Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1180050 | sp|O04373|ILL4_ARATH | 66.368 | 446 | 142 | 5 | 3 | 447 | 2 | 440 | 0.0 | 602 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1180050 | Q0GXX4 | 95.078 | 447 | 22 | 0 | 1 | 447 | 1 | 447 | 0.0 | 861 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0014410 | Msa1180050 | 0.857842 | 1.239061e-62 | -8.615850e-47 |
| Msa0018470 | Msa1180050 | 0.817561 | 3.093847e-52 | -8.615850e-47 |
| Msa0035290 | Msa1180050 | 0.855613 | 5.609495e-62 | -8.615850e-47 |
| Msa0035400 | Msa1180050 | 0.858721 | 6.783738e-63 | -8.615850e-47 |
| Msa0044180 | Msa1180050 | 0.866183 | 3.434617e-65 | -8.615850e-47 |
| Msa0064550 | Msa1180050 | 0.865052 | 7.808284e-65 | -8.615850e-47 |
| Msa0090860 | Msa1180050 | 0.859153 | 5.036292e-63 | -8.615850e-47 |
| Msa0091470 | Msa1180050 | 0.803106 | 4.084621e-49 | -8.615850e-47 |
| Msa0101170 | Msa1180050 | -0.809966 | 1.457123e-50 | -8.615850e-47 |
| Msa0108070 | Msa1180050 | 0.822778 | 1.974489e-53 | -8.615850e-47 |
| Msa0109490 | Msa1180050 | 0.841879 | 3.634912e-58 | -8.615850e-47 |
| Msa0604880 | Msa1180050 | 0.821885 | 3.182509e-53 | -8.615850e-47 |
| Msa0605250 | Msa1180050 | 0.841584 | 4.348178e-58 | -8.615850e-47 |
| Msa0610810 | Msa1180050 | 0.802207 | 6.258385e-49 | -8.615850e-47 |
| Msa0622250 | Msa1180050 | 0.808502 | 3.000681e-50 | -8.615850e-47 |
| Msa0627050 | Msa1180050 | 0.814012 | 1.913411e-51 | -8.615850e-47 |
| Msa0646190 | Msa1180050 | 0.820342 | 7.214752e-53 | -8.615850e-47 |
| Msa0651310 | Msa1180050 | 0.820825 | 5.589344e-53 | -8.615850e-47 |
| Msa0659300 | Msa1180050 | -0.802474 | 5.515198e-49 | -8.615850e-47 |
| Msa0685890 | Msa1180050 | 0.818162 | 2.263945e-52 | -8.615850e-47 |
| Msa0693400 | Msa1180050 | 0.806869 | 6.671218e-50 | -8.615850e-47 |
| Msa0705420 | Msa1180050 | 0.801806 | 7.567284e-49 | -8.615850e-47 |
| Msa0709660 | Msa1180050 | 0.845682 | 3.488483e-59 | -8.615850e-47 |
| Msa0740210 | Msa1180050 | 0.833526 | 5.070240e-56 | -8.615850e-47 |
| Msa0746980 | Msa1180050 | 0.829125 | 6.132544e-55 | -8.615850e-47 |
| Msa0748330 | Msa1180050 | 0.801922 | 7.162622e-49 | -8.615850e-47 |
| Msa0749150 | Msa1180050 | 0.827189 | 1.794678e-54 | -8.615850e-47 |
| Msa0781390 | Msa1180050 | 0.853227 | 2.746880e-61 | -8.615850e-47 |
| Msa0790640 | Msa1180050 | 0.830654 | 2.600457e-55 | -8.615850e-47 |
| Msa0792880 | Msa1180050 | 0.818227 | 2.187831e-52 | -8.615850e-47 |
| Msa0801360 | Msa1180050 | 0.808049 | 3.748823e-50 | -8.615850e-47 |
| Msa0803530 | Msa1180050 | 0.827109 | 1.875885e-54 | -8.615850e-47 |
| Msa0818440 | Msa1180050 | 0.854595 | 1.108377e-61 | -8.615850e-47 |
| Msa0818550 | Msa1180050 | 0.857458 | 1.610433e-62 | -8.615850e-47 |
| Msa0820520 | Msa1180050 | 0.829295 | 5.576933e-55 | -8.615850e-47 |
| Msa0828570 | Msa1180050 | 0.818056 | 2.391979e-52 | -8.615850e-47 |
| Msa0828900 | Msa1180050 | 0.822962 | 1.788767e-53 | -8.615850e-47 |
| Msa0839830 | Msa1180050 | 0.804647 | 1.954299e-49 | -8.615850e-47 |
| Msa0129360 | Msa1180050 | 0.826377 | 2.804788e-54 | -8.615850e-47 |
| Msa0140290 | Msa1180050 | 0.816950 | 4.245244e-52 | -8.615850e-47 |
| Msa0146680 | Msa1180050 | 0.810343 | 1.208353e-50 | -8.615850e-47 |
| Msa0154220 | Msa1180050 | 0.836221 | 1.062789e-56 | -8.615850e-47 |
| Msa0154240 | Msa1180050 | 0.857302 | 1.790577e-62 | -8.615850e-47 |
| Msa0154270 | Msa1180050 | 0.881152 | 3.042811e-70 | -8.615850e-47 |
| Msa0155610 | Msa1180050 | 0.819459 | 1.148367e-52 | -8.615850e-47 |
| Msa0176040 | Msa1180050 | 0.828959 | 6.726263e-55 | -8.615850e-47 |
| Msa0183560 | Msa1180050 | 0.843345 | 1.483997e-58 | -8.615850e-47 |
| Msa0197030 | Msa1180050 | 0.815621 | 8.416599e-52 | -8.615850e-47 |
| Msa0212730 | Msa1180050 | 0.837487 | 5.050122e-57 | -8.615850e-47 |
| Msa0225880 | Msa1180050 | 0.868565 | 5.940058e-66 | -8.615850e-47 |
| Msa0364780 | Msa1180050 | 0.872531 | 2.961701e-67 | -8.615850e-47 |
| Msa0377280 | Msa1180050 | 0.829391 | 5.284469e-55 | -8.615850e-47 |
| Msa0379100 | Msa1180050 | 0.810794 | 9.653711e-51 | -8.615850e-47 |
| Msa0380650 | Msa1180050 | 0.800032 | 1.742760e-48 | -8.615850e-47 |
| Msa0384530 | Msa1180050 | 0.826189 | 3.109727e-54 | -8.615850e-47 |
| Msa0392020 | Msa1180050 | 0.826089 | 3.283869e-54 | -8.615850e-47 |
| Msa0392050 | Msa1180050 | 0.850877 | 1.278142e-60 | -8.615850e-47 |
| Msa0392540 | Msa1180050 | 0.815422 | 9.322251e-52 | -8.615850e-47 |
| Msa0401340 | Msa1180050 | 0.804004 | 2.660205e-49 | -8.615850e-47 |
| Msa0404690 | Msa1180050 | 0.836894 | 7.159290e-57 | -8.615850e-47 |
| Msa0412190 | Msa1180050 | 0.860138 | 2.544953e-63 | -8.615850e-47 |
| Msa0412250 | Msa1180050 | 0.828979 | 6.651093e-55 | -8.615850e-47 |
| Msa0418430 | Msa1180050 | 0.823757 | 1.166567e-53 | -8.615850e-47 |
| Msa0428730 | Msa1180050 | 0.835890 | 1.289228e-56 | -8.615850e-47 |
| Msa0430290 | Msa1180050 | 0.803364 | 3.611665e-49 | -8.615850e-47 |
| Msa0435010 | Msa1180050 | 0.853353 | 2.527826e-61 | -8.615850e-47 |
| Msa0437550 | Msa1180050 | 0.822915 | 1.834160e-53 | -8.615850e-47 |
| Msa0440310 | Msa1180050 | 0.813305 | 2.737622e-51 | -8.615850e-47 |
| Msa0448120 | Msa1180050 | 0.804624 | 1.975841e-49 | -8.615850e-47 |
| Msa0456760 | Msa1180050 | 0.884709 | 1.521005e-71 | -8.615850e-47 |
| Msa0462590 | Msa1180050 | 0.814176 | 1.760125e-51 | -8.615850e-47 |
| Msa0465800 | Msa1180050 | 0.824542 | 7.631153e-54 | -8.615850e-47 |
| Msa0469070 | Msa1180050 | 0.807851 | 4.131129e-50 | -8.615850e-47 |
| Msa0469950 | Msa1180050 | 0.849157 | 3.871327e-60 | -8.615850e-47 |
| Msa0472740 | Msa1180050 | 0.811409 | 7.104806e-51 | -8.615850e-47 |
| Msa0479030 | Msa1180050 | 0.835943 | 1.249747e-56 | -8.615850e-47 |
| Msa0479100 | Msa1180050 | 0.836873 | 7.249950e-57 | -8.615850e-47 |
| Msa0481490 | Msa1180050 | 0.809136 | 2.196535e-50 | -8.615850e-47 |
| Msa0984000 | Msa1180050 | 0.874371 | 7.113850e-68 | -8.615850e-47 |
| Msa1031150 | Msa1180050 | 0.818601 | 1.800029e-52 | -8.615850e-47 |
| Msa1070250 | Msa1180050 | 0.803285 | 3.750313e-49 | -8.615850e-47 |
| Msa1071640 | Msa1180050 | 0.834012 | 3.832870e-56 | -8.615850e-47 |
| Msa1082150 | Msa1180050 | 0.806702 | 7.235628e-50 | -8.615850e-47 |
| Msa0238860 | Msa1180050 | 0.809153 | 2.178063e-50 | -8.615850e-47 |
| Msa0245870 | Msa1180050 | 0.802499 | 5.449153e-49 | -8.615850e-47 |
| Msa0253160 | Msa1180050 | 0.859897 | 3.009237e-63 | -8.615850e-47 |
| Msa0260470 | Msa1180050 | 0.859474 | 4.033020e-63 | -8.615850e-47 |
| Msa0276590 | Msa1180050 | 0.808446 | 3.085522e-50 | -8.615850e-47 |
| Msa0291940 | Msa1180050 | 0.854170 | 1.470823e-61 | -8.615850e-47 |
| Msa0303440 | Msa1180050 | 0.810737 | 9.935015e-51 | -8.615850e-47 |
| Msa0303500 | Msa1180050 | 0.804291 | 2.318315e-49 | -8.615850e-47 |
| Msa0304110 | Msa1180050 | 0.868041 | 8.767589e-66 | -8.615850e-47 |
| Msa0341190 | Msa1180050 | 0.860387 | 2.140328e-63 | -8.615850e-47 |
| Msa0344680 | Msa1180050 | 0.852044 | 5.974395e-61 | -8.615850e-47 |
| Msa0344710 | Msa1180050 | 0.821737 | 3.443046e-53 | -8.615850e-47 |
| Msa0346790 | Msa1180050 | 0.806515 | 7.924694e-50 | -8.615850e-47 |
| Msa0358290 | Msa1180050 | 0.865309 | 6.486071e-65 | -8.615850e-47 |
| Msa1108540 | Msa1180050 | -0.801187 | 1.013593e-48 | -8.615850e-47 |
| Msa1119570 | Msa1180050 | 0.848955 | 4.407135e-60 | -8.615850e-47 |
| Msa1132330 | Msa1180050 | -0.804567 | 2.030876e-49 | -8.615850e-47 |
| Msa1137940 | Msa1180050 | 0.890455 | 9.701692e-74 | -8.615850e-47 |
| Msa1144700 | Msa1180050 | 0.835598 | 1.528997e-56 | -8.615850e-47 |
| Msa1144730 | Msa1180050 | 0.849708 | 2.719135e-60 | -8.615850e-47 |
| Msa1152290 | Msa1180050 | -0.808835 | 2.547894e-50 | -8.615850e-47 |
| Msa1158090 | Msa1180050 | 0.850794 | 1.348639e-60 | -8.615850e-47 |
| Msa1161210 | Msa1180050 | 0.817773 | 2.770917e-52 | -8.615850e-47 |
| Msa1180050 | Msa1198720 | 0.849853 | 2.475762e-60 | -8.615850e-47 |
| Msa1180050 | Msa1212760 | 0.804034 | 2.621261e-49 | -8.615850e-47 |
| Msa1180050 | Msa1219060 | 0.800806 | 1.212613e-48 | -8.615850e-47 |
| Msa1180050 | Msa1232270 | 0.973555 | 1.257050e-136 | -8.615850e-47 |
| Msa1180050 | Msa1252300 | 0.864379 | 1.268824e-64 | -8.615850e-47 |
| Msa1180050 | Msa1270770 | 0.995334 | 3.061945e-215 | -8.615850e-47 |
| Msa1180050 | Msa1281270 | 0.806856 | 6.713948e-50 | -8.615850e-47 |
| Msa1180050 | Msa1292960 | 0.843724 | 1.174790e-58 | -8.615850e-47 |
| Msa1180050 | Msa1313050 | 0.929612 | 5.414311e-93 | -8.615850e-47 |
| Msa1180050 | Msa1320380 | 0.812472 | 4.167924e-51 | -8.615850e-47 |
| Msa1180050 | Msa1349810 | 0.834443 | 2.988332e-56 | -8.615850e-47 |
| Msa1180050 | Msa1354090 | 0.805607 | 1.230339e-49 | -8.615850e-47 |
| Msa1180050 | Msa1358340 | 0.816429 | 5.554642e-52 | -8.615850e-47 |
| Msa1180050 | Msa1359890 | 0.819518 | 1.113356e-52 | -8.615850e-47 |
| Msa1180050 | Msa1375780 | 0.803620 | 3.195769e-49 | -8.615850e-47 |
| Msa1180050 | Msa1394900 | 0.843793 | 1.126133e-58 | -8.615850e-47 |
| Msa1180050 | Msa1421870 | 0.818261 | 2.149688e-52 | -8.615850e-47 |
| Msa1180050 | Msa1434660 | 0.816284 | 5.986895e-52 | -8.615850e-47 |
| Msa1180050 | Msa1459540 | 0.821510 | 3.886088e-53 | -8.615850e-47 |
| Msa1180050 | Msa1466350 | 0.803160 | 3.980012e-49 | -8.615850e-47 |
| Msa0487490 | Msa1180050 | 0.800023 | 1.750791e-48 | -8.615850e-47 |
| Msa0504090 | Msa1180050 | 0.871459 | 6.723168e-67 | -8.615850e-47 |
| Msa0545230 | Msa1180050 | 0.804215 | 2.404542e-49 | -8.615850e-47 |
| Msa0549540 | Msa1180050 | 0.839110 | 1.927663e-57 | -8.615850e-47 |
| Msa0556070 | Msa1180050 | 0.802441 | 5.602224e-49 | -8.615850e-47 |
| Msa0570680 | Msa1180050 | 0.833336 | 5.653046e-56 | -8.615850e-47 |
| Msa0858910 | Msa1180050 | 0.814275 | 1.673818e-51 | -8.615850e-47 |
| Msa0860920 | Msa1180050 | 0.853041 | 3.106122e-61 | -8.615850e-47 |
| Msa0899730 | Msa1180050 | 0.800922 | 1.148315e-48 | -8.615850e-47 |
| Msa0968780 | Msa1180050 | 0.833606 | 4.842641e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1180050 | MtrunA17_Chr8g0341471 | 95.078 | 447 | 22 | 0 | 1 | 447 | 1 | 447 | 0.0 | 861 |
| Msa1180050 | MtrunA17_Chr2g0330661 | 72.326 | 430 | 112 | 5 | 22 | 447 | 21 | 447 | 0.0 | 626 |
| Msa1180050 | MtrunA17_Chr2g0328461 | 71.981 | 414 | 113 | 3 | 34 | 447 | 41 | 451 | 0.0 | 620 |
| Msa1180050 | MtrunA17_Chr2g0330671 | 68.456 | 447 | 132 | 5 | 7 | 447 | 8 | 451 | 0.0 | 618 |
| Msa1180050 | MtrunA17_Chr2g0330721 | 71.498 | 414 | 115 | 3 | 34 | 447 | 42 | 452 | 0.0 | 615 |
| Msa1180050 | MtrunA17_Chr3g0124881 | 56.234 | 393 | 170 | 2 | 39 | 431 | 85 | 475 | 7.44e-162 | 465 |
| Msa1180050 | MtrunA17_Chr8g0364301 | 56.608 | 401 | 169 | 4 | 28 | 427 | 28 | 424 | 1.57e-155 | 447 |
| Msa1180050 | MtrunA17_Chr8g0371561 | 55.583 | 403 | 172 | 5 | 24 | 424 | 31 | 428 | 3.59e-152 | 439 |
| Msa1180050 | MtrunA17_Chr3g0128101 | 48.921 | 417 | 209 | 3 | 15 | 431 | 6 | 418 | 1.17e-143 | 417 |
| Msa1180050 | MtrunA17_Chr2g0328481 | 59.819 | 331 | 85 | 4 | 162 | 447 | 4 | 331 | 2.69e-129 | 377 |
| Msa1180050 | MtrunA17_Chr2g0328471 | 68.750 | 176 | 52 | 3 | 7 | 180 | 4 | 178 | 1.64e-80 | 247 |
| Msa1180050 | MtrunA17_Chr2g0330711 | 73.418 | 158 | 40 | 2 | 7 | 162 | 4 | 161 | 5.58e-77 | 237 |
| Msa1180050 | MtrunA17_Chr8g0364461 | 43.396 | 318 | 146 | 10 | 119 | 433 | 96 | 382 | 6.04e-71 | 230 |
| Msa1180050 | MtrunA17_Chr1g0158601 | 73.214 | 56 | 15 | 0 | 210 | 265 | 4 | 59 | 8.07e-21 | 85.9 |
| Msa1180050 | MtrunA17_Chr3g0128121 | 62.500 | 40 | 15 | 0 | 134 | 173 | 1 | 40 | 2.50e-12 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1180050 | AT1G51760.1 | 66.368 | 446 | 142 | 5 | 3 | 447 | 2 | 440 | 0.0 | 602 |
| Msa1180050 | AT1G51780.1 | 64.593 | 418 | 145 | 3 | 13 | 429 | 9 | 424 | 0.0 | 556 |
| Msa1180050 | AT5G56660.1 | 61.650 | 412 | 150 | 4 | 36 | 447 | 36 | 439 | 0.0 | 520 |
| Msa1180050 | AT5G56650.1 | 61.985 | 413 | 145 | 7 | 37 | 447 | 36 | 438 | 0.0 | 513 |
| Msa1180050 | AT5G56650.2 | 69.818 | 275 | 81 | 1 | 37 | 311 | 36 | 308 | 4.86e-141 | 406 |
| Msa1180050 | AT3G02875.1 | 50.246 | 406 | 198 | 3 | 27 | 431 | 28 | 430 | 4.76e-136 | 398 |
| Msa1180050 | AT1G44350.1 | 52.051 | 390 | 180 | 3 | 39 | 428 | 77 | 459 | 8.50e-136 | 399 |
| Msa1180050 | AT5G54140.1 | 47.826 | 391 | 201 | 3 | 49 | 438 | 39 | 427 | 6.43e-130 | 382 |
| Msa1180050 | AT3G02875.2 | 53.521 | 284 | 132 | 0 | 27 | 310 | 28 | 311 | 1.34e-105 | 317 |
| Msa1180050 | AT3G02875.3 | 53.226 | 248 | 116 | 0 | 27 | 274 | 28 | 275 | 1.44e-90 | 278 |
Find 102 sgRNAs with CRISPR-Local
Find 319 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGTGTCATGACACCATTTA+TGG | 0.164724 | 8_1:+13791529 | Msa1180050:CDS |
| CGCACCGGAAGCTGCTAATA+TGG | 0.208424 | 8_1:-13790173 | None:intergenic |
| TTTACAGTTGGAGGATAAAA+AGG | 0.228613 | 8_1:-13791440 | None:intergenic |
| GAAAATGTCACTGCTATCTT+TGG | 0.241802 | 8_1:+13790013 | Msa1180050:CDS |
| AATTCCTCATAACCCAATTC+TGG | 0.257328 | 8_1:-13787135 | None:intergenic |
| TGTTGCTTTAAGAGCTGATA+TGG | 0.312924 | 8_1:+13787269 | Msa1180050:CDS |
| AATGAAGATGGTCTCCCTTA+TGG | 0.314381 | 8_1:+13791671 | Msa1180050:CDS |
| GAAGAAGACATGGTTTGTTT+TGG | 0.321385 | 8_1:-13786940 | None:intergenic |
| ACTGGTGTCATTGGCTTCAT+TGG | 0.332227 | 8_1:+13787228 | Msa1180050:CDS |
| TGAATTGATAAGAGCAGAAT+TGG | 0.334675 | 8_1:+13787167 | Msa1180050:CDS |
| AAGCCACTTCCTGCCAATAT+TGG | 0.337443 | 8_1:-13790088 | None:intergenic |
| GATTCATGAGAATCCAGAAT+TGG | 0.342684 | 8_1:+13787122 | Msa1180050:CDS |
| GTTGCAGTCACTGGTGTCAT+TGG | 0.356001 | 8_1:+13787219 | Msa1180050:CDS |
| TCATTTATGCAGGTTATCAT+TGG | 0.356258 | 8_1:+13791362 | Msa1180050:intron |
| AAGTCTTCAGATCCCATAAA+TGG | 0.356384 | 8_1:-13791542 | None:intergenic |
| TAATGCATTCAATGTTATTC+CGG | 0.359601 | 8_1:+13790899 | Msa1180050:CDS |
| ACTGCAACTGGATGTTTATA+AGG | 0.366834 | 8_1:-13787204 | None:intergenic |
| GTCATTGGCTTCATTGGAAC+AGG | 0.368975 | 8_1:+13787234 | Msa1180050:CDS |
| ATTGGATGATCAATATTAGA+AGG | 0.380397 | 8_1:+13787097 | Msa1180050:CDS |
| CTCTAGGTCTGGTCCAATAT+TGG | 0.382393 | 8_1:+13790075 | Msa1180050:CDS |
| GCAACTGTGGACTTCCTTCA+TGG | 0.390813 | 8_1:+13791410 | Msa1180050:CDS |
| GATGACAAAATTTGTGTTGC+AGG | 0.392661 | 8_1:-13787012 | None:intergenic |
| CATTGAATGCATTACCTCCT+TGG | 0.394140 | 8_1:-13790890 | None:intergenic |
| GTTAAAGCTTTCTTTAGAAA+AGG | 0.408192 | 8_1:-13790952 | None:intergenic |
| ATGACACCAGTGACTGCAAC+TGG | 0.422420 | 8_1:-13787216 | None:intergenic |
| CCCCTCCTTCCTCTGCTGGT+TGG | 0.427309 | 8_1:-13789955 | None:intergenic |
| GGTGAAGTGGCCTCTAGGTC+TGG | 0.429572 | 8_1:+13790064 | Msa1180050:CDS |
| CCTGGATACTTCTTCATGCT+TGG | 0.432844 | 8_1:+13791587 | Msa1180050:CDS |
| GACCCCATATTAGCAGCTTC+CGG | 0.436531 | 8_1:+13790169 | Msa1180050:CDS |
| GCACCGGAAGCTGCTAATAT+GGG | 0.436843 | 8_1:-13790172 | None:intergenic |
| CTAGAGGCCACTTCACCAAT+TGG | 0.441010 | 8_1:-13790058 | None:intergenic |
| TAAGATGAAGATTAGGTGGC+TGG | 0.452500 | 8_1:-13786834 | None:intergenic |
| CCACCAATTGTGACATGATC+CGG | 0.453558 | 8_1:-13790918 | None:intergenic |
| AAATTAATGCTGATATTACT+TGG | 0.453975 | 8_1:+13791957 | Msa1180050:three_prime_UTR |
| ATTCCGGATCATGTCACAAT+TGG | 0.455454 | 8_1:+13790915 | Msa1180050:CDS |
| AGTGTCATGACACCATTTAT+GGG | 0.458073 | 8_1:+13791530 | Msa1180050:CDS |
| ATCTATGGCTAAGGCAACAT+TGG | 0.459883 | 8_1:-13791811 | None:intergenic |
| ATTGCTCCTGACTTACCAAT+TGG | 0.462008 | 8_1:+13790043 | Msa1180050:CDS |
| TATGGATGCTCTTTCTATGC+AGG | 0.463188 | 8_1:+13787287 | Msa1180050:CDS |
| GCATGAAGTGCAGCTCCATA+AGG | 0.472341 | 8_1:-13791686 | None:intergenic |
| ACTTCACCAATTGGTAAGTC+AGG | 0.474836 | 8_1:-13790049 | None:intergenic |
| TTCTATCAAGAGGTCATACC+TGG | 0.480618 | 8_1:+13791569 | Msa1180050:CDS |
| TCACCATTGTTTACAGTTGG+AGG | 0.482103 | 8_1:-13791449 | None:intergenic |
| ATGGTAACATATGAATTTGA+AGG | 0.483343 | 8_1:-13786962 | None:intergenic |
| AACTTAGGAAATGGTGGAGT+GGG | 0.484788 | 8_1:+13788723 | Msa1180050:intron |
| ATTCATGAGAATCCAGAATT+GGG | 0.487924 | 8_1:+13787123 | Msa1180050:CDS |
| TTCTTTAGAAAAGGCTCGGA+AGG | 0.489629 | 8_1:-13790943 | None:intergenic |
| TGAAGAATGCTTCACATAAA+CGG | 0.492391 | 8_1:+13791612 | Msa1180050:CDS |
| TCTTCATTGATTTCGAGATA+AGG | 0.495633 | 8_1:-13791656 | None:intergenic |
| GAATCCAGAATTGGGTTATG+AGG | 0.496062 | 8_1:+13787131 | Msa1180050:CDS |
| CCACACGCATGCATCTTTCC+AGG | 0.506178 | 8_1:-13788763 | None:intergenic |
| GGCTGATCCTTTAGACTCCC+AGG | 0.510080 | 8_1:+13790228 | Msa1180050:CDS |
| CAATTGGTGAAGTGGCCTCT+AGG | 0.510116 | 8_1:+13790059 | Msa1180050:CDS |
| TCAGCTCTTAAAGCAACAAA+AGG | 0.511836 | 8_1:-13787264 | None:intergenic |
| CCGGATCATGTCACAATTGG+TGG | 0.516445 | 8_1:+13790918 | Msa1180050:CDS |
| CTCTAGAAAATTGCTGAATG+AGG | 0.517438 | 8_1:-13787049 | None:intergenic |
| GCTCATGTTACCATGCTACT+TGG | 0.517522 | 8_1:+13788793 | Msa1180050:CDS |
| AAACATCCAGTTGCAGTCAC+TGG | 0.520491 | 8_1:+13787210 | Msa1180050:CDS |
| TTATCTTCTAAAACATCAGC+AGG | 0.527329 | 8_1:+13791724 | Msa1180050:CDS |
| CATGAAGTGCAGCTCCATAA+GGG | 0.529498 | 8_1:-13791685 | None:intergenic |
| TATCTCGAAATCAATGAAGA+TGG | 0.530795 | 8_1:+13791659 | Msa1180050:CDS |
| CCTCAATCCGCTGTCTCAGT+TGG | 0.531634 | 8_1:-13790974 | None:intergenic |
| TCCAACCAGCAGAGGAAGGA+GGG | 0.531750 | 8_1:+13789954 | Msa1180050:CDS |
| AGGTCTGGTCCAATATTGGC+AGG | 0.534596 | 8_1:+13790079 | Msa1180050:CDS |
| GGTCCAATATTGGCAGGAAG+TGG | 0.538609 | 8_1:+13790085 | Msa1180050:CDS |
| CATCAGCAGGATATTGTACC+TGG | 0.540608 | 8_1:+13791737 | Msa1180050:CDS |
| CCAAGCATGAAGAAGTATCC+AGG | 0.546741 | 8_1:-13791587 | None:intergenic |
| GTTTAAAACTTAGGAAATGG+TGG | 0.554059 | 8_1:+13788717 | Msa1180050:intron |
| AGCTTTCTTTAGAAAAGGCT+CGG | 0.555043 | 8_1:-13790947 | None:intergenic |
| TAATTTGCCTGGGAGTCTAA+AGG | 0.559413 | 8_1:-13790235 | None:intergenic |
| TGTGAAGAATTATGAGATGA+AGG | 0.560370 | 8_1:-13786910 | None:intergenic |
| CCAACTGAGACAGCGGATTG+AGG | 0.561040 | 8_1:+13790974 | Msa1180050:CDS |
| TGACTTACCAATTGGTGAAG+TGG | 0.570836 | 8_1:+13790051 | Msa1180050:CDS |
| CATTCACAAAATGTTCATGC+AGG | 0.577020 | 8_1:-13791472 | None:intergenic |
| CAACCAGCAGAGGAAGGAGG+GGG | 0.578635 | 8_1:+13789956 | Msa1180050:CDS |
| AGGTCACCATTGTTTACAGT+TGG | 0.583641 | 8_1:-13791452 | None:intergenic |
| GCTCTTAAAGCAACAAAAGG+AGG | 0.585596 | 8_1:-13787261 | None:intergenic |
| GCAACACCTTGTTTCTCGCG+AGG | 0.588370 | 8_1:+13790207 | Msa1180050:CDS |
| ATGACAAAATTTGTGTTGCA+GGG | 0.590763 | 8_1:-13787011 | None:intergenic |
| CCAACCAGCAGAGGAAGGAG+GGG | 0.591236 | 8_1:+13789955 | Msa1180050:CDS |
| TATCCTCCAACTGTAAACAA+TGG | 0.592228 | 8_1:+13791446 | Msa1180050:CDS |
| GATCAGCCTCGCGAGAAACA+AGG | 0.594248 | 8_1:-13790213 | None:intergenic |
| AGACTTCTCATTCTATCAAG+AGG | 0.600460 | 8_1:+13791559 | Msa1180050:CDS |
| TTCCAACCAGCAGAGGAAGG+AGG | 0.601581 | 8_1:+13789953 | Msa1180050:CDS |
| AATGTTGCGGTGAATATGCT+TGG | 0.603714 | 8_1:+13791491 | Msa1180050:CDS |
| GAATTTGAAGGAAGAAGACA+TGG | 0.604764 | 8_1:-13786950 | None:intergenic |
| TTGCAAGCTAATAATCGCAC+CGG | 0.606405 | 8_1:-13790188 | None:intergenic |
| CTTTGCAGCACCAAGTAGCA+TGG | 0.607237 | 8_1:-13788803 | None:intergenic |
| GTGACGATTGCAAAGATCCA+AGG | 0.614161 | 8_1:+13790873 | Msa1180050:CDS |
| GCTTTAACCAACTGAGACAG+CGG | 0.615430 | 8_1:+13790967 | Msa1180050:CDS |
| AAACTTAGGAAATGGTGGAG+TGG | 0.617389 | 8_1:+13788722 | Msa1180050:intron |
| TTGGACAAGCTGCTGTGCAT+AGG | 0.618002 | 8_1:+13791381 | Msa1180050:CDS |
| GAGCACAAGAGTAAAGTACC+TGG | 0.618593 | 8_1:+13788745 | Msa1180050:CDS |
| CACCGGAAGCTGCTAATATG+GGG | 0.622033 | 8_1:-13790171 | None:intergenic |
| ATGGGGTCTATAGATTGTTG+AGG | 0.630727 | 8_1:-13790154 | None:intergenic |
| GCATAGGTGCAATGCAACTG+TGG | 0.658051 | 8_1:+13791397 | Msa1180050:CDS |
| CAATATTGGACCAGACCTAG+AGG | 0.660996 | 8_1:-13790074 | None:intergenic |
| AGAGAGTGCCAAAAGTCCTG+AGG | 0.663163 | 8_1:+13787068 | Msa1180050:CDS |
| TGGTTGGAAAACAAGAACAA+TGG | 0.673758 | 8_1:-13789939 | None:intergenic |
| ACTGAGACAGCGGATTGAGG+AGG | 0.686390 | 8_1:+13790977 | Msa1180050:CDS |
| CCTGGAAAGATGCATGCGTG+TGG | 0.730006 | 8_1:+13788763 | Msa1180050:CDS |
| ACGATTGCAAAGATCCAAGG+AGG | 0.737015 | 8_1:+13790876 | Msa1180050:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTAATATAATGATAAAAAAA+TGG | - | chr8_1:13786984-13787003 | None:intergenic | 10.0% |
| !!! | TAAGAAAATATTCTTTTTTT+AGG | - | chr8_1:13787888-13787907 | None:intergenic | 10.0% |
| !!! | TTTTTTTTAAGATGAAGATT+AGG | - | chr8_1:13786844-13786863 | None:intergenic | 15.0% |
| !! | TATTATGATCTATTATGATT+TGG | - | chr8_1:13787574-13787593 | None:intergenic | 15.0% |
| !!! | TAAGAAAAGATTCTTTTTTT+AGG | + | chr8_1:13787799-13787818 | Msa1180050:intron | 15.0% |
| !! | TTTATTAGAAGAAAAAAATG+TGG | - | chr8_1:13788191-13788210 | None:intergenic | 15.0% |
| !! | AAAAGATCATATATACTATA+GGG | - | chr8_1:13788578-13788597 | None:intergenic | 15.0% |
| !! | TAAAAGATCATATATACTAT+AGG | - | chr8_1:13788579-13788598 | None:intergenic | 15.0% |
| !!! | TGACTTTTTATTTTGTTTTA+TGG | + | chr8_1:13788606-13788625 | Msa1180050:intron | 15.0% |
| !!! | GACTTTTTATTTTGTTTTAT+GGG | + | chr8_1:13788607-13788626 | Msa1180050:intron | 15.0% |
| !!! | TAATATCATATTTCTACAAA+GGG | + | chr8_1:13788637-13788656 | Msa1180050:intron | 15.0% |
| !!! | AAACTCTAATTTTTTATCTA+TGG | - | chr8_1:13791829-13791848 | None:intergenic | 15.0% |
| !! | AATTTCAGTTAAAAAAGTGA+TGG | - | chr8_1:13787650-13787669 | None:intergenic | 20.0% |
| !! | AAATGTTGGATATATAAAAG+AGG | - | chr8_1:13788502-13788521 | None:intergenic | 20.0% |
| !! | TTATGAATTGGTAAAAATGT+TGG | - | chr8_1:13788516-13788535 | None:intergenic | 20.0% |
| !!! | GTATATATGATCTTTTATGA+TGG | + | chr8_1:13788582-13788601 | Msa1180050:intron | 20.0% |
| !!! | CTAATATCATATTTCTACAA+AGG | + | chr8_1:13788636-13788655 | Msa1180050:intron | 20.0% |
| !! | TGATATGAATTAAAAATGTG+TGG | + | chr8_1:13789089-13789108 | Msa1180050:intron | 20.0% |
| !!! | TCTTTTAGTTAGTATCAAAA+TGG | - | chr8_1:13789607-13789626 | None:intergenic | 20.0% |
| !!! | TTTTGATACTAACTAAAAGA+AGG | + | chr8_1:13789607-13789626 | Msa1180050:intron | 20.0% |
| !! | TTTGATACTAACTAAAAGAA+GGG | + | chr8_1:13789608-13789627 | Msa1180050:intron | 20.0% |
| !!! | TTCTTTGAAGCAAAAATAAA+TGG | + | chr8_1:13790109-13790128 | Msa1180050:CDS | 20.0% |
| !! | TATGAAATAAGTGTAATAAG+TGG | - | chr8_1:13790286-13790305 | None:intergenic | 20.0% |
| !! | ATTACACTTATTTCATACTT+AGG | + | chr8_1:13790289-13790308 | Msa1180050:intron | 20.0% |
| !! | TTGTAATTAAAAGTGAAAAC+AGG | - | chr8_1:13791291-13791310 | None:intergenic | 20.0% |
| !!! | TAATTTTTTATCTATGGCTA+AGG | - | chr8_1:13791823-13791842 | None:intergenic | 20.0% |
| !! | AAATTAATGCTGATATTACT+TGG | + | chr8_1:13791957-13791976 | Msa1180050:three_prime_UTR | 20.0% |
| !!! | TTTTTAAGATGAAGATTAGG+TGG | - | chr8_1:13786841-13786860 | None:intergenic | 25.0% |
| ! | ATGGTAACATATGAATTTGA+AGG | - | chr8_1:13786965-13786984 | None:intergenic | 25.0% |
| ! | ATTGGATGATCAATATTAGA+AGG | + | chr8_1:13787097-13787116 | Msa1180050:CDS | 25.0% |
| ! | TTGAAGAGAGTAATAGTTTA+AGG | - | chr8_1:13787327-13787346 | None:intergenic | 25.0% |
| !!! | TATTTTCTTACATTTGAGAC+CGG | + | chr8_1:13787898-13787917 | Msa1180050:intron | 25.0% |
| ! | GAAGAAAAAAATGTGGAAAA+GGG | - | chr8_1:13788184-13788203 | None:intergenic | 25.0% |
| ! | AGAAGAAAAAAATGTGGAAA+AGG | - | chr8_1:13788185-13788204 | None:intergenic | 25.0% |
| ! | TTCTACGTAATGTTAATGTT+AGG | + | chr8_1:13788252-13788271 | Msa1180050:intron | 25.0% |
| ! | TCTACGTAATGTTAATGTTA+GGG | + | chr8_1:13788253-13788272 | Msa1180050:intron | 25.0% |
| !! | TCATCTCATGTTTAAAACTT+AGG | + | chr8_1:13788708-13788727 | Msa1180050:intron | 25.0% |
| !! | CATGTTTAAAACTTAGGAAA+TGG | + | chr8_1:13788714-13788733 | Msa1180050:intron | 25.0% |
| !!! | TGTCTTAGCTTCTTATTTTT+CGG | + | chr8_1:13788871-13788890 | Msa1180050:intron | 25.0% |
| ! | TTATATTCTGCTTAAACAAG+TGG | + | chr8_1:13788918-13788937 | Msa1180050:intron | 25.0% |
| ! | TTAGTTAAAGTTGAATCGAT+CGG | + | chr8_1:13788964-13788983 | Msa1180050:intron | 25.0% |
| ! | TTAATTCATATCAGAATCTC+AGG | - | chr8_1:13789082-13789101 | None:intergenic | 25.0% |
| !! | AAAAGTATGAAATCATCACA+AGG | - | chr8_1:13789160-13789179 | None:intergenic | 25.0% |
| !! | ATGTTTCACTTTGACATTTT+TGG | - | chr8_1:13789199-13789218 | None:intergenic | 25.0% |
| ! | AAGTGAAACATATATCTCTT+TGG | + | chr8_1:13789208-13789227 | Msa1180050:intron | 25.0% |
| ! | TAATTTACAAAACTTGCATC+AGG | - | chr8_1:13789274-13789293 | None:intergenic | 25.0% |
| !!! | ATGCAAGTTTTGTAAATTAC+AGG | + | chr8_1:13789275-13789294 | Msa1180050:intron | 25.0% |
| ! | TCATCTATCATATATCTCTT+TGG | + | chr8_1:13789305-13789324 | Msa1180050:intron | 25.0% |
| ! | AGAAGTTAAGATCATCAAAA+GGG | - | chr8_1:13789455-13789474 | None:intergenic | 25.0% |
| ! | AAGAAGTTAAGATCATCAAA+AGG | - | chr8_1:13789456-13789475 | None:intergenic | 25.0% |
| ! | ATTACAATACTTCTATCATC+TGG | + | chr8_1:13789510-13789529 | Msa1180050:intron | 25.0% |
| ! | GAGAGAAAAACATTACAAAA+TGG | - | chr8_1:13789556-13789575 | None:intergenic | 25.0% |
| !!! | TCTTTATTTTGTTGTCTGAA+AGG | + | chr8_1:13789913-13789932 | Msa1180050:intron | 25.0% |
| !!! | CTTTATTTTGTTGTCTGAAA+GGG | + | chr8_1:13789914-13789933 | Msa1180050:intron | 25.0% |
| !! | CTAAGAAAATTTTAGATGCT+GGG | + | chr8_1:13789984-13790003 | Msa1180050:CDS | 25.0% |
| !! | TAAGAAAATTTTAGATGCTG+GGG | + | chr8_1:13789985-13790004 | Msa1180050:CDS | 25.0% |
| ! | TGAAGCAAAAATAAATGGAA+AGG | + | chr8_1:13790114-13790133 | Msa1180050:CDS | 25.0% |
| ! | GAAGCAAAAATAAATGGAAA+GGG | + | chr8_1:13790115-13790134 | Msa1180050:CDS | 25.0% |
| !! | AATGTAAGAATAATTTGCCT+GGG | - | chr8_1:13790248-13790267 | None:intergenic | 25.0% |
| !! | AAATGTAAGAATAATTTGCC+TGG | - | chr8_1:13790249-13790268 | None:intergenic | 25.0% |
| ! | TAATAAGTGGATAATAGGAA+GGG | - | chr8_1:13790273-13790292 | None:intergenic | 25.0% |
| ! | AAGTGTAATAAGTGGATAAT+AGG | - | chr8_1:13790278-13790297 | None:intergenic | 25.0% |
| ! | CAAGTAAATAAGATACTGTT+TGG | - | chr8_1:13790520-13790539 | None:intergenic | 25.0% |
| ! | TTTCAAACAATGATGATTCT+TGG | - | chr8_1:13790773-13790792 | None:intergenic | 25.0% |
| ! | TAATGCATTCAATGTTATTC+CGG | + | chr8_1:13790899-13790918 | Msa1180050:CDS | 25.0% |
| !! | GTTAAAGCTTTCTTTAGAAA+AGG | - | chr8_1:13790955-13790974 | None:intergenic | 25.0% |
| ! | AAAAACAATAGAGAAATGTG+TGG | - | chr8_1:13791888-13791907 | None:intergenic | 25.0% |
| TGTGAAGAATTATGAGATGA+AGG | - | chr8_1:13786913-13786932 | None:intergenic | 30.0% | |
| ATGACAAAATTTGTGTTGCA+GGG | - | chr8_1:13787014-13787033 | None:intergenic | 30.0% | |
| ATTCATGAGAATCCAGAATT+GGG | + | chr8_1:13787123-13787142 | Msa1180050:CDS | 30.0% | |
| TGAATTGATAAGAGCAGAAT+TGG | + | chr8_1:13787167-13787186 | Msa1180050:CDS | 30.0% | |
| ! | TGAAAATCCGTCAATTTTGT+CGG | + | chr8_1:13787395-13787414 | Msa1180050:intron | 30.0% |
| CTTGAGAAGAGATTATAAAG+AGG | + | chr8_1:13787470-13787489 | Msa1180050:intron | 30.0% | |
| ! | TCTTTTCTTACATATGAGAC+CGG | - | chr8_1:13787789-13787808 | None:intergenic | 30.0% |
| AAAAATGTGGAAAAGGGATA+AGG | - | chr8_1:13788178-13788197 | None:intergenic | 30.0% | |
| CTACGTAATGTTAATGTTAG+GGG | + | chr8_1:13788254-13788273 | Msa1180050:intron | 30.0% | |
| !!! | AGATGTTTTGGTGATTTGTA+TGG | - | chr8_1:13788312-13788331 | None:intergenic | 30.0% |
| ! | ATCAGAGTGATAAGATGTTT+TGG | - | chr8_1:13788324-13788343 | None:intergenic | 30.0% |
| TCATATATACTATAGGGTGT+TGG | - | chr8_1:13788572-13788591 | None:intergenic | 30.0% | |
| ! | GTTTAAAACTTAGGAAATGG+TGG | + | chr8_1:13788717-13788736 | Msa1180050:intron | 30.0% |
| TAGTTAAAGTTGAATCGATC+GGG | + | chr8_1:13788965-13788984 | Msa1180050:intron | 30.0% | |
| TTGTAGAGTTAATGACACTT+TGG | - | chr8_1:13789130-13789149 | None:intergenic | 30.0% | |
| TGTAGCATATTACCAAATTG+TGG | + | chr8_1:13789233-13789252 | Msa1180050:intron | 30.0% | |
| GTAGCATATTACCAAATTGT+GGG | + | chr8_1:13789234-13789253 | Msa1180050:intron | 30.0% | |
| TAGCATATTACCAAATTGTG+GGG | + | chr8_1:13789235-13789254 | Msa1180050:intron | 30.0% | |
| GATATAATTTCCCCACAATT+TGG | - | chr8_1:13789248-13789267 | None:intergenic | 30.0% | |
| !! | CATTGGAAAAGAAGTATCTA+AGG | - | chr8_1:13789375-13789394 | None:intergenic | 30.0% |
| ! | CTTTGATTCAAGTTTGACAT+TGG | - | chr8_1:13789392-13789411 | None:intergenic | 30.0% |
| ! | TCAAAATCTTGCTTAGTTCT+TGG | + | chr8_1:13789574-13789593 | Msa1180050:intron | 30.0% |
| ACATGTCAGTATTAATATCG+TGG | + | chr8_1:13789809-13789828 | Msa1180050:intron | 30.0% | |
| ! | TACTTTTCTCAGTATTGTCT+TGG | + | chr8_1:13789860-13789879 | Msa1180050:intron | 30.0% |
| ! | GCTAAGAAAATTTTAGATGC+TGG | + | chr8_1:13789983-13790002 | Msa1180050:CDS | 30.0% |
| GTAATAAGTGGATAATAGGA+AGG | - | chr8_1:13790274-13790293 | None:intergenic | 30.0% | |
| ! | TTTCATACTTAGGCTCTTTT+TGG | + | chr8_1:13790299-13790318 | Msa1180050:intron | 30.0% |
| AAGATCTCTTGTAAAGCTTT+CGG | + | chr8_1:13790440-13790459 | Msa1180050:intron | 30.0% | |
| GTAAATAAGATACTGTTTGG+AGG | - | chr8_1:13790517-13790536 | None:intergenic | 30.0% | |
| ATTATGTAAGCAAGACAAGA+GGG | - | chr8_1:13790836-13790855 | None:intergenic | 30.0% | |
| AATTATGTAAGCAAGACAAG+AGG | - | chr8_1:13790837-13790856 | None:intergenic | 30.0% | |
| CAGGTTTAACAATCAAAGTA+AGG | - | chr8_1:13791113-13791132 | None:intergenic | 30.0% | |
| TCATTTATGCAGGTTATCAT+TGG | + | chr8_1:13791362-13791381 | Msa1180050:intron | 30.0% | |
| TTTACAGTTGGAGGATAAAA+AGG | - | chr8_1:13791443-13791462 | None:intergenic | 30.0% | |
| ! | TGAACATTTTGTGAATGTTG+CGG | + | chr8_1:13791478-13791497 | Msa1180050:CDS | 30.0% |
| TGAAGAATGCTTCACATAAA+CGG | + | chr8_1:13791612-13791631 | Msa1180050:CDS | 30.0% | |
| !! | TCTTCATTGATTTCGAGATA+AGG | - | chr8_1:13791659-13791678 | None:intergenic | 30.0% |
| TATCTCGAAATCAATGAAGA+TGG | + | chr8_1:13791659-13791678 | Msa1180050:CDS | 30.0% | |
| !! | TTATCTTCTAAAACATCAGC+AGG | + | chr8_1:13791724-13791743 | Msa1180050:CDS | 30.0% |
| !!! | GAAGAAGACATGGTTTGTTT+TGG | - | chr8_1:13786943-13786962 | None:intergenic | 35.0% |
| GAATTTGAAGGAAGAAGACA+TGG | - | chr8_1:13786953-13786972 | None:intergenic | 35.0% | |
| GATGACAAAATTTGTGTTGC+AGG | - | chr8_1:13787015-13787034 | None:intergenic | 35.0% | |
| ! | CTCTAGAAAATTGCTGAATG+AGG | - | chr8_1:13787052-13787071 | None:intergenic | 35.0% |
| ! | ATCAAAAACCTCAGGACTTT+TGG | - | chr8_1:13787079-13787098 | None:intergenic | 35.0% |
| ! | AAAGTCCTGAGGTTTTTGAT+TGG | + | chr8_1:13787079-13787098 | Msa1180050:CDS | 35.0% |
| ATCATCCAATCAAAAACCTC+AGG | - | chr8_1:13787087-13787106 | None:intergenic | 35.0% | |
| GATTCATGAGAATCCAGAAT+TGG | + | chr8_1:13787122-13787141 | Msa1180050:CDS | 35.0% | |
| AATTCCTCATAACCCAATTC+TGG | - | chr8_1:13787138-13787157 | None:intergenic | 35.0% | |
| ACTGCAACTGGATGTTTATA+AGG | - | chr8_1:13787207-13787226 | None:intergenic | 35.0% | |
| TCAGCTCTTAAAGCAACAAA+AGG | - | chr8_1:13787267-13787286 | None:intergenic | 35.0% | |
| !! | TGTTGCTTTAAGAGCTGATA+TGG | + | chr8_1:13787269-13787288 | Msa1180050:CDS | 35.0% |
| GAATCCTATCTATCCAATGT+GGG | - | chr8_1:13787451-13787470 | None:intergenic | 35.0% | |
| AGAATCCTATCTATCCAATG+TGG | - | chr8_1:13787452-13787471 | None:intergenic | 35.0% | |
| GAGAAGAGATTATAAAGAGG+AGG | + | chr8_1:13787473-13787492 | Msa1180050:intron | 35.0% | |
| CTAACTCATCCATACAAAAC+CGG | - | chr8_1:13787517-13787536 | None:intergenic | 35.0% | |
| ! | TTCCAGCTTCACATTTTTCA+CGG | - | chr8_1:13787694-13787713 | None:intergenic | 35.0% |
| AAGCTGGAAATTGTAGAGTT+TGG | + | chr8_1:13787705-13787724 | Msa1180050:intron | 35.0% | |
| ! | ATTATGTAAAGTACTCCCTC+CGG | - | chr8_1:13787920-13787939 | None:intergenic | 35.0% |
| ATTTGTATGGAGCAACATAG+AGG | - | chr8_1:13788299-13788318 | None:intergenic | 35.0% | |
| !! | TCTTGTGGTTCTAAAGCATT+TGG | - | chr8_1:13788425-13788444 | None:intergenic | 35.0% |
| ! | ACGTAATGCCTTAAGGTTTT+GGG | - | chr8_1:13788469-13788488 | None:intergenic | 35.0% |
| ! | TACGTAATGCCTTAAGGTTT+TGG | - | chr8_1:13788470-13788489 | None:intergenic | 35.0% |
| CTCATATACGTAATGCCTTA+AGG | - | chr8_1:13788476-13788495 | None:intergenic | 35.0% | |
| ATCTCACATCGCTTATGAAT+TGG | - | chr8_1:13788528-13788547 | None:intergenic | 35.0% | |
| ACAGCATGAAAAAGAGATAC+AGG | + | chr8_1:13788834-13788853 | Msa1180050:CDS | 35.0% | |
| TGTCAGTATTAATATCGTGG+CGG | + | chr8_1:13789812-13789831 | Msa1180050:intron | 35.0% | |
| ACTGACATGTTAAACAGACA+TGG | - | chr8_1:13789841-13789860 | None:intergenic | 35.0% | |
| GAATTTATCAGTAATCCACG+AGG | - | chr8_1:13789895-13789914 | None:intergenic | 35.0% | |
| TGGTTGGAAAACAAGAACAA+TGG | - | chr8_1:13789942-13789961 | None:intergenic | 35.0% | |
| GAAAATGTCACTGCTATCTT+TGG | + | chr8_1:13790013-13790032 | Msa1180050:CDS | 35.0% | |
| GCAAAAATAAATGGAAAGGG+AGG | + | chr8_1:13790118-13790137 | Msa1180050:CDS | 35.0% | |
| CTGATTGCTTAGCATAGTTA+TGG | - | chr8_1:13790577-13790596 | None:intergenic | 35.0% | |
| AGACTATTAAGAGCCTAAGT+AGG | + | chr8_1:13790656-13790675 | Msa1180050:intron | 35.0% | |
| TTATGTAAGCAAGACAAGAG+GGG | - | chr8_1:13790835-13790854 | None:intergenic | 35.0% | |
| ! | AGCTTTCTTTAGAAAAGGCT+CGG | - | chr8_1:13790950-13790969 | None:intergenic | 35.0% |
| ! | AAGCTGATGATGCATACTAT+AGG | - | chr8_1:13791068-13791087 | None:intergenic | 35.0% |
| TACGTACAATCAAGCTAATC+AGG | - | chr8_1:13791132-13791151 | None:intergenic | 35.0% | |
| CGTAAAGTTAACTCAGAAAC+AGG | + | chr8_1:13791148-13791167 | Msa1180050:intron | 35.0% | |
| TCAAGTCGTTTATCCAAACA+AGG | + | chr8_1:13791327-13791346 | Msa1180050:intron | 35.0% | |
| TGCATAAATGAATCAGTCCT+AGG | - | chr8_1:13791353-13791372 | None:intergenic | 35.0% | |
| ! | TAGGACTGATTCATTTATGC+AGG | + | chr8_1:13791352-13791371 | Msa1180050:intron | 35.0% |
| AAAAAGGTTTCACTCCATGA+AGG | - | chr8_1:13791427-13791446 | None:intergenic | 35.0% | |
| TATCCTCCAACTGTAAACAA+TGG | + | chr8_1:13791446-13791465 | Msa1180050:CDS | 35.0% | |
| CATTCACAAAATGTTCATGC+AGG | - | chr8_1:13791475-13791494 | None:intergenic | 35.0% | |
| TAGTGTCATGACACCATTTA+TGG | + | chr8_1:13791529-13791548 | Msa1180050:CDS | 35.0% | |
| AGTGTCATGACACCATTTAT+GGG | + | chr8_1:13791530-13791549 | Msa1180050:CDS | 35.0% | |
| AAGTCTTCAGATCCCATAAA+TGG | - | chr8_1:13791545-13791564 | None:intergenic | 35.0% | |
| AGACTTCTCATTCTATCAAG+AGG | + | chr8_1:13791559-13791578 | Msa1180050:CDS | 35.0% | |
| ! | TGATATTTTCTCTCAACACC+AGG | - | chr8_1:13791758-13791777 | None:intergenic | 35.0% |
| ! | AGTTTTCACTACATACTCTG+TGG | + | chr8_1:13791844-13791863 | Msa1180050:three_prime_UTR | 35.0% |
| TAAGATGAAGATTAGGTGGC+TGG | - | chr8_1:13786837-13786856 | None:intergenic | 40.0% | |
| !!! | GAAGACATGGTTTGTTTTGG+TGG | - | chr8_1:13786940-13786959 | None:intergenic | 40.0% |
| GAATCCAGAATTGGGTTATG+AGG | + | chr8_1:13787131-13787150 | Msa1180050:CDS | 40.0% | |
| GCTCTTAAAGCAACAAAAGG+AGG | - | chr8_1:13787264-13787283 | None:intergenic | 40.0% | |
| TATGGATGCTCTTTCTATGC+AGG | + | chr8_1:13787287-13787306 | Msa1180050:CDS | 40.0% | |
| GCTAACACCGACAAAATTGA+CGG | - | chr8_1:13787405-13787424 | None:intergenic | 40.0% | |
| !!! | GTCAATTTTGTCGGTGTTAG+CGG | + | chr8_1:13787404-13787423 | Msa1180050:intron | 40.0% |
| TAGTCCCACATTGGATAGAT+AGG | + | chr8_1:13787444-13787463 | Msa1180050:intron | 40.0% | |
| !! | CGGTTTTGTATGGATGAGTT+AGG | + | chr8_1:13787515-13787534 | Msa1180050:intron | 40.0% |
| ! | TTTTCACGGTGGAAATGCAT+TGG | - | chr8_1:13787680-13787699 | None:intergenic | 40.0% |
| TTGTAGAGTTTGGCAAAACG+TGG | + | chr8_1:13787715-13787734 | Msa1180050:intron | 40.0% | |
| ! | AGTTTGGCAAAACGTGGTTT+TGG | + | chr8_1:13787721-13787740 | Msa1180050:intron | 40.0% |
| TTCTTACATATGAGACCGGA+GGG | - | chr8_1:13787785-13787804 | None:intergenic | 40.0% | |
| TTTCTTACATATGAGACCGG+AGG | - | chr8_1:13787786-13787805 | None:intergenic | 40.0% | |
| ! | TTTCTTACATTTGAGACCGG+AGG | + | chr8_1:13787901-13787920 | Msa1180050:intron | 40.0% |
| ! | TTCTTACATTTGAGACCGGA+GGG | + | chr8_1:13787902-13787921 | Msa1180050:intron | 40.0% |
| TTGCCTTCCCCTATGTATAT+TGG | + | chr8_1:13788366-13788385 | Msa1180050:intron | 40.0% | |
| TGCCTTCCCCTATGTATATT+GGG | + | chr8_1:13788367-13788386 | Msa1180050:intron | 40.0% | |
| TGACTCCCCAATATACATAG+GGG | - | chr8_1:13788376-13788395 | None:intergenic | 40.0% | |
| CTGACTCCCCAATATACATA+GGG | - | chr8_1:13788377-13788396 | None:intergenic | 40.0% | |
| !! | ATGCTTTAGAACCACAAGAG+AGG | + | chr8_1:13788426-13788445 | Msa1180050:intron | 40.0% |
| !! | TGCTTTAGAACCACAAGAGA+GGG | + | chr8_1:13788427-13788446 | Msa1180050:intron | 40.0% |
| !!! | TAATGCCTTAAGGTTTTGGG+TGG | - | chr8_1:13788466-13788485 | None:intergenic | 40.0% |
| ! | AAACTTAGGAAATGGTGGAG+TGG | + | chr8_1:13788722-13788741 | Msa1180050:intron | 40.0% |
| ! | AACTTAGGAAATGGTGGAGT+GGG | + | chr8_1:13788723-13788742 | Msa1180050:intron | 40.0% |
| TCCATGGCTGGAATAATTCA+TGG | + | chr8_1:13789003-13789022 | Msa1180050:intron | 40.0% | |
| TAAACCCTCCCAGTTTCTAT+GGG | - | chr8_1:13789032-13789051 | None:intergenic | 40.0% | |
| CACTTTGGACAATAGAGAAG+TGG | - | chr8_1:13789115-13789134 | None:intergenic | 40.0% | |
| ! | GCACTGACACTTCAGATTAA+AGG | + | chr8_1:13789712-13789731 | Msa1180050:intron | 40.0% |
| TTTATCAGTAATCCACGAGG+AGG | - | chr8_1:13789892-13789911 | None:intergenic | 40.0% | |
| ATTGCTCCTGACTTACCAAT+TGG | + | chr8_1:13790043-13790062 | Msa1180050:CDS | 40.0% | |
| ACTTCACCAATTGGTAAGTC+AGG | - | chr8_1:13790052-13790071 | None:intergenic | 40.0% | |
| TGACTTACCAATTGGTGAAG+TGG | + | chr8_1:13790051-13790070 | Msa1180050:CDS | 40.0% | |
| ATGGGGTCTATAGATTGTTG+AGG | - | chr8_1:13790157-13790176 | None:intergenic | 40.0% | |
| TTGCAAGCTAATAATCGCAC+CGG | - | chr8_1:13790191-13790210 | None:intergenic | 40.0% | |
| ! | TAATTTGCCTGGGAGTCTAA+AGG | - | chr8_1:13790238-13790257 | None:intergenic | 40.0% |
| GAGCTAATGTAAACAGCTCA+TGG | - | chr8_1:13790495-13790514 | None:intergenic | 40.0% | |
| CCACAAATAGGTTCCTACTT+AGG | - | chr8_1:13790672-13790691 | None:intergenic | 40.0% | |
| CCTAAGTAGGAACCTATTTG+TGG | + | chr8_1:13790669-13790688 | Msa1180050:intron | 40.0% | |
| ! | GGTGGAAGTTTTCCACAAAT+AGG | - | chr8_1:13790684-13790703 | None:intergenic | 40.0% |
| ! | TTTTATGCAGAAGAAGCAGG+TGG | - | chr8_1:13790702-13790721 | None:intergenic | 40.0% |
| ! | CCATTTTATGCAGAAGAAGC+AGG | - | chr8_1:13790705-13790724 | None:intergenic | 40.0% |
| CCTGCTTCTTCTGCATAAAA+TGG | + | chr8_1:13790702-13790721 | Msa1180050:intron | 40.0% | |
| ! | ATGAAAGACGTGCTTGTTGA+AGG | + | chr8_1:13790801-13790820 | Msa1180050:intron | 40.0% |
| CATTGAATGCATTACCTCCT+TGG | - | chr8_1:13790893-13790912 | None:intergenic | 40.0% | |
| ATTCCGGATCATGTCACAAT+TGG | + | chr8_1:13790915-13790934 | Msa1180050:CDS | 40.0% | |
| ! | TTCTTTAGAAAAGGCTCGGA+AGG | - | chr8_1:13790946-13790965 | None:intergenic | 40.0% |
| GATGATGCATACTATAGGAG+AGG | - | chr8_1:13791063-13791082 | None:intergenic | 40.0% | |
| CATAACTGAGAGTCATGCAT+TGG | + | chr8_1:13791234-13791253 | Msa1180050:intron | 40.0% | |
| TCACCATTGTTTACAGTTGG+AGG | - | chr8_1:13791452-13791471 | None:intergenic | 40.0% | |
| AGGTCACCATTGTTTACAGT+TGG | - | chr8_1:13791455-13791474 | None:intergenic | 40.0% | |
| AATGTTGCGGTGAATATGCT+TGG | + | chr8_1:13791491-13791510 | Msa1180050:CDS | 40.0% | |
| TTCTATCAAGAGGTCATACC+TGG | + | chr8_1:13791569-13791588 | Msa1180050:CDS | 40.0% | |
| AATGAAGATGGTCTCCCTTA+TGG | + | chr8_1:13791671-13791690 | Msa1180050:CDS | 40.0% | |
| ATCTATGGCTAAGGCAACAT+TGG | - | chr8_1:13791814-13791833 | None:intergenic | 40.0% | |
| AAACATCCAGTTGCAGTCAC+TGG | + | chr8_1:13787210-13787229 | Msa1180050:CDS | 45.0% | |
| !! | ACTGGTGTCATTGGCTTCAT+TGG | + | chr8_1:13787228-13787247 | Msa1180050:CDS | 45.0% |
| !! | GTCATTGGCTTCATTGGAAC+AGG | + | chr8_1:13787234-13787253 | Msa1180050:CDS | 45.0% |
| AATGTGGGACTAAATCCCCT+CGG | - | chr8_1:13787436-13787455 | None:intergenic | 45.0% | |
| !! | CCATACAAAACCGGCTTGTA+TGG | - | chr8_1:13787508-13787527 | None:intergenic | 45.0% |
| !! | CCATACAAGCCGGTTTTGTA+TGG | + | chr8_1:13787505-13787524 | Msa1180050:intron | 45.0% |
| ! | CAGCTTCACATTTTTCACGG+TGG | - | chr8_1:13787691-13787710 | None:intergenic | 45.0% |
| CACCGTGAAAAATGTGAAGC+TGG | + | chr8_1:13787689-13787708 | Msa1180050:intron | 45.0% | |
| !!! | TTGGCAAAACGTGGTTTTGG+TGG | + | chr8_1:13787724-13787743 | Msa1180050:intron | 45.0% |
| !!! | TGGCAAAACGTGGTTTTGGT+GGG | + | chr8_1:13787725-13787744 | Msa1180050:intron | 45.0% |
| GCCTTCCCCTATGTATATTG+GGG | + | chr8_1:13788368-13788387 | Msa1180050:intron | 45.0% | |
| TCCCCAATATACATAGGGGA+AGG | - | chr8_1:13788372-13788391 | None:intergenic | 45.0% | |
| CCTGACTCCCCAATATACAT+AGG | - | chr8_1:13788378-13788397 | None:intergenic | 45.0% | |
| CCTATGTATATTGGGGAGTC+AGG | + | chr8_1:13788375-13788394 | Msa1180050:intron | 45.0% | |
| ATGTATATTGGGGAGTCAGG+AGG | + | chr8_1:13788378-13788397 | Msa1180050:intron | 45.0% | |
| CATCTCCACCCAAAACCTTA+AGG | + | chr8_1:13788458-13788477 | Msa1180050:intron | 45.0% | |
| ! | GAGCACAAGAGTAAAGTACC+TGG | + | chr8_1:13788745-13788764 | Msa1180050:CDS | 45.0% |
| GCTCATGTTACCATGCTACT+TGG | + | chr8_1:13788793-13788812 | Msa1180050:CDS | 45.0% | |
| AACAAGTGGCTTGACTCAGT+TGG | + | chr8_1:13788932-13788951 | Msa1180050:intron | 45.0% | |
| !! | GAGCACTCGAGTTTTATCCA+TGG | + | chr8_1:13788987-13789006 | Msa1180050:intron | 45.0% |
| !! | ACTCGAGTTTTATCCATGGC+TGG | + | chr8_1:13788991-13789010 | Msa1180050:intron | 45.0% |
| GCCATGAATTATTCCAGCCA+TGG | - | chr8_1:13789007-13789026 | None:intergenic | 45.0% | |
| CTAAACCCTCCCAGTTTCTA+TGG | - | chr8_1:13789033-13789052 | None:intergenic | 45.0% | |
| ! | CTGAAGTGTCAGTGCTACAT+AGG | - | chr8_1:13789707-13789726 | None:intergenic | 45.0% |
| !!! | TCTTGTTTTCCAACCAGCAG+AGG | + | chr8_1:13789946-13789965 | Msa1180050:CDS | 45.0% |
| CAATATTGGACCAGACCTAG+AGG | - | chr8_1:13790077-13790096 | None:intergenic | 45.0% | |
| CTCTAGGTCTGGTCCAATAT+TGG | + | chr8_1:13790075-13790094 | Msa1180050:CDS | 45.0% | |
| AAGCCACTTCCTGCCAATAT+TGG | - | chr8_1:13790091-13790110 | None:intergenic | 45.0% | |
| TACATAATTCATGCTCCCGC+AGG | + | chr8_1:13790848-13790867 | Msa1180050:intron | 45.0% | |
| TTTGCAATCGTCACAACCTG+CGG | - | chr8_1:13790867-13790886 | None:intergenic | 45.0% | |
| GTGACGATTGCAAAGATCCA+AGG | + | chr8_1:13790873-13790892 | Msa1180050:CDS | 45.0% | |
| ACGATTGCAAAGATCCAAGG+AGG | + | chr8_1:13790876-13790895 | Msa1180050:CDS | 45.0% | |
| CCACCAATTGTGACATGATC+CGG | - | chr8_1:13790921-13790940 | None:intergenic | 45.0% | |
| GCTTTAACCAACTGAGACAG+CGG | + | chr8_1:13790967-13790986 | Msa1180050:CDS | 45.0% | |
| ! | CGGATTGAGGAGGTATGTAT+TGG | + | chr8_1:13790987-13791006 | Msa1180050:intron | 45.0% |
| ! | ACTGAGAGTCATGCATTGGT+TGG | + | chr8_1:13791238-13791257 | Msa1180050:intron | 45.0% |
| CGTTTATCCAAACAAGGCCT+AGG | + | chr8_1:13791333-13791352 | Msa1180050:intron | 45.0% | |
| !! | AATCAGTCCTAGGCCTTGTT+TGG | - | chr8_1:13791343-13791362 | None:intergenic | 45.0% |
| !! | CCAAGCATGAAGAAGTATCC+AGG | - | chr8_1:13791590-13791609 | None:intergenic | 45.0% |
| CCTGGATACTTCTTCATGCT+TGG | + | chr8_1:13791587-13791606 | Msa1180050:CDS | 45.0% | |
| CATGAAGTGCAGCTCCATAA+GGG | - | chr8_1:13791688-13791707 | None:intergenic | 45.0% | |
| CATCAGCAGGATATTGTACC+TGG | + | chr8_1:13791737-13791756 | Msa1180050:CDS | 45.0% | |
| !! | GAATAATAATAATATAATAA+CGG | - | chr8_1:13789667-13789686 | None:intergenic | 5.0% |
| !! | AGAGAGTGCCAAAAGTCCTG+AGG | + | chr8_1:13787068-13787087 | Msa1180050:CDS | 50.0% |
| ATGACACCAGTGACTGCAAC+TGG | - | chr8_1:13787219-13787238 | None:intergenic | 50.0% | |
| !! | GTTGCAGTCACTGGTGTCAT+TGG | + | chr8_1:13787219-13787238 | Msa1180050:CDS | 50.0% |
| GAGGGGATTTAGTCCCACAT+TGG | + | chr8_1:13787435-13787454 | Msa1180050:intron | 50.0% | |
| !! | CAAAACCGGCTTGTATGGTG+AGG | - | chr8_1:13787503-13787522 | None:intergenic | 50.0% |
| CGCAGCTGTAACGAATATCG+AGG | - | chr8_1:13787541-13787560 | None:intergenic | 50.0% | |
| TATCGGAGGGTTTGCCATCA+CGG | - | chr8_1:13787757-13787776 | None:intergenic | 50.0% | |
| !! | GAGACCGGAGGGAGTATTAT+CGG | - | chr8_1:13787774-13787793 | None:intergenic | 50.0% |
| CTTTGCAGCACCAAGTAGCA+TGG | - | chr8_1:13788806-13788825 | None:intergenic | 50.0% | |
| TCATGGCCACCCATAGAAAC+TGG | + | chr8_1:13789020-13789039 | Msa1180050:intron | 50.0% | |
| CATGGCCACCCATAGAAACT+GGG | + | chr8_1:13789021-13789040 | Msa1180050:intron | 50.0% | |
| ! | GTTTTCCAACCAGCAGAGGA+AGG | + | chr8_1:13789950-13789969 | Msa1180050:CDS | 50.0% |
| CTAGAGGCCACTTCACCAAT+TGG | - | chr8_1:13790061-13790080 | None:intergenic | 50.0% | |
| CAATTGGTGAAGTGGCCTCT+AGG | + | chr8_1:13790059-13790078 | Msa1180050:CDS | 50.0% | |
| AGGTCTGGTCCAATATTGGC+AGG | + | chr8_1:13790079-13790098 | Msa1180050:CDS | 50.0% | |
| GGTCCAATATTGGCAGGAAG+TGG | + | chr8_1:13790085-13790104 | Msa1180050:CDS | 50.0% | |
| GACCCCATATTAGCAGCTTC+CGG | + | chr8_1:13790169-13790188 | Msa1180050:CDS | 50.0% | |
| CACCGGAAGCTGCTAATATG+GGG | - | chr8_1:13790174-13790193 | None:intergenic | 50.0% | |
| GCACCGGAAGCTGCTAATAT+GGG | - | chr8_1:13790175-13790194 | None:intergenic | 50.0% | |
| TTGCAATCGTCACAACCTGC+GGG | - | chr8_1:13790866-13790885 | None:intergenic | 50.0% | |
| CCGGATCATGTCACAATTGG+TGG | + | chr8_1:13790918-13790937 | Msa1180050:CDS | 50.0% | |
| TTGGACAAGCTGCTGTGCAT+AGG | + | chr8_1:13791381-13791400 | Msa1180050:CDS | 50.0% | |
| GCATAGGTGCAATGCAACTG+TGG | + | chr8_1:13791397-13791416 | Msa1180050:CDS | 50.0% | |
| GCAACTGTGGACTTCCTTCA+TGG | + | chr8_1:13791410-13791429 | Msa1180050:CDS | 50.0% | |
| GCATGAAGTGCAGCTCCATA+AGG | - | chr8_1:13791689-13791708 | None:intergenic | 50.0% | |
| ! | GGACTAAATCCCCTCGGTGT+TGG | - | chr8_1:13787430-13787449 | None:intergenic | 55.0% |
| GCACTCCTCACCATACAAGC+CGG | + | chr8_1:13787495-13787514 | Msa1180050:intron | 55.0% | |
| ! | TTGGTGGGTATCCACCGTGA+TGG | + | chr8_1:13787740-13787759 | Msa1180050:intron | 55.0% |
| !! | CCGGAGGGAGTATTATCGGA+GGG | - | chr8_1:13787770-13787789 | None:intergenic | 55.0% |
| CCCTCCGATAATACTCCCTC+CGG | + | chr8_1:13787767-13787786 | Msa1180050:intron | 55.0% | |
| !! | ACCGGAGGGAGTATTATCGG+AGG | - | chr8_1:13787771-13787790 | None:intergenic | 55.0% |
| GGAGCAACATAGAGGCGACA+CGG | - | chr8_1:13788291-13788310 | None:intergenic | 55.0% | |
| !! | AGGAGCGTCGGGAGAAACAA+CGG | + | chr8_1:13788398-13788417 | Msa1180050:intron | 55.0% |
| TGTGTCGTCTCCCTCTCTTG+TGG | - | chr8_1:13788440-13788459 | None:intergenic | 55.0% | |
| CCACACGCATGCATCTTTCC+AGG | - | chr8_1:13788766-13788785 | None:intergenic | 55.0% | |
| CCTGGAAAGATGCATGCGTG+TGG | + | chr8_1:13788763-13788782 | Msa1180050:CDS | 55.0% | |
| GCCACCCATAGAAACTGGGA+GGG | + | chr8_1:13789025-13789044 | Msa1180050:intron | 55.0% | |
| ACCCTCCCAGTTTCTATGGG+TGG | - | chr8_1:13789029-13789048 | None:intergenic | 55.0% | |
| ! | TCTTGGTCTTCACCTCCTCG+TGG | + | chr8_1:13789877-13789896 | Msa1180050:intron | 55.0% |
| TTCCAACCAGCAGAGGAAGG+AGG | + | chr8_1:13789953-13789972 | Msa1180050:CDS | 55.0% | |
| TCCAACCAGCAGAGGAAGGA+GGG | + | chr8_1:13789954-13789973 | Msa1180050:CDS | 55.0% | |
| CGCACCGGAAGCTGCTAATA+TGG | - | chr8_1:13790176-13790195 | None:intergenic | 55.0% | |
| ! | GCAACACCTTGTTTCTCGCG+AGG | + | chr8_1:13790207-13790226 | Msa1180050:CDS | 55.0% |
| GATCAGCCTCGCGAGAAACA+AGG | - | chr8_1:13790216-13790235 | None:intergenic | 55.0% | |
| GGCTGATCCTTTAGACTCCC+AGG | + | chr8_1:13790228-13790247 | Msa1180050:CDS | 55.0% | |
| CCTCAATCCGCTGTCTCAGT+TGG | - | chr8_1:13790977-13790996 | None:intergenic | 55.0% | |
| !! | CCAACTGAGACAGCGGATTG+AGG | + | chr8_1:13790974-13790993 | Msa1180050:CDS | 55.0% |
| !! | ACTGAGACAGCGGATTGAGG+AGG | + | chr8_1:13790977-13790996 | Msa1180050:CDS | 55.0% |
| GTGTTAGCGGCCAACACCGA+GGG | + | chr8_1:13787417-13787436 | Msa1180050:intron | 60.0% | |
| TGTTAGCGGCCAACACCGAG+GGG | + | chr8_1:13787418-13787437 | Msa1180050:intron | 60.0% | |
| !! | GGAGCGTCGGGAGAAACAAC+GGG | + | chr8_1:13788399-13788418 | Msa1180050:intron | 60.0% |
| GGCCACCCATAGAAACTGGG+AGG | + | chr8_1:13789024-13789043 | Msa1180050:intron | 60.0% | |
| CCAACCAGCAGAGGAAGGAG+GGG | + | chr8_1:13789955-13789974 | Msa1180050:CDS | 60.0% | |
| CAACCAGCAGAGGAAGGAGG+GGG | + | chr8_1:13789956-13789975 | Msa1180050:CDS | 60.0% | |
| GGTGAAGTGGCCTCTAGGTC+TGG | + | chr8_1:13790064-13790083 | Msa1180050:CDS | 60.0% | |
| GGTGTTAGCGGCCAACACCG+AGG | + | chr8_1:13787416-13787435 | Msa1180050:intron | 65.0% | |
| CGGAGGGTTTGCCATCACGG+TGG | - | chr8_1:13787754-13787773 | None:intergenic | 65.0% | |
| ! | TGGGGAGTCAGGAGGAGCGT+CGG | + | chr8_1:13788386-13788405 | Msa1180050:intron | 65.0% |
| CCCCTCCTTCCTCTGCTGGT+TGG | - | chr8_1:13789958-13789977 | None:intergenic | 65.0% | |
| CAGCAGAGGAAGGAGGGGGA+GGG | + | chr8_1:13789960-13789979 | Msa1180050:CDS | 65.0% | |
| AGCAGAGGAAGGAGGGGGAG+GGG | + | chr8_1:13789961-13789980 | Msa1180050:CDS | 65.0% | |
| !! | GGGGAGTCAGGAGGAGCGTC+GGG | + | chr8_1:13788387-13788406 | Msa1180050:intron | 70.0% |
| CCTCCCCCTCCTTCCTCTGC+TGG | - | chr8_1:13789962-13789981 | None:intergenic | 70.0% | |
| CCAGCAGAGGAAGGAGGGGG+AGG | + | chr8_1:13789959-13789978 | Msa1180050:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 13786827 | 13792002 | 13786827 | ID=Msa1180050;Name=Msa1180050 |
| chr8_1 | mRNA | 13786827 | 13792002 | 13786827 | ID=Msa1180050-mRNA-1;Parent=Msa1180050;Name=Msa1180050-mRNA-1;_AED=0.36;_eAED=0.36;_QI=125|1|1|1|1|1|5|212|447 |
| chr8_1 | exon | 13786827 | 13787308 | 13786827 | ID=Msa1180050-mRNA-1:exon:5074;Parent=Msa1180050-mRNA-1 |
| chr8_1 | exon | 13788730 | 13788855 | 13788730 | ID=Msa1180050-mRNA-1:exon:5075;Parent=Msa1180050-mRNA-1 |
| chr8_1 | exon | 13789935 | 13790249 | 13789935 | ID=Msa1180050-mRNA-1:exon:5076;Parent=Msa1180050-mRNA-1 |
| chr8_1 | exon | 13790870 | 13790998 | 13790870 | ID=Msa1180050-mRNA-1:exon:5077;Parent=Msa1180050-mRNA-1 |
| chr8_1 | exon | 13791374 | 13792002 | 13791374 | ID=Msa1180050-mRNA-1:exon:5078;Parent=Msa1180050-mRNA-1 |
| chr8_1 | five_prime_UTR | 13786827 | 13786951 | 13786827 | ID=Msa1180050-mRNA-1:five_prime_utr;Parent=Msa1180050-mRNA-1 |
| chr8_1 | CDS | 13786952 | 13787308 | 13786952 | ID=Msa1180050-mRNA-1:cds;Parent=Msa1180050-mRNA-1 |
| chr8_1 | CDS | 13788730 | 13788855 | 13788730 | ID=Msa1180050-mRNA-1:cds;Parent=Msa1180050-mRNA-1 |
| chr8_1 | CDS | 13789935 | 13790249 | 13789935 | ID=Msa1180050-mRNA-1:cds;Parent=Msa1180050-mRNA-1 |
| chr8_1 | CDS | 13790870 | 13790998 | 13790870 | ID=Msa1180050-mRNA-1:cds;Parent=Msa1180050-mRNA-1 |
| chr8_1 | CDS | 13791374 | 13791790 | 13791374 | ID=Msa1180050-mRNA-1:cds;Parent=Msa1180050-mRNA-1 |
| chr8_1 | three_prime_UTR | 13791791 | 13792002 | 13791791 | ID=Msa1180050-mRNA-1:three_prime_utr;Parent=Msa1180050-mRNA-1 |
| Gene Sequence |
| Protein sequence |
