! GTGCAACCAGGTAGTGGTGG+TGG - chr3_4:63885997-63886016 Msa0513620:intron 60.0%
ACGACCTCCCACTGGCAGTT+TGG + chr3_4:63886047-63886066 None:intergenic 60.0%
!! ACCATTGGGCAGGGCATTGG+TGG - chr3_4:63886527-63886546 Msa0513620:CDS 60.0%
TCCACCAATGCCCTGCCCAA+TGG + chr3_4:63886531-63886550 None:intergenic 60.0%
AACCGGGAATCAGAGCAGGG+AGG - chr3_4:63887875-63887894 Msa0513620:intron 60.0%
TGCCTCCCTGCTCTGATTCC+CGG + chr3_4:63887880-63887899 None:intergenic 60.0%
CTGCTCCCCAGATCTGCACA+AGG + chr3_4:63888180-63888199 None:intergenic 60.0%
CTTGTGCAGATCTGGGGAGC+AGG - chr3_4:63888178-63888197 Msa0513620:intron 60.0%
TGGGCCAGTTTCACCCCTTG+AGG - chr3_4:63888216-63888235 Msa0513620:intron 60.0%
GTTAAGCTGGTCCCAAGGCC+AGG + chr3_4:63890053-63890072 None:intergenic 60.0%
CGAGCGTCTAGCGCCATACA+AGG + chr3_4:63890304-63890323 None:intergenic 60.0%
CGGAGCTGGCAGCATTTCTG+AGG + chr3_4:63891999-63892018 None:intergenic 60.0%
CTGCCAGCTCCGTCAGAAGA+TGG - chr3_4:63892007-63892026 Msa0513620:intron 60.0%
AGCCCATCTTCTGACGGAGC+TGG + chr3_4:63892013-63892032 None:intergenic 60.0%
GAAGTAGGAGGGGGTGAGGG+TGG + chr3_4:63885055-63885074 None:intergenic 65.0%
CATGGAAGGAAGGGGAGGGG+TGG + chr3_4:63885083-63885102 None:intergenic 65.0%
GGGGAGCAGGTTTATGCGGC+TGG - chr3_4:63888191-63888210 Msa0513620:intron 65.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 63884822 63892393 63884822 ID=Msa0513620;Name=Msa0513620
chr3_4 mRNA 63884822 63892393 63884822 ID=Msa0513620-mRNA-1;Parent=Msa0513620;Name=Msa0513620-mRNA-1;_AED=0.10;_eAED=0.10;_QI=149|1|0.94|1|1|1|18|204|1212
chr3_4 exon 63884822 63885082 63884822 ID=Msa0513620-mRNA-1:exon:16082;Parent=Msa0513620-mRNA-1
chr3_4 exon 63885168 63885335 63885168 ID=Msa0513620-mRNA-1:exon:16081;Parent=Msa0513620-mRNA-1
chr3_4 exon 63885533 63885746 63885533 ID=Msa0513620-mRNA-1:exon:16080;Parent=Msa0513620-mRNA-1
chr3_4 exon 63885859 63885921 63885859 ID=Msa0513620-mRNA-1:exon:16079;Parent=Msa0513620-mRNA-1
chr3_4 exon 63886039 63886181 63886039 ID=Msa0513620-mRNA-1:exon:16078;Parent=Msa0513620-mRNA-1
chr3_4 exon 63886455 63886631 63886455 ID=Msa0513620-mRNA-1:exon:16077;Parent=Msa0513620-mRNA-1
chr3_4 exon 63886703 63886898 63886703 ID=Msa0513620-mRNA-1:exon:16076;Parent=Msa0513620-mRNA-1
chr3_4 exon 63888427 63888498 63888427 ID=Msa0513620-mRNA-1:exon:16075;Parent=Msa0513620-mRNA-1
chr3_4 exon 63888607 63888718 63888607 ID=Msa0513620-mRNA-1:exon:16074;Parent=Msa0513620-mRNA-1
chr3_4 exon 63888813 63888888 63888813 ID=Msa0513620-mRNA-1:exon:16073;Parent=Msa0513620-mRNA-1
chr3_4 exon 63888978 63889028 63888978 ID=Msa0513620-mRNA-1:exon:16072;Parent=Msa0513620-mRNA-1
chr3_4 exon 63889119 63889200 63889119 ID=Msa0513620-mRNA-1:exon:16071;Parent=Msa0513620-mRNA-1
chr3_4 exon 63889290 63889487 63889290 ID=Msa0513620-mRNA-1:exon:16070;Parent=Msa0513620-mRNA-1
chr3_4 exon 63889592 63889714 63889592 ID=Msa0513620-mRNA-1:exon:16069;Parent=Msa0513620-mRNA-1
chr3_4 exon 63890030 63890178 63890030 ID=Msa0513620-mRNA-1:exon:16068;Parent=Msa0513620-mRNA-1
chr3_4 exon 63890290 63890414 63890290 ID=Msa0513620-mRNA-1:exon:16067;Parent=Msa0513620-mRNA-1
chr3_4 exon 63890507 63891958 63890507 ID=Msa0513620-mRNA-1:exon:16066;Parent=Msa0513620-mRNA-1
chr3_4 exon 63892064 63892393 63892064 ID=Msa0513620-mRNA-1:exon:16065;Parent=Msa0513620-mRNA-1
chr3_4 five_prime_UTR 63892245 63892393 63892245 ID=Msa0513620-mRNA-1:five_prime_utr;Parent=Msa0513620-mRNA-1
chr3_4 CDS 63892064 63892244 63892064 ID=Msa0513620-mRNA-1:cds;Parent=Msa0513620-mRNA-1
chr3_4 CDS 63890507 63891958 63890507 ID=Msa0513620-mRNA-1:cds;Parent=Msa0513620-mRNA-1
chr3_4 CDS 63890290 63890414 63890290 ID=Msa0513620-mRNA-1:cds;Parent=Msa0513620-mRNA-1
chr3_4 CDS 63890030 63890178 63890030 ID=Msa0513620-mRNA-1:cds;Parent=Msa0513620-mRNA-1
chr3_4 CDS 63889592 63889714 63889592 ID=Msa0513620-mRNA-1:cds;Parent=Msa0513620-mRNA-1
chr3_4 CDS 63889290 63889487 63889290 ID=Msa0513620-mRNA-1:cds;Parent=Msa0513620-mRNA-1
chr3_4 CDS 63889119 63889200 63889119 ID=Msa0513620-mRNA-1:cds;Parent=Msa0513620-mRNA-1
chr3_4 CDS 63888978 63889028 63888978 ID=Msa0513620-mRNA-1:cds;Parent=Msa0513620-mRNA-1
chr3_4 CDS 63888813 63888888 63888813 ID=Msa0513620-mRNA-1:cds;Parent=Msa0513620-mRNA-1
chr3_4 CDS 63888607 63888718 63888607 ID=Msa0513620-mRNA-1:cds;Parent=Msa0513620-mRNA-1
chr3_4 CDS 63888427 63888498 63888427 ID=Msa0513620-mRNA-1:cds;Parent=Msa0513620-mRNA-1
chr3_4 CDS 63886703 63886898 63886703 ID=Msa0513620-mRNA-1:cds;Parent=Msa0513620-mRNA-1
chr3_4 CDS 63886455 63886631 63886455 ID=Msa0513620-mRNA-1:cds;Parent=Msa0513620-mRNA-1
chr3_4 CDS 63886039 63886181 63886039 ID=Msa0513620-mRNA-1:cds;Parent=Msa0513620-mRNA-1
chr3_4 CDS 63885859 63885921 63885859 ID=Msa0513620-mRNA-1:cds;Parent=Msa0513620-mRNA-1
chr3_4 CDS 63885533 63885746 63885533 ID=Msa0513620-mRNA-1:cds;Parent=Msa0513620-mRNA-1
chr3_4 CDS 63885168 63885335 63885168 ID=Msa0513620-mRNA-1:cds;Parent=Msa0513620-mRNA-1
chr3_4 CDS 63885026 63885082 63885026 ID=Msa0513620-mRNA-1:cds;Parent=Msa0513620-mRNA-1
chr3_4 three_prime_UTR 63884822 63885025 63884822 ID=Msa0513620-mRNA-1:three_prime_utr;Parent=Msa0513620-mRNA-1
Gene Sequence

>Msa0513620

ATGTCAACATGGAAGATCCTCCCCGACGCCGATAACAATTACCGGTGGCAAATCAACTCCGACGACACTTCAAATGTTATTCCACCCTCACCCCCTCCTACTTCTATTCCCACCCCTCCCCTTCCTTCCATGTACGATCTTCTCCTTCATGCTTCCGCCTCACACCTTTTTCAACCTCAAGAGGAAGAAAATGCAATAGATGATAGTTTTGGCTTTGCGAATTCGCTTTTCAAGACAGCTTCTGGAAGAAAAGTTACTATTTCTTCTAACGGTCTTGTTAGAGCAAAGACGTTATTAGGATTGCATGAAGAAACTGTTGGTGCTAATATTCAAACACCTCAGAATGCTAAGAAATTTAAAGCTTTTCATCAAGACGAACCTCGTTTACAGGTAATAGATAGTTGTAAAAAGACCAGTGCTGCGTCGTTTCAAAGTCCTTTAGTTAGTAGATCGAAAAGTGGTTTTCAGAATAAAATTGTGCAACCAGATATTGGTAGTCGTAGTGGTGCTGGTGCTAAGCAAGCTCCGATAAAATTCCAAACTGGTGTTAGTAATATTCAAGCCCCTCAGAATGCTAGTTTTTTTGATGCTTTTGATGAAGAATTGCCTCATTTGCAGCTTATGGATAGTTGTAAAAAGACGAGTGCTGCGTCGTTTCAAAGTCCTTTAGTTGGTAGGTTGAACATGGGTTCTGAGAATAAAGTTGTGCATAGTGGTAGTGTTAGTGGTGCTAAGGATGCACCAATTAAGTTCCAATCTGTTGTTAGTAATATTCAAACCCCTCAGAATGCTGAAAAATTGCATGCTTTTGATGAAGAATTGCCTCATTTGCAGCTTATGGATAGTTGTAAAATGATGAGTTCCGCGTCATTTCAAAGTCCTTTAGTTGGTACGTTGAAGAATGGTTTTGAGAGTAAATTTGTGCAACCAGGTAGTGGTGGTGGTGCTAAGCAAGCTCCAATTAAATTCCAAACTGCCAGTGGGAGGTCGTTATCTATTTCTGGTGATGCGTTGAAACGCGCTAGGAGGCTTCTTGGTGATCCTGATTTGGGAGATTTCTTTGATGGTGGAGATTCGCTTTTCTCGTTTCTGGATCAGGGACAAACCAGCACAATCACTTCCTCTGTTGAAAGAAGTGAGAGTAAAAATACTCATACCCCTTTGGTACATCAAATGACACTAGAGAATAATCCCAATCACATGACAAAAAGTTTCACATACCCTTTGCAGCCTTCGAAACAAATGGAATTTTCAAATAAGCTTCGCAACGAAGGTAATGGGAATAACTTAATCGTGAAATTCGATGATGTTGTGAATGAAAGTGATTGTGGCCATAAAAGTAGCAAAGCTCCTGGACCGAAACCCTTGTATAACAAGAATGAAGTGGCTGACACGACAATAAAAAGTTCTTCATTGAATGGTTTTTCTTCAAGAATGGATTCACGTGGAAAACCATTGGGCAGGGCATTGGTGGATATTTCCAATACCGTTAAGACAGTCCATACAAATAATAAGCAGCCTGCTAGTGGGAAAAGGAGAATAGGATTAAATGCAACTGTTTCTTCCTTTAAAAAGCCTCGAATTTCCAATATCTCTACCTCTGGTGACCAAGATGTTCAATATTTTTCTAATGATTTGGCTCAATTATCCTCTGGTGCTTCTGGACTCAAAAGAAAGGTTTCTACCCGATATCCATTTCACTATCCAAGGATGCACATCAAGGAATTTTTTGCTGTTCCTCCATTAGAGCAAAAAGTGCATTCTCCCAATACAGCCAGACAGGTGACATCAGGTAATGCAGGAGCGTACATATTCCATGATGGCTCTGATAGTAATGGTATGGGAGCAGAAGCTTTCATCCATCTATTGACACAGCACGGAGCTTCCCTGCGTTTTGCCTCAAAAGAGTGGGTCTTGAATCATTACAAATGGATTGTATGGAAACTGGCATGCTATGAGAGATGCTATCCAGCTAGGTGTGCTGGAAAATTTCTGACTGTATCAAACGTGCTTGAGGAACTGAAGTACAGATATGAAAGAGAAGTGAATCATGGCCACCGGTCTACCATCAAGAAAATTCTTGAGGGGGATGGATTGCCTTCTTCAATGATGACTCTCTGTATATCTAGCATTCACTCTGATCATGTGCTTGACAGTGGGGCATTATCTGAGCCACAAACCGGGAATCAGAGCAGGGAGGCATTAAAAGTTGAATTAACTGATGGATGGTATTCTATAAATGCCATTTTAGATGTTCCATTGTCAAAGCAACTGGCTGCTGGAAGATTGTTTGTAGGACAGAAGCTTCGGATCTGGGGAGCAGGTTTATGCGGCTGGAATGGGCCAGTTTCACCCCTTGAGGTGTCATCAACAGTTAGTTTACTTCTTCACATAAATGGAACATATAGAGCTCATTGGGCAGATCGGTTAGGACTTTGTAAAGTTGCTGGTCCACCTTTGGCTTTCAAATGCATAAAAAGAAATGGCGGTTTAGTACCTCAAACTTTGGCAGGAATTACCCGAATATATCCCATTCTTTACAAAGAAAGGTTAAGCAGTGGACAATCTGTTGTAATATCAGAGAGGATGGAGAGTAAAATGATGGAGCTGCACAATCAAAGACGCTCGGCTGTTGTAGATAATATTGTTTCGGAGTATCAGAAGGAAATAACTGGTTCGCATATTTATGATTACGGCAATAGCGAAGGGGCTAAGATATATAAGATGCTGGAGACAGCTGCAGAACCCGAATTCCTAATGGCAGATATGACTCCGGAGCAACTTAGTTCTTTTGCTGCTTATAAGGCCAAATTAAATGCAAATAGACAGTCACAAATGGAAAGTTCAATTGAGAAAGCTTTGAAAGATTCTGGCCTGGGAGACAGAGAAGTAACGCCATTTATGAGGTTGCGTGTAGTTGGATTAACTTATAAAACTCAACGAGATAAGCCTAAAGAAGGCATAGTAACAATCTGGAACCCAACACAGAAGCAGCGTCAGGAACTGTCAGAGGGAGAAGCATATGCAATTGCAGGACTCATACCATTTGGCTCTGATTCGGATGTCCTTCACTTGCAGACTAGAGGATCTACTACCAAGTGGTTGCCATTATCTTCTAATGCAAAGGAACAGTTTAAGCCATTTTCCAATAATCGGAAATCAATACCATTGTCAGGTCTGAGTGACATCCCACTTTCCAACGAGTTCGATGTTGTTGCATTTGTTGTGCATGTGGGAAAGGTTTATACATCAAGTCAGCAAAAGAAGCAATGGATTTTTGTGACTGATGGATCCATCATGAATGGGTTACAGTCAGGAAAGTTTATCGACACATTGCTTGCCATTTGCTTTTGCTCCCCATTGTTTGATCATGATTCATTTCCACCAATCAACCATAACCTTGCCGGATCTACGGTTGGTTTCTGTAATCTTATAAAAAAAGAGAAGGACCATACAAACCATATATGGGTTGCTGATGCTAATGAAATTTCAACCTATTATTTGAAATTTGATTCCCCACAGTGTTCTCACCTCAGAAATGCTGCCAGCTCCGTCAGAAGATGGGCTAGCAATTCGAGCTTGATAATAGAGAAACTCAAGGAAAAGGTGTTGGGTATAGTTGGTGATTGTAAAGCCTAG

Protein sequence

>Msa0513620

MSTWKILPDADNNYRWQINSDDTSNVIPPSPPPTSIPTPPLPSMYDLLLHASASHLFQPQEEENAIDDSFGFANSLFKTASGRKVTISSNGLVRAKTLLGLHEETVGANIQTPQNAKKFKAFHQDEPRLQVIDSCKKTSAASFQSPLVSRSKSGFQNKIVQPDIGSRSGAGAKQAPIKFQTGVSNIQAPQNASFFDAFDEELPHLQLMDSCKKTSAASFQSPLVGRLNMGSENKVVHSGSVSGAKDAPIKFQSVVSNIQTPQNAEKLHAFDEELPHLQLMDSCKMMSSASFQSPLVGTLKNGFESKFVQPGSGGGAKQAPIKFQTASGRSLSISGDALKRARRLLGDPDLGDFFDGGDSLFSFLDQGQTSTITSSVERSESKNTHTPLVHQMTLENNPNHMTKSFTYPLQPSKQMEFSNKLRNEGNGNNLIVKFDDVVNESDCGHKSSKAPGPKPLYNKNEVADTTIKSSSLNGFSSRMDSRGKPLGRALVDISNTVKTVHTNNKQPASGKRRIGLNATVSSFKKPRISNISTSGDQDVQYFSNDLAQLSSGASGLKRKVSTRYPFHYPRMHIKEFFAVPPLEQKVHSPNTARQVTSGNAGAYIFHDGSDSNGMGAEAFIHLLTQHGASLRFASKEWVLNHYKWIVWKLACYERCYPARCAGKFLTVSNVLEELKYRYEREVNHGHRSTIKKILEGDGLPSSMMTLCISSIHSDHVLDSGALSEPQTGNQSREALKVELTDGWYSINAILDVPLSKQLAAGRLFVGQKLRIWGAGLCGWNGPVSPLEVSSTVSLLLHINGTYRAHWADRLGLCKVAGPPLAFKCIKRNGGLVPQTLAGITRIYPILYKERLSSGQSVVISERMESKMMELHNQRRSAVVDNIVSEYQKEITGSHIYDYGNSEGAKIYKMLETAAEPEFLMADMTPEQLSSFAAYKAKLNANRQSQMESSIEKALKDSGLGDREVTPFMRLRVVGLTYKTQRDKPKEGIVTIWNPTQKQRQELSEGEAYAIAGLIPFGSDSDVLHLQTRGSTTKWLPLSSNAKEQFKPFSNNRKSIPLSGLSDIPLSNEFDVVAFVVHVGKVYTSSQQKKQWIFVTDGSIMNGLQSGKFIDTLLAICFCSPLFDHDSFPPINHNLAGSTVGFCNLIKKEKDHTNHIWVADANEISTYYLKFDSPQCSHLRNAASSVRRWASNSSLIIEKLKEKVLGIVGDCKA*