Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0469070 | XP_003601866.1 | 95.514 | 535 | 21 | 1 | 1 | 535 | 1 | 532 | 0.0 | 1049 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0469070 | sp|Q9FYL3|ALB4_ARATH | 59.743 | 467 | 166 | 7 | 48 | 504 | 45 | 499 | 0.0 | 529 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0469070 | G7J2L0 | 95.514 | 535 | 21 | 1 | 1 | 535 | 1 | 532 | 0.0 | 1049 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0018470 | Msa0469070 | 0.819359 | 1.210652e-52 | -8.615850e-47 |
| Msa0225880 | Msa0469070 | 0.865431 | 5.936103e-65 | -8.615850e-47 |
| Msa0469070 | Msa1180050 | 0.807851 | 4.131129e-50 | -8.615850e-47 |
| Msa0469070 | Msa1270770 | 0.803247 | 3.817969e-49 | -8.615850e-47 |
| Msa0260470 | Msa0469070 | 0.859883 | 3.038884e-63 | -8.615850e-47 |
| Msa0304110 | Msa0469070 | 0.856442 | 3.208331e-62 | -8.615850e-47 |
| Msa0341190 | Msa0469070 | 0.851422 | 8.968618e-61 | -8.615850e-47 |
| Msa0358290 | Msa0469070 | 0.800817 | 1.206527e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0469070 | MtrunA17_Chr3g0123281 | 95.514 | 535 | 21 | 1 | 1 | 535 | 1 | 532 | 0.0 | 1049 |
| Msa0469070 | MtrunA17_Chr4g0031291 | 60.231 | 347 | 116 | 2 | 71 | 417 | 56 | 380 | 1.66e-143 | 421 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0469070 | AT1G24490.1 | 59.743 | 467 | 166 | 7 | 48 | 504 | 45 | 499 | 0.0 | 529 |
| Msa0469070 | AT2G28800.1 | 58.564 | 362 | 128 | 3 | 63 | 424 | 68 | 407 | 7.10e-152 | 443 |
| Msa0469070 | AT1G24490.2 | 52.677 | 467 | 162 | 8 | 48 | 504 | 45 | 462 | 5.30e-151 | 441 |
| Msa0469070 | AT2G28800.2 | 66.182 | 275 | 92 | 1 | 63 | 337 | 68 | 341 | 1.17e-135 | 397 |
| Msa0469070 | AT2G28800.3 | 65.942 | 276 | 93 | 1 | 63 | 338 | 68 | 342 | 1.24e-135 | 397 |
| Msa0469070 | AT2G28800.4 | 52.486 | 362 | 120 | 4 | 63 | 424 | 68 | 377 | 2.50e-127 | 379 |
Find 179 sgRNAs with CRISPR-Local
Find 412 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGCAGATTTAAGCAATTAA+TGG | 0.197676 | 3_3:+70778914 | Msa0469070:intron |
| GATCCCCGGCATACTGTTTC+TGG | 0.205489 | 3_3:-70775983 | None:intergenic |
| GAGAATAGTTTCCATATAAT+TGG | 0.217833 | 3_3:-70774746 | None:intergenic |
| GTAACAGAGCCGCCATTATT+TGG | 0.218495 | 3_3:-70774402 | None:intergenic |
| TTCTGGAATTACCAATTATA+TGG | 0.221898 | 3_3:+70774735 | Msa0469070:CDS |
| CTTCAGGTCTTAGCCTTTAC+TGG | 0.230607 | 3_3:+70778507 | Msa0469070:CDS |
| CACCAACTAGTTAATAAATA+AGG | 0.239486 | 3_3:+70779975 | Msa0469070:three_prime_UTR |
| TGAGCACTTTACAGCAAATA+TGG | 0.272942 | 3_3:+70778631 | Msa0469070:CDS |
| TCCTCAATGAAGGCTTCTTT+TGG | 0.280992 | 3_3:+70777109 | Msa0469070:CDS |
| TAACAGAGCCGCCATTATTT+GGG | 0.289743 | 3_3:-70774401 | None:intergenic |
| TTCATTTCAACCCCAAATAA+TGG | 0.301289 | 3_3:+70774390 | Msa0469070:intron |
| TGGGTTTAATTTAGATTTGA+TGG | 0.303542 | 3_3:+70779898 | Msa0469070:three_prime_UTR |
| TCTATATCTGGAGTAATAAA+TGG | 0.305870 | 3_3:+70779098 | Msa0469070:CDS |
| ATATGACAAGCAGGCTATAA+AGG | 0.311142 | 3_3:-70780005 | None:intergenic |
| TGTTGGCTAATTTATATAAC+CGG | 0.311681 | 3_3:-70776580 | None:intergenic |
| TTTGCTCTTTCAGTTCCTTC+AGG | 0.318038 | 3_3:+70778491 | Msa0469070:CDS |
| TTGCATGTGCCGTATGCTTA+TGG | 0.338465 | 3_3:+70775652 | Msa0469070:CDS |
| ACAAGGTAAGCCAATGTATC+TGG | 0.340003 | 3_3:-70777737 | None:intergenic |
| GATACTGATCCATCTATATC+TGG | 0.353143 | 3_3:+70779086 | Msa0469070:CDS |
| TTGGCCGGTCGGCATGGGTT+GGG | 0.365059 | 3_3:+70779879 | Msa0469070:three_prime_UTR |
| ACTTGAGAACTCTTCACATT+AGG | 0.367467 | 3_3:-70778434 | None:intergenic |
| GCAAAATAACCAATCACTAA+TGG | 0.368557 | 3_3:-70778473 | None:intergenic |
| TCTCTTCTCCGTTCGTAAAC+CGG | 0.376526 | 3_3:+70774443 | Msa0469070:CDS |
| CCTGTGATGACTGCATTATC+TGG | 0.377948 | 3_3:-70777799 | None:intergenic |
| TTATGGAAGTTCTCGGATAA+TGG | 0.380434 | 3_3:-70780102 | None:intergenic |
| ATCATAAGAAAATACTATAA+AGG | 0.382245 | 3_3:-70780182 | None:intergenic |
| TTTATTACTCCAGATATAGA+TGG | 0.383581 | 3_3:-70779095 | None:intergenic |
| CAAATATGGCTTCAAAAGTT+AGG | 0.388209 | 3_3:+70778645 | Msa0469070:CDS |
| ATTGGCCGGTCGGCATGGGT+TGG | 0.388225 | 3_3:+70779878 | Msa0469070:three_prime_UTR |
| CTGGTTGACAATACTTCTCT+TGG | 0.389333 | 3_3:-70779623 | None:intergenic |
| GTCCTTATTTATTAACTAGT+TGG | 0.389346 | 3_3:-70779977 | None:intergenic |
| TGGCTGACATGCAGCTTTGT+AGG | 0.392585 | 3_3:+70779918 | Msa0469070:three_prime_UTR |
| TTGCTTGTTTGTAGTAGCTC+TGG | 0.402366 | 3_3:-70779642 | None:intergenic |
| TCTACATTGGCCGGTCGGCA+TGG | 0.402664 | 3_3:+70779873 | Msa0469070:three_prime_UTR |
| AGAAAGCGTTTGGTCGAGCC+TGG | 0.407581 | 3_3:-70774511 | None:intergenic |
| AGCTTTAGCTGCTGCTTCCT+CGG | 0.409712 | 3_3:-70778985 | None:intergenic |
| ATTGAGGTATTTACCACAAA+AGG | 0.411047 | 3_3:-70777201 | None:intergenic |
| GCAACGTCCCATTCGATTTG+AGG | 0.414807 | 3_3:+70779794 | Msa0469070:three_prime_UTR |
| TGAGAGACAACCAGCAAAAC+AGG | 0.419411 | 3_3:-70777764 | None:intergenic |
| AAGGTCCTTCCATTAGTGAT+TGG | 0.421912 | 3_3:+70778464 | Msa0469070:CDS |
| TGCCGAGCTGCAATTGTAGT+TGG | 0.421938 | 3_3:-70777150 | None:intergenic |
| CATTCATTCCATCATTTATG+TGG | 0.423996 | 3_3:-70779837 | None:intergenic |
| GTTATTCTGTTTAGCGGCGG+TGG | 0.425273 | 3_3:-70774704 | None:intergenic |
| AGAACGAATTCAGCATCTTC+CGG | 0.426884 | 3_3:-70774589 | None:intergenic |
| GCGGTTCTCTTTCCGTTGCC+CGG | 0.428895 | 3_3:+70774536 | Msa0469070:CDS |
| CAGTATCATCAGCCACAGAT+TGG | 0.429224 | 3_3:-70779070 | None:intergenic |
| CTACATTGGCCGGTCGGCAT+GGG | 0.431636 | 3_3:+70779874 | Msa0469070:three_prime_UTR |
| TCTCTTTCCGTTGCCCGGTT+CGG | 0.433299 | 3_3:+70774541 | Msa0469070:CDS |
| AGCAGAGAGAAGAAGAGAAA+AGG | 0.433679 | 3_3:+70778958 | Msa0469070:CDS |
| CTATTTGTATTACTAAATCA+TGG | 0.437850 | 3_3:-70779767 | None:intergenic |
| GAAACAGTATGCCGGGGATC+AGG | 0.439742 | 3_3:+70775986 | Msa0469070:CDS |
| CTGGTCAAGCTGTCATCTAT+TGG | 0.440145 | 3_3:+70779744 | Msa0469070:intron |
| CCTCACTCTCACGCCTTCCC+AGG | 0.447322 | 3_3:+70774493 | Msa0469070:CDS |
| CTGTTTAGCGGCGGTGGTGG+TGG | 0.451516 | 3_3:-70774698 | None:intergenic |
| GGAAAGAAGGTACACGGAAA+TGG | 0.454867 | 3_3:-70774284 | None:intergenic |
| ATTTCCGTTGACAAGAAAAC+AGG | 0.457014 | 3_3:+70775717 | Msa0469070:CDS |
| AAGATGCTGAATTCGTTCTC+AGG | 0.462710 | 3_3:+70774593 | Msa0469070:CDS |
| CCTTGGATGGCCAGATACAT+TGG | 0.463169 | 3_3:+70777727 | Msa0469070:CDS |
| ACTGGTGTTGTTAAGAGAAC+AGG | 0.463742 | 3_3:-70776934 | None:intergenic |
| GAAGATGATTGGCTCTGCTC+CGG | 0.465360 | 3_3:-70774462 | None:intergenic |
| TTACGTGTGCTTACCAGTAA+AGG | 0.465529 | 3_3:-70778520 | None:intergenic |
| AATTCAGCATCTTCCGGCTC+GGG | 0.465542 | 3_3:-70774583 | None:intergenic |
| TTTAGCGGCGGTGGTGGTGG+TGG | 0.468764 | 3_3:-70774695 | None:intergenic |
| AGTAATAAATGGTAATAGTA+AGG | 0.469786 | 3_3:+70779109 | Msa0469070:CDS |
| AACCGGGATGAAATCCGAAC+CGG | 0.472013 | 3_3:-70774555 | None:intergenic |
| ATTCTGTTTAGCGGCGGTGG+TGG | 0.472063 | 3_3:-70774701 | None:intergenic |
| TATGACAAGCAGGCTATAAA+GGG | 0.479513 | 3_3:-70780004 | None:intergenic |
| TAACAACACCAGTGTGGATC+GGG | 0.480693 | 3_3:+70776944 | Msa0469070:CDS |
| CAGGATGGTCACCCTCCCCT+TGG | 0.481729 | 3_3:+70777710 | Msa0469070:intron |
| AAATGGTAATAGTAAGGACT+TGG | 0.484045 | 3_3:+70779115 | Msa0469070:CDS |
| CTACATTGCCACATAAATGA+TGG | 0.486362 | 3_3:+70779829 | Msa0469070:three_prime_UTR |
| AGATTTGAGGATTTCTACAT+TGG | 0.491434 | 3_3:+70779860 | Msa0469070:three_prime_UTR |
| CGTCCCATTCGATTTGAGGC+TGG | 0.492456 | 3_3:+70779798 | Msa0469070:three_prime_UTR |
| TCGACCAAACGCTTTCTTCG+CGG | 0.493631 | 3_3:+70774517 | Msa0469070:CDS |
| CTATCCAGAAACAGTATGCC+GGG | 0.495261 | 3_3:+70775979 | Msa0469070:CDS |
| AGAACCGCGAAGAAAGCGTT+TGG | 0.496212 | 3_3:-70774521 | None:intergenic |
| CTCATCAGCCACATTAGAAA+AGG | 0.496436 | 3_3:-70776977 | None:intergenic |
| ATGGTCACCCTCCCCTTGGA+TGG | 0.498411 | 3_3:+70777714 | Msa0469070:CDS |
| GATATAGTTAGAGAGACAAA+GGG | 0.505595 | 3_3:-70774228 | None:intergenic |
| CCAATCGTTATTCTGTTTAG+CGG | 0.505667 | 3_3:-70774710 | None:intergenic |
| AAACACATTATGGAAGTTCT+CGG | 0.506165 | 3_3:-70780109 | None:intergenic |
| AGTATCATCAGCCACAGATT+GGG | 0.507433 | 3_3:-70779069 | None:intergenic |
| TGGTAATAGTAAGGACTTGG+AGG | 0.511233 | 3_3:+70779118 | Msa0469070:CDS |
| TTGAGGATTTCTACATTGGC+CGG | 0.511854 | 3_3:+70779864 | Msa0469070:three_prime_UTR |
| TAACTAAGTCGTTTACAACT+TGG | 0.512587 | 3_3:-70779040 | None:intergenic |
| GCCCGGTTCGGATTTCATCC+CGG | 0.519087 | 3_3:+70774553 | Msa0469070:CDS |
| TGATATAGTTAGAGAGACAA+AGG | 0.520744 | 3_3:-70774229 | None:intergenic |
| TCATCAAGAACTTGTCTCAA+AGG | 0.525096 | 3_3:-70778681 | None:intergenic |
| GAGAGTATAGTCGGCGTGCA+AGG | 0.525605 | 3_3:-70774424 | None:intergenic |
| GCCAACATTAATCCTCTAGC+AGG | 0.526478 | 3_3:+70776596 | Msa0469070:CDS |
| TTCTGGATAGCCTTCACTTG+AGG | 0.527129 | 3_3:-70775966 | None:intergenic |
| AATCACGAACAAATAGTTGA+AGG | 0.527851 | 3_3:+70779011 | Msa0469070:CDS |
| AGGTCGAAGTGGAAGATGAT+TGG | 0.528921 | 3_3:-70774473 | None:intergenic |
| TGCTGTTTCGTCTTCCGATA+CGG | 0.530207 | 3_3:+70774663 | Msa0469070:CDS |
| ATAAAGGGACTCCTCAATGA+AGG | 0.531608 | 3_3:+70777099 | Msa0469070:intron |
| GCCAATGTATATGCTGTGAC+TGG | 0.534843 | 3_3:+70780075 | Msa0469070:three_prime_UTR |
| GATGGAATGAATGAGATTTG+AGG | 0.535373 | 3_3:+70779847 | Msa0469070:three_prime_UTR |
| AGAAGAGAAAAGGAAGGCCG+AGG | 0.538005 | 3_3:+70778968 | Msa0469070:CDS |
| GATTCAAAATTGACATCAGA+AGG | 0.538628 | 3_3:+70778786 | Msa0469070:CDS |
| ACAATTGCAGCTCGGCAAAA+CGG | 0.539767 | 3_3:+70777156 | Msa0469070:CDS |
| ACTACAAACAAGCAAGCTCA+TGG | 0.540276 | 3_3:+70779650 | Msa0469070:CDS |
| TTAACAACACCAGTGTGGAT+CGG | 0.542463 | 3_3:+70776943 | Msa0469070:CDS |
| TGAACAGAGTGGTGGAAAGA+AGG | 0.542510 | 3_3:-70774297 | None:intergenic |
| AAACTCAGATAGCGTGTCAA+AGG | 0.546399 | 3_3:+70779676 | Msa0469070:CDS |
| TCTGATACTGCAAATGATGA+AGG | 0.546671 | 3_3:+70779164 | Msa0469070:CDS |
| CCAATGTATCTGGCCATCCA+AGG | 0.546794 | 3_3:-70777727 | None:intergenic |
| TAGCATCGAATATGACAAGC+AGG | 0.549244 | 3_3:-70780014 | None:intergenic |
| TAAGCAATTAATGGAGCAAG+AGG | 0.550192 | 3_3:+70778923 | Msa0469070:CDS |
| GGTGGTTGTTATCGCCGTAT+CGG | 0.550770 | 3_3:-70774677 | None:intergenic |
| GAATTCAACTTGAAACTGCC+CGG | 0.553154 | 3_3:+70776561 | Msa0469070:CDS |
| CCAGATAATGCAGTCATCAC+AGG | 0.556890 | 3_3:+70777799 | Msa0469070:CDS |
| CAATAATGATGAGTTTATGA+CGG | 0.559627 | 3_3:+70780220 | Msa0469070:three_prime_UTR |
| TAAACCCAACCCATGCCGAC+CGG | 0.562670 | 3_3:-70779883 | None:intergenic |
| GAATTCAGCATCTTCCGGCT+CGG | 0.563019 | 3_3:-70774584 | None:intergenic |
| TAACCAGCCTCAAATCGAAT+GGG | 0.563382 | 3_3:-70779801 | None:intergenic |
| AATCGAACATACAAGTATGA+TGG | 0.565119 | 3_3:-70774252 | None:intergenic |
| GCAGCTCGGCAAAACGGAAG+TGG | 0.565660 | 3_3:+70777162 | Msa0469070:CDS |
| ATGAAATCCGAACCGGGCAA+CGG | 0.566111 | 3_3:-70774548 | None:intergenic |
| GCGTTTGGTCGAGCCTGGGA+AGG | 0.567267 | 3_3:-70774506 | None:intergenic |
| ACCGGGATGAAATCCGAACC+GGG | 0.567284 | 3_3:-70774554 | None:intergenic |
| GCTATCCAGAAACAGTATGC+CGG | 0.570574 | 3_3:+70775978 | Msa0469070:CDS |
| TACGATGGATCAATAAACTC+TGG | 0.570985 | 3_3:+70780053 | Msa0469070:three_prime_UTR |
| CCTGGGAAGGCGTGAGAGTG+AGG | 0.571222 | 3_3:-70774493 | None:intergenic |
| GCGTGAGAGTGAGGTCGAAG+TGG | 0.571903 | 3_3:-70774484 | None:intergenic |
| ATCTTTGCAACCTCAAGTGA+AGG | 0.573214 | 3_3:+70775956 | Msa0469070:CDS |
| ATCGCAAAACCATAAGCATA+CGG | 0.574336 | 3_3:-70775661 | None:intergenic |
| GAGAGAAGAAGAGAAAAGGA+AGG | 0.577366 | 3_3:+70778962 | Msa0469070:CDS |
| TTATATGGAAACTATTCTCA+AGG | 0.579317 | 3_3:+70774750 | Msa0469070:CDS |
| CATATAAAATACCTGATCCC+CGG | 0.582808 | 3_3:-70775997 | None:intergenic |
| CAATGTATCTGGCCATCCAA+GGG | 0.583688 | 3_3:-70777726 | None:intergenic |
| GAATTGTTTAACCGAGCGGA+GGG | 0.584513 | 3_3:+70774616 | Msa0469070:CDS |
| GGATTTCTACATTGGCCGGT+CGG | 0.587662 | 3_3:+70779868 | Msa0469070:three_prime_UTR |
| CGATATAGCCCGATCCACAC+TGG | 0.588953 | 3_3:-70776952 | None:intergenic |
| ACTCATCATTATTGCAAGTG+AGG | 0.589685 | 3_3:-70780211 | None:intergenic |
| GAAAGCGTTTGGTCGAGCCT+GGG | 0.594818 | 3_3:-70774510 | None:intergenic |
| GTTGGCTAATTTATATAACC+GGG | 0.595156 | 3_3:-70776579 | None:intergenic |
| CAGTAAAGGCTAAGACCTGA+AGG | 0.597130 | 3_3:-70778506 | None:intergenic |
| CCGCTAAACAGAATAACGAT+TGG | 0.597337 | 3_3:+70774710 | Msa0469070:CDS |
| AAAACGGAAGTGGTATCTCA+TGG | 0.597378 | 3_3:+70777172 | Msa0469070:CDS |
| ACTAACTTGTCACCAGGTCG+TGG | 0.600837 | 3_3:-70778810 | None:intergenic |
| ACCTGCTAGAGGATTAATGT+TGG | 0.604571 | 3_3:-70776597 | None:intergenic |
| CCAGCAAAACAGGCAAGACA+AGG | 0.604665 | 3_3:-70777754 | None:intergenic |
| AGTGTAACAGAACTTTACAT+TGG | 0.605731 | 3_3:+70780159 | Msa0469070:three_prime_UTR |
| AGATGCTGAATTCGTTCTCA+GGG | 0.605992 | 3_3:+70774594 | Msa0469070:CDS |
| AATAACCAATCACTAATGGA+AGG | 0.606695 | 3_3:-70778469 | None:intergenic |
| GCTCTGCTCCGGTTTACGAA+CGG | 0.607029 | 3_3:-70774451 | None:intergenic |
| TTAACCAGCCTCAAATCGAA+TGG | 0.607575 | 3_3:-70779802 | None:intergenic |
| AACAGAGCCGCCATTATTTG+GGG | 0.610215 | 3_3:-70774400 | None:intergenic |
| GTATCTGGCCATCCAAGGGG+AGG | 0.615968 | 3_3:-70777722 | None:intergenic |
| ATCGTTATTCTGTTTAGCGG+CGG | 0.616391 | 3_3:-70774707 | None:intergenic |
| GGTAATAGTAAGGACTTGGA+GGG | 0.617132 | 3_3:+70779119 | Msa0469070:CDS |
| GTCCAACTACAATTGCAGCT+CGG | 0.622003 | 3_3:+70777148 | Msa0469070:CDS |
| TCCAGTCACAGCATATACAT+TGG | 0.622993 | 3_3:-70780076 | None:intergenic |
| TTGCAAAGATCGCATAGCCA+TGG | 0.627975 | 3_3:-70775943 | None:intergenic |
| ACATCAGAAGGACCACGACC+TGG | 0.630719 | 3_3:+70778798 | Msa0469070:CDS |
| TGTAAAGAAAACCCTCCGCT+CGG | 0.630872 | 3_3:-70774627 | None:intergenic |
| ATAATCACTAACTTGTCACC+AGG | 0.631240 | 3_3:-70778816 | None:intergenic |
| AACGGAGAAGAGAGTATAGT+CGG | 0.633879 | 3_3:-70774433 | None:intergenic |
| GGAATTGTTTAACCGAGCGG+AGG | 0.635894 | 3_3:+70774615 | Msa0469070:CDS |
| GCGTTGTAAGTTGTAGAAAG+CGG | 0.640043 | 3_3:-70774322 | None:intergenic |
| AAGAAGGTACACGGAAATGG+AGG | 0.642030 | 3_3:-70774281 | None:intergenic |
| ATATGGCTTCAAAAGTTAGG+AGG | 0.642305 | 3_3:+70778648 | Msa0469070:CDS |
| TATCTGGCCATCCAAGGGGA+GGG | 0.645587 | 3_3:-70777721 | None:intergenic |
| GTAGTTGGACCAGAAAGAGA+AGG | 0.646105 | 3_3:-70777135 | None:intergenic |
| CAGGGAATTGTTTAACCGAG+CGG | 0.646542 | 3_3:+70774612 | Msa0469070:CDS |
| TTCTCAGGTAGAATCTGCCA+TGG | 0.649889 | 3_3:+70775926 | Msa0469070:intron |
| TCCAAAAGAAGCCTTCATTG+AGG | 0.654506 | 3_3:-70777110 | None:intergenic |
| CACGAACAAATAGTTGAAGG+AGG | 0.656063 | 3_3:+70779014 | Msa0469070:CDS |
| AAGCGGAGTGAACAGAGTGG+TGG | 0.661092 | 3_3:-70774305 | None:intergenic |
| ATATAGTTAGAGAGACAAAG+GGG | 0.661808 | 3_3:-70774227 | None:intergenic |
| ATTTCAACCCCAAATAATGG+CGG | 0.666629 | 3_3:+70774393 | Msa0469070:intron |
| TTCTCTTAACAACACCAGTG+TGG | 0.669853 | 3_3:+70776938 | Msa0469070:CDS |
| GAGTTCTCAAGTCTTAAACA+AGG | 0.684546 | 3_3:+70778445 | Msa0469070:CDS |
| ATGACATGGATACCTGCTAG+AGG | 0.694876 | 3_3:-70776608 | None:intergenic |
| TATCCAGAAACAGTATGCCG+GGG | 0.697274 | 3_3:+70775980 | Msa0469070:CDS |
| AGTGGTGGAAAGAAGGTACA+CGG | 0.711278 | 3_3:-70774290 | None:intergenic |
| AATGTATCTGGCCATCCAAG+GGG | 0.721790 | 3_3:-70777725 | None:intergenic |
| GTGTTGTTAAGAGAACAGGC+AGG | 0.747090 | 3_3:-70776930 | None:intergenic |
| AGAAAGCGGAGTGAACAGAG+TGG | 0.795156 | 3_3:-70774308 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTGTCTAATAATAAATAA+AGG | + | chr3_3:70777083-70777102 | Msa0469070:intron | 10.0% |
| !! | TTTGTCTAATAATAAATAAA+GGG | + | chr3_3:70777084-70777103 | Msa0469070:intron | 10.0% |
| !! | AAATAAAATGATTATTGAAA+AGG | - | chr3_3:70777439-70777458 | None:intergenic | 10.0% |
| !! | ACAAAAAATTAAAATAACAA+TGG | - | chr3_3:70777599-70777618 | None:intergenic | 10.0% |
| !! | TTATGATTAAATGATATAAA+GGG | + | chr3_3:70779457-70779476 | Msa0469070:intron | 10.0% |
| !!! | ATCTAAACCTATTTTATATA+TGG | - | chr3_3:70775107-70775126 | None:intergenic | 15.0% |
| !!! | ATGAAATTGACTTTTTTTTA+TGG | - | chr3_3:70776361-70776380 | None:intergenic | 15.0% |
| !!! | TCTTACATTTTCTAATTTTT+AGG | + | chr3_3:70777370-70777389 | Msa0469070:intron | 15.0% |
| !!! | TGATTTTTTTTTTTCATTTC+AGG | + | chr3_3:70777691-70777710 | Msa0469070:intron | 15.0% |
| !! | ATTAATTCCTATAGAAAAAT+GGG | - | chr3_3:70778307-70778326 | None:intergenic | 15.0% |
| !! | AGTTAGTGATTATAATTATA+AGG | + | chr3_3:70778826-70778845 | Msa0469070:intron | 15.0% |
| !! | GTTATGATTAAATGATATAA+AGG | + | chr3_3:70779456-70779475 | Msa0469070:intron | 15.0% |
| !!! | ATTTTCATTTATTACTTCTT+TGG | + | chr3_3:70779507-70779526 | Msa0469070:intron | 15.0% |
| !!! | TTTTCATTTATTACTTCTTT+GGG | + | chr3_3:70779508-70779527 | Msa0469070:intron | 15.0% |
| !! | ATCATAAGAAAATACTATAA+AGG | - | chr3_3:70780185-70780204 | None:intergenic | 15.0% |
| !!! | TAGTATTTTCTTATGATATT+TGG | + | chr3_3:70780188-70780207 | Msa0469070:three_prime_UTR | 15.0% |
| !! | AATTATAATCATACTAGAGA+GGG | + | chr3_3:70774862-70774881 | Msa0469070:intron | 20.0% |
| !!! | AACTTAACAATTTAAAACCA+TGG | - | chr3_3:70774990-70775009 | None:intergenic | 20.0% |
| !!! | TAAGTTTTTTTGTTGTTGTT+TGG | + | chr3_3:70775173-70775192 | Msa0469070:intron | 20.0% |
| !!! | AAGAATCCTATTTTTCATAT+AGG | + | chr3_3:70775448-70775467 | Msa0469070:intron | 20.0% |
| !!! | AAATGTCTTTTAAATGTCAA+AGG | - | chr3_3:70775854-70775873 | None:intergenic | 20.0% |
| !! | AAGTTTATCTAACTAAATCA+TGG | - | chr3_3:70775895-70775914 | None:intergenic | 20.0% |
| !!! | TCAAAAAGAACATGTTTTAT+TGG | - | chr3_3:70776045-70776064 | None:intergenic | 20.0% |
| !!! | TTGACTTTTTTTTATGGAAA+AGG | - | chr3_3:70776355-70776374 | None:intergenic | 20.0% |
| !!! | TTATATATTTCTATCGTCAA+TGG | + | chr3_3:70777049-70777068 | Msa0469070:intron | 20.0% |
| !! | ACAATAATCTAGATTAATGA+AGG | - | chr3_3:70777567-70777586 | None:intergenic | 20.0% |
| !!! | TAATTTTTTGTTCACATTGT+TGG | + | chr3_3:70777608-70777627 | Msa0469070:intron | 20.0% |
| !!! | TTTTTTTTTTCATTTCAGGA+TGG | + | chr3_3:70777695-70777714 | Msa0469070:intron | 20.0% |
| !! | TATATAAATTAACCCTAACT+AGG | + | chr3_3:70777981-70778000 | Msa0469070:intron | 20.0% |
| !! | GTTATGGTATGTTATTAATA+GGG | - | chr3_3:70778056-70778075 | None:intergenic | 20.0% |
| !! | AGTTATGGTATGTTATTAAT+AGG | - | chr3_3:70778057-70778076 | None:intergenic | 20.0% |
| !!! | GATATGATTTTTTTTCCTTT+TGG | + | chr3_3:70778219-70778238 | Msa0469070:intron | 20.0% |
| !! | CATTAATTCCTATAGAAAAA+TGG | - | chr3_3:70778308-70778327 | None:intergenic | 20.0% |
| !! | AGTAATAAATGGTAATAGTA+AGG | + | chr3_3:70779109-70779128 | Msa0469070:CDS | 20.0% |
| !! | TTTCATTTATTACTTCTTTG+GGG | + | chr3_3:70779509-70779528 | Msa0469070:intron | 20.0% |
| !! | CTATTTGTATTACTAAATCA+TGG | - | chr3_3:70779770-70779789 | None:intergenic | 20.0% |
| !!! | TTCTGGAATTACCAATTATA+TGG | + | chr3_3:70774735-70774754 | Msa0469070:CDS | 25.0% |
| ! | GAGAATAGTTTCCATATAAT+TGG | - | chr3_3:70774749-70774768 | None:intergenic | 25.0% |
| ! | TTATATGGAAACTATTCTCA+AGG | + | chr3_3:70774750-70774769 | Msa0469070:CDS | 25.0% |
| ! | GAATTATAATCATACTAGAG+AGG | + | chr3_3:70774861-70774880 | Msa0469070:intron | 25.0% |
| ! | ACAAGCACCATATATAAAAT+AGG | + | chr3_3:70775097-70775116 | Msa0469070:intron | 25.0% |
| ! | AAACCTATAAAATGTACCAT+CGG | + | chr3_3:70775341-70775360 | Msa0469070:intron | 25.0% |
| ! | GAAACACCTATATGAAAAAT+AGG | - | chr3_3:70775457-70775476 | None:intergenic | 25.0% |
| ! | GTAAATTACATAACTTCACA+TGG | + | chr3_3:70775541-70775560 | Msa0469070:intron | 25.0% |
| !!! | AGTTTTGAAAATGATCCATA+CGG | + | chr3_3:70775776-70775795 | Msa0469070:intron | 25.0% |
| !! | TTTTGATACTCCTGAATTTA+AGG | + | chr3_3:70775808-70775827 | Msa0469070:intron | 25.0% |
| !! | CATTTTACATCCTTAAATTC+AGG | - | chr3_3:70775821-70775840 | None:intergenic | 25.0% |
| ! | AAAAATCAGTTTACATTACC+AGG | - | chr3_3:70776075-70776094 | None:intergenic | 25.0% |
| !! | GTTTGAAATGATAAAAGAGA+AGG | + | chr3_3:70776190-70776209 | Msa0469070:intron | 25.0% |
| ! | TTGAATATGGTAGTATTTGT+GGG | + | chr3_3:70776267-70776286 | Msa0469070:intron | 25.0% |
| !! | GACCATTTACTCTTATTTAA+TGG | + | chr3_3:70776329-70776348 | Msa0469070:intron | 25.0% |
| !!! | ATCGAATAAAAGCATTTTTG+AGG | + | chr3_3:70776432-70776451 | Msa0469070:intron | 25.0% |
| ! | AAAAAAGAAGGAAAAAGCTT+CGG | - | chr3_3:70776500-70776519 | None:intergenic | 25.0% |
| !! | TGTTGGCTAATTTATATAAC+CGG | - | chr3_3:70776583-70776602 | None:intergenic | 25.0% |
| ! | ATAATTGTCACTATTGCAAA+GGG | + | chr3_3:70776629-70776648 | Msa0469070:intron | 25.0% |
| ! | ACACACACAAAAGATTATTA+TGG | + | chr3_3:70776790-70776809 | Msa0469070:intron | 25.0% |
| ! | ACAAAAGATTATTATGGCTT+GGG | + | chr3_3:70776796-70776815 | Msa0469070:intron | 25.0% |
| ! | GCAATATTAATGCTTTATAC+AGG | - | chr3_3:70776852-70776871 | None:intergenic | 25.0% |
| ! | TTTCTATTAGATAGTTACCT+GGG | + | chr3_3:70777022-70777041 | Msa0469070:intron | 25.0% |
| !!! | GTAATTTTACTTGCTAATTG+AGG | - | chr3_3:70777220-70777239 | None:intergenic | 25.0% |
| ! | TGTTGCATGTACAATTAAAT+TGG | + | chr3_3:70777829-70777848 | Msa0469070:intron | 25.0% |
| !! | ACTGATATTATCTAGTTTAC+AGG | + | chr3_3:70777923-70777942 | Msa0469070:intron | 25.0% |
| !!! | AGGAAGTAATGTTTTTATGT+GGG | - | chr3_3:70778081-70778100 | None:intergenic | 25.0% |
| !!! | TAGGAAGTAATGTTTTTATG+TGG | - | chr3_3:70778082-70778101 | None:intergenic | 25.0% |
| ! | CTAAAGCTATAACTAAACAT+AGG | - | chr3_3:70778160-70778179 | None:intergenic | 25.0% |
| ! | ACTATTTGTGCTAATTTACT+TGG | + | chr3_3:70778331-70778350 | Msa0469070:intron | 25.0% |
| !!! | TTATACTTTTTAAGTTGTGC+AGG | + | chr3_3:70778592-70778611 | Msa0469070:intron | 25.0% |
| ! | ATAGCATTATGAAATAAGTG+TGG | - | chr3_3:70778854-70778873 | None:intergenic | 25.0% |
| ! | TTGCAGATTTAAGCAATTAA+TGG | + | chr3_3:70778914-70778933 | Msa0469070:intron | 25.0% |
| ! | TTTATTACTCCAGATATAGA+TGG | - | chr3_3:70779098-70779117 | None:intergenic | 25.0% |
| !! | TCTATATCTGGAGTAATAAA+TGG | + | chr3_3:70779098-70779117 | Msa0469070:CDS | 25.0% |
| !! | AAATGCTATGTTTCTGATAT+TGG | + | chr3_3:70779357-70779376 | Msa0469070:intron | 25.0% |
| !! | AATGCTATGTTTCTGATATT+GGG | + | chr3_3:70779358-70779377 | Msa0469070:intron | 25.0% |
| ! | TTCATTTATTACTTCTTTGG+GGG | + | chr3_3:70779510-70779529 | Msa0469070:intron | 25.0% |
| !!! | GAAACATTCTTTTTTCCATT+AGG | + | chr3_3:70779540-70779559 | Msa0469070:intron | 25.0% |
| !!! | TTCTTTTTTCCATTAGGATA+AGG | + | chr3_3:70779546-70779565 | Msa0469070:intron | 25.0% |
| !! | TGGGTTTAATTTAGATTTGA+TGG | + | chr3_3:70779898-70779917 | Msa0469070:three_prime_UTR | 25.0% |
| ! | CACCAACTAGTTAATAAATA+AGG | + | chr3_3:70779975-70779994 | Msa0469070:three_prime_UTR | 25.0% |
| !! | GTCCTTATTTATTAACTAGT+TGG | - | chr3_3:70779980-70779999 | None:intergenic | 25.0% |
| ! | CAATAATGATGAGTTTATGA+CGG | + | chr3_3:70780220-70780239 | Msa0469070:three_prime_UTR | 25.0% |
| ATATAGTTAGAGAGACAAAG+GGG | - | chr3_3:70774230-70774249 | None:intergenic | 30.0% | |
| GATATAGTTAGAGAGACAAA+GGG | - | chr3_3:70774231-70774250 | None:intergenic | 30.0% | |
| TGATATAGTTAGAGAGACAA+AGG | - | chr3_3:70774232-70774251 | None:intergenic | 30.0% | |
| AATCGAACATACAAGTATGA+TGG | - | chr3_3:70774255-70774274 | None:intergenic | 30.0% | |
| TTCATTTCAACCCCAAATAA+TGG | + | chr3_3:70774390-70774409 | Msa0469070:intron | 30.0% | |
| ! | TTGTAGCTTTCTTCATTTTG+AGG | + | chr3_3:70774921-70774940 | Msa0469070:intron | 30.0% |
| TGATATTTCTCAAGTCACAA+GGG | - | chr3_3:70775078-70775097 | None:intergenic | 30.0% | |
| !! | GATTTTAGTCTCTGCAATTA+TGG | + | chr3_3:70775129-70775148 | Msa0469070:intron | 30.0% |
| CAACAAACTCTATATTTGCA+GGG | + | chr3_3:70775303-70775322 | Msa0469070:intron | 30.0% | |
| ! | AAACCGATGGTACATTTTAT+AGG | - | chr3_3:70775347-70775366 | None:intergenic | 30.0% |
| ATGACACATAGAAACAGAAA+GGG | - | chr3_3:70775370-70775389 | None:intergenic | 30.0% | |
| ATAGTCAAGAGTAATTCTGA+AGG | + | chr3_3:70775584-70775603 | Msa0469070:intron | 30.0% | |
| TAGTCAAGAGTAATTCTGAA+GGG | + | chr3_3:70775585-70775604 | Msa0469070:intron | 30.0% | |
| !!! | GGAAGTATTTTATCGTTTTC+AGG | + | chr3_3:70775606-70775625 | Msa0469070:intron | 30.0% |
| !!! | GTTTTGAAAATGATCCATAC+GGG | + | chr3_3:70775777-70775796 | Msa0469070:intron | 30.0% |
| ! | GTTCTTTTTGAACTATTTCC+TGG | + | chr3_3:70776054-70776073 | Msa0469070:intron | 30.0% |
| !!! | ATTTTGGAATGCTGAGAAAT+GGG | + | chr3_3:70776131-70776150 | Msa0469070:intron | 30.0% |
| CAAATACTACCATATTCAAG+AGG | - | chr3_3:70776266-70776285 | None:intergenic | 30.0% | |
| CTTGAATATGGTAGTATTTG+TGG | + | chr3_3:70776266-70776285 | Msa0469070:intron | 30.0% | |
| GGCCATTAAATAAGAGTAAA+TGG | - | chr3_3:70776334-70776353 | None:intergenic | 30.0% | |
| CAAAATGCTAACATCATGTT+TGG | - | chr3_3:70776461-70776480 | None:intergenic | 30.0% | |
| TCTTGTCAGTTGAAAAAAGA+AGG | - | chr3_3:70776512-70776531 | None:intergenic | 30.0% | |
| GTTGGCTAATTTATATAACC+GGG | - | chr3_3:70776582-70776601 | None:intergenic | 30.0% | |
| CAATAGTGACAATTATGACA+TGG | - | chr3_3:70776625-70776644 | None:intergenic | 30.0% | |
| CATAATTGTCACTATTGCAA+AGG | + | chr3_3:70776628-70776647 | Msa0469070:intron | 30.0% | |
| TAATTGTCACTATTGCAAAG+GGG | + | chr3_3:70776630-70776649 | Msa0469070:intron | 30.0% | |
| AAACAGTACAAGCAAAATTC+TGG | - | chr3_3:70776750-70776769 | None:intergenic | 30.0% | |
| CACAAAAGATTATTATGGCT+TGG | + | chr3_3:70776795-70776814 | Msa0469070:intron | 30.0% | |
| ATTAATGCTTTATACAGGAG+TGG | - | chr3_3:70776847-70776866 | None:intergenic | 30.0% | |
| GTTTCTATTAGATAGTTACC+TGG | + | chr3_3:70777021-70777040 | Msa0469070:intron | 30.0% | |
| TAGAAATATATAAACAGCCC+AGG | - | chr3_3:70777042-70777061 | None:intergenic | 30.0% | |
| ! | ATTGAGGTATTTACCACAAA+AGG | - | chr3_3:70777204-70777223 | None:intergenic | 30.0% |
| ! | GTAAGAATTATTTCTTGACG+AGG | + | chr3_3:70777270-70777289 | Msa0469070:intron | 30.0% |
| !!! | TTTTTAGGTGCATTTTTGCT+CGG | + | chr3_3:70777385-70777404 | Msa0469070:intron | 30.0% |
| GAAAACTGAAGAACTTAAGT+GGG | - | chr3_3:70777496-70777515 | None:intergenic | 30.0% | |
| AGAAAACTGAAGAACTTAAG+TGG | - | chr3_3:70777497-70777516 | None:intergenic | 30.0% | |
| AGGTGAATCATGTAAGTAAT+AGG | - | chr3_3:70777547-70777566 | None:intergenic | 30.0% | |
| !! | TTCACATTGTTGGTAATTTC+TGG | + | chr3_3:70777618-70777637 | Msa0469070:intron | 30.0% |
| TGCATGTACAATTAAATTGG+AGG | + | chr3_3:70777832-70777851 | Msa0469070:intron | 30.0% | |
| ! | GTTAGTGTTGAATTCAAATC+TGG | - | chr3_3:70777949-70777968 | None:intergenic | 30.0% |
| ! | TCTGTGTTTGTTGATAAAGA+AGG | - | chr3_3:70778012-70778031 | None:intergenic | 30.0% |
| !! | TGTTTTTATGTGGGTAGTTA+TGG | - | chr3_3:70778072-70778091 | None:intergenic | 30.0% |
| GTGCTAATTTACTTGGTATT+TGG | + | chr3_3:70778338-70778357 | Msa0469070:intron | 30.0% | |
| TGGAAAATTATGAGTAGTTC+AGG | - | chr3_3:70778397-70778416 | None:intergenic | 30.0% | |
| ! | CTCATAATTTTCCATGATTC+AGG | + | chr3_3:70778403-70778422 | Msa0469070:intron | 30.0% |
| AATAACCAATCACTAATGGA+AGG | - | chr3_3:70778472-70778491 | None:intergenic | 30.0% | |
| GCAAAATAACCAATCACTAA+TGG | - | chr3_3:70778476-70778495 | None:intergenic | 30.0% | |
| CAAATATGGCTTCAAAAGTT+AGG | + | chr3_3:70778645-70778664 | Msa0469070:CDS | 30.0% | |
| !! | TCTAGCTTCTTCAATTTTTG+TGG | - | chr3_3:70778763-70778782 | None:intergenic | 30.0% |
| GATTCAAAATTGACATCAGA+AGG | + | chr3_3:70778786-70778805 | Msa0469070:CDS | 30.0% | |
| AATCACGAACAAATAGTTGA+AGG | + | chr3_3:70779011-70779030 | Msa0469070:CDS | 30.0% | |
| TAACTAAGTCGTTTACAACT+TGG | - | chr3_3:70779043-70779062 | None:intergenic | 30.0% | |
| AGTTAAAAATTCCCAATCTG+TGG | + | chr3_3:70779058-70779077 | Msa0469070:CDS | 30.0% | |
| AAATGGTAATAGTAAGGACT+TGG | + | chr3_3:70779115-70779134 | Msa0469070:CDS | 30.0% | |
| TTGCATATATAACATGCTTG+CGG | + | chr3_3:70779236-70779255 | Msa0469070:intron | 30.0% | |
| TTTAATCATAACTCAGCAAG+CGG | - | chr3_3:70779448-70779467 | None:intergenic | 30.0% | |
| CATAGTTATCCTTATCCTAA+TGG | - | chr3_3:70779558-70779577 | None:intergenic | 30.0% | |
| AAATTCAGCTGCTGTATAAT+TGG | + | chr3_3:70779721-70779740 | Msa0469070:intron | 30.0% | |
| CATTCATTCCATCATTTATG+TGG | - | chr3_3:70779840-70779859 | None:intergenic | 30.0% | |
| AGATTTGAGGATTTCTACAT+TGG | + | chr3_3:70779860-70779879 | Msa0469070:three_prime_UTR | 30.0% | |
| AAACACATTATGGAAGTTCT+CGG | - | chr3_3:70780112-70780131 | None:intergenic | 30.0% | |
| ! | TTACATGCCTATACTTTTGA+GGG | - | chr3_3:70780140-70780159 | None:intergenic | 30.0% |
| AGTGTAACAGAACTTTACAT+TGG | + | chr3_3:70780159-70780178 | Msa0469070:three_prime_UTR | 30.0% | |
| !!! | GCTTGGTTTTTTCATTGAAC+CGG | + | chr3_3:70774367-70774386 | Msa0469070:intron | 35.0% |
| ! | TATTTGGGGTTGAAATGAAC+CGG | - | chr3_3:70774389-70774408 | None:intergenic | 35.0% |
| ATTTCAACCCCAAATAATGG+CGG | + | chr3_3:70774393-70774412 | Msa0469070:intron | 35.0% | |
| CCAATCGTTATTCTGTTTAG+CGG | - | chr3_3:70774713-70774732 | None:intergenic | 35.0% | |
| !!! | CAGAATAACGATTGGTTTTC+TGG | + | chr3_3:70774718-70774737 | Msa0469070:CDS | 35.0% |
| !! | TAGCTTTCTTCATTTTGAGG+TGG | + | chr3_3:70774924-70774943 | Msa0469070:intron | 35.0% |
| !!! | TTTCTTCATTTTGAGGTGGT+AGG | + | chr3_3:70774928-70774947 | Msa0469070:intron | 35.0% |
| CACATTTCACAGCAGATAAA+AGG | - | chr3_3:70775018-70775037 | None:intergenic | 35.0% | |
| TCACAAGGGGTTTAAAAATG+TGG | - | chr3_3:70775064-70775083 | None:intergenic | 35.0% | |
| GATATTTCTCAAGTCACAAG+GGG | - | chr3_3:70775077-70775096 | None:intergenic | 35.0% | |
| GTGATATTTCTCAAGTCACA+AGG | - | chr3_3:70775079-70775098 | None:intergenic | 35.0% | |
| GCAACAAACTCTATATTTGC+AGG | + | chr3_3:70775302-70775321 | Msa0469070:intron | 35.0% | |
| CATGACACATAGAAACAGAA+AGG | - | chr3_3:70775371-70775390 | None:intergenic | 35.0% | |
| !! | CTTTCTGTTTCTATGTGTCA+TGG | + | chr3_3:70775369-70775388 | Msa0469070:intron | 35.0% |
| !! | CACATGGTTCTATTTCTACT+TGG | + | chr3_3:70775557-70775576 | Msa0469070:intron | 35.0% |
| !!! | TTATCGTTTTCAGGTACTCA+AGG | + | chr3_3:70775615-70775634 | Msa0469070:intron | 35.0% |
| ATCGCAAAACCATAAGCATA+CGG | - | chr3_3:70775664-70775683 | None:intergenic | 35.0% | |
| ! | TTTTCTTGTCAACGGAAATG+TGG | - | chr3_3:70775716-70775735 | None:intergenic | 35.0% |
| ATTTCCGTTGACAAGAAAAC+AGG | + | chr3_3:70775717-70775736 | Msa0469070:CDS | 35.0% | |
| ! | CAAACCTGTTTTCTTGTCAA+CGG | - | chr3_3:70775724-70775743 | None:intergenic | 35.0% |
| !!! | GAAAACAGGTTTGTCGTTTT+TGG | + | chr3_3:70775731-70775750 | Msa0469070:intron | 35.0% |
| !! | TTCAGGAGTATCAAAAGAAC+AGG | - | chr3_3:70775804-70775823 | None:intergenic | 35.0% |
| CATATAAAATACCTGATCCC+CGG | - | chr3_3:70776000-70776019 | None:intergenic | 35.0% | |
| !! | ATAAGAGCGTGTATGGATTT+TGG | + | chr3_3:70776115-70776134 | Msa0469070:intron | 35.0% |
| !!! | GATTTTGGAATGCTGAGAAA+TGG | + | chr3_3:70776130-70776149 | Msa0469070:intron | 35.0% |
| GTCACAAATCCTCTTGAATA+TGG | + | chr3_3:70776254-70776273 | Msa0469070:intron | 35.0% | |
| AAGGAAAAAGCTTCGGTAAA+AGG | - | chr3_3:70776493-70776512 | None:intergenic | 35.0% | |
| CTTATGTATTGTCTTCTTGC+AGG | + | chr3_3:70776535-70776554 | Msa0469070:intron | 35.0% | |
| GTAGTCATAGGTATTTCCTA+TGG | + | chr3_3:70776662-70776681 | Msa0469070:intron | 35.0% | |
| ! | AGGTATTTCCTATGGCTTTT+AGG | + | chr3_3:70776670-70776689 | Msa0469070:intron | 35.0% |
| TGTAATCTGAAAACTGAGGA+AGG | - | chr3_3:70776702-70776721 | None:intergenic | 35.0% | |
| GACTTGTAATCTGAAAACTG+AGG | - | chr3_3:70776706-70776725 | None:intergenic | 35.0% | |
| ! | CAGTTTTCAGATTACAAGTC+TGG | + | chr3_3:70776706-70776725 | Msa0469070:intron | 35.0% |
| ! | AAGATTATTATGGCTTGGGT+AGG | + | chr3_3:70776800-70776819 | Msa0469070:intron | 35.0% |
| ! | ATATCGAGCCTTTTCTAATG+TGG | + | chr3_3:70776969-70776988 | Msa0469070:CDS | 35.0% |
| ! | TTTTGGATACCTTCTCTTTC+TGG | + | chr3_3:70777126-70777145 | Msa0469070:CDS | 35.0% |
| CAATTGTGAGGACTTATTCA+AGG | - | chr3_3:70777520-70777539 | None:intergenic | 35.0% | |
| CTTGAATAAGTCCTCACAAT+TGG | + | chr3_3:70777518-70777537 | Msa0469070:intron | 35.0% | |
| TCTAGGTGGATGTAAATTTG+AGG | + | chr3_3:70777646-70777665 | Msa0469070:intron | 35.0% | |
| CAATTAAATTGGAGGCTTCT+TGG | + | chr3_3:70777840-70777859 | Msa0469070:intron | 35.0% | |
| TTCAACACTAACAAACTGCT+CGG | + | chr3_3:70777957-70777976 | Msa0469070:intron | 35.0% | |
| AAGAAGGAAACTCCTAGTTA+GGG | - | chr3_3:70777996-70778015 | None:intergenic | 35.0% | |
| AAAGAAGGAAACTCCTAGTT+AGG | - | chr3_3:70777997-70778016 | None:intergenic | 35.0% | |
| ! | TTTTTCCTTTTGGTATAGCC+AGG | + | chr3_3:70778229-70778248 | Msa0469070:intron | 35.0% |
| !! | CATGTGACCCATTTTTCTAT+AGG | + | chr3_3:70778297-70778316 | Msa0469070:intron | 35.0% |
| ACTTGAGAACTCTTCACATT+AGG | - | chr3_3:70778437-70778456 | None:intergenic | 35.0% | |
| GAGTTCTCAAGTCTTAAACA+AGG | + | chr3_3:70778445-70778464 | Msa0469070:CDS | 35.0% | |
| ACACATATAAGACCATTGGA+AGG | - | chr3_3:70778548-70778567 | None:intergenic | 35.0% | |
| GCTTACACATATAAGACCAT+TGG | - | chr3_3:70778552-70778571 | None:intergenic | 35.0% | |
| TGAGCACTTTACAGCAAATA+TGG | + | chr3_3:70778631-70778650 | Msa0469070:CDS | 35.0% | |
| ATATGGCTTCAAAAGTTAGG+AGG | + | chr3_3:70778648-70778667 | Msa0469070:CDS | 35.0% | |
| TCATCAAGAACTTGTCTCAA+AGG | - | chr3_3:70778684-70778703 | None:intergenic | 35.0% | |
| GAAAAATGTAGACCTAATGC+AGG | + | chr3_3:70778710-70778729 | Msa0469070:CDS | 35.0% | |
| ! | ATAATCACTAACTTGTCACC+AGG | - | chr3_3:70778819-70778838 | None:intergenic | 35.0% |
| AAGACGAACACAATTACAAC+AGG | - | chr3_3:70778890-70778909 | None:intergenic | 35.0% | |
| TAAGCAATTAATGGAGCAAG+AGG | + | chr3_3:70778923-70778942 | Msa0469070:CDS | 35.0% | |
| GATACTGATCCATCTATATC+TGG | + | chr3_3:70779086-70779105 | Msa0469070:CDS | 35.0% | |
| TCTGATACTGCAAATGATGA+AGG | + | chr3_3:70779164-70779183 | Msa0469070:CDS | 35.0% | |
| CAAGGAAACACTGATATCAA+AGG | - | chr3_3:70779317-70779336 | None:intergenic | 35.0% | |
| CTTTGATATCAGTGTTTCCT+TGG | + | chr3_3:70779315-70779334 | Msa0469070:intron | 35.0% | |
| CTACATTGCCACATAAATGA+TGG | + | chr3_3:70779829-70779848 | Msa0469070:three_prime_UTR | 35.0% | |
| GATGGAATGAATGAGATTTG+AGG | + | chr3_3:70779847-70779866 | Msa0469070:three_prime_UTR | 35.0% | |
| TATGACAAGCAGGCTATAAA+GGG | - | chr3_3:70780007-70780026 | None:intergenic | 35.0% | |
| ATATGACAAGCAGGCTATAA+AGG | - | chr3_3:70780008-70780027 | None:intergenic | 35.0% | |
| TACGATGGATCAATAAACTC+TGG | + | chr3_3:70780053-70780072 | Msa0469070:three_prime_UTR | 35.0% | |
| TTATGGAAGTTCTCGGATAA+TGG | - | chr3_3:70780105-70780124 | None:intergenic | 35.0% | |
| !! | TTTTCTGCCCTCAAAAGTAT+AGG | + | chr3_3:70780130-70780149 | Msa0469070:three_prime_UTR | 35.0% |
| ! | CTTACATGCCTATACTTTTG+AGG | - | chr3_3:70780141-70780160 | None:intergenic | 35.0% |
| ACTCATCATTATTGCAAGTG+AGG | - | chr3_3:70780214-70780233 | None:intergenic | 35.0% | |
| GCGTTGTAAGTTGTAGAAAG+CGG | - | chr3_3:70774325-70774344 | None:intergenic | 40.0% | |
| TAACAGAGCCGCCATTATTT+GGG | - | chr3_3:70774404-70774423 | None:intergenic | 40.0% | |
| ! | AACGGAGAAGAGAGTATAGT+CGG | - | chr3_3:70774436-70774455 | None:intergenic | 40.0% |
| AGAACGAATTCAGCATCTTC+CGG | - | chr3_3:70774592-70774611 | None:intergenic | 40.0% | |
| AAGATGCTGAATTCGTTCTC+AGG | + | chr3_3:70774593-70774612 | Msa0469070:CDS | 40.0% | |
| AGATGCTGAATTCGTTCTCA+GGG | + | chr3_3:70774594-70774613 | Msa0469070:CDS | 40.0% | |
| ATCGTTATTCTGTTTAGCGG+CGG | - | chr3_3:70774710-70774729 | None:intergenic | 40.0% | |
| CCGCTAAACAGAATAACGAT+TGG | + | chr3_3:70774710-70774729 | Msa0469070:CDS | 40.0% | |
| GGAAACTATTCTCAAGGTCT+TGG | + | chr3_3:70774756-70774775 | Msa0469070:intron | 40.0% | |
| !!! | TTCATTTTGAGGTGGTAGGT+AGG | + | chr3_3:70774932-70774951 | Msa0469070:intron | 40.0% |
| !!! | TCATTTTGAGGTGGTAGGTA+GGG | + | chr3_3:70774933-70774952 | Msa0469070:intron | 40.0% |
| !!! | GTAGGTAGGGTTTTGGTTAA+CGG | + | chr3_3:70774946-70774965 | Msa0469070:intron | 40.0% |
| ! | GCGACATGGTGTGATTTTAT+TGG | + | chr3_3:70775254-70775273 | Msa0469070:intron | 40.0% |
| ! | ACTTTTCTGTGACTGTTCTC+AGG | + | chr3_3:70775911-70775930 | Msa0469070:intron | 40.0% |
| ATCTTTGCAACCTCAAGTGA+AGG | + | chr3_3:70775956-70775975 | Msa0469070:CDS | 40.0% | |
| ! | TACCATCATAAGAGCGTGTA+TGG | + | chr3_3:70776108-70776127 | Msa0469070:intron | 40.0% |
| ATCCATACACGCTCTTATGA+TGG | - | chr3_3:70776113-70776132 | None:intergenic | 40.0% | |
| GAATGCTGAGAAATGGGATT+TGG | + | chr3_3:70776137-70776156 | Msa0469070:intron | 40.0% | |
| GAATTCAACTTGAAACTGCC+CGG | + | chr3_3:70776561-70776580 | Msa0469070:CDS | 40.0% | |
| ACCTGCTAGAGGATTAATGT+TGG | - | chr3_3:70776600-70776619 | None:intergenic | 40.0% | |
| !!! | TTCCTATGGCTTTTAGGATG+TGG | + | chr3_3:70776676-70776695 | Msa0469070:intron | 40.0% |
| AATCACTCTTCATTCTTCCC+AGG | + | chr3_3:70776904-70776923 | Msa0469070:intron | 40.0% | |
| !! | ACTGGTGTTGTTAAGAGAAC+AGG | - | chr3_3:70776937-70776956 | None:intergenic | 40.0% |
| TTCTCTTAACAACACCAGTG+TGG | + | chr3_3:70776938-70776957 | Msa0469070:CDS | 40.0% | |
| TTAACAACACCAGTGTGGAT+CGG | + | chr3_3:70776943-70776962 | Msa0469070:CDS | 40.0% | |
| CTCATCAGCCACATTAGAAA+AGG | - | chr3_3:70776980-70776999 | None:intergenic | 40.0% | |
| ! | CTTTTCTAATGTGGCTGATG+AGG | + | chr3_3:70776978-70776997 | Msa0469070:CDS | 40.0% |
| ATAAAGGGACTCCTCAATGA+AGG | + | chr3_3:70777099-70777118 | Msa0469070:intron | 40.0% | |
| ! | TCCTCAATGAAGGCTTCTTT+TGG | + | chr3_3:70777109-70777128 | Msa0469070:CDS | 40.0% |
| TCCAAAAGAAGCCTTCATTG+AGG | - | chr3_3:70777113-70777132 | None:intergenic | 40.0% | |
| AAAACGGAAGTGGTATCTCA+TGG | + | chr3_3:70777172-70777191 | Msa0469070:CDS | 40.0% | |
| !! | CTCATGGCTTTTTCCTTTTG+TGG | + | chr3_3:70777188-70777207 | Msa0469070:CDS | 40.0% |
| CATGCTGAAGTCGTATGAAA+TGG | + | chr3_3:70777304-70777323 | Msa0469070:intron | 40.0% | |
| GAATAAGTCCTCACAATTGG+AGG | + | chr3_3:70777521-70777540 | Msa0469070:intron | 40.0% | |
| !! | CATTGTTGGTAATTTCTGGC+AGG | + | chr3_3:70777622-70777641 | Msa0469070:intron | 40.0% |
| ACAAGGTAAGCCAATGTATC+TGG | - | chr3_3:70777740-70777759 | None:intergenic | 40.0% | |
| !! | GTGTTATTTCTTCAGTCCAC+AGG | - | chr3_3:70777891-70777910 | None:intergenic | 40.0% |
| ACAGATAACTGCCTATACTG+CGG | + | chr3_3:70778027-70778046 | Msa0469070:intron | 40.0% | |
| ACAGTCAACAAGGTTCAGAT+AGG | - | chr3_3:70778101-70778120 | None:intergenic | 40.0% | |
| AAACGCTTGTACAGTCAACA+AGG | - | chr3_3:70778111-70778130 | None:intergenic | 40.0% | |
| AAGGTCCTTCCATTAGTGAT+TGG | + | chr3_3:70778464-70778483 | Msa0469070:CDS | 40.0% | |
| TTTGCTCTTTCAGTTCCTTC+AGG | + | chr3_3:70778491-70778510 | Msa0469070:CDS | 40.0% | |
| TTACGTGTGCTTACCAGTAA+AGG | - | chr3_3:70778523-70778542 | None:intergenic | 40.0% | |
| ! | CTGACTTTTGAACCTGCATT+AGG | - | chr3_3:70778725-70778744 | None:intergenic | 40.0% |
| AGCAGAGAGAAGAAGAGAAA+AGG | + | chr3_3:70778958-70778977 | Msa0469070:CDS | 40.0% | |
| GAGAGAAGAAGAGAAAAGGA+AGG | + | chr3_3:70778962-70778981 | Msa0469070:CDS | 40.0% | |
| CACGAACAAATAGTTGAAGG+AGG | + | chr3_3:70779014-70779033 | Msa0469070:CDS | 40.0% | |
| AGTATCATCAGCCACAGATT+GGG | - | chr3_3:70779072-70779091 | None:intergenic | 40.0% | |
| TGGTAATAGTAAGGACTTGG+AGG | + | chr3_3:70779118-70779137 | Msa0469070:CDS | 40.0% | |
| GGTAATAGTAAGGACTTGGA+GGG | + | chr3_3:70779119-70779138 | Msa0469070:CDS | 40.0% | |
| ! | TAACATGCTTGCGGCAATTT+TGG | + | chr3_3:70779245-70779264 | Msa0469070:intron | 40.0% |
| ! | TTACTTCTTTGGGGGTAATG+AGG | + | chr3_3:70779518-70779537 | Msa0469070:intron | 40.0% |
| AATTCTCCCTCCAATTTCAC+AGG | + | chr3_3:70779598-70779617 | Msa0469070:intron | 40.0% | |
| TTGGTTCCTGTGAAATTGGA+GGG | - | chr3_3:70779607-70779626 | None:intergenic | 40.0% | |
| TCTCTTGGTTCCTGTGAAAT+TGG | - | chr3_3:70779611-70779630 | None:intergenic | 40.0% | |
| CTGGTTGACAATACTTCTCT+TGG | - | chr3_3:70779626-70779645 | None:intergenic | 40.0% | |
| TTGCTTGTTTGTAGTAGCTC+TGG | - | chr3_3:70779645-70779664 | None:intergenic | 40.0% | |
| ACTACAAACAAGCAAGCTCA+TGG | + | chr3_3:70779650-70779669 | Msa0469070:CDS | 40.0% | |
| AAACTCAGATAGCGTGTCAA+AGG | + | chr3_3:70779676-70779695 | Msa0469070:CDS | 40.0% | |
| TAACCAGCCTCAAATCGAAT+GGG | - | chr3_3:70779804-70779823 | None:intergenic | 40.0% | |
| TTAACCAGCCTCAAATCGAA+TGG | - | chr3_3:70779805-70779824 | None:intergenic | 40.0% | |
| TTGAGGATTTCTACATTGGC+CGG | + | chr3_3:70779864-70779883 | Msa0469070:three_prime_UTR | 40.0% | |
| ! | TAGCATCGAATATGACAAGC+AGG | - | chr3_3:70780017-70780036 | None:intergenic | 40.0% |
| !! | TTTTGTGTGTCGCTATACGA+TGG | + | chr3_3:70780038-70780057 | Msa0469070:three_prime_UTR | 40.0% |
| TCCAGTCACAGCATATACAT+TGG | - | chr3_3:70780079-70780098 | None:intergenic | 40.0% | |
| GAGGGCAGAAAAACACATTA+TGG | - | chr3_3:70780122-70780141 | None:intergenic | 40.0% | |
| ! | AAGAAGGTACACGGAAATGG+AGG | - | chr3_3:70774284-70774303 | None:intergenic | 45.0% |
| ! | GGAAAGAAGGTACACGGAAA+TGG | - | chr3_3:70774287-70774306 | None:intergenic | 45.0% |
| ! | AGTGGTGGAAAGAAGGTACA+CGG | - | chr3_3:70774293-70774312 | None:intergenic | 45.0% |
| ! | TGAACAGAGTGGTGGAAAGA+AGG | - | chr3_3:70774300-70774319 | None:intergenic | 45.0% |
| CAACGCTCCTATCAAAAACC+CGG | + | chr3_3:70774339-70774358 | Msa0469070:five_prime_UTR | 45.0% | |
| !! | TGAAAAAACCAAGCACCGAC+CGG | - | chr3_3:70774361-70774380 | None:intergenic | 45.0% |
| AACAGAGCCGCCATTATTTG+GGG | - | chr3_3:70774403-70774422 | None:intergenic | 45.0% | |
| GTAACAGAGCCGCCATTATT+TGG | - | chr3_3:70774405-70774424 | None:intergenic | 45.0% | |
| TCTCTTCTCCGTTCGTAAAC+CGG | + | chr3_3:70774443-70774462 | Msa0469070:CDS | 45.0% | |
| AGGTCGAAGTGGAAGATGAT+TGG | - | chr3_3:70774476-70774495 | None:intergenic | 45.0% | |
| CAGGGAATTGTTTAACCGAG+CGG | + | chr3_3:70774612-70774631 | Msa0469070:CDS | 45.0% | |
| GAATTGTTTAACCGAGCGGA+GGG | + | chr3_3:70774616-70774635 | Msa0469070:CDS | 45.0% | |
| TGTAAAGAAAACCCTCCGCT+CGG | - | chr3_3:70774630-70774649 | None:intergenic | 45.0% | |
| !! | TGCTGTTTCGTCTTCCGATA+CGG | + | chr3_3:70774663-70774682 | Msa0469070:CDS | 45.0% |
| ! | GTTAACGGTGTCAGCAGTTA+TGG | + | chr3_3:70774961-70774980 | Msa0469070:intron | 45.0% |
| GTCAGCAGTTATGGTTACCA+TGG | + | chr3_3:70774970-70774989 | Msa0469070:intron | 45.0% | |
| CTTCAGCTTATTGAGCGACA+TGG | + | chr3_3:70775240-70775259 | Msa0469070:intron | 45.0% | |
| GAAACAGAAAGGGAAACCGA+TGG | - | chr3_3:70775360-70775379 | None:intergenic | 45.0% | |
| GTGTCATGGAAACACAACTC+TGG | + | chr3_3:70775383-70775402 | Msa0469070:intron | 45.0% | |
| !!! | CGTTTTCAGGTACTCAAGGA+CGG | + | chr3_3:70775619-70775638 | Msa0469070:intron | 45.0% |
| !!! | GTTTTCAGGTACTCAAGGAC+GGG | + | chr3_3:70775620-70775639 | Msa0469070:intron | 45.0% |
| TTGCATGTGCCGTATGCTTA+TGG | + | chr3_3:70775652-70775671 | Msa0469070:CDS | 45.0% | |
| TCAAAAGAACAGGACCCGTA+TGG | - | chr3_3:70775794-70775813 | None:intergenic | 45.0% | |
| TTCTCAGGTAGAATCTGCCA+TGG | + | chr3_3:70775926-70775945 | Msa0469070:intron | 45.0% | |
| TTGCAAAGATCGCATAGCCA+TGG | - | chr3_3:70775946-70775965 | None:intergenic | 45.0% | |
| TTCTGGATAGCCTTCACTTG+AGG | - | chr3_3:70775969-70775988 | None:intergenic | 45.0% | |
| GCTATCCAGAAACAGTATGC+CGG | + | chr3_3:70775978-70775997 | Msa0469070:CDS | 45.0% | |
| CTATCCAGAAACAGTATGCC+GGG | + | chr3_3:70775979-70775998 | Msa0469070:CDS | 45.0% | |
| TATCCAGAAACAGTATGCCG+GGG | + | chr3_3:70775980-70775999 | Msa0469070:CDS | 45.0% | |
| GCCAACATTAATCCTCTAGC+AGG | + | chr3_3:70776596-70776615 | Msa0469070:CDS | 45.0% | |
| ATGACATGGATACCTGCTAG+AGG | - | chr3_3:70776611-70776630 | None:intergenic | 45.0% | |
| GGGTTGTAGACTGTAGTCAT+AGG | + | chr3_3:70776650-70776669 | Msa0469070:intron | 45.0% | |
| ! | TTATGGCTTGGGTAGGTAGA+TGG | + | chr3_3:70776807-70776826 | Msa0469070:intron | 45.0% |
| ! | GTGTTGTTAAGAGAACAGGC+AGG | - | chr3_3:70776933-70776952 | None:intergenic | 45.0% |
| TAACAACACCAGTGTGGATC+GGG | + | chr3_3:70776944-70776963 | Msa0469070:CDS | 45.0% | |
| GTAGTTGGACCAGAAAGAGA+AGG | - | chr3_3:70777138-70777157 | None:intergenic | 45.0% | |
| GTCCAACTACAATTGCAGCT+CGG | + | chr3_3:70777148-70777167 | Msa0469070:CDS | 45.0% | |
| ACAATTGCAGCTCGGCAAAA+CGG | + | chr3_3:70777156-70777175 | Msa0469070:CDS | 45.0% | |
| TGAAGAACTTAAGTGGGCCA+AGG | - | chr3_3:70777490-70777509 | None:intergenic | 45.0% | |
| GTAATAGGCCTCCAATTGTG+AGG | - | chr3_3:70777532-70777551 | None:intergenic | 45.0% | |
| !! | GGTAATTTCTGGCAGGTTCT+AGG | + | chr3_3:70777629-70777648 | Msa0469070:intron | 45.0% |
| !! | AATTTCTGGCAGGTTCTAGG+TGG | + | chr3_3:70777632-70777651 | Msa0469070:intron | 45.0% |
| AATGTATCTGGCCATCCAAG+GGG | - | chr3_3:70777728-70777747 | None:intergenic | 45.0% | |
| CAATGTATCTGGCCATCCAA+GGG | - | chr3_3:70777729-70777748 | None:intergenic | 45.0% | |
| TGAGAGACAACCAGCAAAAC+AGG | - | chr3_3:70777767-70777786 | None:intergenic | 45.0% | |
| CCTGTGATGACTGCATTATC+TGG | - | chr3_3:70777802-70777821 | None:intergenic | 45.0% | |
| CCAGATAATGCAGTCATCAC+AGG | + | chr3_3:70777799-70777818 | Msa0469070:CDS | 45.0% | |
| TTCTTCAGTCCACAGGTTCA+GGG | - | chr3_3:70777884-70777903 | None:intergenic | 45.0% | |
| TTTCTTCAGTCCACAGGTTC+AGG | - | chr3_3:70777885-70777904 | None:intergenic | 45.0% | |
| ! | TAATAGGGTGTCCGCAGTAT+AGG | - | chr3_3:70778041-70778060 | None:intergenic | 45.0% |
| AGGATCAGTAGCCTGAATCA+TGG | - | chr3_3:70778417-70778436 | None:intergenic | 45.0% | |
| CAGTAAAGGCTAAGACCTGA+AGG | - | chr3_3:70778509-70778528 | None:intergenic | 45.0% | |
| ! | CTTCAGGTCTTAGCCTTTAC+TGG | + | chr3_3:70778507-70778526 | Msa0469070:CDS | 45.0% |
| GCACACGTAAAACCTTCCAA+TGG | + | chr3_3:70778533-70778552 | Msa0469070:intron | 45.0% | |
| CAGTATCATCAGCCACAGAT+TGG | - | chr3_3:70779073-70779092 | None:intergenic | 45.0% | |
| GACATAAAACAGCAGTGCCA+AGG | - | chr3_3:70779335-70779354 | None:intergenic | 45.0% | |
| CTTGGTTCCTGTGAAATTGG+AGG | - | chr3_3:70779608-70779627 | None:intergenic | 45.0% | |
| TCAGCTGCTGTATAATTGGC+TGG | + | chr3_3:70779725-70779744 | Msa0469070:intron | 45.0% | |
| CTGGTCAAGCTGTCATCTAT+TGG | + | chr3_3:70779744-70779763 | Msa0469070:intron | 45.0% | |
| GCCAATGTATATGCTGTGAC+TGG | + | chr3_3:70780075-70780094 | Msa0469070:three_prime_UTR | 45.0% | |
| AGAAAGCGGAGTGAACAGAG+TGG | - | chr3_3:70774311-70774330 | None:intergenic | 50.0% | |
| GCTCCTATCAAAAACCCGGT+CGG | + | chr3_3:70774343-70774362 | Msa0469070:five_prime_UTR | 50.0% | |
| !! | GAAAAAACCAAGCACCGACC+GGG | - | chr3_3:70774360-70774379 | None:intergenic | 50.0% |
| !! | GAAGATGATTGGCTCTGCTC+CGG | - | chr3_3:70774465-70774484 | None:intergenic | 50.0% |
| TCGACCAAACGCTTTCTTCG+CGG | + | chr3_3:70774517-70774536 | Msa0469070:CDS | 50.0% | |
| !! | AGAACCGCGAAGAAAGCGTT+TGG | - | chr3_3:70774524-70774543 | None:intergenic | 50.0% |
| ATGAAATCCGAACCGGGCAA+CGG | - | chr3_3:70774551-70774570 | None:intergenic | 50.0% | |
| AACCGGGATGAAATCCGAAC+CGG | - | chr3_3:70774558-70774577 | None:intergenic | 50.0% | |
| !! | TTCCGGCTCGGGTAAAAAAC+CGG | - | chr3_3:70774575-70774594 | None:intergenic | 50.0% |
| AATTCAGCATCTTCCGGCTC+GGG | - | chr3_3:70774586-70774605 | None:intergenic | 50.0% | |
| GAATTCAGCATCTTCCGGCT+CGG | - | chr3_3:70774587-70774606 | None:intergenic | 50.0% | |
| GGAATTGTTTAACCGAGCGG+AGG | + | chr3_3:70774615-70774634 | Msa0469070:CDS | 50.0% | |
| GGTGGTTGTTATCGCCGTAT+CGG | - | chr3_3:70774680-70774699 | None:intergenic | 50.0% | |
| GTTATTCTGTTTAGCGGCGG+TGG | - | chr3_3:70774707-70774726 | None:intergenic | 50.0% | |
| ! | TGAGGTGGTAGGTAGGGTTT+TGG | + | chr3_3:70774939-70774958 | Msa0469070:intron | 50.0% |
| TTAGTCTCTGCGTCGTACGT+GGG | - | chr3_3:70775280-70775299 | None:intergenic | 50.0% | |
| TTTAGTCTCTGCGTCGTACG+TGG | - | chr3_3:70775281-70775300 | None:intergenic | 50.0% | |
| GGCCACATCCTAAAAGCCAT+AGG | - | chr3_3:70776681-70776700 | None:intergenic | 50.0% | |
| TGCCGAGCTGCAATTGTAGT+TGG | - | chr3_3:70777153-70777172 | None:intergenic | 50.0% | |
| ACTTAAGTGGGCCAAGGACT+GGG | - | chr3_3:70777484-70777503 | None:intergenic | 50.0% | |
| AACTTAAGTGGGCCAAGGAC+TGG | - | chr3_3:70777485-70777504 | None:intergenic | 50.0% | |
| CCAATGTATCTGGCCATCCA+AGG | - | chr3_3:70777730-70777749 | None:intergenic | 50.0% | |
| CCTTGGATGGCCAGATACAT+TGG | + | chr3_3:70777727-70777746 | Msa0469070:CDS | 50.0% | |
| CCAGCAAAACAGGCAAGACA+AGG | - | chr3_3:70777757-70777776 | None:intergenic | 50.0% | |
| ! | CCTTGTCTTGCCTGTTTTGC+TGG | + | chr3_3:70777754-70777773 | Msa0469070:CDS | 50.0% |
| TAATGCTCTCCCTGAACCTG+TGG | + | chr3_3:70777872-70777891 | Msa0469070:intron | 50.0% | |
| GACAGCCTGGCTATACCAAA+AGG | - | chr3_3:70778237-70778256 | None:intergenic | 50.0% | |
| GTATAGCCAGGCTGTCTAAC+TGG | + | chr3_3:70778241-70778260 | Msa0469070:intron | 50.0% | |
| GATGATCCAGTTAGACAGCC+TGG | - | chr3_3:70778250-70778269 | None:intergenic | 50.0% | |
| ! | ACTAACTTGTCACCAGGTCG+TGG | - | chr3_3:70778813-70778832 | None:intergenic | 50.0% |
| AGAAGAGAAAAGGAAGGCCG+AGG | + | chr3_3:70778968-70778987 | Msa0469070:CDS | 50.0% | |
| ! | AGCTTTAGCTGCTGCTTCCT+CGG | - | chr3_3:70778988-70779007 | None:intergenic | 50.0% |
| ! | GCAACGTCCCATTCGATTTG+AGG | + | chr3_3:70779794-70779813 | Msa0469070:three_prime_UTR | 50.0% |
| GGATTTCTACATTGGCCGGT+CGG | + | chr3_3:70779868-70779887 | Msa0469070:three_prime_UTR | 50.0% | |
| ! | TGGCTGACATGCAGCTTTGT+AGG | + | chr3_3:70779918-70779937 | Msa0469070:three_prime_UTR | 50.0% |
| AAGCGGAGTGAACAGAGTGG+TGG | - | chr3_3:70774308-70774327 | None:intergenic | 55.0% | |
| !! | GCACCGACCGGGTTTTTGAT+AGG | - | chr3_3:70774349-70774368 | None:intergenic | 55.0% |
| ! | TCAAAAACCCGGTCGGTGCT+TGG | + | chr3_3:70774350-70774369 | Msa0469070:five_prime_UTR | 55.0% |
| ! | GAGAGTATAGTCGGCGTGCA+AGG | - | chr3_3:70774427-70774446 | None:intergenic | 55.0% |
| GCTCTGCTCCGGTTTACGAA+CGG | - | chr3_3:70774454-70774473 | None:intergenic | 55.0% | |
| !! | GAAAGCGTTTGGTCGAGCCT+GGG | - | chr3_3:70774513-70774532 | None:intergenic | 55.0% |
| !! | AGAAAGCGTTTGGTCGAGCC+TGG | - | chr3_3:70774514-70774533 | None:intergenic | 55.0% |
| TCTCTTTCCGTTGCCCGGTT+CGG | + | chr3_3:70774541-70774560 | Msa0469070:CDS | 55.0% | |
| ACCGGGATGAAATCCGAACC+GGG | - | chr3_3:70774557-70774576 | None:intergenic | 55.0% | |
| !!! | TCCCGGTTTTTTACCCGAGC+CGG | + | chr3_3:70774570-70774589 | Msa0469070:CDS | 55.0% |
| !! | TCCGGCTCGGGTAAAAAACC+GGG | - | chr3_3:70774574-70774593 | None:intergenic | 55.0% |
| ATTCTGTTTAGCGGCGGTGG+TGG | - | chr3_3:70774704-70774723 | None:intergenic | 55.0% | |
| GATCCCCGGCATACTGTTTC+TGG | - | chr3_3:70775986-70776005 | None:intergenic | 55.0% | |
| GAAACAGTATGCCGGGGATC+AGG | + | chr3_3:70775986-70776005 | Msa0469070:CDS | 55.0% | |
| ! | TGGCTTGGGTAGGTAGATGG+AGG | + | chr3_3:70776810-70776829 | Msa0469070:intron | 55.0% |
| AGAGAACAGGCAGGCATCCT+GGG | - | chr3_3:70776924-70776943 | None:intergenic | 55.0% | |
| AAGAGAACAGGCAGGCATCC+TGG | - | chr3_3:70776925-70776944 | None:intergenic | 55.0% | |
| CGATATAGCCCGATCCACAC+TGG | - | chr3_3:70776955-70776974 | None:intergenic | 55.0% | |
| !! | AAAAGCGCTGTCCCAGTCCT+TGG | + | chr3_3:70777470-70777489 | Msa0469070:intron | 55.0% |
| TATCTGGCCATCCAAGGGGA+GGG | - | chr3_3:70777724-70777743 | None:intergenic | 55.0% | |
| ACATCAGAAGGACCACGACC+TGG | + | chr3_3:70778798-70778817 | Msa0469070:CDS | 55.0% | |
| ! | CGTCCCATTCGATTTGAGGC+TGG | + | chr3_3:70779798-70779817 | Msa0469070:three_prime_UTR | 55.0% |
| TAAACCCAACCCATGCCGAC+CGG | - | chr3_3:70779886-70779905 | None:intergenic | 55.0% | |
| GCGTGAGAGTGAGGTCGAAG+TGG | - | chr3_3:70774487-70774506 | None:intergenic | 60.0% | |
| GCGGTTCTCTTTCCGTTGCC+CGG | + | chr3_3:70774536-70774555 | Msa0469070:CDS | 60.0% | |
| !! | GCCCGGTTCGGATTTCATCC+CGG | + | chr3_3:70774553-70774572 | Msa0469070:CDS | 60.0% |
| GCAGCTCGGCAAAACGGAAG+TGG | + | chr3_3:70777162-70777181 | Msa0469070:CDS | 60.0% | |
| ATGGTCACCCTCCCCTTGGA+TGG | + | chr3_3:70777714-70777733 | Msa0469070:CDS | 60.0% | |
| GTATCTGGCCATCCAAGGGG+AGG | - | chr3_3:70777725-70777744 | None:intergenic | 60.0% | |
| TCTACATTGGCCGGTCGGCA+TGG | + | chr3_3:70779873-70779892 | Msa0469070:three_prime_UTR | 60.0% | |
| CTACATTGGCCGGTCGGCAT+GGG | + | chr3_3:70779874-70779893 | Msa0469070:three_prime_UTR | 60.0% | |
| ! | CCTGGGAAGGCGTGAGAGTG+AGG | - | chr3_3:70774496-70774515 | None:intergenic | 65.0% |
| CCTCACTCTCACGCCTTCCC+AGG | + | chr3_3:70774493-70774512 | Msa0469070:CDS | 65.0% | |
| GCGTTTGGTCGAGCCTGGGA+AGG | - | chr3_3:70774509-70774528 | None:intergenic | 65.0% | |
| !! | TTTAGCGGCGGTGGTGGTGG+TGG | - | chr3_3:70774698-70774717 | None:intergenic | 65.0% |
| ! | CTGTTTAGCGGCGGTGGTGG+TGG | - | chr3_3:70774701-70774720 | None:intergenic | 65.0% |
| CAGGATGGTCACCCTCCCCT+TGG | + | chr3_3:70777710-70777729 | Msa0469070:intron | 65.0% | |
| ATTGGCCGGTCGGCATGGGT+TGG | + | chr3_3:70779878-70779897 | Msa0469070:three_prime_UTR | 65.0% | |
| TTGGCCGGTCGGCATGGGTT+GGG | + | chr3_3:70779879-70779898 | Msa0469070:three_prime_UTR | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 70774227 | 70780248 | 70774227 | ID=Msa0469070;Name=Msa0469070 |
| chr3_3 | mRNA | 70774227 | 70780248 | 70774227 | ID=Msa0469070-mRNA-1;Parent=Msa0469070;Name=Msa0469070-mRNA-1;_AED=0.11;_eAED=0.11;_QI=159|1|1|1|0.83|0.69|13|524|535 |
| chr3_3 | exon | 70774227 | 70774376 | 70774227 | ID=Msa0469070-mRNA-1:exon:17262;Parent=Msa0469070-mRNA-1 |
| chr3_3 | exon | 70774400 | 70774771 | 70774400 | ID=Msa0469070-mRNA-1:exon:17263;Parent=Msa0469070-mRNA-1 |
| chr3_3 | exon | 70775628 | 70775738 | 70775628 | ID=Msa0469070-mRNA-1:exon:17264;Parent=Msa0469070-mRNA-1 |
| chr3_3 | exon | 70775933 | 70776007 | 70775933 | ID=Msa0469070-mRNA-1:exon:17265;Parent=Msa0469070-mRNA-1 |
| chr3_3 | exon | 70776557 | 70776617 | 70776557 | ID=Msa0469070-mRNA-1:exon:17266;Parent=Msa0469070-mRNA-1 |
| chr3_3 | exon | 70776926 | 70776999 | 70776926 | ID=Msa0469070-mRNA-1:exon:17267;Parent=Msa0469070-mRNA-1 |
| chr3_3 | exon | 70777105 | 70777209 | 70777105 | ID=Msa0469070-mRNA-1:exon:17268;Parent=Msa0469070-mRNA-1 |
| chr3_3 | exon | 70777713 | 70777820 | 70777713 | ID=Msa0469070-mRNA-1:exon:17269;Parent=Msa0469070-mRNA-1 |
| chr3_3 | exon | 70778425 | 70778528 | 70778425 | ID=Msa0469070-mRNA-1:exon:17270;Parent=Msa0469070-mRNA-1 |
| chr3_3 | exon | 70778614 | 70778826 | 70778614 | ID=Msa0469070-mRNA-1:exon:17271;Parent=Msa0469070-mRNA-1 |
| chr3_3 | exon | 70778920 | 70779229 | 70778920 | ID=Msa0469070-mRNA-1:exon:17272;Parent=Msa0469070-mRNA-1 |
| chr3_3 | exon | 70779620 | 70779731 | 70779620 | ID=Msa0469070-mRNA-1:exon:17273;Parent=Msa0469070-mRNA-1 |
| chr3_3 | exon | 70779753 | 70780248 | 70779753 | ID=Msa0469070-mRNA-1:exon:17274;Parent=Msa0469070-mRNA-1 |
| chr3_3 | five_prime_UTR | 70774227 | 70774376 | 70774227 | ID=Msa0469070-mRNA-1:five_prime_utr;Parent=Msa0469070-mRNA-1 |
| chr3_3 | five_prime_UTR | 70774400 | 70774408 | 70774400 | ID=Msa0469070-mRNA-1:five_prime_utr;Parent=Msa0469070-mRNA-1 |
| chr3_3 | CDS | 70774409 | 70774771 | 70774409 | ID=Msa0469070-mRNA-1:cds;Parent=Msa0469070-mRNA-1 |
| chr3_3 | CDS | 70775628 | 70775738 | 70775628 | ID=Msa0469070-mRNA-1:cds;Parent=Msa0469070-mRNA-1 |
| chr3_3 | CDS | 70775933 | 70776007 | 70775933 | ID=Msa0469070-mRNA-1:cds;Parent=Msa0469070-mRNA-1 |
| chr3_3 | CDS | 70776557 | 70776617 | 70776557 | ID=Msa0469070-mRNA-1:cds;Parent=Msa0469070-mRNA-1 |
| chr3_3 | CDS | 70776926 | 70776999 | 70776926 | ID=Msa0469070-mRNA-1:cds;Parent=Msa0469070-mRNA-1 |
| chr3_3 | CDS | 70777105 | 70777209 | 70777105 | ID=Msa0469070-mRNA-1:cds;Parent=Msa0469070-mRNA-1 |
| chr3_3 | CDS | 70777713 | 70777820 | 70777713 | ID=Msa0469070-mRNA-1:cds;Parent=Msa0469070-mRNA-1 |
| chr3_3 | CDS | 70778425 | 70778528 | 70778425 | ID=Msa0469070-mRNA-1:cds;Parent=Msa0469070-mRNA-1 |
| chr3_3 | CDS | 70778614 | 70778826 | 70778614 | ID=Msa0469070-mRNA-1:cds;Parent=Msa0469070-mRNA-1 |
| chr3_3 | CDS | 70778920 | 70779229 | 70778920 | ID=Msa0469070-mRNA-1:cds;Parent=Msa0469070-mRNA-1 |
| chr3_3 | CDS | 70779620 | 70779703 | 70779620 | ID=Msa0469070-mRNA-1:cds;Parent=Msa0469070-mRNA-1 |
| chr3_3 | three_prime_UTR | 70779704 | 70779731 | 70779704 | ID=Msa0469070-mRNA-1:three_prime_utr;Parent=Msa0469070-mRNA-1 |
| chr3_3 | three_prime_UTR | 70779753 | 70780248 | 70779753 | ID=Msa0469070-mRNA-1:three_prime_utr;Parent=Msa0469070-mRNA-1 |
| Gene Sequence |
| Protein sequence |
