AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0020540

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0020540 MtrunA17_Chr1g0171931 97.262 1388 28 3 1 1382 1 1384 0.0 2766
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0020540 AT3G57060.3 70.362 1272 350 10 1 1256 1 1261 0.0 1838
Msa0020540 AT3G57060.1 70.362 1272 350 10 1 1256 1 1261 0.0 1838
Msa0020540 AT3G57060.2 70.362 1272 350 10 1 1256 1 1261 0.0 1837

Find 314 sgRNAs with CRISPR-Local

Find 587 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCAAAGAAGTTTGCAAAAT+TGG 0.101126 1_1:-35563726 Msa0020540:CDS
TCAAAGCTTTGTAGAAATTT+TGG 0.106400 1_1:-35565360 Msa0020540:CDS
AATAATAGTGTTAGAATATT+TGG 0.138633 1_1:-35566030 Msa0020540:CDS
CAATCTTCTGTTGATGGATT+TGG 0.143554 1_1:+35563615 None:intergenic
ATGTTAGTTGATATCAATTT+TGG 0.153440 1_1:+35568195 None:intergenic
TATCGCAGATATCAGCTTTA+TGG 0.179154 1_1:-35566281 Msa0020540:intron
GCAGAAAAGGAAATTGTTTC+TGG 0.193555 1_1:-35565429 Msa0020540:CDS
ACTTCCATTGTTAGGGAAAT+TGG 0.198161 1_1:-35568303 Msa0020540:CDS
TTTGGCTTCCAGCAAATATT+TGG 0.229758 1_1:-35565981 Msa0020540:CDS
ATCCCTCAGTTCTGTTTATA+AGG 0.231793 1_1:-35565875 Msa0020540:CDS
TCTACAAAGCTTTGACAAAA+AGG 0.237517 1_1:+35565368 None:intergenic
TGCTGTCAATCTTCTGTTGA+TGG 0.244441 1_1:+35563609 None:intergenic
TGCTCTATGGCTGCAATGTC+AGG 0.248843 1_1:-35560796 Msa0020540:three_prime_UTR
TTACAAGACATCATTGATAT+TGG 0.252982 1_1:-35566150 Msa0020540:CDS
ATGTCAGCTGCTATGATTTC+TGG 0.254360 1_1:+35565907 None:intergenic
GTCTAAAGTTGATCCTTTAC+TGG 0.254602 1_1:-35566115 Msa0020540:CDS
AGGAGATGTTTGTAGGGTTT+TGG 0.257631 1_1:+35569945 None:intergenic
ATAAATGCTTTGTCTATAAA+TGG 0.262102 1_1:-35562329 Msa0020540:CDS
CGGTTCAAAGGACAAGAATT+TGG 0.269747 1_1:-35565406 Msa0020540:CDS
AGTTGGCACACTGGTCTCTA+AGG 0.298241 1_1:-35566983 Msa0020540:CDS
GATAAAATATACCTTCTTAA+TGG 0.298342 1_1:+35564226 None:intergenic
GTATCTTTGACATAATCTTT+TGG 0.300250 1_1:+35568270 None:intergenic
ATAGTTTAATTACTGGCTTT+TGG 0.305867 1_1:-35565999 Msa0020540:CDS
CACAAGGAGTCGTGTGCTTC+AGG 0.306091 1_1:-35567980 Msa0020540:CDS
AACCCGTGCATTCATGGAAT+TGG 0.309115 1_1:-35568737 Msa0020540:CDS
ACCAATGTGAAAGGTGAAAA+AGG 0.309165 1_1:-35562097 Msa0020540:CDS
CTCTTCTGTTGCGTTGGATC+TGG 0.311031 1_1:+35570075 None:intergenic
GAGAGGGAGGAGATGTTTGT+AGG 0.314010 1_1:+35569938 None:intergenic
TCAGGAAGCAAATTATATAT+TGG 0.321717 1_1:+35564323 None:intergenic
AATCTTCTGTTGATGGATTT+GGG 0.324531 1_1:+35563616 None:intergenic
AGTCCATGGTTCTAAAAGAT+TGG 0.329611 1_1:+35564741 None:intergenic
TACAAGACATCATTGATATT+GGG 0.330318 1_1:-35566149 Msa0020540:CDS
GCCTTGCAACTTCCATTGTT+AGG 0.335205 1_1:-35568311 Msa0020540:CDS
TGCAAGACTCAAGAGATTCT+TGG 0.336217 1_1:+35567047 None:intergenic
ATCGCAGATATCAGCTTTAT+GGG 0.340239 1_1:-35566280 Msa0020540:intron
CAGCTATCATTTACTGAAAA+GGG 0.343144 1_1:-35563933 Msa0020540:CDS
ATTCGACCGTGTTTACTCTT+TGG 0.348881 1_1:-35569831 Msa0020540:CDS
AGTAGGGTGAACAGCATAAA+TGG 0.350048 1_1:+35565930 None:intergenic
TGTAAGCAATTTCAAATTGA+TGG 0.350648 1_1:-35567409 Msa0020540:CDS
GACATCATTGATATTGGGTT+TGG 0.354628 1_1:-35566144 Msa0020540:CDS
GATGCCCTCTGTCGCATAAT+CGG 0.354852 1_1:-35568468 Msa0020540:CDS
AATATAGACCAATTGATTCA+TGG 0.354885 1_1:+35565756 None:intergenic
CAATGTCAGGGTTTGGACTT+TGG 0.359167 1_1:-35560783 Msa0020540:three_prime_UTR
TTACCAGGGGCAACATCTTT+CGG 0.364533 1_1:+35567371 None:intergenic
GTGGAGAGTCTTATAAGATT+AGG 0.370785 1_1:-35568149 Msa0020540:CDS
ATTCTCGATAGTTTAATTAC+TGG 0.376639 1_1:-35566006 Msa0020540:CDS
ACCAATGTGAAAGATGAAAA+TGG 0.377025 1_1:-35561871 Msa0020540:CDS
GAGTCGTGTGCTTCAGGTGT+GGG 0.377587 1_1:-35567974 Msa0020540:CDS
ACATACCTTAGGAGCATTGC+TGG 0.378045 1_1:+35569589 None:intergenic
ATGGCTGCAATGTCAGGGTT+TGG 0.378445 1_1:-35560790 Msa0020540:three_prime_UTR
TGTTAGGAAGAATGCGGTTC+TGG 0.378556 1_1:-35564680 Msa0020540:CDS
CTAATGTTGATTCGCTTTCA+AGG 0.378765 1_1:-35569727 Msa0020540:CDS
GAATGCTCTTGTAGCTGTGC+TGG 0.379406 1_1:-35568127 Msa0020540:CDS
AGAAACAACCCGTGCATTCA+TGG 0.381429 1_1:-35568743 Msa0020540:CDS
GCTAGCTTTGTGTCGATTGA+TGG 0.385561 1_1:-35564988 Msa0020540:CDS
AGCTTCATTTGAGGCAACTT+TGG 0.388735 1_1:-35567788 Msa0020540:CDS
TCCTTGGTAGTCCTGCTCTA+TGG 0.393109 1_1:-35560809 Msa0020540:three_prime_UTR
TTTCTTGAACTTTCCAAGAA+AGG 0.394942 1_1:-35564459 Msa0020540:intron
TCGAAGTCTAATACATCTTC+AGG 0.395081 1_1:-35563548 Msa0020540:intron
TCAGCTATCATTTACTGAAA+AGG 0.396538 1_1:-35563934 Msa0020540:CDS
GGCATTCTTGTTCCTCACTT+TGG 0.397944 1_1:-35568171 Msa0020540:CDS
ATGGTTGTTGTTGTCGTCTT+CGG 0.398381 1_1:+35569976 None:intergenic
CAGATATAGAAGTATCTTGT+AGG 0.400444 1_1:+35564701 None:intergenic
TTGATATTGGGTTTGGTCGT+TGG 0.402387 1_1:-35566137 Msa0020540:CDS
CGAGACGATGCTTGCGGTAC+AGG 0.402808 1_1:+35562290 None:intergenic
GCCGACACTTGTCCAATTGA+TGG 0.402959 1_1:-35567482 Msa0020540:CDS
GGTAAATACACTGACACCTT+TGG 0.404662 1_1:-35560913 Msa0020540:exon
GTCCATGGTTCTAAAAGATT+GGG 0.405308 1_1:+35564742 None:intergenic
CTTGAAAGCGAATCAACATT+AGG 0.408386 1_1:+35569728 None:intergenic
AAGCTAATCTGTTTGATTTG+CGG 0.410842 1_1:-35560885 Msa0020540:three_prime_UTR
AAGATACTTCTATATCTGTT+AGG 0.410881 1_1:-35564696 Msa0020540:CDS
AGAGGGAGGAGATGTTTGTA+GGG 0.411154 1_1:+35569939 None:intergenic
AATGATATAAATGCCGAGTT+AGG 0.414277 1_1:-35565498 Msa0020540:CDS
TTGTCTTAACCATGGGTGAT+TGG 0.417462 1_1:+35561999 None:intergenic
CAAAACACTAGAAGATGCTT+TGG 0.417679 1_1:+35562060 None:intergenic
GATAATTTGCTAAGTATGTC+AGG 0.420411 1_1:+35564305 None:intergenic
ATGCCCTCTGTCGCATAATC+GGG 0.421216 1_1:-35568467 Msa0020540:CDS
TTTGCGACTTGAACTGTGAT+TGG 0.423041 1_1:+35565814 None:intergenic
TTTAATTGCTTCCATTAAGA+AGG 0.423664 1_1:-35564237 Msa0020540:intron
GCAGCTCTTGAGTTTATAGT+TGG 0.425455 1_1:-35567000 Msa0020540:CDS
CCTTGCAACTTCCATTGTTA+GGG 0.425717 1_1:-35568310 Msa0020540:CDS
CAGAAGATGATGCCATCAAT+TGG 0.427958 1_1:+35567470 None:intergenic
CACATGGCCGATGCAGTTGC+TGG 0.429008 1_1:-35568360 Msa0020540:CDS
ACAACTTAAGTAGTCTAGAT+TGG 0.430489 1_1:-35560837 Msa0020540:three_prime_UTR
TTGGTTGCATCGCTTGAGGC+TGG 0.430759 1_1:-35567538 Msa0020540:CDS
TGCTCCAAGTTCCCAACATC+AGG 0.431005 1_1:+35567571 None:intergenic
ACTCGGAGCTGTGGACCAAA+TGG 0.432565 1_1:+35567811 None:intergenic
GAAAGGGTACATTAATGAAA+TGG 0.432956 1_1:-35564535 Msa0020540:CDS
TGTGCCTGATGTTGGGAACT+TGG 0.434082 1_1:-35567575 Msa0020540:CDS
TTGTCTTAACCATGGGTGAC+TGG 0.438592 1_1:+35562222 None:intergenic
GGTCGAATACGTCTTGGTCT+TGG 0.445031 1_1:+35569846 None:intergenic
AGGCAACTTTGGATCAGTAT+AGG 0.447151 1_1:-35567777 Msa0020540:CDS
GCTGCATACCAAATATTTGC+TGG 0.447487 1_1:+35565973 None:intergenic
TTCATTGCTCAGGTTCTGCT+TGG 0.447519 1_1:+35564283 None:intergenic
TGCTTTATCTGTCCTTTGCA+TGG 0.448568 1_1:-35566208 Msa0020540:CDS
ATTGCAGAAGCCTGTAGTTC+TGG 0.449315 1_1:+35565011 None:intergenic
AAAGACAAGTAACCTTCGTC+AGG 0.451756 1_1:+35568633 None:intergenic
TTTGACGAATTCTTCGAGTT+GGG 0.451987 1_1:+35569910 None:intergenic
AGATGAGAGAATTTCAAATC+TGG 0.452166 1_1:-35564493 Msa0020540:CDS
ACCCGTGCATTCATGGAATT+GGG 0.452467 1_1:-35568736 Msa0020540:CDS
CTTGGAGCAGACTAGGGCCT+TGG 0.453032 1_1:-35567557 Msa0020540:CDS
TGGTCATTGATGCAGACTTT+TGG 0.454378 1_1:-35564968 Msa0020540:intron
GAATCTCATTGCAAGCTCAT+TGG 0.454777 1_1:-35568691 Msa0020540:CDS
TGCAGAAAGATTCATTGCTC+AGG 0.455401 1_1:+35564273 None:intergenic
AGATTCTTGGCAGTTTCCAT+TGG 0.458277 1_1:+35567060 None:intergenic
CCCCATCGGAGATATTCAAT+TGG 0.459073 1_1:-35560677 Msa0020540:three_prime_UTR
TGGTTTGTGGAACGAGGTTG+CGG 0.460076 1_1:-35567920 Msa0020540:CDS
CACTAGGAGATTTAGCAGTA+AGG 0.461782 1_1:-35564768 Msa0020540:CDS
TTCGAGTTGGGAGGAGGAGA+GGG 0.463748 1_1:+35569922 None:intergenic
GTCTAGATTGGAAGTATCCT+TGG 0.464166 1_1:-35560825 Msa0020540:three_prime_UTR
GATTATGTCAAAGATACTAT+TGG 0.464511 1_1:-35568264 Msa0020540:CDS
AGAAAAGAGCTACTCGGTCT+AGG 0.465973 1_1:-35561831 Msa0020540:CDS
ATGTTGCAGCATAACCCATT+TGG 0.467413 1_1:-35567826 Msa0020540:CDS
TCAGCTTCTCTTCACAGTTG+TGG 0.467506 1_1:-35564833 Msa0020540:CDS
TCTTCAGTATCCAGAACTAC+AGG 0.468045 1_1:-35565021 Msa0020540:intron
ATCTAGACTACTTAAGTTGT+AGG 0.468608 1_1:+35560840 None:intergenic
CTTTGACGAATTCTTCGAGT+TGG 0.469018 1_1:+35569909 None:intergenic
AGGTGGTGGCCGCAAGTAGC+AGG 0.472720 1_1:-35568767 Msa0020540:CDS
TTGGGAACTTGGAGCAGACT+AGG 0.473783 1_1:-35567564 Msa0020540:CDS
TCATACAGCCATGAATCAAT+TGG 0.474870 1_1:-35565764 Msa0020540:CDS
GATTCTTGGCAGTTTCCATT+GGG 0.476024 1_1:+35567061 None:intergenic
TCACCCATGGTTAAGACAAC+AGG 0.477158 1_1:-35562218 Msa0020540:intron
ATTCTTGTTCCTCACTTTGG+TGG 0.478327 1_1:-35568168 Msa0020540:CDS
GAGGTTGCGGAAGTTGCTGC+TGG 0.479961 1_1:-35567907 Msa0020540:CDS
ATTAGACTTCGAGTGATCTT+CGG 0.483828 1_1:+35563559 None:intergenic
CTTGTCAGAGGATTCTGTTA+TGG 0.485956 1_1:-35563868 Msa0020540:CDS
ACTCAGTTTCGATTGGTTTG+TGG 0.486591 1_1:-35567933 Msa0020540:CDS
CCACATGGAAAAGAAGGAAC+AGG 0.486777 1_1:-35563657 Msa0020540:CDS
AAGCTATGTAATCGGTTTAG+TGG 0.488771 1_1:-35564109 Msa0020540:CDS
GCTCCGAGTAGCTTCATTTG+AGG 0.488817 1_1:-35567797 Msa0020540:CDS
TGGTGGAAAAGCTATGTAAT+CGG 0.489684 1_1:-35564117 Msa0020540:CDS
AAGACATCAACTGGTGTGCT+TGG 0.489686 1_1:-35566180 Msa0020540:CDS
AGTTCTGTTTATAAGGATTG+TGG 0.492770 1_1:-35565868 Msa0020540:CDS
AGATGACAAGGCAAAATTGT+TGG 0.492878 1_1:-35566055 Msa0020540:CDS
TAAGTTCCACATGGAAAAGA+AGG 0.493192 1_1:-35563663 Msa0020540:CDS
AGCAATGGCACAGCATCAAC+CGG 0.493997 1_1:-35565658 Msa0020540:CDS
CTACGAAATTCAAATGAAAG+TGG 0.494219 1_1:+35570126 None:intergenic
AGTACTACAGGACAGACAAA+TGG 0.495266 1_1:-35564146 Msa0020540:intron
GAGATTCTCTAAATGTATAG+AGG 0.495307 1_1:-35567512 Msa0020540:CDS
TTATAGGAGCTCAACGGTCC+AGG 0.495582 1_1:-35562129 Msa0020540:intron
AATTGTTTCTGGCGGTTCAA+AGG 0.497543 1_1:-35565418 Msa0020540:CDS
AATTCAAATGAAAGTGGAAG+TGG 0.497809 1_1:+35570132 None:intergenic
AAGAGTGCGAGGGAAGATGA+AGG 0.498519 1_1:+35570024 None:intergenic
CTCTGACAAGGCATGTTCAT+AGG 0.498818 1_1:+35563881 None:intergenic
GAAACTTGCAAAAGAGAGAA+AGG 0.502003 1_1:-35565704 Msa0020540:CDS
CACTAGACTGTGTCGTGTAA+TGG 0.507349 1_1:+35568427 None:intergenic
CTCGGAGCTGTGGACCAAAT+GGG 0.508193 1_1:+35567812 None:intergenic
GAAGATGAAGGTTGGAGCCA+TGG 0.509622 1_1:+35570036 None:intergenic
AGTCGTGTGCTTCAGGTGTG+GGG 0.511122 1_1:-35567973 Msa0020540:CDS
CGGAGGGTGAATCTTGTTCG+AGG 0.511388 1_1:+35569996 None:intergenic
TCAAAGGACAAGAATTTGGT+TGG 0.512463 1_1:-35565402 Msa0020540:CDS
AATGCTCTTGTAGCTGTGCT+GGG 0.514061 1_1:-35568126 Msa0020540:CDS
CCCTAACAATGGAAGTTGCA+AGG 0.516451 1_1:+35568310 None:intergenic
CTTTCAGTACAATATACATA+AGG 0.517800 1_1:-35567089 Msa0020540:CDS
GGAAGTTGCTGCTGGGAGAT+TGG 0.517813 1_1:-35567899 Msa0020540:CDS
TAACCTCTTGTCTTAACCAT+GGG 0.517892 1_1:+35561992 None:intergenic
GTCGTGTGCTTCAGGTGTGG+GGG 0.518289 1_1:-35567972 Msa0020540:CDS
TAATGTTGATTCGCTTTCAA+GGG 0.519008 1_1:-35569726 Msa0020540:CDS
CAAGCTGTCCTTGCCAGTAA+AGG 0.519378 1_1:+35566102 None:intergenic
GAATTCTTCGAGTTGGGAGG+AGG 0.521064 1_1:+35569916 None:intergenic
CTATCACTACCATTCTGCAT+AGG 0.521697 1_1:+35567601 None:intergenic
CGTGTTTACTCTTTGGTTCG+CGG 0.522992 1_1:-35569824 Msa0020540:CDS
AGATTCCAGCAATGCTCCTA+AGG 0.522995 1_1:-35569594 Msa0020540:intron
ATGGTTGAAAAGACATCAAC+TGG 0.523260 1_1:-35566189 Msa0020540:CDS
TTCCAATTGAATATCTCCGA+TGG 0.524576 1_1:+35560675 None:intergenic
TTCGGCACCAGCAACTGCAT+CGG 0.524585 1_1:+35568353 None:intergenic
TCCAATTGAATATCTCCGAT+GGG 0.525775 1_1:+35560676 None:intergenic
GTGCGAGGGAAGATGAAGGT+TGG 0.526514 1_1:+35570028 None:intergenic
CTCCCAATTCCATGAATGCA+CGG 0.527441 1_1:+35568734 None:intergenic
ATACAATTCTCTTGTTGATG+AGG 0.528194 1_1:-35567432 Msa0020540:CDS
ACCACGGCTTTGCTCTGCGG+TGG 0.529418 1_1:+35566230 None:intergenic
AACAATATTAAGAAGAAAGT+AGG 0.529692 1_1:+35569625 None:intergenic
CTGCTATGATTTCTGGAGTA+GGG 0.530319 1_1:+35565914 None:intergenic
ACGCACTAAACAAGCTATGT+TGG 0.530440 1_1:-35568040 Msa0020540:CDS
GATAGTAGTGTGCCTGATGT+TGG 0.531226 1_1:-35567583 Msa0020540:CDS
CTTCGAGTTGGGAGGAGGAG+AGG 0.531303 1_1:+35569921 None:intergenic
ATCAACAGAAGATTGACAGC+AGG 0.531311 1_1:-35563607 Msa0020540:CDS
GCTGCTATGATTTCTGGAGT+AGG 0.532010 1_1:+35565913 None:intergenic
TAAATCAATCTTTGAAGCAG+TGG 0.533578 1_1:-35567118 Msa0020540:CDS
TCATTTCTCTATCAGGTGAA+AGG 0.533590 1_1:-35564552 Msa0020540:intron
TGGAGCCATGGAAGAGAGAG+AGG 0.534757 1_1:+35570048 None:intergenic
GTAATGGTACTTTGTGGAGC+AGG 0.535079 1_1:+35568443 None:intergenic
CAGAAGATTGACAGCAGGGA+AGG 0.535424 1_1:-35563602 Msa0020540:CDS
TATCACTACCATTCTGCATA+GGG 0.536682 1_1:+35567602 None:intergenic
GTAATTGATACAAGCACTGA+AGG 0.538621 1_1:-35562353 Msa0020540:CDS
CATTTCTCTATCAGGTGAAA+GGG 0.540050 1_1:-35564551 Msa0020540:intron
TCTGTGTGGAAGCGTACCGT+TGG 0.540812 1_1:+35570098 None:intergenic
GGCCTTGGTTGCATCGCTTG+AGG 0.543570 1_1:-35567542 Msa0020540:CDS
CCTTCCAATTTCCCTAACAA+TGG 0.544985 1_1:+35568299 None:intergenic
GGAACTTAAAACTTACATTG+AGG 0.545490 1_1:-35563705 Msa0020540:CDS
AGCCTCAAGCGATGCAACCA+AGG 0.547090 1_1:+35567540 None:intergenic
AGCTGCTAGATCTCCTGTGT+TGG 0.547805 1_1:+35567017 None:intergenic
TCGTGTGCTTCAGGTGTGGG+GGG 0.550787 1_1:-35567971 Msa0020540:CDS
GAGGAACACTCAGTTTCGAT+TGG 0.551052 1_1:-35567940 Msa0020540:CDS
GAAAACCTCTCTCTCTTCCA+TGG 0.553200 1_1:-35570053 Msa0020540:exon
TATAGAAGTATCTTGTAGGC+GGG 0.553527 1_1:+35564705 None:intergenic
GCTCTATGGCTGCAATGTCA+GGG 0.554113 1_1:-35560795 Msa0020540:three_prime_UTR
GATGCAGAGGATTTCTCTGT+CGG 0.554207 1_1:+35569868 None:intergenic
TCATTGTCAGAACCTTCTGA+AGG 0.554412 1_1:+35567733 None:intergenic
AAGCGAGTACGAAGAACATT+CGG 0.554581 1_1:-35568065 Msa0020540:CDS
TAACCTGTTGTCTTAACCAT+GGG 0.555535 1_1:+35562215 None:intergenic
ATTGGGAGCCACAGAGAGCT+CGG 0.555565 1_1:-35568719 Msa0020540:CDS
GGAGTCGTGTGCTTCAGGTG+TGG 0.555573 1_1:-35567975 Msa0020540:CDS
ATTGATTGAATCAGATCAAG+TGG 0.558340 1_1:-35562032 Msa0020540:CDS
ATTGATTGAATCAGATCAAG+TGG 0.558340 1_1:-35562255 Msa0020540:CDS
TGATTGCACCTTCTGTGTAC+CGG 0.558744 1_1:+35565639 None:intergenic
TTGTTTCTTCCTGCTACTTG+CGG 0.559690 1_1:+35568758 None:intergenic
CATACTAAATGACATGATGA+AGG 0.560185 1_1:-35564644 Msa0020540:intron
GCCATCAATTGGACAAGTGT+CGG 0.560387 1_1:+35567481 None:intergenic
GACGAATTCTTCGAGTTGGG+AGG 0.561426 1_1:+35569913 None:intergenic
TACTATTGGTGCTGAAAATG+TGG 0.561961 1_1:-35568250 Msa0020540:CDS
TGCATGAAAACATACTGTGC+TGG 0.562212 1_1:+35566948 None:intergenic
GGACAGACAAATGGAAGCAC+TGG 0.562649 1_1:-35564137 Msa0020540:CDS
AAAGAGCTTGAGCCTTCAGA+AGG 0.562863 1_1:-35567745 Msa0020540:CDS
ATAGTAGTGTGCCTGATGTT+GGG 0.563989 1_1:-35567582 Msa0020540:CDS
TGAGTTTATAGTTGGCACAC+TGG 0.565695 1_1:-35566992 Msa0020540:CDS
GTTGTTGTTGTCGTCTTCGG+AGG 0.565733 1_1:+35569979 None:intergenic
AGTTGCTGCTGGGAGATTGG+AGG 0.565849 1_1:-35567896 Msa0020540:CDS
TTCGATTGGTTTGTGGAACG+AGG 0.566074 1_1:-35567926 Msa0020540:CDS
AAGTTGATCCTTTACTGGCA+AGG 0.566127 1_1:-35566110 Msa0020540:CDS
CTTGTGAATAAGATGCATGA+TGG 0.571692 1_1:+35568401 None:intergenic
ATTAAAACAACCAATGTGAA+AGG 0.576043 1_1:-35562106 Msa0020540:CDS
CTCTACAGATGTCAGACAGT+GGG 0.577605 1_1:-35563979 Msa0020540:intron
CTAACCTCTTGTCTTAACCA+TGG 0.577710 1_1:+35561991 None:intergenic
CAGACAAATGGAAGCACTGG+TGG 0.578868 1_1:-35564134 Msa0020540:CDS
TGACATTGCAGCCATAGAGC+AGG 0.579227 1_1:+35560798 None:intergenic
GTTGGCACACTGGTCTCTAA+GGG 0.581531 1_1:-35566982 Msa0020540:CDS
GCCGAAAAGAAGTATTCAGA+TGG 0.583200 1_1:-35568336 Msa0020540:CDS
TCTCCGAAAGATGTTGCCCC+TGG 0.583816 1_1:-35567374 Msa0020540:intron
TGGGAACTTGGAGCAGACTA+GGG 0.584083 1_1:-35567563 Msa0020540:CDS
TCCCAATTCCATGAATGCAC+GGG 0.584659 1_1:+35568735 None:intergenic
GGCCCCGATTATGCGACAGA+GGG 0.586679 1_1:+35568464 None:intergenic
AATCGGTTTAGTGGTGTCAC+AGG 0.586732 1_1:-35564100 Msa0020540:intron
GAGTTGGGAGGAGGAGAGGG+AGG 0.588726 1_1:+35569925 None:intergenic
CAGAAAGCCTCTCGATAGCA+AGG 0.588973 1_1:+35566079 None:intergenic
TCTAATTGCACTATTGCACT+AGG 0.589127 1_1:-35564784 Msa0020540:CDS
CGTCTTGGTCTTGGATGCAG+AGG 0.590940 1_1:+35569855 None:intergenic
ATCCTTATAAACAGAACTGA+GGG 0.592079 1_1:+35565873 None:intergenic
CCATTGTTAGGGAAATTGGA+AGG 0.592278 1_1:-35568299 Msa0020540:CDS
GACTGATACATTCATGTCAC+AGG 0.592694 1_1:-35567638 Msa0020540:CDS
CTGTGTGGAAGCGTACCGTT+GGG 0.595206 1_1:+35570099 None:intergenic
TTGTTGTTGTCGTCTTCGGA+GGG 0.596039 1_1:+35569980 None:intergenic
GATGCAATCCCTATGCAGAA+TGG 0.596545 1_1:-35567610 Msa0020540:CDS
TGTCGTGTAATGGTACTTTG+TGG 0.598438 1_1:+35568437 None:intergenic
TTGCCTCAAATGAAGCTACT+CGG 0.602139 1_1:+35567794 None:intergenic
AAGAGAGAAAGGACATTGAG+AGG 0.603969 1_1:-35565693 Msa0020540:CDS
AGGTTGCGGAAGTTGCTGCT+GGG 0.606891 1_1:-35567906 Msa0020540:CDS
AAATTGATATCAACTAACAT+TGG 0.608940 1_1:-35568192 Msa0020540:CDS
AGCATCAACCGGTACACAGA+AGG 0.612351 1_1:-35565647 Msa0020540:intron
CATAACAGAATCCTCTGACA+AGG 0.612594 1_1:+35563869 None:intergenic
CCAATTGAATATCTCCGATG+GGG 0.613273 1_1:+35560677 None:intergenic
CTATGAACATGCCTTGTCAG+AGG 0.613866 1_1:-35563880 Msa0020540:CDS
CAGCTTGCCTTGCTATCGAG+AGG 0.614048 1_1:-35566086 Msa0020540:CDS
TTGAAGCTGTTGAGAAGGAG+CGG 0.615411 1_1:-35567672 Msa0020540:CDS
CGCGAACCAAAGAGTAAACA+CGG 0.616453 1_1:+35569825 None:intergenic
TCACCCATGGTTAAGACAAG+AGG 0.616547 1_1:-35561995 Msa0020540:intron
TCTGTTTATAAGGATTGTGG+TGG 0.617980 1_1:-35565865 Msa0020540:CDS
CTTGCAACTGATTCCAACAC+AGG 0.619910 1_1:-35567030 Msa0020540:CDS
GAAAAGGAAATTGTTTCTGG+CGG 0.619917 1_1:-35565426 Msa0020540:CDS
AATGAAGCTACTCGGAGCTG+TGG 0.620295 1_1:+35567802 None:intergenic
TCGAGGTGTTGAAGAGTGCG+AGG 0.621611 1_1:+35570013 None:intergenic
AGAGGCTGCAAATCCTAACT+CGG 0.622462 1_1:+35565485 None:intergenic
TCAACAGAAGATTGACAGCA+GGG 0.622646 1_1:-35563606 Msa0020540:CDS
CAACTCGAAGAATTCGTCAA+AGG 0.623065 1_1:-35569908 Msa0020540:CDS
ACTATTGGTGCTGAAAATGT+GGG 0.623216 1_1:-35568249 Msa0020540:CDS
GAAGAACAGCGAGATTAGAA+CGG 0.624036 1_1:+35569753 None:intergenic
TTGGACAAGTGTCGGCATTG+TGG 0.624575 1_1:+35567489 None:intergenic
GGATACAACATGTTTAACAG+TGG 0.624674 1_1:-35560762 Msa0020540:three_prime_UTR
AAACACGGTCGAATACGTCT+TGG 0.624885 1_1:+35569840 None:intergenic
AAACTCTAACGTGGATGGTG+AGG 0.626136 1_1:-35567710 Msa0020540:CDS
CTAACCTGTTGTCTTAACCA+TGG 0.626289 1_1:+35562214 None:intergenic
AGCTATCATTTACTGAAAAG+GGG 0.626387 1_1:-35563932 Msa0020540:CDS
TATTGAAGTCCAGTCACCCA+TGG 0.626690 1_1:-35562231 Msa0020540:CDS
GGTTCATCTGACCCTGACGA+AGG 0.627950 1_1:-35568645 Msa0020540:CDS
GTGCAATAGTGCAATTAGAA+CGG 0.629695 1_1:+35564788 None:intergenic
ATATAGAAGTATCTTGTAGG+CGG 0.631163 1_1:+35564704 None:intergenic
GTTAGGATTTGCAGCCTCTG+AGG 0.631609 1_1:-35565481 Msa0020540:CDS
AGCACCACGGCTTTGCTCTG+CGG 0.632576 1_1:+35566227 None:intergenic
TGCGTTGGATCTGGTCTGTG+TGG 0.634791 1_1:+35570084 None:intergenic
ACATCAAAACACAATTACAC+AGG 0.636111 1_1:+35560581 None:intergenic
AGGCCCCGATTATGCGACAG+AGG 0.637694 1_1:+35568463 None:intergenic
TTCAGTATCCGAGCTCTCTG+TGG 0.638208 1_1:+35568711 None:intergenic
TGCCCTCTGTCGCATAATCG+GGG 0.638428 1_1:-35568466 Msa0020540:CDS
GTTGGAATCTTTCAAAAGCG+CGG 0.642116 1_1:+35568497 None:intergenic
GCCATAGAGCAGGACTACCA+AGG 0.644343 1_1:+35560808 None:intergenic
TATTGAAGTCCAATCACCCA+TGG 0.644418 1_1:-35562008 Msa0020540:CDS
GAATTTCGTAGTTAACCCAA+CGG 0.646181 1_1:-35570114 Msa0020540:five_prime_UTR
CAGCAACTGCATCGGCCATG+TGG 0.647912 1_1:+35568361 None:intergenic
CGAGGTGTTGAAGAGTGCGA+GGG 0.649241 1_1:+35570014 None:intergenic
TCACCAAGAAAAGAGCTACT+CGG 0.649338 1_1:-35561837 Msa0020540:CDS
AATCCTTATAAACAGAACTG+AGG 0.650673 1_1:+35565872 None:intergenic
AAAGAGCTACTCGGTCTAGG+AGG 0.651168 1_1:-35561828 Msa0020540:intron
ACCACCGCAGAGCAAAGCCG+TGG 0.651933 1_1:-35566231 Msa0020540:CDS
TAAGACTCTCCACCAAAGTG+AGG 0.651984 1_1:+35568159 None:intergenic
TATATCTGTTAGGAAGAATG+CGG 0.652410 1_1:-35564686 Msa0020540:CDS
AGGCAGAGTACAGACAGCAA+TGG 0.655449 1_1:-35565673 Msa0020540:CDS
ATGCTCTTGTAGCTGTGCTG+GGG 0.660356 1_1:-35568125 Msa0020540:CDS
GGGATGTTTCTGCTTACACA+AGG 0.662146 1_1:-35567996 Msa0020540:CDS
AATGAAAACTCTAACGTGGA+TGG 0.662520 1_1:-35567715 Msa0020540:CDS
TAATTGATACAAGCACTGAA+GGG 0.664491 1_1:-35562352 Msa0020540:CDS
GAGGCTTTCTGAAGATGACA+AGG 0.668391 1_1:-35566067 Msa0020540:CDS
TGACAATGAAAACTCTAACG+TGG 0.672314 1_1:-35567719 Msa0020540:CDS
AAGACAAGTAACCTTCGTCA+GGG 0.675567 1_1:+35568634 None:intergenic
TAAGCTGAATAAGTTCCACA+TGG 0.680330 1_1:-35563672 Msa0020540:CDS
TGCTAATTATAGGAGCTCAA+CGG 0.680441 1_1:-35561909 Msa0020540:intron
AGTGGAGCACTTCTTCTCAG+AGG 0.683629 1_1:-35560744 Msa0020540:three_prime_UTR
TAGAACGGAGACTTTCAACA+AGG 0.683792 1_1:+35569768 None:intergenic
AAAGCACGAGACGATGCTTG+CGG 0.687855 1_1:+35562284 None:intergenic
ATCAAGTGCAGCATCCTCAG+AGG 0.688166 1_1:+35565467 None:intergenic
TCTCTACAGATGTCAGACAG+TGG 0.689804 1_1:-35563980 Msa0020540:intron
TGCCAATTATAGGAGCTCAA+CGG 0.696052 1_1:-35562135 Msa0020540:intron
CATTACGATGAGAAGCAACA+CGG 0.700562 1_1:+35569663 None:intergenic
CTATTGGTGCTGAAAATGTG+GGG 0.723034 1_1:-35568248 Msa0020540:CDS
AAAGGACAGATAAAGCACCA+CGG 0.791205 1_1:+35566214 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTCTAATTAGTAATATTAT+AGG - chr1_1:35561193-35561212 Msa0020540:intron 10.0%
!! ACAAATTAAAAAATTAATTG+TGG + chr1_1:35561392-35561411 None:intergenic 10.0%
!!! TTGAAATTTTAAATATGATT+TGG - chr1_1:35564155-35564174 Msa0020540:intron 10.0%
!! AAATTAAACAAGAAAATAAA+AGG + chr1_1:35566927-35566946 None:intergenic 10.0%
!! AAATAGATATAATATATTTG+AGG - chr1_1:35567392-35567411 Msa0020540:CDS 10.0%
!! AATAGATATAATATATTTGA+GGG - chr1_1:35567393-35567412 Msa0020540:CDS 10.0%
!!! TTCATATTTTCAATTTATTT+TGG - chr1_1:35569535-35569554 Msa0020540:intron 10.0%
!!! TCATATTTTCAATTTATTTT+GGG - chr1_1:35569536-35569555 Msa0020540:intron 10.0%
!! ACAATGAAAAAGTAATTTAA+AGG + chr1_1:35561162-35561181 None:intergenic 15.0%
!! ATTAGTAATATTATAGGTTA+AGG - chr1_1:35561199-35561218 Msa0020540:intron 15.0%
!! AATTAAAAAATTAATTGTGG+AGG + chr1_1:35561389-35561408 None:intergenic 15.0%
!!! AAGATTTTACGATAAATTTT+AGG - chr1_1:35561426-35561445 Msa0020540:intron 15.0%
!!! TATATTTTATACCTAGAATT+AGG - chr1_1:35563830-35563849 Msa0020540:intron 15.0%
!! TCATGTTTGTAAAAAAATAT+AGG + chr1_1:35563967-35563986 None:intergenic 15.0%
!! TTAAATATTTGATGTAAACA+AGG - chr1_1:35564094-35564113 Msa0020540:intron 15.0%
!! AAAATTTCAATTTGAAAACT+GGG + chr1_1:35564145-35564164 None:intergenic 15.0%
!! TAAAATTTCAATTTGAAAAC+TGG + chr1_1:35564146-35564165 None:intergenic 15.0%
!! AATAATAGTGTTAGAATATT+TGG - chr1_1:35564662-35564681 Msa0020540:CDS 15.0%
!! AACATCTTCATTTAATTATA+AGG + chr1_1:35565808-35565827 None:intergenic 15.0%
!! ACTGTTTGTATTTAAAAAAA+GGG + chr1_1:35566629-35566648 None:intergenic 15.0%
!! AACTGTTTGTATTTAAAAAA+AGG + chr1_1:35566630-35566649 None:intergenic 15.0%
!!! TTTTAGAAACATATTAAACA+AGG - chr1_1:35566851-35566870 Msa0020540:intron 15.0%
!!! TTATGTTTTAAATTGAAATC+AGG - chr1_1:35566945-35566964 Msa0020540:intron 15.0%
!! ATATTATATCTATTTACAGT+TGG + chr1_1:35567387-35567406 None:intergenic 15.0%
!!! TATAATTTTGCAATATAAAC+CGG - chr1_1:35569642-35569661 Msa0020540:CDS 15.0%
!! ATGAATCATATTAAAATTTC+CGG + chr1_1:35569664-35569683 None:intergenic 15.0%
!! GGAAAAATATAATACAAAAT+AGG + chr1_1:35569997-35570016 None:intergenic 15.0%
!! TAACAAAAAAAATAGTACTT+TGG - chr1_1:35570080-35570099 Msa0020540:five_prime_UTR 15.0%
!! AACAATATTAAGAAGAAAGT+AGG + chr1_1:35561070-35561089 None:intergenic 20.0%
!!! AAATCAATTTTGTATACTTG+TGG - chr1_1:35561316-35561335 Msa0020540:intron 20.0%
!!! AAACATGTCAAAATCAATTT+TGG + chr1_1:35561347-35561366 None:intergenic 20.0%
!!! AAAATTGATTTTGACATGTT+TGG - chr1_1:35561346-35561365 Msa0020540:intron 20.0%
!!! AAACATGTCAAAATCAATTT+TGG + chr1_1:35561347-35561366 None:intergenic 20.0%
!!! AAAATTGATTTTGACATGTT+TGG - chr1_1:35561346-35561365 Msa0020540:intron 20.0%
!! GTAAAGTGATTATTAATGTT+CGG + chr1_1:35561698-35561717 None:intergenic 20.0%
!!! ATAAACCTTGAATTACTTTT+TGG - chr1_1:35562026-35562045 Msa0020540:CDS 20.0%
!! GTTAACAAAATTAAGAAAGA+AGG + chr1_1:35562108-35562127 None:intergenic 20.0%
!!! TAATTTTGTTAACACTAAAC+AGG - chr1_1:35562115-35562134 Msa0020540:CDS 20.0%
!!! TTGATATCAATTTTGGAATA+CGG + chr1_1:35562493-35562512 None:intergenic 20.0%
!!! ATGTTAGTTGATATCAATTT+TGG + chr1_1:35562500-35562519 None:intergenic 20.0%
!! AAATTGATATCAACTAACAT+TGG - chr1_1:35562500-35562519 Msa0020540:intron 20.0%
!! TGAAATTTATTCTTTCTTTC+TGG - chr1_1:35563518-35563537 Msa0020540:intron 20.0%
!! CTGTCAAATTCTTATAAATT+TGG - chr1_1:35565150-35565169 Msa0020540:intron 20.0%
!!! AAGATAGTTCATTTTTATGA+AGG + chr1_1:35565395-35565414 None:intergenic 20.0%
!! GATAAAATATACCTTCTTAA+TGG + chr1_1:35566469-35566488 None:intergenic 20.0%
!! CTGTTTGTATTTAAAAAAAG+GGG + chr1_1:35566628-35566647 None:intergenic 20.0%
!! TTAAGTAGTTTATGTGAAAA+TGG - chr1_1:35566895-35566914 Msa0020540:intron 20.0%
!!! TCTTAAACTTTAAAATGTTC+CGG - chr1_1:35567173-35567192 Msa0020540:intron 20.0%
!!! AATTTTTATCATCTAGCATA+TGG - chr1_1:35567437-35567456 Msa0020540:CDS 20.0%
!! TTTGTAATTAATCCTTTGAT+AGG + chr1_1:35567694-35567713 None:intergenic 20.0%
!! ACATTGGAAACAATTTATAA+TGG - chr1_1:35568024-35568043 Msa0020540:CDS 20.0%
!! CATTGGAAACAATTTATAAT+GGG - chr1_1:35568025-35568044 Msa0020540:CDS 20.0%
!! AGAAAAAATATATGATGTTG+AGG - chr1_1:35568206-35568225 Msa0020540:CDS 20.0%
!! GAAAAAATATATGATGTTGA+GGG - chr1_1:35568207-35568226 Msa0020540:CDS 20.0%
!! ATAAATGCTTTGTCTATAAA+TGG - chr1_1:35568363-35568382 Msa0020540:CDS 20.0%
!! GACAATGATATTAAACTATA+AGG + chr1_1:35569354-35569373 None:intergenic 20.0%
!!! ATGTCTAGTTTTACTTCTAA+TGG - chr1_1:35561515-35561534 Msa0020540:intron 25.0%
!!! TGTCTAGTTTTACTTCTAAT+GGG - chr1_1:35561516-35561535 Msa0020540:intron 25.0%
! ATGAACCAAAAAGTAATTCA+AGG + chr1_1:35562034-35562053 None:intergenic 25.0%
!! GTATCTTTGACATAATCTTT+TGG + chr1_1:35562425-35562444 None:intergenic 25.0%
! GATTATGTCAAAGATACTAT+TGG - chr1_1:35562428-35562447 Msa0020540:intron 25.0%
!!! AAAGCTTTTAAGGATATTGA+TGG - chr1_1:35562602-35562621 Msa0020540:intron 25.0%
!! AAATTTTACTTGAGAGATGT+AGG - chr1_1:35562675-35562694 Msa0020540:intron 25.0%
!! AATTTTACTTGAGAGATGTA+GGG - chr1_1:35562676-35562695 Msa0020540:intron 25.0%
! TGTAAGCAATTTCAAATTGA+TGG - chr1_1:35563283-35563302 Msa0020540:intron 25.0%
! TTAGACAATAGAAAGAACTA+CGG + chr1_1:35563348-35563367 None:intergenic 25.0%
! CTTTCAGTACAATATACATA+AGG - chr1_1:35563603-35563622 Msa0020540:CDS 25.0%
!! ATGCCTCTAAATTTTTCTTT+AGG - chr1_1:35563805-35563824 Msa0020540:intron 25.0%
! AGTCCTAAAGAAAAATTTAG+AGG + chr1_1:35563811-35563830 None:intergenic 25.0%
!! AGAAGTGTAAACTTGAAAAT+TGG + chr1_1:35563901-35563920 None:intergenic 25.0%
! ACACTTCTATATTTCATTTC+TGG - chr1_1:35563913-35563932 Msa0020540:CDS 25.0%
! CACTTCTATATTTCATTTCT+GGG - chr1_1:35563914-35563933 Msa0020540:CDS 25.0%
! ACTTCTATATTTCATTTCTG+GGG - chr1_1:35563915-35563934 Msa0020540:CDS 25.0%
!! AATATGATTTGGAATGAGAT+TGG - chr1_1:35564166-35564185 Msa0020540:intron 25.0%
!! CTCTCTTATTTGAATTAGTA+CGG - chr1_1:35564293-35564312 Msa0020540:CDS 25.0%
!! TCTCTTATTTGAATTAGTAC+GGG - chr1_1:35564294-35564313 Msa0020540:CDS 25.0%
! CATCAACAATTTATTGACAT+AGG + chr1_1:35564335-35564354 None:intergenic 25.0%
! TTACAAGACATCATTGATAT+TGG - chr1_1:35564542-35564561 Msa0020540:intron 25.0%
! TACAAGACATCATTGATATT+GGG - chr1_1:35564543-35564562 Msa0020540:intron 25.0%
! ATTCTCGATAGTTTAATTAC+TGG - chr1_1:35564686-35564705 Msa0020540:CDS 25.0%
!!! ATAGTTTAATTACTGGCTTT+TGG - chr1_1:35564693-35564712 Msa0020540:CDS 25.0%
!! AATATAGACCAATTGATTCA+TGG + chr1_1:35564939-35564958 None:intergenic 25.0%
! AATGTTTGAAAAAGCAGAAA+AGG - chr1_1:35565250-35565269 Msa0020540:intron 25.0%
!!! TCAAAGCTTTGTAGAAATTT+TGG - chr1_1:35565332-35565351 Msa0020540:intron 25.0%
!!! ATAGTTCATTTTTATGAAGG+AGG + chr1_1:35565392-35565411 None:intergenic 25.0%
! CTTTATATATGATGCTTTCA+CGG - chr1_1:35565598-35565617 Msa0020540:intron 25.0%
! TATAAGGCATAGATAAACTA+GGG + chr1_1:35565792-35565811 None:intergenic 25.0%
! TTATAAGGCATAGATAAACT+AGG + chr1_1:35565793-35565812 None:intergenic 25.0%
! AAGATACTTCTATATCTGTT+AGG - chr1_1:35565996-35566015 Msa0020540:CDS 25.0%
!! AAAGCACTACAAAATTGAAA+GGG + chr1_1:35566107-35566126 None:intergenic 25.0%
!! TAAAGCACTACAAAATTGAA+AGG + chr1_1:35566108-35566127 None:intergenic 25.0%
! TTATAAGGAAAAACCTTTCT+TGG + chr1_1:35566249-35566268 None:intergenic 25.0%
!! TTGCGATATTACATTTTTCA+AGG - chr1_1:35566301-35566320 Msa0020540:intron 25.0%
!!! GATATTACATTTTTCAAGGT+AGG - chr1_1:35566305-35566324 Msa0020540:intron 25.0%
! TCAGGAAGCAAATTATATAT+TGG + chr1_1:35566372-35566391 None:intergenic 25.0%
! TTTAATTGCTTCCATTAAGA+AGG - chr1_1:35566455-35566474 Msa0020540:intron 25.0%
! ATGAGCAGTTGTTATAAATA+AGG + chr1_1:35566670-35566689 None:intergenic 25.0%
! ATATAAAAAATGCACTCAAG+GGG + chr1_1:35567254-35567273 None:intergenic 25.0%
! GATATAAAAAATGCACTCAA+GGG + chr1_1:35567255-35567274 None:intergenic 25.0%
! GATATAATATATTTGAGGGT+AGG - chr1_1:35567397-35567416 Msa0020540:CDS 25.0%
! TGATAGGAAGCTAATATTTA+TGG + chr1_1:35567819-35567838 None:intergenic 25.0%
! AATAATGTTCAAAAGTAGCT+TGG + chr1_1:35567876-35567895 None:intergenic 25.0%
! TTAATAACGAGTTATCATGT+AGG + chr1_1:35568059-35568078 None:intergenic 25.0%
! ACATGATAACTCGTTATTAA+TGG - chr1_1:35568059-35568078 Msa0020540:CDS 25.0%
! ATTTGTCAATACATTCTTGA+TGG + chr1_1:35568098-35568117 None:intergenic 25.0%
! ATTAAAACAACCAATGTGAA+AGG - chr1_1:35568586-35568605 Msa0020540:intron 25.0%
!! TGTATTATATTTTTCCCCAT+CGG - chr1_1:35570001-35570020 Msa0020540:CDS 25.0%
!! ACACTTTCATTTCTTTTTCT+TGG + chr1_1:35570055-35570074 None:intergenic 25.0%
AATTCAAATGAAAGTGGAAG+TGG + chr1_1:35560563-35560582 None:intergenic 30.0%
CTACGAAATTCAAATGAAAG+TGG + chr1_1:35560569-35560588 None:intergenic 30.0%
!! TAATGTTGATTCGCTTTCAA+GGG - chr1_1:35560966-35560985 Msa0020540:intron 30.0%
! TCAATTTTGTATACTTGTGG+AGG - chr1_1:35561319-35561338 Msa0020540:intron 30.0%
TTAAATGCGTTTGACATTAC+TGG - chr1_1:35561489-35561508 Msa0020540:intron 30.0%
!!! GTCTAGTTTTACTTCTAATG+GGG - chr1_1:35561517-35561536 Msa0020540:intron 30.0%
! TCCATCTGAATACTTCTTTT+CGG + chr1_1:35562360-35562379 None:intergenic 30.0%
! GCTAGTATCAAAAGCTTTTA+AGG - chr1_1:35562592-35562611 Msa0020540:intron 30.0%
GAGATTCTCTAAATGTATAG+AGG - chr1_1:35563180-35563199 Msa0020540:intron 30.0%
ATACAATTCTCTTGTTGATG+AGG - chr1_1:35563260-35563279 Msa0020540:intron 30.0%
GTTCTTTCTATTGTCTAACA+AGG - chr1_1:35563350-35563369 Msa0020540:intron 30.0%
TTGTCTAACAAGGATATTCA+AGG - chr1_1:35563360-35563379 Msa0020540:intron 30.0%
!! TAAATCAATCTTTGAAGCAG+TGG - chr1_1:35563574-35563593 Msa0020540:CDS 30.0%
ATACATAAGGAAAAACCCAA+TGG - chr1_1:35563616-35563635 Msa0020540:CDS 30.0%
!! TTAGGAATCTGACTGTTTTT+AGG - chr1_1:35563848-35563867 Msa0020540:CDS 30.0%
ATTTGGCATTTGACATAACT+AGG + chr1_1:35564009-35564028 None:intergenic 30.0%
TAAACATAAAACGTGTACGT+TGG - chr1_1:35564236-35564255 Msa0020540:intron 30.0%
AAACATAAAACGTGTACGTT+GGG - chr1_1:35564237-35564256 Msa0020540:intron 30.0%
TGATGTCATCATATTGAGTT+TGG - chr1_1:35564350-35564369 Msa0020540:intron 30.0%
!!! TTGAGTTTGGTTTTCATCAT+TGG - chr1_1:35564363-35564382 Msa0020540:intron 30.0%
! GATTTCTTTTGCTTCAATGT+TGG - chr1_1:35564434-35564453 Msa0020540:intron 30.0%
ATCCTTATAAACAGAACTGA+GGG + chr1_1:35564822-35564841 None:intergenic 30.0%
AATCCTTATAAACAGAACTG+AGG + chr1_1:35564823-35564842 None:intergenic 30.0%
AGTTCTGTTTATAAGGATTG+TGG - chr1_1:35564824-35564843 Msa0020540:CDS 30.0%
TTGGCTTATTAATGTGTTGT+AGG - chr1_1:35565169-35565188 Msa0020540:intron 30.0%
AATGATATAAATGCCGAGTT+AGG - chr1_1:35565194-35565213 Msa0020540:intron 30.0%
! TCTACAAAGCTTTGACAAAA+AGG + chr1_1:35565327-35565346 None:intergenic 30.0%
!! TCATTTTTATGAAGGAGGAA+TGG + chr1_1:35565387-35565406 None:intergenic 30.0%
GTATAATGAGTGACTGTATA+TGG - chr1_1:35565465-35565484 Msa0020540:CDS 30.0%
ACCATCACTTACATTTGAAA+TGG - chr1_1:35565490-35565509 Msa0020540:CDS 30.0%
! CCATCACTTACATTTGAAAT+GGG - chr1_1:35565491-35565510 Msa0020540:CDS 30.0%
TAAACTAGGGAGAGAAATTT+AGG + chr1_1:35565779-35565798 None:intergenic 30.0%
!! ATATAGAAGTATCTTGTAGG+CGG + chr1_1:35565991-35566010 None:intergenic 30.0%
!! CAGATATAGAAGTATCTTGT+AGG + chr1_1:35565994-35566013 None:intergenic 30.0%
TATATCTGTTAGGAAGAATG+CGG - chr1_1:35566006-35566025 Msa0020540:CDS 30.0%
CATACTAAATGACATGATGA+AGG - chr1_1:35566048-35566067 Msa0020540:CDS 30.0%
! GAAAGGGTACATTAATGAAA+TGG - chr1_1:35566157-35566176 Msa0020540:CDS 30.0%
AGATGAGAGAATTTCAAATC+TGG - chr1_1:35566199-35566218 Msa0020540:CDS 30.0%
TTTCTTGAACTTTCCAAGAA+AGG - chr1_1:35566233-35566252 Msa0020540:CDS 30.0%
!!! TTACATTTTTCAAGGTAGGA+AGG - chr1_1:35566309-35566328 Msa0020540:intron 30.0%
!! GATAATTTGCTAAGTATGTC+AGG + chr1_1:35566390-35566409 None:intergenic 30.0%
! TCTAGTTTCTTAAGTACTAC+AGG - chr1_1:35566534-35566553 Msa0020540:intron 30.0%
TCAGCTATCATTTACTGAAA+AGG - chr1_1:35566758-35566777 Msa0020540:intron 30.0%
CAGCTATCATTTACTGAAAA+GGG - chr1_1:35566759-35566778 Msa0020540:intron 30.0%
AGCTATCATTTACTGAAAAG+GGG - chr1_1:35566760-35566779 Msa0020540:intron 30.0%
GGAACTTAAAACTTACATTG+AGG - chr1_1:35566987-35567006 Msa0020540:CDS 30.0%
!! AATCTTCTGTTGATGGATTT+GGG + chr1_1:35567079-35567098 None:intergenic 30.0%
GAAAGCAGAAACTATAAAAC+CGG + chr1_1:35567195-35567214 None:intergenic 30.0%
CGATATAAAAAATGCACTCA+AGG + chr1_1:35567256-35567275 None:intergenic 30.0%
! TTTATGCTTTTCACTTCTGT+TGG - chr1_1:35567326-35567345 Msa0020540:intron 30.0%
! TTTTACAAACCAACGGAAAA+CGG - chr1_1:35567472-35567491 Msa0020540:CDS 30.0%
ATCCTTTGATAGGAAGTTAA+GGG + chr1_1:35567684-35567703 None:intergenic 30.0%
AATCCTTTGATAGGAAGTTA+AGG + chr1_1:35567685-35567704 None:intergenic 30.0%
!! AGTATAAACAGCAAGTTGAT+AGG + chr1_1:35567835-35567854 None:intergenic 30.0%
TATACCTTCTTTCAGAATTG+TGG - chr1_1:35567905-35567924 Msa0020540:CDS 30.0%
! AATACCACAATTCTGAAAGA+AGG + chr1_1:35567912-35567931 None:intergenic 30.0%
!!! ACTTGCACACATTTTTAAGT+AGG + chr1_1:35567970-35567989 None:intergenic 30.0%
! ATTGTTTCCAATGTCTTGTT+TGG + chr1_1:35568018-35568037 None:intergenic 30.0%
TGATAACTCGTTATTAATGG+TGG - chr1_1:35568062-35568081 Msa0020540:CDS 30.0%
TTGATAAATTGTGAGTGGAT+TGG + chr1_1:35568122-35568141 None:intergenic 30.0%
! AATATGCTACATGATTTTGC+TGG - chr1_1:35568165-35568184 Msa0020540:CDS 30.0%
! TGATGTTGAGGGATTTTATT+TGG - chr1_1:35568218-35568237 Msa0020540:CDS 30.0%
!! TAATTGATACAAGCACTGAA+GGG - chr1_1:35568340-35568359 Msa0020540:CDS 30.0%
ATTGATTGAATCAGATCAAG+TGG - chr1_1:35568437-35568456 Msa0020540:CDS 30.0%
ATTGATTGAATCAGATCAAG+TGG - chr1_1:35568437-35568456 Msa0020540:CDS 30.0%
AGAGGTTAGAACTTTAAACA+CGG - chr1_1:35568715-35568734 Msa0020540:CDS 30.0%
AACATGATGCTGCTAATTAT+AGG - chr1_1:35568773-35568792 Msa0020540:intron 30.0%
!!! CACATTGGTTTTTTTAACTC+TGG + chr1_1:35568810-35568829 None:intergenic 30.0%
ACCAATGTGAAAGATGAAAA+TGG - chr1_1:35568821-35568840 Msa0020540:intron 30.0%
! ACCATTTTCATCTTTCACAT+TGG + chr1_1:35568825-35568844 None:intergenic 30.0%
!! GCATCTTTGATTTGCAATAT+TGG - chr1_1:35568920-35568939 Msa0020540:intron 30.0%
TAACTTTCTGATCTTGCATT+GGG - chr1_1:35568947-35568966 Msa0020540:intron 30.0%
! TTTTCATGTTACGCTTTATC+AGG + chr1_1:35569033-35569052 None:intergenic 30.0%
! TTGTCGTTTGTTTGCATATT+TGG - chr1_1:35569369-35569388 Msa0020540:intron 30.0%
ATGTTGCTGATATACTTACA+AGG - chr1_1:35569600-35569619 Msa0020540:CDS 30.0%
!! AAGCTAATCTGTTTGATTTG+CGG - chr1_1:35569807-35569826 Msa0020540:CDS 30.0%
!!! TGTTTGATTTGCGGTTTTTA+TGG - chr1_1:35569816-35569835 Msa0020540:CDS 30.0%
! ATCTAGACTACTTAAGTTGT+AGG + chr1_1:35569855-35569874 None:intergenic 30.0%
ACAACTTAAGTAGTCTAGAT+TGG - chr1_1:35569855-35569874 Msa0020540:CDS 30.0%
ACATCAAAACACAATTACAC+AGG + chr1_1:35570114-35570133 None:intergenic 30.0%
GAATTTCGTAGTTAACCCAA+CGG - chr1_1:35560578-35560597 Msa0020540:three_prime_UTR 35.0%
! TTTGACGAATTCTTCGAGTT+GGG + chr1_1:35560785-35560804 None:intergenic 35.0%
CTTGAAAGCGAATCAACATT+AGG + chr1_1:35560967-35560986 None:intergenic 35.0%
!! CTAATGTTGATTCGCTTTCA+AGG - chr1_1:35560965-35560984 Msa0020540:intron 35.0%
TAACGAACCAAACATACCTT+AGG + chr1_1:35561117-35561136 None:intergenic 35.0%
CAAGTAGAATCAATTGTGGA+AGG + chr1_1:35561593-35561612 None:intergenic 35.0%
GCTTCAAGTAGAATCAATTG+TGG + chr1_1:35561597-35561616 None:intergenic 35.0%
CTACTTGAAGCTAGAAATTG+AGG - chr1_1:35561606-35561625 Msa0020540:intron 35.0%
ATAATCACTTTACCTTCGAC+TGG - chr1_1:35561705-35561724 Msa0020540:intron 35.0%
TTCAAACACATTGTTTCGAC+AGG - chr1_1:35561801-35561820 Msa0020540:intron 35.0%
ACCATGCTTCAAACTAAATG+GGG + chr1_1:35561892-35561911 None:intergenic 35.0%
CACCATGCTTCAAACTAAAT+GGG + chr1_1:35561893-35561912 None:intergenic 35.0%
ACACCATGCTTCAAACTAAA+TGG + chr1_1:35561894-35561913 None:intergenic 35.0%
GAATGCATTTCTACAACAAG+TGG + chr1_1:35562159-35562178 None:intergenic 35.0%
CTTGTGAATAAGATGCATGA+TGG + chr1_1:35562294-35562313 None:intergenic 35.0%
ACTTCCATTGTTAGGGAAAT+TGG - chr1_1:35562389-35562408 Msa0020540:intron 35.0%
!! TACTATTGGTGCTGAAAATG+TGG - chr1_1:35562442-35562461 Msa0020540:intron 35.0%
!! ACTATTGGTGCTGAAAATGT+GGG - chr1_1:35562443-35562462 Msa0020540:intron 35.0%
! GTGGAGAGTCTTATAAGATT+AGG - chr1_1:35562543-35562562 Msa0020540:intron 35.0%
TGACAATGAAAACTCTAACG+TGG - chr1_1:35562973-35562992 Msa0020540:intron 35.0%
AATGAAAACTCTAACGTGGA+TGG - chr1_1:35562977-35562996 Msa0020540:intron 35.0%
!!! GAATTTTGAAGCTGTTGAGA+AGG - chr1_1:35563015-35563034 Msa0020540:intron 35.0%
TATCACTACCATTCTGCATA+GGG + chr1_1:35563093-35563112 None:intergenic 35.0%
TTATGTAGTCGTTGCTTCAA+TGG - chr1_1:35563384-35563403 Msa0020540:intron 35.0%
! CACAGTATGTTTTCATGCAT+CGG - chr1_1:35563748-35563767 Msa0020540:intron 35.0%
ACAGTCAGATTCCTAATTCT+AGG + chr1_1:35563844-35563863 None:intergenic 35.0%
! CTCAGTGCATTTATCTTTTC+AGG + chr1_1:35563874-35563893 None:intergenic 35.0%
CTGAAAAGATAAATGCACTG+AGG - chr1_1:35563872-35563891 Msa0020540:CDS 35.0%
ATGCCAAATGTCAATCCATA+CGG - chr1_1:35564020-35564039 Msa0020540:intron 35.0%
! TTACCGTATGGATTGACATT+TGG + chr1_1:35564026-35564045 None:intergenic 35.0%
TATCGCAGATATCAGCTTTA+TGG - chr1_1:35564411-35564430 Msa0020540:intron 35.0%
! ATCGCAGATATCAGCTTTAT+GGG - chr1_1:35564412-35564431 Msa0020540:intron 35.0%
! TTCTTTTGCTTCAATGTTGG+TGG - chr1_1:35564437-35564456 Msa0020540:intron 35.0%
! ATGTCTTTTCAACCATGCAA+AGG + chr1_1:35564499-35564518 None:intergenic 35.0%
ATGGTTGAAAAGACATCAAC+TGG - chr1_1:35564503-35564522 Msa0020540:CDS 35.0%
GACATCATTGATATTGGGTT+TGG - chr1_1:35564548-35564567 Msa0020540:intron 35.0%
! GTCTAAAGTTGATCCTTTAC+TGG - chr1_1:35564577-35564596 Msa0020540:intron 35.0%
AGATGACAAGGCAAAATTGT+TGG - chr1_1:35564637-35564656 Msa0020540:intron 35.0%
! TTTGGCTTCCAGCAAATATT+TGG - chr1_1:35564711-35564730 Msa0020540:CDS 35.0%
ATCCCTCAGTTCTGTTTATA+AGG - chr1_1:35564817-35564836 Msa0020540:CDS 35.0%
TCTGTTTATAAGGATTGTGG+TGG - chr1_1:35564827-35564846 Msa0020540:CDS 35.0%
TCATACAGCCATGAATCAAT+TGG - chr1_1:35564928-35564947 Msa0020540:intron 35.0%
GAAACTTGCAAAAGAGAGAA+AGG - chr1_1:35564988-35565007 Msa0020540:CDS 35.0%
GCAGAAAAGGAAATTGTTTC+TGG - chr1_1:35565263-35565282 Msa0020540:intron 35.0%
!! GAAAAGGAAATTGTTTCTGG+CGG - chr1_1:35565266-35565285 Msa0020540:intron 35.0%
TCAAAGGACAAGAATTTGGT+TGG - chr1_1:35565290-35565309 Msa0020540:intron 35.0%
! AAATTTTGGACTACTGCAGA+AGG - chr1_1:35565346-35565365 Msa0020540:intron 35.0%
! GTACTGATCTGTTCATGATT+TGG - chr1_1:35565422-35565441 Msa0020540:CDS 35.0%
CCCATTTCAAATGTAAGTGA+TGG + chr1_1:35565494-35565513 None:intergenic 35.0%
!! AGTTCTGGATACTGAAGAAA+TGG + chr1_1:35565669-35565688 None:intergenic 35.0%
! GGAGAGAAATTTAGGATAAG+AGG + chr1_1:35565771-35565790 None:intergenic 35.0%
GTGCAATAGTGCAATTAGAA+CGG + chr1_1:35565907-35565926 None:intergenic 35.0%
TCTAATTGCACTATTGCACT+AGG - chr1_1:35565908-35565927 Msa0020540:CDS 35.0%
!!! TTCCCAATCTTTTAGAACCA+TGG - chr1_1:35565948-35565967 Msa0020540:CDS 35.0%
!! GTCCATGGTTCTAAAAGATT+GGG + chr1_1:35565953-35565972 None:intergenic 35.0%
!! AGTCCATGGTTCTAAAAGAT+TGG + chr1_1:35565954-35565973 None:intergenic 35.0%
!!! GCATACATTTTTTCAGTCCA+TGG + chr1_1:35565968-35565987 None:intergenic 35.0%
!! TATAGAAGTATCTTGTAGGC+GGG + chr1_1:35565990-35566009 None:intergenic 35.0%
TCATTTCTCTATCAGGTGAA+AGG - chr1_1:35566140-35566159 Msa0020540:CDS 35.0%
CATTTCTCTATCAGGTGAAA+GGG - chr1_1:35566141-35566160 Msa0020540:CDS 35.0%
!! GAAGGTATTTAATAGTCTCC+TGG - chr1_1:35566327-35566346 Msa0020540:intron 35.0%
TGGTGGAAAAGCTATGTAAT+CGG - chr1_1:35566575-35566594 Msa0020540:intron 35.0%
! AAGCTATGTAATCGGTTTAG+TGG - chr1_1:35566583-35566602 Msa0020540:intron 35.0%
GGCAAAGAAGTTTGCAAAAT+TGG - chr1_1:35566966-35566985 Msa0020540:CDS 35.0%
TAAGCTGAATAAGTTCCACA+TGG - chr1_1:35567020-35567039 Msa0020540:CDS 35.0%
TAAGTTCCACATGGAAAAGA+AGG - chr1_1:35567029-35567048 Msa0020540:CDS 35.0%
!! CAATCTTCTGTTGATGGATT+TGG + chr1_1:35567080-35567099 None:intergenic 35.0%
ATTAGACTTCGAGTGATCTT+CGG + chr1_1:35567136-35567155 None:intergenic 35.0%
TCGAAGTCTAATACATCTTC+AGG - chr1_1:35567144-35567163 Msa0020540:intron 35.0%
! CAGAAGTGAAAAGCATAAAC+AGG + chr1_1:35567325-35567344 None:intergenic 35.0%
TATATTTGAGGGTAGGTTTG+TGG - chr1_1:35567404-35567423 Msa0020540:CDS 35.0%
!!! ATGCTGCTTTTACAAACCAA+CGG - chr1_1:35567465-35567484 Msa0020540:CDS 35.0%
! AAATGATAACCGTTTTCCGT+TGG + chr1_1:35567484-35567503 None:intergenic 35.0%
AGATTCTATCTCAAGTACTC+TGG + chr1_1:35567509-35567528 None:intergenic 35.0%
GTACTTGAGATAGAATCTAC+TGG - chr1_1:35567511-35567530 Msa0020540:CDS 35.0%
AACCCCATTTCATCATTCTT+TGG + chr1_1:35567546-35567565 None:intergenic 35.0%
CTCTGAATCTACTTGATTGA+AGG + chr1_1:35567577-35567596 None:intergenic 35.0%
GTAGATTCAGAGACTAAGAA+CGG - chr1_1:35567585-35567604 Msa0020540:CDS 35.0%
! ACTCAGTCTTGTAAGTAGTA+AGG + chr1_1:35567636-35567655 None:intergenic 35.0%
TCCTTTGATAGGAAGTTAAG+GGG + chr1_1:35567683-35567702 None:intergenic 35.0%
CCTCTTTGATAAATTGTGAG+TGG + chr1_1:35568127-35568146 None:intergenic 35.0%
CCACTCACAATTTATCAAAG+AGG - chr1_1:35568124-35568143 Msa0020540:CDS 35.0%
GGTCATGTAGTTTCTCAATT+TGG - chr1_1:35568239-35568258 Msa0020540:CDS 35.0%
! TTTTCTGCAGATGAAGTAGA+TGG - chr1_1:35568312-35568331 Msa0020540:CDS 35.0%
!! GTAATTGATACAAGCACTGA+AGG - chr1_1:35568339-35568358 Msa0020540:CDS 35.0%
TAACCTGTTGTCTTAACCAT+GGG + chr1_1:35568480-35568499 None:intergenic 35.0%
AACATGATGCTGCCAATTAT+AGG - chr1_1:35568547-35568566 Msa0020540:intron 35.0%
!!! CACATTGGTTGTTTTAATCC+TGG + chr1_1:35568584-35568603 None:intergenic 35.0%
ACCAATGTGAAAGGTGAAAA+AGG - chr1_1:35568595-35568614 Msa0020540:intron 35.0%
!! ACCTTTTTCACCTTTCACAT+TGG + chr1_1:35568599-35568618 None:intergenic 35.0%
CAAAACACTAGAAGATGCTT+TGG + chr1_1:35568635-35568654 None:intergenic 35.0%
TAACCTCTTGTCTTAACCAT+GGG + chr1_1:35568703-35568722 None:intergenic 35.0%
GAGGTTAGAACTTTAAACAC+GGG - chr1_1:35568716-35568735 Msa0020540:CDS 35.0%
TGCTAATTATAGGAGCTCAA+CGG - chr1_1:35568783-35568802 Msa0020540:intron 35.0%
CTAACTTTCTGATCTTGCAT+TGG - chr1_1:35568946-35568965 Msa0020540:intron 35.0%
CAACTTTCTGATCTTGCATT+GGG - chr1_1:35569093-35569112 Msa0020540:intron 35.0%
CAACTTTCTGATCTTGCATT+GGG - chr1_1:35569093-35569112 Msa0020540:intron 35.0%
GATTTCTGATAAAGCGTAAC+AGG - chr1_1:35569308-35569327 Msa0020540:intron 35.0%
GAACCAAGTTAATGTTCTTC+TGG - chr1_1:35569397-35569416 Msa0020540:intron 35.0%
GATCCAGAAGAACATTAACT+TGG + chr1_1:35569403-35569422 None:intergenic 35.0%
ATAGTTAGAGAAGCAGATTC+TGG - chr1_1:35569464-35569483 Msa0020540:intron 35.0%
!!! CAGATTAGCTTTTCATCCAA+AGG + chr1_1:35569798-35569817 None:intergenic 35.0%
GGATACAACATGTTTAACAG+TGG - chr1_1:35569930-35569949 Msa0020540:CDS 35.0%
TCCAATTGAATATCTCCGAT+GGG + chr1_1:35570019-35570038 None:intergenic 35.0%
TTCCAATTGAATATCTCCGA+TGG + chr1_1:35570020-35570039 None:intergenic 35.0%
! ATGGTTGTTGTTGTCGTCTT+CGG + chr1_1:35560719-35560738 None:intergenic 40.0%
!!! GATGTTTGTAGGGTTTTGGA+CGG + chr1_1:35560746-35560765 None:intergenic 40.0%
! AGGAGATGTTTGTAGGGTTT+TGG + chr1_1:35560750-35560769 None:intergenic 40.0%
CTTTGACGAATTCTTCGAGT+TGG + chr1_1:35560786-35560805 None:intergenic 40.0%
CAACTCGAAGAATTCGTCAA+AGG - chr1_1:35560784-35560803 Msa0020540:three_prime_UTR 40.0%
ATTCGACCGTGTTTACTCTT+TGG - chr1_1:35560861-35560880 Msa0020540:three_prime_UTR 40.0%
TAGAACGGAGACTTTCAACA+AGG + chr1_1:35560927-35560946 None:intergenic 40.0%
GAAGAACAGCGAGATTAGAA+CGG + chr1_1:35560942-35560961 None:intergenic 40.0%
CATTACGATGAGAAGCAACA+CGG + chr1_1:35561032-35561051 None:intergenic 40.0%
CAATGCTCCTAAGGTATGTT+TGG - chr1_1:35561107-35561126 Msa0020540:intron 40.0%
TATAGCTAAAAGCCAGTCGA+AGG + chr1_1:35561720-35561739 None:intergenic 40.0%
!! TCCCCATTTAGTTTGAAGCA+TGG - chr1_1:35561888-35561907 Msa0020540:CDS 40.0%
! GTTTGAAGCATGGTGTATTG+CGG - chr1_1:35561898-35561917 Msa0020540:CDS 40.0%
! TTGTTTCTTCCTGCTACTTG+CGG + chr1_1:35561937-35561956 None:intergenic 40.0%
GAATCTCATTGCAAGCTCAT+TGG - chr1_1:35562001-35562020 Msa0020540:CDS 40.0%
AAGACAAGTAACCTTCGTCA+GGG + chr1_1:35562061-35562080 None:intergenic 40.0%
AAAGACAAGTAACCTTCGTC+AGG + chr1_1:35562062-35562081 None:intergenic 40.0%
GTTGGAATCTTTCAAAAGCG+CGG + chr1_1:35562198-35562217 None:intergenic 40.0%
TGTCGTGTAATGGTACTTTG+TGG + chr1_1:35562258-35562277 None:intergenic 40.0%
!! TGATTTTGTTGTCGTCCACA+TGG - chr1_1:35562316-35562335 Msa0020540:CDS 40.0%
!! GCCGAAAAGAAGTATTCAGA+TGG - chr1_1:35562356-35562375 Msa0020540:CDS 40.0%
CCTTGCAACTTCCATTGTTA+GGG - chr1_1:35562382-35562401 Msa0020540:intron 40.0%
CCTTCCAATTTCCCTAACAA+TGG + chr1_1:35562396-35562415 None:intergenic 40.0%
CCATTGTTAGGGAAATTGGA+AGG - chr1_1:35562393-35562412 Msa0020540:intron 40.0%
!! CTATTGGTGCTGAAAATGTG+GGG - chr1_1:35562444-35562463 Msa0020540:intron 40.0%
ATTCTTGTTCCTCACTTTGG+TGG - chr1_1:35562524-35562543 Msa0020540:intron 40.0%
AAGCGAGTACGAAGAACATT+CGG - chr1_1:35562627-35562646 Msa0020540:intron 40.0%
ACGCACTAAACAAGCTATGT+TGG - chr1_1:35562652-35562671 Msa0020540:intron 40.0%
!! ACTCAGTTTCGATTGGTTTG+TGG - chr1_1:35562759-35562778 Msa0020540:intron 40.0%
ATGTTGCAGCATAACCCATT+TGG - chr1_1:35562866-35562885 Msa0020540:intron 40.0%
TTGCCTCAAATGAAGCTACT+CGG + chr1_1:35562901-35562920 None:intergenic 40.0%
! AGCTTCATTTGAGGCAACTT+TGG - chr1_1:35562904-35562923 Msa0020540:intron 40.0%
AGGCAACTTTGGATCAGTAT+AGG - chr1_1:35562915-35562934 Msa0020540:intron 40.0%
TCATTGTCAGAACCTTCTGA+AGG + chr1_1:35562962-35562981 None:intergenic 40.0%
GACTGATACATTCATGTCAC+AGG - chr1_1:35563054-35563073 Msa0020540:intron 40.0%
CTATCACTACCATTCTGCAT+AGG + chr1_1:35563094-35563113 None:intergenic 40.0%
ATAGTAGTGTGCCTGATGTT+GGG - chr1_1:35563110-35563129 Msa0020540:intron 40.0%
CAGAAGATGATGCCATCAAT+TGG + chr1_1:35563225-35563244 None:intergenic 40.0%
! CTTCAATGGACAAGTTGGAA+TGG - chr1_1:35563398-35563417 Msa0020540:intron 40.0%
CTTAAACAGACAGGGTTACA+TGG + chr1_1:35563435-35563454 None:intergenic 40.0%
!! TCCATCGACTTAAACAGACA+GGG + chr1_1:35563443-35563462 None:intergenic 40.0%
!! ATCCATCGACTTAAACAGAC+AGG + chr1_1:35563444-35563463 None:intergenic 40.0%
! TTCTTTCTGGCATTTGCTCT+CGG - chr1_1:35563531-35563550 Msa0020540:intron 40.0%
GATTCTTGGCAGTTTCCATT+GGG + chr1_1:35563634-35563653 None:intergenic 40.0%
AGATTCTTGGCAGTTTCCAT+TGG + chr1_1:35563635-35563654 None:intergenic 40.0%
TGCAAGACTCAAGAGATTCT+TGG + chr1_1:35563648-35563667 None:intergenic 40.0%
GCAGCTCTTGAGTTTATAGT+TGG - chr1_1:35563692-35563711 Msa0020540:CDS 40.0%
TGAGTTTATAGTTGGCACAC+TGG - chr1_1:35563700-35563719 Msa0020540:CDS 40.0%
TGCATGAAAACATACTGTGC+TGG + chr1_1:35563747-35563766 None:intergenic 40.0%
! CACTGAACTGTTTTACCGTA+TGG + chr1_1:35564038-35564057 None:intergenic 40.0%
CATACGGTAAAACAGTTCAG+TGG - chr1_1:35564036-35564055 Msa0020540:intron 40.0%
AGGACTCAGATTGTTTATGC+TGG - chr1_1:35564264-35564283 Msa0020540:CDS 40.0%
CAGATTGTTTATGCTGGCAA+TGG - chr1_1:35564270-35564289 Msa0020540:CDS 40.0%
AAAGCTGATATCTGCGATAG+TGG + chr1_1:35564410-35564429 None:intergenic 40.0%
! AAAGGACAGATAAAGCACCA+CGG + chr1_1:35564481-35564500 None:intergenic 40.0%
TGCTTTATCTGTCCTTTGCA+TGG - chr1_1:35564484-35564503 Msa0020540:CDS 40.0%
! TTGATATTGGGTTTGGTCGT+TGG - chr1_1:35564555-35564574 Msa0020540:intron 40.0%
! AAGTTGATCCTTTACTGGCA+AGG - chr1_1:35564582-35564601 Msa0020540:intron 40.0%
GCTGCATACCAAATATTTGC+TGG + chr1_1:35564722-35564741 None:intergenic 40.0%
AGTAGGGTGAACAGCATAAA+TGG + chr1_1:35564765-35564784 None:intergenic 40.0%
!! CTGCTATGATTTCTGGAGTA+GGG + chr1_1:35564781-35564800 None:intergenic 40.0%
ATGTCAGCTGCTATGATTTC+TGG + chr1_1:35564788-35564807 None:intergenic 40.0%
TTTGCGACTTGAACTGTGAT+TGG + chr1_1:35564881-35564900 None:intergenic 40.0%
AAGAGAGAAAGGACATTGAG+AGG - chr1_1:35564999-35565018 Msa0020540:CDS 40.0%
!! AATTGTTTCTGGCGGTTCAA+AGG - chr1_1:35565274-35565293 Msa0020540:intron 40.0%
CGGTTCAAAGGACAAGAATT+TGG - chr1_1:35565286-35565305 Msa0020540:intron 40.0%
TCTTCAGTATCCAGAACTAC+AGG - chr1_1:35565671-35565690 Msa0020540:CDS 40.0%
! TGGTCATTGATGCAGACTTT+TGG - chr1_1:35565724-35565743 Msa0020540:CDS 40.0%
CACTAGGAGATTTAGCAGTA+AGG - chr1_1:35565924-35565943 Msa0020540:CDS 40.0%
TGATGCGTCATTTCTCTATC+AGG - chr1_1:35566133-35566152 Msa0020540:CDS 40.0%
TTGTTTCCTGTTGTAATGCC+AGG + chr1_1:35566348-35566367 None:intergenic 40.0%
TGCAGAAAGATTCATTGCTC+AGG + chr1_1:35566422-35566441 None:intergenic 40.0%
AGTACTACAGGACAGACAAA+TGG - chr1_1:35566546-35566565 Msa0020540:intron 40.0%
CATAACAGAATCCTCTGACA+AGG + chr1_1:35566826-35566845 None:intergenic 40.0%
CTTGTCAGAGGATTCTGTTA+TGG - chr1_1:35566824-35566843 Msa0020540:intron 40.0%
TGCTGTCAATCTTCTGTTGA+TGG + chr1_1:35567086-35567105 None:intergenic 40.0%
ATCAACAGAAGATTGACAGC+AGG - chr1_1:35567085-35567104 Msa0020540:CDS 40.0%
TCAACAGAAGATTGACAGCA+GGG - chr1_1:35567086-35567105 Msa0020540:CDS 40.0%
AAAAAATGCACTCAAGGGGA+AGG + chr1_1:35567250-35567269 None:intergenic 40.0%
! AGGGTAGGTTTGTGGTATTT+TGG - chr1_1:35567412-35567431 Msa0020540:CDS 40.0%
GATAGAATCTACTGGTACGA+CGG - chr1_1:35567519-35567538 Msa0020540:CDS 40.0%
ATAGAATCTACTGGTACGAC+GGG - chr1_1:35567520-35567539 Msa0020540:CDS 40.0%
GGGCCAAAGAATGATGAAAT+GGG - chr1_1:35567540-35567559 Msa0020540:CDS 40.0%
GGCCAAAGAATGATGAAATG+GGG - chr1_1:35567541-35567560 Msa0020540:CDS 40.0%
TCCCCTTAACTTCCTATCAA+AGG - chr1_1:35567679-35567698 Msa0020540:CDS 40.0%
! TTTATGGAAGTGTGTGTCGA+GGG + chr1_1:35567803-35567822 None:intergenic 40.0%
! ATTTATGGAAGTGTGTGTCG+AGG + chr1_1:35567804-35567823 None:intergenic 40.0%
CTAACCTGTTGTCTTAACCA+TGG + chr1_1:35568481-35568500 None:intergenic 40.0%
AAACACAGCTGTTGTGAATC+TGG - chr1_1:35568504-35568523 Msa0020540:CDS 40.0%
TGCCAATTATAGGAGCTCAA+CGG - chr1_1:35568557-35568576 Msa0020540:intron 40.0%
TATTGAAGTCCAATCACCCA+TGG - chr1_1:35568684-35568703 Msa0020540:CDS 40.0%
TTGTCTTAACCATGGGTGAT+TGG + chr1_1:35568696-35568715 None:intergenic 40.0%
CTAACCTCTTGTCTTAACCA+TGG + chr1_1:35568704-35568723 None:intergenic 40.0%
!! AAACACGGGTTTTGTGAATC+TGG - chr1_1:35568730-35568749 Msa0020540:CDS 40.0%
TCACCAAGAAAAGAGCTACT+CGG - chr1_1:35568855-35568874 Msa0020540:intron 40.0%
GCTTAAGCTTTCATTCAGAG+AGG + chr1_1:35568894-35568913 None:intergenic 40.0%
CCAATGCAAGATCAGAAAGT+TGG + chr1_1:35568949-35568968 None:intergenic 40.0%
CCAACTTTCTGATCTTGCAT+TGG - chr1_1:35569092-35569111 Msa0020540:intron 40.0%
CCAATGCAAGATCAGAAAGT+TGG + chr1_1:35568949-35568968 None:intergenic 40.0%
CCAACTTTCTGATCTTGCAT+TGG - chr1_1:35569092-35569111 Msa0020540:intron 40.0%
TATACTTCGTATCCTCATGC+AGG - chr1_1:35569758-35569777 Msa0020540:CDS 40.0%
TCAGTGTATTTACCTGCATG+AGG + chr1_1:35569773-35569792 None:intergenic 40.0%
GGTAAATACACTGACACCTT+TGG - chr1_1:35569779-35569798 Msa0020540:CDS 40.0%
!! GTCTAGATTGGAAGTATCCT+TGG - chr1_1:35569867-35569886 Msa0020540:CDS 40.0%
CCAATTGAATATCTCCGATG+GGG + chr1_1:35570018-35570037 None:intergenic 40.0%
! GGTTTTCTCTTCTGTTGCGT+TGG + chr1_1:35560626-35560645 None:intergenic 45.0%
GAAAACCTCTCTCTCTTCCA+TGG - chr1_1:35560639-35560658 Msa0020540:three_prime_UTR 45.0%
! TTGTTGTTGTCGTCTTCGGA+GGG + chr1_1:35560715-35560734 None:intergenic 45.0%
AGAGGGAGGAGATGTTTGTA+GGG + chr1_1:35560756-35560775 None:intergenic 45.0%
GATGCAGAGGATTTCTCTGT+CGG + chr1_1:35560827-35560846 None:intergenic 45.0%
AAACACGGTCGAATACGTCT+TGG + chr1_1:35560855-35560874 None:intergenic 45.0%
CGCGAACCAAAGAGTAAACA+CGG + chr1_1:35560870-35560889 None:intergenic 45.0%
! CGTGTTTACTCTTTGGTTCG+CGG - chr1_1:35560868-35560887 Msa0020540:three_prime_UTR 45.0%
AGATTCCAGCAATGCTCCTA+AGG - chr1_1:35561098-35561117 Msa0020540:intron 45.0%
!! ACATACCTTAGGAGCATTGC+TGG + chr1_1:35561106-35561125 None:intergenic 45.0%
TGTCAGCAGCGATTAAAGTC+TGG + chr1_1:35561273-35561292 None:intergenic 45.0%
AGAAACAACCCGTGCATTCA+TGG - chr1_1:35561949-35561968 Msa0020540:intron 45.0%
AACCCGTGCATTCATGGAAT+TGG - chr1_1:35561955-35561974 Msa0020540:intron 45.0%
ACCCGTGCATTCATGGAATT+GGG - chr1_1:35561956-35561975 Msa0020540:intron 45.0%
TCCCAATTCCATGAATGCAC+GGG + chr1_1:35561960-35561979 None:intergenic 45.0%
CTCCCAATTCCATGAATGCA+CGG + chr1_1:35561961-35561980 None:intergenic 45.0%
! AAGCGCGGCATTTTCAAACA+TGG + chr1_1:35562183-35562202 None:intergenic 45.0%
!!! ACAGAGGGCATCTTTTGAGT+TGG + chr1_1:35562216-35562235 None:intergenic 45.0%
GTAATGGTACTTTGTGGAGC+AGG + chr1_1:35562252-35562271 None:intergenic 45.0%
CACTAGACTGTGTCGTGTAA+TGG + chr1_1:35562268-35562287 None:intergenic 45.0%
GCCTTGCAACTTCCATTGTT+AGG - chr1_1:35562381-35562400 Msa0020540:intron 45.0%
CCCTAACAATGGAAGTTGCA+AGG + chr1_1:35562385-35562404 None:intergenic 45.0%
!! AAATGTGGGGCGTTTTCTTG+TGG - chr1_1:35562457-35562476 Msa0020540:intron 45.0%
GGCATTCTTGTTCCTCACTT+TGG - chr1_1:35562521-35562540 Msa0020540:intron 45.0%
TAAGACTCTCCACCAAAGTG+AGG + chr1_1:35562536-35562555 None:intergenic 45.0%
AATGCTCTTGTAGCTGTGCT+GGG - chr1_1:35562566-35562585 Msa0020540:intron 45.0%
! GGGATGTTTCTGCTTACACA+AGG - chr1_1:35562696-35562715 Msa0020540:intron 45.0%
GAGGAACACTCAGTTTCGAT+TGG - chr1_1:35562752-35562771 Msa0020540:intron 45.0%
!! TTCGATTGGTTTGTGGAACG+AGG - chr1_1:35562766-35562785 Msa0020540:intron 45.0%
AAAGAGCTTGAGCCTTCAGA+AGG - chr1_1:35562947-35562966 Msa0020540:intron 45.0%
AAACTCTAACGTGGATGGTG+AGG - chr1_1:35562982-35563001 Msa0020540:intron 45.0%
TTGAAGCTGTTGAGAAGGAG+CGG - chr1_1:35563020-35563039 Msa0020540:intron 45.0%
GATGCAATCCCTATGCAGAA+TGG - chr1_1:35563082-35563101 Msa0020540:intron 45.0%
GATAGTAGTGTGCCTGATGT+TGG - chr1_1:35563109-35563128 Msa0020540:intron 45.0%
GCCATCAATTGGACAAGTGT+CGG + chr1_1:35563214-35563233 None:intergenic 45.0%
TTACCAGGGGCAACATCTTT+CGG + chr1_1:35563324-35563343 None:intergenic 45.0%
AAAGAACTACGGCTTACCAG+GGG + chr1_1:35563337-35563356 None:intergenic 45.0%
GAAAGAACTACGGCTTACCA+GGG + chr1_1:35563338-35563357 None:intergenic 45.0%
AGAAAGAACTACGGCTTACC+AGG + chr1_1:35563339-35563358 None:intergenic 45.0%
CGTTGCTTCAATGGACAAGT+TGG - chr1_1:35563393-35563412 Msa0020540:intron 45.0%
ACCCTGTCTGTTTAAGTCGA+TGG - chr1_1:35563439-35563458 Msa0020540:intron 45.0%
! TCGGTTGTAGGCATTTTCTC+AGG - chr1_1:35563550-35563569 Msa0020540:CDS 45.0%
! CTTGCAACTGATTCCAACAC+AGG - chr1_1:35563662-35563681 Msa0020540:CDS 45.0%
AAACGTGTACGTTGGGAAGT+AGG - chr1_1:35564244-35564263 Msa0020540:CDS 45.0%
AAGACATCAACTGGTGTGCT+TGG - chr1_1:35564512-35564531 Msa0020540:CDS 45.0%
! GAGGCTTTCTGAAGATGACA+AGG - chr1_1:35564625-35564644 Msa0020540:intron 45.0%
!! GCTGCTATGATTTCTGGAGT+AGG + chr1_1:35564782-35564801 None:intergenic 45.0%
TGATTGCACCTTCTGTGTAC+CGG + chr1_1:35565056-35565075 None:intergenic 45.0%
AGAGGCTGCAAATCCTAACT+CGG + chr1_1:35565210-35565229 None:intergenic 45.0%
ATTGCAGAAGCCTGTAGTTC+TGG + chr1_1:35565684-35565703 None:intergenic 45.0%
!! GCTAGCTTTGTGTCGATTGA+TGG - chr1_1:35565704-35565723 Msa0020540:CDS 45.0%
TCAGCTTCTCTTCACAGTTG+TGG - chr1_1:35565859-35565878 Msa0020540:CDS 45.0%
TGTTAGGAAGAATGCGGTTC+TGG - chr1_1:35566012-35566031 Msa0020540:CDS 45.0%
TAGTCTCCTGGCATTACAAC+AGG - chr1_1:35566339-35566358 Msa0020540:intron 45.0%
TTCATTGCTCAGGTTCTGCT+TGG + chr1_1:35566412-35566431 None:intergenic 45.0%
!! AATCGGTTTAGTGGTGTCAC+AGG - chr1_1:35566592-35566611 Msa0020540:intron 45.0%
TCTCTACAGATGTCAGACAG+TGG - chr1_1:35566712-35566731 Msa0020540:intron 45.0%
CTCTACAGATGTCAGACAGT+GGG - chr1_1:35566713-35566732 Msa0020540:intron 45.0%
CTCTGACAAGGCATGTTCAT+AGG + chr1_1:35566814-35566833 None:intergenic 45.0%
CTATGAACATGCCTTGTCAG+AGG - chr1_1:35566812-35566831 Msa0020540:intron 45.0%
! CCTGTTCCTTCTTTTCCATG+TGG + chr1_1:35567038-35567057 None:intergenic 45.0%
CCACATGGAAAAGAAGGAAC+AGG - chr1_1:35567035-35567054 Msa0020540:CDS 45.0%
CGGGCCAAAGAATGATGAAA+TGG - chr1_1:35567539-35567558 Msa0020540:CDS 45.0%
! TTATGGAAGTGTGTGTCGAG+GGG + chr1_1:35567802-35567821 None:intergenic 45.0%
TGCTGCACCAAACAAGACAT+TGG - chr1_1:35568008-35568027 Msa0020540:CDS 45.0%
TATTGAAGTCCAGTCACCCA+TGG - chr1_1:35568461-35568480 Msa0020540:CDS 45.0%
TTGTCTTAACCATGGGTGAC+TGG + chr1_1:35568473-35568492 None:intergenic 45.0%
TCACCCATGGTTAAGACAAC+AGG - chr1_1:35568474-35568493 Msa0020540:CDS 45.0%
GACCGTTGAGCTCCTATAAT+TGG + chr1_1:35568562-35568581 None:intergenic 45.0%
TCACCCATGGTTAAGACAAG+AGG - chr1_1:35568697-35568716 Msa0020540:CDS 45.0%
! AGACCGAGTAGCTCTTTTCT+TGG + chr1_1:35568861-35568880 None:intergenic 45.0%
AGAAAAGAGCTACTCGGTCT+AGG - chr1_1:35568861-35568880 Msa0020540:intron 45.0%
CAATGTCAGGGTTTGGACTT+TGG - chr1_1:35569909-35569928 Msa0020540:CDS 45.0%
CCCCATCGGAGATATTCAAT+TGG - chr1_1:35570015-35570034 Msa0020540:CDS 45.0%
!!! TTTTTAATTTGTAATATTAT+AGG - chr1_1:35561400-35561419 Msa0020540:intron 5.0%
!! TATACAAAAATAAAATTATA+AGG + chr1_1:35566264-35566283 None:intergenic 5.0%
CTCTTCTGTTGCGTTGGATC+TGG + chr1_1:35560620-35560639 None:intergenic 50.0%
GAAGATGAAGGTTGGAGCCA+TGG + chr1_1:35560659-35560678 None:intergenic 50.0%
! AAGAGTGCGAGGGAAGATGA+AGG + chr1_1:35560671-35560690 None:intergenic 50.0%
! GTTGTTGTTGTCGTCTTCGG+AGG + chr1_1:35560716-35560735 None:intergenic 50.0%
!!! TAGGGTTTTGGACGGAGAGA+TGG + chr1_1:35560738-35560757 None:intergenic 50.0%
GAGAGGGAGGAGATGTTTGT+AGG + chr1_1:35560757-35560776 None:intergenic 50.0%
!! GAATTCTTCGAGTTGGGAGG+AGG + chr1_1:35560779-35560798 None:intergenic 50.0%
!! GACGAATTCTTCGAGTTGGG+AGG + chr1_1:35560782-35560801 None:intergenic 50.0%
GGTCGAATACGTCTTGGTCT+TGG + chr1_1:35560849-35560868 None:intergenic 50.0%
GCATGGTGTATTGCGGTTTC+AGG - chr1_1:35561905-35561924 Msa0020540:intron 50.0%
TGGTGTATTGCGGTTTCAGG+TGG - chr1_1:35561908-35561927 Msa0020540:intron 50.0%
! TGTATTGCGGTTTCAGGTGG+TGG - chr1_1:35561911-35561930 Msa0020540:intron 50.0%
TTCAGTATCCGAGCTCTCTG+TGG + chr1_1:35561984-35562003 None:intergenic 50.0%
GATGCCCTCTGTCGCATAAT+CGG - chr1_1:35562224-35562243 Msa0020540:CDS 50.0%
ATGCCCTCTGTCGCATAATC+GGG - chr1_1:35562225-35562244 Msa0020540:CDS 50.0%
GAATGCTCTTGTAGCTGTGC+TGG - chr1_1:35562565-35562584 Msa0020540:intron 50.0%
ATGCTCTTGTAGCTGTGCTG+GGG - chr1_1:35562567-35562586 Msa0020540:intron 50.0%
! TGGTTTGTGGAACGAGGTTG+CGG - chr1_1:35562772-35562791 Msa0020540:intron 50.0%
AATGAAGCTACTCGGAGCTG+TGG + chr1_1:35562893-35562912 None:intergenic 50.0%
GCTCCGAGTAGCTTCATTTG+AGG - chr1_1:35562895-35562914 Msa0020540:intron 50.0%
TGTGCCTGATGTTGGGAACT+TGG - chr1_1:35563117-35563136 Msa0020540:intron 50.0%
TGCTCCAAGTTCCCAACATC+AGG + chr1_1:35563124-35563143 None:intergenic 50.0%
TTGGGAACTTGGAGCAGACT+AGG - chr1_1:35563128-35563147 Msa0020540:intron 50.0%
TGGGAACTTGGAGCAGACTA+GGG - chr1_1:35563129-35563148 Msa0020540:intron 50.0%
!! TTGGACAAGTGTCGGCATTG+TGG + chr1_1:35563206-35563225 None:intergenic 50.0%
GCCGACACTTGTCCAATTGA+TGG - chr1_1:35563210-35563229 Msa0020540:intron 50.0%
TGGCATTTGCTCTCGGTTGT+AGG - chr1_1:35563538-35563557 Msa0020540:intron 50.0%
AGCTGCTAGATCTCCTGTGT+TGG + chr1_1:35563678-35563697 None:intergenic 50.0%
! AGTTGGCACACTGGTCTCTA+AGG - chr1_1:35563709-35563728 Msa0020540:CDS 50.0%
! GTTGGCACACTGGTCTCTAA+GGG - chr1_1:35563710-35563729 Msa0020540:CDS 50.0%
CAAGCTGTCCTTGCCAGTAA+AGG + chr1_1:35564593-35564612 None:intergenic 50.0%
CAGAAAGCCTCTCGATAGCA+AGG + chr1_1:35564616-35564635 None:intergenic 50.0%
AGGCAGAGTACAGACAGCAA+TGG - chr1_1:35565019-35565038 Msa0020540:intron 50.0%
AGCAATGGCACAGCATCAAC+CGG - chr1_1:35565034-35565053 Msa0020540:intron 50.0%
AGCATCAACCGGTACACAGA+AGG - chr1_1:35565045-35565064 Msa0020540:intron 50.0%
GTTAGGATTTGCAGCCTCTG+AGG - chr1_1:35565211-35565230 Msa0020540:intron 50.0%
ATCAAGTGCAGCATCCTCAG+AGG + chr1_1:35565228-35565247 None:intergenic 50.0%
! GGACAGACAAATGGAAGCAC+TGG - chr1_1:35566555-35566574 Msa0020540:intron 50.0%
!! CAGACAAATGGAAGCACTGG+TGG - chr1_1:35566558-35566577 Msa0020540:intron 50.0%
CAGAAGATTGACAGCAGGGA+AGG - chr1_1:35567090-35567109 Msa0020540:CDS 50.0%
AGGGGAGCTAGTTAGCTAGT+TGG + chr1_1:35567665-35567684 None:intergenic 50.0%
AGGGTGTGGGTAACTGATTG+GGG + chr1_1:35567755-35567774 None:intergenic 50.0%
! GAGGGTGTGGGTAACTGATT+GGG + chr1_1:35567756-35567775 None:intergenic 50.0%
! AAGTGTGTGTCGAGGGGTAT+TGG + chr1_1:35567796-35567815 None:intergenic 50.0%
AAAGCACGAGACGATGCTTG+CGG + chr1_1:35568411-35568430 None:intergenic 50.0%
TTATAGGAGCTCAACGGTCC+AGG - chr1_1:35568563-35568582 Msa0020540:intron 50.0%
AAAGAGCTACTCGGTCTAGG+AGG - chr1_1:35568864-35568883 Msa0020540:intron 50.0%
! TCCTTGGTAGTCCTGCTCTA+TGG - chr1_1:35569883-35569902 Msa0020540:CDS 50.0%
TGACATTGCAGCCATAGAGC+AGG + chr1_1:35569897-35569916 None:intergenic 50.0%
TGCTCTATGGCTGCAATGTC+AGG - chr1_1:35569896-35569915 Msa0020540:CDS 50.0%
GCTCTATGGCTGCAATGTCA+GGG - chr1_1:35569897-35569916 Msa0020540:CDS 50.0%
ATGGCTGCAATGTCAGGGTT+TGG - chr1_1:35569902-35569921 Msa0020540:CDS 50.0%
! AGTGGAGCACTTCTTCTCAG+AGG - chr1_1:35569948-35569967 Msa0020540:CDS 50.0%
! CTGTGTGGAAGCGTACCGTT+GGG + chr1_1:35560596-35560615 None:intergenic 55.0%
! TCTGTGTGGAAGCGTACCGT+TGG + chr1_1:35560597-35560616 None:intergenic 55.0%
TGCGTTGGATCTGGTCTGTG+TGG + chr1_1:35560611-35560630 None:intergenic 55.0%
TGGAGCCATGGAAGAGAGAG+AGG + chr1_1:35560647-35560666 None:intergenic 55.0%
GTGCGAGGGAAGATGAAGGT+TGG + chr1_1:35560667-35560686 None:intergenic 55.0%
!! CGAGGTGTTGAAGAGTGCGA+GGG + chr1_1:35560681-35560700 None:intergenic 55.0%
!! TCGAGGTGTTGAAGAGTGCG+AGG + chr1_1:35560682-35560701 None:intergenic 55.0%
CGGAGGGTGAATCTTGTTCG+AGG + chr1_1:35560699-35560718 None:intergenic 55.0%
!! TTCGAGTTGGGAGGAGGAGA+GGG + chr1_1:35560773-35560792 None:intergenic 55.0%
!! CGTCTTGGTCTTGGATGCAG+AGG + chr1_1:35560840-35560859 None:intergenic 55.0%
ATTGGGAGCCACAGAGAGCT+CGG - chr1_1:35561973-35561992 Msa0020540:intron 55.0%
GGTTCATCTGACCCTGACGA+AGG - chr1_1:35562047-35562066 Msa0020540:CDS 55.0%
TGCCCTCTGTCGCATAATCG+GGG - chr1_1:35562226-35562245 Msa0020540:CDS 55.0%
TTCGGCACCAGCAACTGCAT+CGG + chr1_1:35562342-35562361 None:intergenic 55.0%
CACAAGGAGTCGTGTGCTTC+AGG - chr1_1:35562712-35562731 Msa0020540:intron 55.0%
GAGTCGTGTGCTTCAGGTGT+GGG - chr1_1:35562718-35562737 Msa0020540:intron 55.0%
AGTCGTGTGCTTCAGGTGTG+GGG - chr1_1:35562719-35562738 Msa0020540:intron 55.0%
AGGTTGCGGAAGTTGCTGCT+GGG - chr1_1:35562786-35562805 Msa0020540:intron 55.0%
GGAAGTTGCTGCTGGGAGAT+TGG - chr1_1:35562793-35562812 Msa0020540:intron 55.0%
AGTTGCTGCTGGGAGATTGG+AGG - chr1_1:35562796-35562815 Msa0020540:intron 55.0%
CTCGGAGCTGTGGACCAAAT+GGG + chr1_1:35562883-35562902 None:intergenic 55.0%
ACTCGGAGCTGTGGACCAAA+TGG + chr1_1:35562884-35562903 None:intergenic 55.0%
AGCCTCAAGCGATGCAACCA+AGG + chr1_1:35563155-35563174 None:intergenic 55.0%
TTGGTTGCATCGCTTGAGGC+TGG - chr1_1:35563154-35563173 Msa0020540:intron 55.0%
TCTCCGAAAGATGTTGCCCC+TGG - chr1_1:35563318-35563337 Msa0020540:intron 55.0%
! CAGCTTGCCTTGCTATCGAG+AGG - chr1_1:35564606-35564625 Msa0020540:intron 55.0%
GGTGTGGGTAACTGATTGGG+GGG + chr1_1:35567753-35567772 None:intergenic 55.0%
GGGTGTGGGTAACTGATTGG+GGG + chr1_1:35567754-35567773 None:intergenic 55.0%
! GGAGGGTGTGGGTAACTGAT+TGG + chr1_1:35567757-35567776 None:intergenic 55.0%
!! TGTCGAGGGGTATTGGCAAG+GGG + chr1_1:35567789-35567808 None:intergenic 55.0%
!! GTGTCGAGGGGTATTGGCAA+GGG + chr1_1:35567790-35567809 None:intergenic 55.0%
!! TGTGTCGAGGGGTATTGGCA+AGG + chr1_1:35567791-35567810 None:intergenic 55.0%
GCCATAGAGCAGGACTACCA+AGG + chr1_1:35569887-35569906 None:intergenic 55.0%
!! CTTCGAGTTGGGAGGAGGAG+AGG + chr1_1:35560774-35560793 None:intergenic 60.0%
GGCCCCGATTATGCGACAGA+GGG + chr1_1:35562231-35562250 None:intergenic 60.0%
AGGCCCCGATTATGCGACAG+AGG + chr1_1:35562232-35562251 None:intergenic 60.0%
! CAGCAACTGCATCGGCCATG+TGG + chr1_1:35562334-35562353 None:intergenic 60.0%
CACATGGCCGATGCAGTTGC+TGG - chr1_1:35562332-35562351 Msa0020540:CDS 60.0%
GGAGTCGTGTGCTTCAGGTG+TGG - chr1_1:35562717-35562736 Msa0020540:intron 60.0%
GTCGTGTGCTTCAGGTGTGG+GGG - chr1_1:35562720-35562739 Msa0020540:intron 60.0%
TCGTGTGCTTCAGGTGTGGG+GGG - chr1_1:35562721-35562740 Msa0020540:intron 60.0%
GGTGTGGGGGGAGTTATGTG+AGG - chr1_1:35562733-35562752 Msa0020540:intron 60.0%
GAGGTTGCGGAAGTTGCTGC+TGG - chr1_1:35562785-35562804 Msa0020540:intron 60.0%
CTTGGAGCAGACTAGGGCCT+TGG - chr1_1:35563135-35563154 Msa0020540:intron 60.0%
GGCCTTGGTTGCATCGCTTG+AGG - chr1_1:35563150-35563169 Msa0020540:intron 60.0%
AGCACCACGGCTTTGCTCTG+CGG + chr1_1:35564468-35564487 None:intergenic 60.0%
ATTGGCAAGGGGGTGGAGGT+GGG + chr1_1:35567778-35567797 None:intergenic 60.0%
TATTGGCAAGGGGGTGGAGG+TGG + chr1_1:35567779-35567798 None:intergenic 60.0%
!! GTCGAGGGGTATTGGCAAGG+GGG + chr1_1:35567788-35567807 None:intergenic 60.0%
CGAGACGATGCTTGCGGTAC+AGG + chr1_1:35568405-35568424 None:intergenic 60.0%
GAGTTGGGAGGAGGAGAGGG+AGG + chr1_1:35560770-35560789 None:intergenic 65.0%
! AGGTGGTGGCCGCAAGTAGC+AGG - chr1_1:35561925-35561944 Msa0020540:intron 65.0%
ACCACCGCAGAGCAAAGCCG+TGG - chr1_1:35564461-35564480 Msa0020540:CDS 65.0%
ACCACGGCTTTGCTCTGCGG+TGG + chr1_1:35564465-35564484 None:intergenic 65.0%
!! GGGTATTGGCAAGGGGGTGG+AGG + chr1_1:35567782-35567801 None:intergenic 65.0%
!! GAGGGGTATTGGCAAGGGGG+TGG + chr1_1:35567785-35567804 None:intergenic 65.0%
! GGGTGGAGGTGGGAGGGTGT+GGG + chr1_1:35567768-35567787 None:intergenic 70.0%
GCAAGGGGGTGGAGGTGGGA+GGG + chr1_1:35567774-35567793 None:intergenic 70.0%
GGGGTGGAGGTGGGAGGGTG+TGG + chr1_1:35567769-35567788 None:intergenic 75.0%
GGCAAGGGGGTGGAGGTGGG+AGG + chr1_1:35567775-35567794 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 35560560 35570154 35560560 ID=Msa0020540;Name=Msa0020540
chr1_1 mRNA 35560560 35570154 35560560 ID=Msa0020540-mRNA-1;Parent=Msa0020540;Name=Msa0020540-mRNA-1;_AED=0.04;_eAED=0.04;_QI=98|1|1|1|0.93|0.94|17|371|1382
chr1_1 exon 35560560 35560934 35560560 ID=Msa0020540-mRNA-1:exon:11370;Parent=Msa0020540-mRNA-1
chr1_1 exon 35561829 35561919 35561829 ID=Msa0020540-mRNA-1:exon:11369;Parent=Msa0020540-mRNA-1
chr1_1 exon 35561996 35562145 35561996 ID=Msa0020540-mRNA-1:exon:11368;Parent=Msa0020540-mRNA-1
chr1_1 exon 35562219 35562392 35562219 ID=Msa0020540-mRNA-1:exon:11367;Parent=Msa0020540-mRNA-1
chr1_1 exon 35563549 35563747 35563549 ID=Msa0020540-mRNA-1:exon:11366;Parent=Msa0020540-mRNA-1
chr1_1 exon 35563842 35563993 35563842 ID=Msa0020540-mRNA-1:exon:11365;Parent=Msa0020540-mRNA-1
chr1_1 exon 35564101 35564158 35564101 ID=Msa0020540-mRNA-1:exon:11364;Parent=Msa0020540-mRNA-1
chr1_1 exon 35564238 35564353 35564238 ID=Msa0020540-mRNA-1:exon:11363;Parent=Msa0020540-mRNA-1
chr1_1 exon 35564460 35564559 35564460 ID=Msa0020540-mRNA-1:exon:11362;Parent=Msa0020540-mRNA-1
chr1_1 exon 35564645 35564867 35564645 ID=Msa0020540-mRNA-1:exon:11361;Parent=Msa0020540-mRNA-1
chr1_1 exon 35564969 35565036 35564969 ID=Msa0020540-mRNA-1:exon:11360;Parent=Msa0020540-mRNA-1
chr1_1 exon 35565347 35565523 35565347 ID=Msa0020540-mRNA-1:exon:11359;Parent=Msa0020540-mRNA-1
chr1_1 exon 35565648 35566295 35565648 ID=Msa0020540-mRNA-1:exon:11358;Parent=Msa0020540-mRNA-1
chr1_1 exon 35566963 35567154 35566963 ID=Msa0020540-mRNA-1:exon:11357;Parent=Msa0020540-mRNA-1
chr1_1 exon 35567375 35568545 35567375 ID=Msa0020540-mRNA-1:exon:11356;Parent=Msa0020540-mRNA-1
chr1_1 exon 35568624 35568787 35568624 ID=Msa0020540-mRNA-1:exon:11355;Parent=Msa0020540-mRNA-1
chr1_1 exon 35569595 35570154 35569595 ID=Msa0020540-mRNA-1:exon:11354;Parent=Msa0020540-mRNA-1
chr1_1 five_prime_UTR 35570057 35570154 35570057 ID=Msa0020540-mRNA-1:five_prime_utr;Parent=Msa0020540-mRNA-1
chr1_1 CDS 35569595 35570056 35569595 ID=Msa0020540-mRNA-1:cds;Parent=Msa0020540-mRNA-1
chr1_1 CDS 35568624 35568787 35568624 ID=Msa0020540-mRNA-1:cds;Parent=Msa0020540-mRNA-1
chr1_1 CDS 35567375 35568545 35567375 ID=Msa0020540-mRNA-1:cds;Parent=Msa0020540-mRNA-1
chr1_1 CDS 35566963 35567154 35566963 ID=Msa0020540-mRNA-1:cds;Parent=Msa0020540-mRNA-1
chr1_1 CDS 35565648 35566295 35565648 ID=Msa0020540-mRNA-1:cds;Parent=Msa0020540-mRNA-1
chr1_1 CDS 35565347 35565523 35565347 ID=Msa0020540-mRNA-1:cds;Parent=Msa0020540-mRNA-1
chr1_1 CDS 35564969 35565036 35564969 ID=Msa0020540-mRNA-1:cds;Parent=Msa0020540-mRNA-1
chr1_1 CDS 35564645 35564867 35564645 ID=Msa0020540-mRNA-1:cds;Parent=Msa0020540-mRNA-1
chr1_1 CDS 35564460 35564559 35564460 ID=Msa0020540-mRNA-1:cds;Parent=Msa0020540-mRNA-1
chr1_1 CDS 35564238 35564353 35564238 ID=Msa0020540-mRNA-1:cds;Parent=Msa0020540-mRNA-1
chr1_1 CDS 35564101 35564158 35564101 ID=Msa0020540-mRNA-1:cds;Parent=Msa0020540-mRNA-1
chr1_1 CDS 35563842 35563993 35563842 ID=Msa0020540-mRNA-1:cds;Parent=Msa0020540-mRNA-1
chr1_1 CDS 35563549 35563747 35563549 ID=Msa0020540-mRNA-1:cds;Parent=Msa0020540-mRNA-1
chr1_1 CDS 35562219 35562392 35562219 ID=Msa0020540-mRNA-1:cds;Parent=Msa0020540-mRNA-1
chr1_1 CDS 35561996 35562145 35561996 ID=Msa0020540-mRNA-1:cds;Parent=Msa0020540-mRNA-1
chr1_1 CDS 35561829 35561919 35561829 ID=Msa0020540-mRNA-1:cds;Parent=Msa0020540-mRNA-1
chr1_1 CDS 35560931 35560934 35560931 ID=Msa0020540-mRNA-1:cds;Parent=Msa0020540-mRNA-1
chr1_1 three_prime_UTR 35560560 35560930 35560560 ID=Msa0020540-mRNA-1:three_prime_utr;Parent=Msa0020540-mRNA-1
Gene Sequence

>Msa0020540

ATGGCTCCAACCTTCATCTTCCCTCGCACTCTTCAACACCTCGAACAAGATTCACCCTCCGAAGACGACAACAACAACCATCTCTCCGTCCAAAACCCTACAAACATCTCCTCCCTCTCCTCCTCCCAACTCGAAGAATTCGTCAAAGGCGTCTCATTCGATCTCTCCGACAGAGAAATCCTCTGCATCCAAGACCAAGACGTATTCGACCGTGTTTACTCTTTGGTTCGCGGTTACTCTTCTTTACATCATTCATGTAAACTCAACCTTGTTGAAAGTCTCCGTTCTAATCTCGCTGTTCTTCTTCCTAATGTTGATTCGCTTTCAAGGGTTTCTAATGAAGATGTTGATGATCATGTTCTTGTTGTTGACCGTGTTGCTTCTCATCGTAATGCTTTTAAAATTTACACCTACTTTCTTCTTAATATTGTTCTCGCTGAAGATTCCAGCAATGCTCCTAAGGTGGTGGCCGCAAGTAGCAGGAAGAAACAACCCGTGCATTCATGGAATTGGGAGCCACAGAGAGCTCGGATACTGAATCTCATTGCAAGCTCATTGGAGATAAACCTTGAATTACTTTTTGGTTCATCTGACCCTGACGAAGGTTACTTGTCTTTCATCACAAAAAATGCATTCGCCATGTTTGAAAATGCCGCGCTTTTGAAAGATTCCAACTCAAAAGATGCCCTCTGTCGCATAATCGGGGCCTGCTCCACAAAGTACCATTACACGACACAGTCTAGTGTATCCATCATGCATCTTATTCACAAGTATGATTTTGTTGTCGTCCACATGGCCGATGCAGTTGCTGGTGCCGAAAAGAAGTATTCAGATGGAAGCCTTGCAACTTCCATTGTTAGGGAAATTGGAAGGACTAATCCAAAAGATTATGTCAAAGATACTATTGGTGCTGAAAATGTGGGGCGTTTTCTTGTGGAGTTAGCTGACCGTATTCCAAAATTGATATCAACTAACATTGGCATTCTTGTTCCTCACTTTGGTGGAGAGTCTTATAAGATTAGGAATGCTCTTGTAGCTGTGCTGGGGAAGCTAGTATCAAAAGCTTTTAAGGATATTGATGGTGAAGCGAGTACGAAGAACATTCGGTTACGCACTAAACAAGCTATGTTGGAAATTTTACTTGAGAGATGTAGGGATGTTTCTGCTTACACAAGGAGTCGTGTGCTTCAGGTGTGGGGGGAGTTATGTGAGGAACACTCAGTTTCGATTGGTTTGTGGAACGAGGTTGCGGAAGTTGCTGCTGGGAGATTGGAGGACAAGAGTGCAATAGTCAGAAAATCTGCTTTGAATCTTTTGATCATGATGTTGCAGCATAACCCATTTGGTCCACAGCTCCGAGTAGCTTCATTTGAGGCAACTTTGGATCAGTATAGGAAGAAGTTGAAAGAGCTTGAGCCTTCAGAAGGTTCTGACAATGAAAACTCTAACGTGGATGGTGAGGTAGATGATTTGAATTTTGAAGCTGTTGAGAAGGAGCGGCAAGAGAGTGTGACTGATACATTCATGTCACAGGAAGAAGATGCAATCCCTATGCAGAATGGTAGTGATAGTAGTGTGCCTGATGTTGGGAACTTGGAGCAGACTAGGGCCTTGGTTGCATCGCTTGAGGCTGGTTTGAGATTCTCTAAATGTATAGAGGCCACAATGCCGACACTTGTCCAATTGATGGCATCATCTTCTGCTTCTGATGTTGAAAATACAATTCTCTTGTTGATGAGGTGTAAGCAATTTCAAATTGATGGCTCAGAAGAATGTCTCCGAAAGATGTTGCCCCTGGCATTTTCTCAGGATAAATCAATCTTTGAAGCAGTGGAGAATGCTTTCAGTACAATATACATAAGGAAAAACCCAATGGAAACTGCCAAGAATCTCTTGAGTCTTGCAACTGATTCCAACACAGGAGATCTAGCAGCTCTTGAGTTTATAGTTGGCACACTGGTCTCTAAGGGAGATATATCTTCCAGCACAATATCAGCTTTATGGGATTTCTTTTGCTTCAATGTTGGTGGAACCACCGCAGAGCAAAGCCGTGGTGCTTTATCTGTCCTTTGCATGGTTGAAAAGACATCAACTGGTGTGCTTGGCTCTCATTTACAAGACATCATTGATATTGGGTTTGGTCGTTGGTCTAAAGTTGATCCTTTACTGGCAAGGACAGCTTGCCTTGCTATCGAGAGGCTTTCTGAAGATGACAAGGCAAAATTGTTGGCAAATAATAGTGTTAGAATATTTGGCATTCTCGATAGTTTAATTACTGGCTTTTGGCTTCCAGCAAATATTTGGTATGCAGCTGCTGACAAAGCAATAACTGCCATTTATGCTGTTCACCCTACTCCAGAAATCATAGCAGCTGACATGATAAAGAAATCCCTCAGTTCTGTTTATAAGGATTGTGGTGGCAGTGACACTGACACTAGTAGCAGCATGCCAATCACAGTTCAAGTCGCAAAGCTGAGTAGATGTTTATTTGTCATAAGTCATACAGCCATGAATCAATTGGTCTATATTGAATCATGTGCTCGTAAAATTCAGAAGCAGAAACTTGCAAAAGAGAGAAAGGACATTGAGAGGCAGAGTACAGACAGCAATGGCACAGCATCAACCGGTACACAGAAGGATAATGATATAAATGCCGAGTTAGGATTTGCAGCCTCTGAGGATGCTGCACTTGATGCAATGTTTGAAAAAGCAGAAAAGGAAATTGTTTCTGGCGGTTCAAAGGACAAGAATTTGGTTGGTATCTGTGCAACCTTTTTGTCAAAGCTTTGTAGAAATTTTGGACTACTGCAGAAGTATCCAGAACTACAGGCTTCTGCAATGCTAGCTTTGTGTCGATTGATGGTCATTGATGCAGACTTTTGTGATGCAAATCTTCAGCTTCTCTTCACAGTTGTGGAAAATGCACAGTCAGAAATTGTCCGTTCTAATTGCACTATTGCACTAGGAGATTTAGCAGTAAGGTTTCCCAATCTTTTAGAACCATGGACTGAAAAAATGTATGCCCGCCTACAAGATACTTCTATATCTGTTAGGAAGAATGCGGTTCTGGTGCTTTCACATCTCATACTAAATGACATGATGAAGGTGAAAGGGTACATTAATGAAATGGCAGTTAGATTAGAAGACGAAGATGAGAGAATTTCAAATCTGGCTAAGCTGTTTTTTCTTGAACTTTCCAAGAAAGGAAACAATCCAATATATAATTTGCTTCCTGACATACTTAGCAAATTATCCAAGCAGAACCTGAGCAATGAATCTTTCTGCAACATCATGCAATTTTTAATTGCTTCCATTAAGAAGGACAGACAAATGGAAGCACTGGTGGAAAAGCTATGTAATCGGTTTAGTGGTGTCACAGATGTCAGACAGTGGGAGCATATATCTTATTGTCTATCTCAGCTATCATTTACTGAAAAGGGGATGAAAAAACTCATAGATTTATTTAAGACCTATGAACATGCCTTGTCAGAGGATTCTGTTATGGATAATTTTAGAAACATATTAAACAAGGCAAAGAAGTTTGCAAAATTGGAACTTAAAACTTACATTGAGGAGTTTGAAGATAAGCTGAATAAGTTCCACATGGAAAAGAAGGAACAGGAAGTTACTGCTCGAAATGCCCAAATCCATCAACAGAAGATTGACAGCAGGGAAGGCTTTAATGTGAATAAAAATTCCGAAGATCACTCGAAGTCTAATACATCTTCAGATGAAGTAGATGGTGAAGTAATTGATACAAGCACTGAAGGGATAAATGCTTTGTCTATAAATGGCAAATCAAGTTCTAAACCTGTACCGCAAGCATCGTCTCGTGCTTTGAGTGAATTGATTGAATCAGATCAAGTGGATATTGAAGTCCAGTCACCCATGGTTAAGACAACAGGAGCTCAACGGTCCAGGATTAAAACAACCAATGTGAAAGGTGAAAAAGGTGATATCTCTATCACCAAAGCATCTTCTAGTGTTTTGAGTGAATTGATTGAATCAGATCAAGTGGATATTGAAGTCCAATCACCCATGGTTAAGACAAGAGGAGCTCAACGGTCCAGAGTTAAAAAAACCAATGTGAAAGATGAAAATGGTGATATCTCTATCACCAAGAAAAGAGCTACTCGGTCTAGGAGGTAA
Protein sequence

>Msa0020540

MAPTFIFPRTLQHLEQDSPSEDDNNNHLSVQNPTNISSLSSSQLEEFVKGVSFDLSDREILCIQDQDVFDRVYSLVRGYSSLHHSCKLNLVESLRSNLAVLLPNVDSLSRVSNEDVDDHVLVVDRVASHRNAFKIYTYFLLNIVLAEDSSNAPKVVAASSRKKQPVHSWNWEPQRARILNLIASSLEINLELLFGSSDPDEGYLSFITKNAFAMFENAALLKDSNSKDALCRIIGACSTKYHYTTQSSVSIMHLIHKYDFVVVHMADAVAGAEKKYSDGSLATSIVREIGRTNPKDYVKDTIGAENVGRFLVELADRIPKLISTNIGILVPHFGGESYKIRNALVAVLGKLVSKAFKDIDGEASTKNIRLRTKQAMLEILLERCRDVSAYTRSRVLQVWGELCEEHSVSIGLWNEVAEVAAGRLEDKSAIVRKSALNLLIMMLQHNPFGPQLRVASFEATLDQYRKKLKELEPSEGSDNENSNVDGEVDDLNFEAVEKERQESVTDTFMSQEEDAIPMQNGSDSSVPDVGNLEQTRALVASLEAGLRFSKCIEATMPTLVQLMASSSASDVENTILLLMRCKQFQIDGSEECLRKMLPLAFSQDKSIFEAVENAFSTIYIRKNPMETAKNLLSLATDSNTGDLAALEFIVGTLVSKGDISSSTISALWDFFCFNVGGTTAEQSRGALSVLCMVEKTSTGVLGSHLQDIIDIGFGRWSKVDPLLARTACLAIERLSEDDKAKLLANNSVRIFGILDSLITGFWLPANIWYAAADKAITAIYAVHPTPEIIAADMIKKSLSSVYKDCGGSDTDTSSSMPITVQVAKLSRCLFVISHTAMNQLVYIESCARKIQKQKLAKERKDIERQSTDSNGTASTGTQKDNDINAELGFAASEDAALDAMFEKAEKEIVSGGSKDKNLVGICATFLSKLCRNFGLLQKYPELQASAMLALCRLMVIDADFCDANLQLLFTVVENAQSEIVRSNCTIALGDLAVRFPNLLEPWTEKMYARLQDTSISVRKNAVLVLSHLILNDMMKVKGYINEMAVRLEDEDERISNLAKLFFLELSKKGNNPIYNLLPDILSKLSKQNLSNESFCNIMQFLIASIKKDRQMEALVEKLCNRFSGVTDVRQWEHISYCLSQLSFTEKGMKKLIDLFKTYEHALSEDSVMDNFRNILNKAKKFAKLELKTYIEEFEDKLNKFHMEKKEQEVTARNAQIHQQKIDSREGFNVNKNSEDHSKSNTSSDEVDGEVIDTSTEGINALSINGKSSSKPVPQASSRALSELIESDQVDIEVQSPMVKTTGAQRSRIKTTNVKGEKGDISITKASSSVLSELIESDQVDIEVQSPMVKTRGAQRSRVKKTNVKDENGDISITKKRATRSRR*