Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1270770 | sp|O04373|ILL4_ARATH | 66.368 | 446 | 142 | 5 | 3 | 447 | 2 | 440 | 0.0 | 602 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1270770 | Q0GXX4 | 95.078 | 447 | 22 | 0 | 1 | 447 | 1 | 447 | 0.0 | 861 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0014410 | Msa1270770 | 0.859180 | 4.943583e-63 | -8.615850e-47 |
| Msa0018470 | Msa1270770 | 0.813187 | 2.905326e-51 | -8.615850e-47 |
| Msa0035290 | Msa1270770 | 0.850336 | 1.813920e-60 | -8.615850e-47 |
| Msa0035400 | Msa1270770 | 0.857629 | 1.433219e-62 | -8.615850e-47 |
| Msa0044180 | Msa1270770 | 0.867576 | 1.236383e-65 | -8.615850e-47 |
| Msa0064550 | Msa1270770 | 0.859882 | 3.040236e-63 | -8.615850e-47 |
| Msa0090860 | Msa1270770 | 0.854666 | 1.057402e-61 | -8.615850e-47 |
| Msa0101170 | Msa1270770 | -0.803402 | 3.547150e-49 | -8.615850e-47 |
| Msa0108070 | Msa1270770 | 0.815687 | 8.137203e-52 | -8.615850e-47 |
| Msa0109490 | Msa1270770 | 0.837674 | 4.522158e-57 | -8.615850e-47 |
| Msa0604880 | Msa1270770 | 0.817420 | 3.328220e-52 | -8.615850e-47 |
| Msa0605250 | Msa1270770 | 0.836131 | 1.120061e-56 | -8.615850e-47 |
| Msa0622250 | Msa1270770 | 0.802585 | 5.230968e-49 | -8.615850e-47 |
| Msa0627050 | Msa1270770 | 0.807466 | 4.985765e-50 | -8.615850e-47 |
| Msa0646190 | Msa1270770 | 0.815609 | 8.468358e-52 | -8.615850e-47 |
| Msa0651310 | Msa1270770 | 0.812891 | 3.375080e-51 | -8.615850e-47 |
| Msa0685890 | Msa1270770 | 0.811509 | 6.756681e-51 | -8.615850e-47 |
| Msa0705420 | Msa1270770 | 0.800788 | 1.222552e-48 | -8.615850e-47 |
| Msa0709660 | Msa1270770 | 0.839751 | 1.313976e-57 | -8.615850e-47 |
| Msa0740210 | Msa1270770 | 0.832735 | 7.979737e-56 | -8.615850e-47 |
| Msa0746980 | Msa1270770 | 0.827460 | 1.545811e-54 | -8.615850e-47 |
| Msa0749150 | Msa1270770 | 0.815870 | 7.405448e-52 | -8.615850e-47 |
| Msa0781390 | Msa1270770 | 0.851422 | 8.967253e-61 | -8.615850e-47 |
| Msa0790640 | Msa1270770 | 0.832495 | 9.152462e-56 | -8.615850e-47 |
| Msa0792880 | Msa1270770 | 0.805815 | 1.112386e-49 | -8.615850e-47 |
| Msa0801360 | Msa1270770 | 0.805677 | 1.189059e-49 | -8.615850e-47 |
| Msa0803530 | Msa1270770 | 0.815051 | 1.126996e-51 | -8.615850e-47 |
| Msa0818440 | Msa1270770 | 0.851146 | 1.073366e-60 | -8.615850e-47 |
| Msa0818550 | Msa1270770 | 0.854507 | 1.175240e-61 | -8.615850e-47 |
| Msa0820520 | Msa1270770 | 0.828204 | 1.023748e-54 | -8.615850e-47 |
| Msa0828570 | Msa1270770 | 0.813570 | 2.394371e-51 | -8.615850e-47 |
| Msa0828900 | Msa1270770 | 0.810699 | 1.012371e-50 | -8.615850e-47 |
| Msa0839830 | Msa1270770 | 0.802893 | 4.518825e-49 | -8.615850e-47 |
| Msa0129360 | Msa1270770 | 0.825969 | 3.507290e-54 | -8.615850e-47 |
| Msa0140290 | Msa1270770 | 0.819342 | 1.221501e-52 | -8.615850e-47 |
| Msa0154220 | Msa1270770 | 0.833538 | 5.035090e-56 | -8.615850e-47 |
| Msa0154240 | Msa1270770 | 0.850301 | 1.854974e-60 | -8.615850e-47 |
| Msa0154270 | Msa1270770 | 0.877676 | 5.192398e-69 | -8.615850e-47 |
| Msa0155610 | Msa1270770 | 0.820288 | 7.424665e-53 | -8.615850e-47 |
| Msa0176040 | Msa1270770 | 0.830458 | 2.904099e-55 | -8.615850e-47 |
| Msa0183560 | Msa1270770 | 0.845341 | 4.315339e-59 | -8.615850e-47 |
| Msa0197030 | Msa1270770 | 0.814320 | 1.635921e-51 | -8.615850e-47 |
| Msa0212730 | Msa1270770 | 0.833509 | 5.118381e-56 | -8.615850e-47 |
| Msa0225880 | Msa1270770 | 0.862770 | 4.003532e-64 | -8.615850e-47 |
| Msa1232270 | Msa1270770 | 0.975664 | 2.276721e-140 | -8.615850e-47 |
| Msa1252300 | Msa1270770 | 0.853003 | 3.183264e-61 | -8.615850e-47 |
| Msa1270770 | Msa1281270 | 0.806211 | 9.184808e-50 | -8.615850e-47 |
| Msa1270770 | Msa1292960 | 0.846532 | 2.047846e-59 | -8.615850e-47 |
| Msa1270770 | Msa1313050 | 0.924035 | 1.205382e-89 | -8.615850e-47 |
| Msa1270770 | Msa1320380 | 0.812765 | 3.595191e-51 | -8.615850e-47 |
| Msa1270770 | Msa1349810 | 0.828419 | 9.087798e-55 | -8.615850e-47 |
| Msa1270770 | Msa1354090 | 0.804316 | 2.290478e-49 | -8.615850e-47 |
| Msa1270770 | Msa1358340 | 0.812009 | 5.260166e-51 | -8.615850e-47 |
| Msa1270770 | Msa1359890 | 0.815854 | 7.469186e-52 | -8.615850e-47 |
| Msa1270770 | Msa1375780 | 0.800427 | 1.448435e-48 | -8.615850e-47 |
| Msa1270770 | Msa1378470 | 0.800318 | 1.524404e-48 | -8.615850e-47 |
| Msa1270770 | Msa1394900 | 0.844118 | 9.215162e-59 | -8.615850e-47 |
| Msa1270770 | Msa1421870 | 0.815048 | 1.128568e-51 | -8.615850e-47 |
| Msa1270770 | Msa1434660 | 0.813692 | 2.250644e-51 | -8.615850e-47 |
| Msa1270770 | Msa1459540 | 0.819434 | 1.163642e-52 | -8.615850e-47 |
| Msa1270770 | Msa1466350 | 0.800843 | 1.191821e-48 | -8.615850e-47 |
| Msa0364780 | Msa1270770 | 0.872087 | 4.161819e-67 | -8.615850e-47 |
| Msa0377280 | Msa1270770 | 0.825944 | 3.555948e-54 | -8.615850e-47 |
| Msa0379100 | Msa1270770 | 0.805211 | 1.489115e-49 | -8.615850e-47 |
| Msa0384530 | Msa1270770 | 0.820179 | 7.864820e-53 | -8.615850e-47 |
| Msa0392020 | Msa1270770 | 0.825673 | 4.124483e-54 | -8.615850e-47 |
| Msa0392050 | Msa1270770 | 0.849104 | 4.005129e-60 | -8.615850e-47 |
| Msa0392540 | Msa1270770 | 0.809798 | 1.583785e-50 | -8.615850e-47 |
| Msa0401340 | Msa1270770 | 0.802463 | 5.545193e-49 | -8.615850e-47 |
| Msa0404690 | Msa1270770 | 0.832830 | 7.556252e-56 | -8.615850e-47 |
| Msa0412190 | Msa1270770 | 0.861322 | 1.112915e-63 | -8.615850e-47 |
| Msa0412250 | Msa1270770 | 0.828797 | 7.363802e-55 | -8.615850e-47 |
| Msa0418430 | Msa1270770 | 0.822244 | 2.627613e-53 | -8.615850e-47 |
| Msa0428730 | Msa1270770 | 0.831334 | 1.770978e-55 | -8.615850e-47 |
| Msa0430290 | Msa1270770 | 0.801221 | 9.971888e-49 | -8.615850e-47 |
| Msa0435010 | Msa1270770 | 0.849760 | 2.629851e-60 | -8.615850e-47 |
| Msa0437550 | Msa1270770 | 0.816937 | 4.275239e-52 | -8.615850e-47 |
| Msa0440310 | Msa1270770 | 0.807652 | 4.552983e-50 | -8.615850e-47 |
| Msa0448120 | Msa1270770 | 0.802502 | 5.442803e-49 | -8.615850e-47 |
| Msa0456760 | Msa1270770 | 0.883980 | 2.833731e-71 | -8.615850e-47 |
| Msa0462590 | Msa1270770 | 0.814596 | 1.421764e-51 | -8.615850e-47 |
| Msa0465800 | Msa1270770 | 0.823494 | 1.344202e-53 | -8.615850e-47 |
| Msa0469070 | Msa1270770 | 0.803247 | 3.817969e-49 | -8.615850e-47 |
| Msa0469950 | Msa1270770 | 0.847298 | 1.263817e-59 | -8.615850e-47 |
| Msa0472740 | Msa1270770 | 0.812375 | 4.377008e-51 | -8.615850e-47 |
| Msa0479030 | Msa1270770 | 0.826792 | 2.233161e-54 | -8.615850e-47 |
| Msa0479100 | Msa1270770 | 0.832623 | 8.503192e-56 | -8.615850e-47 |
| Msa0481490 | Msa1270770 | 0.807390 | 5.173485e-50 | -8.615850e-47 |
| Msa0984000 | Msa1270770 | 0.867075 | 1.788201e-65 | -8.615850e-47 |
| Msa1031150 | Msa1270770 | 0.818199 | 2.219746e-52 | -8.615850e-47 |
| Msa1070250 | Msa1270770 | 0.803154 | 3.991891e-49 | -8.615850e-47 |
| Msa1071640 | Msa1270770 | 0.826118 | 3.233313e-54 | -8.615850e-47 |
| Msa0238860 | Msa1270770 | 0.806203 | 9.220050e-50 | -8.615850e-47 |
| Msa0253160 | Msa1270770 | 0.859005 | 5.576274e-63 | -8.615850e-47 |
| Msa0260470 | Msa1270770 | 0.854502 | 1.179403e-61 | -8.615850e-47 |
| Msa0276590 | Msa1270770 | 0.805487 | 1.303713e-49 | -8.615850e-47 |
| Msa0291940 | Msa1270770 | 0.853430 | 2.402718e-61 | -8.615850e-47 |
| Msa0303440 | Msa1270770 | 0.803459 | 3.450434e-49 | -8.615850e-47 |
| Msa0304110 | Msa1270770 | 0.863838 | 1.870504e-64 | -8.615850e-47 |
| Msa0341190 | Msa1270770 | 0.858252 | 9.357963e-63 | -8.615850e-47 |
| Msa0344680 | Msa1270770 | 0.850286 | 1.872858e-60 | -8.615850e-47 |
| Msa0344710 | Msa1270770 | 0.828361 | 9.383890e-55 | -8.615850e-47 |
| Msa0346790 | Msa1270770 | 0.801208 | 1.003490e-48 | -8.615850e-47 |
| Msa0358290 | Msa1270770 | 0.863660 | 2.124453e-64 | -8.615850e-47 |
| Msa1119570 | Msa1270770 | 0.847365 | 1.211333e-59 | -8.615850e-47 |
| Msa1137940 | Msa1270770 | 0.884770 | 1.443166e-71 | -8.615850e-47 |
| Msa1144700 | Msa1270770 | 0.837530 | 4.924084e-57 | -8.615850e-47 |
| Msa1144730 | Msa1270770 | 0.847841 | 8.957148e-60 | -8.615850e-47 |
| Msa1152290 | Msa1270770 | -0.803898 | 2.798442e-49 | -8.615850e-47 |
| Msa1158090 | Msa1270770 | 0.851553 | 8.232266e-61 | -8.615850e-47 |
| Msa1161210 | Msa1270770 | 0.805968 | 1.032973e-49 | -8.615850e-47 |
| Msa1180050 | Msa1270770 | 0.995334 | 3.061945e-215 | -8.615850e-47 |
| Msa1198720 | Msa1270770 | 0.852348 | 4.895509e-61 | -8.615850e-47 |
| Msa1212760 | Msa1270770 | 0.806752 | 7.060488e-50 | -8.615850e-47 |
| Msa0504090 | Msa1270770 | 0.871204 | 8.167341e-67 | -8.615850e-47 |
| Msa0549540 | Msa1270770 | 0.834982 | 2.186721e-56 | -8.615850e-47 |
| Msa0570680 | Msa1270770 | 0.827769 | 1.302887e-54 | -8.615850e-47 |
| Msa0583740 | Msa1270770 | 0.800824 | 1.202284e-48 | -8.615850e-47 |
| Msa0858910 | Msa1270770 | 0.808280 | 3.346847e-50 | -8.615850e-47 |
| Msa0860920 | Msa1270770 | 0.852499 | 4.435247e-61 | -8.615850e-47 |
| Msa0968780 | Msa1270770 | 0.832224 | 1.067814e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1270770 | MtrunA17_Chr8g0341471 | 95.078 | 447 | 22 | 0 | 1 | 447 | 1 | 447 | 0.0 | 861 |
| Msa1270770 | MtrunA17_Chr2g0330661 | 72.326 | 430 | 112 | 5 | 22 | 447 | 21 | 447 | 0.0 | 626 |
| Msa1270770 | MtrunA17_Chr2g0328461 | 71.981 | 414 | 113 | 3 | 34 | 447 | 41 | 451 | 0.0 | 620 |
| Msa1270770 | MtrunA17_Chr2g0330671 | 68.456 | 447 | 132 | 5 | 7 | 447 | 8 | 451 | 0.0 | 618 |
| Msa1270770 | MtrunA17_Chr2g0330721 | 71.498 | 414 | 115 | 3 | 34 | 447 | 42 | 452 | 0.0 | 615 |
| Msa1270770 | MtrunA17_Chr3g0124881 | 56.234 | 393 | 170 | 2 | 39 | 431 | 85 | 475 | 7.44e-162 | 465 |
| Msa1270770 | MtrunA17_Chr8g0364301 | 56.608 | 401 | 169 | 4 | 28 | 427 | 28 | 424 | 1.57e-155 | 447 |
| Msa1270770 | MtrunA17_Chr8g0371561 | 55.583 | 403 | 172 | 5 | 24 | 424 | 31 | 428 | 3.59e-152 | 439 |
| Msa1270770 | MtrunA17_Chr3g0128101 | 48.921 | 417 | 209 | 3 | 15 | 431 | 6 | 418 | 1.17e-143 | 417 |
| Msa1270770 | MtrunA17_Chr2g0328481 | 59.819 | 331 | 85 | 4 | 162 | 447 | 4 | 331 | 2.69e-129 | 377 |
| Msa1270770 | MtrunA17_Chr2g0328471 | 68.750 | 176 | 52 | 3 | 7 | 180 | 4 | 178 | 1.64e-80 | 247 |
| Msa1270770 | MtrunA17_Chr2g0330711 | 73.418 | 158 | 40 | 2 | 7 | 162 | 4 | 161 | 5.58e-77 | 237 |
| Msa1270770 | MtrunA17_Chr8g0364461 | 43.396 | 318 | 146 | 10 | 119 | 433 | 96 | 382 | 6.04e-71 | 230 |
| Msa1270770 | MtrunA17_Chr1g0158601 | 73.214 | 56 | 15 | 0 | 210 | 265 | 4 | 59 | 8.07e-21 | 85.9 |
| Msa1270770 | MtrunA17_Chr3g0128121 | 62.500 | 40 | 15 | 0 | 134 | 173 | 1 | 40 | 2.50e-12 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1270770 | AT1G51760.1 | 66.368 | 446 | 142 | 5 | 3 | 447 | 2 | 440 | 0.0 | 602 |
| Msa1270770 | AT1G51780.1 | 64.593 | 418 | 145 | 3 | 13 | 429 | 9 | 424 | 0.0 | 556 |
| Msa1270770 | AT5G56660.1 | 61.650 | 412 | 150 | 4 | 36 | 447 | 36 | 439 | 0.0 | 520 |
| Msa1270770 | AT5G56650.1 | 61.985 | 413 | 145 | 7 | 37 | 447 | 36 | 438 | 0.0 | 513 |
| Msa1270770 | AT5G56650.2 | 69.818 | 275 | 81 | 1 | 37 | 311 | 36 | 308 | 4.86e-141 | 406 |
| Msa1270770 | AT3G02875.1 | 50.246 | 406 | 198 | 3 | 27 | 431 | 28 | 430 | 4.76e-136 | 398 |
| Msa1270770 | AT1G44350.1 | 52.051 | 390 | 180 | 3 | 39 | 428 | 77 | 459 | 8.50e-136 | 399 |
| Msa1270770 | AT5G54140.1 | 47.826 | 391 | 201 | 3 | 49 | 438 | 39 | 427 | 6.43e-130 | 382 |
| Msa1270770 | AT3G02875.2 | 53.521 | 284 | 132 | 0 | 27 | 310 | 28 | 311 | 1.34e-105 | 317 |
| Msa1270770 | AT3G02875.3 | 53.226 | 248 | 116 | 0 | 27 | 274 | 28 | 275 | 1.44e-90 | 278 |
Find 102 sgRNAs with CRISPR-Local
Find 309 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGTGTCATGACACCATTTA+TGG | 0.164724 | 8_3:+4083869 | Msa1270770:CDS |
| CGCACCGGAAGCTGCTAATA+TGG | 0.208424 | 8_3:-4082513 | None:intergenic |
| TTTACAGTTGGAGGATAAAA+AGG | 0.228613 | 8_3:-4083780 | None:intergenic |
| GAAAATGTCACTGCTATCTT+TGG | 0.241802 | 8_3:+4082353 | Msa1270770:CDS |
| AATTCCTCATAACCCAATTC+TGG | 0.257328 | 8_3:-4079481 | None:intergenic |
| TGTTGCTTTAAGAGCTGATA+TGG | 0.312924 | 8_3:+4079615 | Msa1270770:CDS |
| AATGAAGATGGTCTCCCTTA+TGG | 0.314381 | 8_3:+4084011 | Msa1270770:CDS |
| GAAGAAGACATGGTTTGTTT+TGG | 0.321385 | 8_3:-4079286 | None:intergenic |
| ACTGGTGTCATTGGCTTCAT+TGG | 0.332227 | 8_3:+4079574 | Msa1270770:CDS |
| TGAATTGATAAGAGCAGAAT+TGG | 0.334675 | 8_3:+4079513 | Msa1270770:CDS |
| AAGCCACTTCCTGCCAATAT+TGG | 0.337443 | 8_3:-4082428 | None:intergenic |
| GATTCATGAGAATCCAGAAT+TGG | 0.342684 | 8_3:+4079468 | Msa1270770:CDS |
| GTTGCAGTCACTGGTGTCAT+TGG | 0.356001 | 8_3:+4079565 | Msa1270770:CDS |
| TCATTTATGCAGGTTATCAT+TGG | 0.356258 | 8_3:+4083702 | Msa1270770:intron |
| AAGTCTTCAGATCCCATAAA+TGG | 0.356384 | 8_3:-4083882 | None:intergenic |
| TAATGCATTCAATGTTATTC+CGG | 0.359601 | 8_3:+4083239 | Msa1270770:CDS |
| ACTGCAACTGGATGTTTATA+AGG | 0.366834 | 8_3:-4079550 | None:intergenic |
| GTCATTGGCTTCATTGGAAC+AGG | 0.368975 | 8_3:+4079580 | Msa1270770:CDS |
| ATTGGATGATCAATATTAGA+AGG | 0.380397 | 8_3:+4079443 | Msa1270770:CDS |
| CTCTAGGTCTGGTCCAATAT+TGG | 0.382393 | 8_3:+4082415 | Msa1270770:CDS |
| GCAACTGTGGACTTCCTTCA+TGG | 0.390813 | 8_3:+4083750 | Msa1270770:CDS |
| GATGACAAAATTTGTGTTGC+AGG | 0.392661 | 8_3:-4079358 | None:intergenic |
| CATTGAATGCATTACCTCCT+TGG | 0.394140 | 8_3:-4083230 | None:intergenic |
| GTTAAAGCTTTCTTTAGAAA+AGG | 0.408192 | 8_3:-4083292 | None:intergenic |
| ATGACACCAGTGACTGCAAC+TGG | 0.422420 | 8_3:-4079562 | None:intergenic |
| CCCCTCCTTCCTCTGCTGGT+TGG | 0.427309 | 8_3:-4082295 | None:intergenic |
| GGTGAAGTGGCCTCTAGGTC+TGG | 0.429572 | 8_3:+4082404 | Msa1270770:CDS |
| CCTGGATACTTCTTCATGCT+TGG | 0.432844 | 8_3:+4083927 | Msa1270770:CDS |
| GACCCCATATTAGCAGCTTC+CGG | 0.436531 | 8_3:+4082509 | Msa1270770:CDS |
| GCACCGGAAGCTGCTAATAT+GGG | 0.436843 | 8_3:-4082512 | None:intergenic |
| CTAGAGGCCACTTCACCAAT+TGG | 0.441010 | 8_3:-4082398 | None:intergenic |
| TAAGATGAAGATTAGGTGGC+TGG | 0.452500 | 8_3:-4079179 | None:intergenic |
| CCACCAATTGTGACATGATC+CGG | 0.453558 | 8_3:-4083258 | None:intergenic |
| AAATTAATGCTGATATTACT+TGG | 0.453975 | 8_3:+4084297 | Msa1270770:three_prime_UTR |
| ATTCCGGATCATGTCACAAT+TGG | 0.455454 | 8_3:+4083255 | Msa1270770:CDS |
| AGTGTCATGACACCATTTAT+GGG | 0.458073 | 8_3:+4083870 | Msa1270770:CDS |
| ATCTATGGCTAAGGCAACAT+TGG | 0.459883 | 8_3:-4084151 | None:intergenic |
| ATTGCTCCTGACTTACCAAT+TGG | 0.462008 | 8_3:+4082383 | Msa1270770:CDS |
| TATGGATGCTCTTTCTATGC+AGG | 0.463188 | 8_3:+4079633 | Msa1270770:CDS |
| GCATGAAGTGCAGCTCCATA+AGG | 0.472341 | 8_3:-4084026 | None:intergenic |
| ACTTCACCAATTGGTAAGTC+AGG | 0.474836 | 8_3:-4082389 | None:intergenic |
| TTCTATCAAGAGGTCATACC+TGG | 0.480618 | 8_3:+4083909 | Msa1270770:CDS |
| TCACCATTGTTTACAGTTGG+AGG | 0.482103 | 8_3:-4083789 | None:intergenic |
| ATGGTAACATATGAATTTGA+AGG | 0.483343 | 8_3:-4079308 | None:intergenic |
| AACTTAGGAAATGGTGGAGT+GGG | 0.484788 | 8_3:+4081063 | Msa1270770:intron |
| ATTCATGAGAATCCAGAATT+GGG | 0.487924 | 8_3:+4079469 | Msa1270770:CDS |
| TTCTTTAGAAAAGGCTCGGA+AGG | 0.489629 | 8_3:-4083283 | None:intergenic |
| TGAAGAATGCTTCACATAAA+CGG | 0.492391 | 8_3:+4083952 | Msa1270770:CDS |
| TCTTCATTGATTTCGAGATA+AGG | 0.495633 | 8_3:-4083996 | None:intergenic |
| GAATCCAGAATTGGGTTATG+AGG | 0.496062 | 8_3:+4079477 | Msa1270770:CDS |
| CCACACGCATGCATCTTTCC+AGG | 0.506178 | 8_3:-4081103 | None:intergenic |
| GGCTGATCCTTTAGACTCCC+AGG | 0.510080 | 8_3:+4082568 | Msa1270770:CDS |
| CAATTGGTGAAGTGGCCTCT+AGG | 0.510116 | 8_3:+4082399 | Msa1270770:CDS |
| TCAGCTCTTAAAGCAACAAA+AGG | 0.511836 | 8_3:-4079610 | None:intergenic |
| CCGGATCATGTCACAATTGG+TGG | 0.516445 | 8_3:+4083258 | Msa1270770:CDS |
| CTCTAGAAAATTGCTGAATG+AGG | 0.517438 | 8_3:-4079395 | None:intergenic |
| GCTCATGTTACCATGCTACT+TGG | 0.517522 | 8_3:+4081133 | Msa1270770:CDS |
| AAACATCCAGTTGCAGTCAC+TGG | 0.520491 | 8_3:+4079556 | Msa1270770:CDS |
| TTATCTTCTAAAACATCAGC+AGG | 0.527329 | 8_3:+4084064 | Msa1270770:CDS |
| CATGAAGTGCAGCTCCATAA+GGG | 0.529498 | 8_3:-4084025 | None:intergenic |
| TATCTCGAAATCAATGAAGA+TGG | 0.530795 | 8_3:+4083999 | Msa1270770:CDS |
| CCTCAATCCGCTGTCTCAGT+TGG | 0.531634 | 8_3:-4083314 | None:intergenic |
| TCCAACCAGCAGAGGAAGGA+GGG | 0.531750 | 8_3:+4082294 | Msa1270770:CDS |
| AGGTCTGGTCCAATATTGGC+AGG | 0.534596 | 8_3:+4082419 | Msa1270770:CDS |
| GGTCCAATATTGGCAGGAAG+TGG | 0.538609 | 8_3:+4082425 | Msa1270770:CDS |
| CATCAGCAGGATATTGTACC+TGG | 0.540608 | 8_3:+4084077 | Msa1270770:CDS |
| CCAAGCATGAAGAAGTATCC+AGG | 0.546741 | 8_3:-4083927 | None:intergenic |
| GTTTAAAACTTAGGAAATGG+TGG | 0.554059 | 8_3:+4081057 | Msa1270770:intron |
| AGCTTTCTTTAGAAAAGGCT+CGG | 0.555043 | 8_3:-4083287 | None:intergenic |
| TAATTTGCCTGGGAGTCTAA+AGG | 0.559413 | 8_3:-4082575 | None:intergenic |
| TGTGAAGAATTATGAGATGA+AGG | 0.560370 | 8_3:-4079256 | None:intergenic |
| CCAACTGAGACAGCGGATTG+AGG | 0.561040 | 8_3:+4083314 | Msa1270770:CDS |
| TGACTTACCAATTGGTGAAG+TGG | 0.570836 | 8_3:+4082391 | Msa1270770:CDS |
| CATTCACAAAATGTTCATGC+AGG | 0.577020 | 8_3:-4083812 | None:intergenic |
| CAACCAGCAGAGGAAGGAGG+GGG | 0.578635 | 8_3:+4082296 | Msa1270770:CDS |
| AGGTCACCATTGTTTACAGT+TGG | 0.583641 | 8_3:-4083792 | None:intergenic |
| GCTCTTAAAGCAACAAAAGG+AGG | 0.585596 | 8_3:-4079607 | None:intergenic |
| GCAACACCTTGTTTCTCGCG+AGG | 0.588370 | 8_3:+4082547 | Msa1270770:CDS |
| ATGACAAAATTTGTGTTGCA+GGG | 0.590763 | 8_3:-4079357 | None:intergenic |
| CCAACCAGCAGAGGAAGGAG+GGG | 0.591236 | 8_3:+4082295 | Msa1270770:CDS |
| TATCCTCCAACTGTAAACAA+TGG | 0.592228 | 8_3:+4083786 | Msa1270770:CDS |
| GATCAGCCTCGCGAGAAACA+AGG | 0.594248 | 8_3:-4082553 | None:intergenic |
| AGACTTCTCATTCTATCAAG+AGG | 0.600460 | 8_3:+4083899 | Msa1270770:CDS |
| TTCCAACCAGCAGAGGAAGG+AGG | 0.601581 | 8_3:+4082293 | Msa1270770:CDS |
| AATGTTGCGGTGAATATGCT+TGG | 0.603714 | 8_3:+4083831 | Msa1270770:CDS |
| GAATTTGAAGGAAGAAGACA+TGG | 0.604764 | 8_3:-4079296 | None:intergenic |
| TTGCAAGCTAATAATCGCAC+CGG | 0.606405 | 8_3:-4082528 | None:intergenic |
| CTTTGCAGCACCAAGTAGCA+TGG | 0.607237 | 8_3:-4081143 | None:intergenic |
| GTGACGATTGCAAAGATCCA+AGG | 0.614161 | 8_3:+4083213 | Msa1270770:CDS |
| GCTTTAACCAACTGAGACAG+CGG | 0.615430 | 8_3:+4083307 | Msa1270770:CDS |
| AAACTTAGGAAATGGTGGAG+TGG | 0.617389 | 8_3:+4081062 | Msa1270770:intron |
| TTGGACAAGCTGCTGTGCAT+AGG | 0.618002 | 8_3:+4083721 | Msa1270770:CDS |
| GAGCACAAGAGTAAAGTACC+TGG | 0.618593 | 8_3:+4081085 | Msa1270770:CDS |
| CACCGGAAGCTGCTAATATG+GGG | 0.622033 | 8_3:-4082511 | None:intergenic |
| ATGGGGTCTATAGATTGTTG+AGG | 0.630727 | 8_3:-4082494 | None:intergenic |
| AGAGAGTGCCAAAAGTCCAG+AGG | 0.642349 | 8_3:+4079414 | Msa1270770:CDS |
| GCATAGGTGCAATGCAACTG+TGG | 0.658051 | 8_3:+4083737 | Msa1270770:CDS |
| CAATATTGGACCAGACCTAG+AGG | 0.660996 | 8_3:-4082414 | None:intergenic |
| TGGTTGGAAAACAAGAACAA+TGG | 0.673758 | 8_3:-4082279 | None:intergenic |
| ACTGAGACAGCGGATTGAGG+AGG | 0.686390 | 8_3:+4083317 | Msa1270770:CDS |
| CCTGGAAAGATGCATGCGTG+TGG | 0.730006 | 8_3:+4081103 | Msa1270770:CDS |
| ACGATTGCAAAGATCCAAGG+AGG | 0.737015 | 8_3:+4083216 | Msa1270770:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTAATATAATGATAAAAAAA+TGG | - | chr8_3:4079330-4079349 | None:intergenic | 10.0% |
| !!! | TTTTTTTTAAGATGAAGATT+AGG | - | chr8_3:4079189-4079208 | None:intergenic | 15.0% |
| !! | TATTATGATCTATTATGATT+TGG | - | chr8_3:4079920-4079939 | None:intergenic | 15.0% |
| !!! | ACTATTATGTAAAGTATTAT+CGG | - | chr8_3:4080161-4080180 | None:intergenic | 15.0% |
| !! | TTTATTAGAAGAAAAAAATG+TGG | - | chr8_3:4080531-4080550 | None:intergenic | 15.0% |
| !! | AAAAGATCATATATACTATA+GGG | - | chr8_3:4080918-4080937 | None:intergenic | 15.0% |
| !! | TAAAAGATCATATATACTAT+AGG | - | chr8_3:4080919-4080938 | None:intergenic | 15.0% |
| !!! | TGACTTTTTATTTTGTTTTA+TGG | + | chr8_3:4080946-4080965 | Msa1270770:intron | 15.0% |
| !!! | GACTTTTTATTTTGTTTTAT+GGG | + | chr8_3:4080947-4080966 | Msa1270770:intron | 15.0% |
| !!! | TAATATCATATTTCTACAAA+GGG | + | chr8_3:4080977-4080996 | Msa1270770:intron | 15.0% |
| !!! | AAACTCTAATTTTTTATCTA+TGG | - | chr8_3:4084169-4084188 | None:intergenic | 15.0% |
| !! | AATTTCAGTTAAAAAAGTGA+TGG | - | chr8_3:4080037-4080056 | None:intergenic | 20.0% |
| !! | AAATGTTGGATATATAAAAG+AGG | - | chr8_3:4080842-4080861 | None:intergenic | 20.0% |
| !! | TTATGAATTGGTAAAAATGT+TGG | - | chr8_3:4080856-4080875 | None:intergenic | 20.0% |
| !!! | GTATATATGATCTTTTATGA+TGG | + | chr8_3:4080922-4080941 | Msa1270770:intron | 20.0% |
| !!! | CTAATATCATATTTCTACAA+AGG | + | chr8_3:4080976-4080995 | Msa1270770:intron | 20.0% |
| !! | TGATATGAATTAAAAATGTG+TGG | + | chr8_3:4081429-4081448 | Msa1270770:intron | 20.0% |
| !!! | TCTTTTAGTTAGTATCAAAA+TGG | - | chr8_3:4081947-4081966 | None:intergenic | 20.0% |
| !!! | TTTTGATACTAACTAAAAGA+AGG | + | chr8_3:4081947-4081966 | Msa1270770:intron | 20.0% |
| !! | TTTGATACTAACTAAAAGAA+GGG | + | chr8_3:4081948-4081967 | Msa1270770:intron | 20.0% |
| !!! | TTCTTTGAAGCAAAAATAAA+TGG | + | chr8_3:4082449-4082468 | Msa1270770:CDS | 20.0% |
| !! | TATGAAATAAGTGTAATAAG+TGG | - | chr8_3:4082626-4082645 | None:intergenic | 20.0% |
| !! | ATTACACTTATTTCATACTT+AGG | + | chr8_3:4082629-4082648 | Msa1270770:intron | 20.0% |
| !! | TTGTAATTAAAAGTGAAAAC+AGG | - | chr8_3:4083631-4083650 | None:intergenic | 20.0% |
| !!! | TAATTTTTTATCTATGGCTA+AGG | - | chr8_3:4084163-4084182 | None:intergenic | 20.0% |
| !! | AAATTAATGCTGATATTACT+TGG | + | chr8_3:4084297-4084316 | Msa1270770:three_prime_UTR | 20.0% |
| !!! | TTTTTAAGATGAAGATTAGG+TGG | - | chr8_3:4079186-4079205 | None:intergenic | 25.0% |
| ! | ATGGTAACATATGAATTTGA+AGG | - | chr8_3:4079311-4079330 | None:intergenic | 25.0% |
| ! | ATTGGATGATCAATATTAGA+AGG | + | chr8_3:4079443-4079462 | Msa1270770:CDS | 25.0% |
| ! | TTGAAGAGAGTAATAGTTTA+AGG | - | chr8_3:4079673-4079692 | None:intergenic | 25.0% |
| !! | TTATGTAAAGTATTATCGGA+GGG | - | chr8_3:4080157-4080176 | None:intergenic | 25.0% |
| !! | ATTATGTAAAGTATTATCGG+AGG | - | chr8_3:4080158-4080177 | None:intergenic | 25.0% |
| ! | GAAGAAAAAAATGTGGAAAA+GGG | - | chr8_3:4080524-4080543 | None:intergenic | 25.0% |
| ! | AGAAGAAAAAAATGTGGAAA+AGG | - | chr8_3:4080525-4080544 | None:intergenic | 25.0% |
| ! | TTCTACGTAATGTTAATGTT+AGG | + | chr8_3:4080592-4080611 | Msa1270770:intron | 25.0% |
| ! | TCTACGTAATGTTAATGTTA+GGG | + | chr8_3:4080593-4080612 | Msa1270770:intron | 25.0% |
| !! | TCATCTCATGTTTAAAACTT+AGG | + | chr8_3:4081048-4081067 | Msa1270770:intron | 25.0% |
| !! | CATGTTTAAAACTTAGGAAA+TGG | + | chr8_3:4081054-4081073 | Msa1270770:intron | 25.0% |
| !!! | TGTCTTAGCTTCTTATTTTT+CGG | + | chr8_3:4081211-4081230 | Msa1270770:intron | 25.0% |
| ! | TTATATTCTGCTTAAACAAG+TGG | + | chr8_3:4081258-4081277 | Msa1270770:intron | 25.0% |
| ! | TTAGTTAAAGTTGAATCGAT+CGG | + | chr8_3:4081304-4081323 | Msa1270770:intron | 25.0% |
| ! | TTAATTCATATCAGAATCTC+AGG | - | chr8_3:4081422-4081441 | None:intergenic | 25.0% |
| !! | AAAAGTATGAAATCATCACA+AGG | - | chr8_3:4081500-4081519 | None:intergenic | 25.0% |
| !! | ATGTTTCACTTTGACATTTT+TGG | - | chr8_3:4081539-4081558 | None:intergenic | 25.0% |
| ! | AAGTGAAACATATATCTCTT+TGG | + | chr8_3:4081548-4081567 | Msa1270770:intron | 25.0% |
| ! | TAATTTACAAAACTTGCATC+AGG | - | chr8_3:4081614-4081633 | None:intergenic | 25.0% |
| !!! | ATGCAAGTTTTGTAAATTAC+AGG | + | chr8_3:4081615-4081634 | Msa1270770:intron | 25.0% |
| ! | TCATCTATCATATATCTCTT+TGG | + | chr8_3:4081645-4081664 | Msa1270770:intron | 25.0% |
| ! | AGAAGTTAAGATCATCAAAA+GGG | - | chr8_3:4081795-4081814 | None:intergenic | 25.0% |
| ! | AAGAAGTTAAGATCATCAAA+AGG | - | chr8_3:4081796-4081815 | None:intergenic | 25.0% |
| ! | ATTACAATACTTCTATCATC+TGG | + | chr8_3:4081850-4081869 | Msa1270770:intron | 25.0% |
| ! | GAGAGAAAAACATTACAAAA+TGG | - | chr8_3:4081896-4081915 | None:intergenic | 25.0% |
| !!! | TCTTTATTTTGTTGTCTGAA+AGG | + | chr8_3:4082253-4082272 | Msa1270770:intron | 25.0% |
| !!! | CTTTATTTTGTTGTCTGAAA+GGG | + | chr8_3:4082254-4082273 | Msa1270770:intron | 25.0% |
| !! | CTAAGAAAATTTTAGATGCT+GGG | + | chr8_3:4082324-4082343 | Msa1270770:CDS | 25.0% |
| !! | TAAGAAAATTTTAGATGCTG+GGG | + | chr8_3:4082325-4082344 | Msa1270770:CDS | 25.0% |
| ! | TGAAGCAAAAATAAATGGAA+AGG | + | chr8_3:4082454-4082473 | Msa1270770:CDS | 25.0% |
| ! | GAAGCAAAAATAAATGGAAA+GGG | + | chr8_3:4082455-4082474 | Msa1270770:CDS | 25.0% |
| !! | AATGTAAGAATAATTTGCCT+GGG | - | chr8_3:4082588-4082607 | None:intergenic | 25.0% |
| !! | AAATGTAAGAATAATTTGCC+TGG | - | chr8_3:4082589-4082608 | None:intergenic | 25.0% |
| ! | TAATAAGTGGATAATAGGAA+GGG | - | chr8_3:4082613-4082632 | None:intergenic | 25.0% |
| ! | AAGTGTAATAAGTGGATAAT+AGG | - | chr8_3:4082618-4082637 | None:intergenic | 25.0% |
| ! | CAAGTAAATAAGATACTGTT+TGG | - | chr8_3:4082860-4082879 | None:intergenic | 25.0% |
| ! | TTTCAAACAATGATGATTCT+TGG | - | chr8_3:4083113-4083132 | None:intergenic | 25.0% |
| ! | TAATGCATTCAATGTTATTC+CGG | + | chr8_3:4083239-4083258 | Msa1270770:CDS | 25.0% |
| !! | GTTAAAGCTTTCTTTAGAAA+AGG | - | chr8_3:4083295-4083314 | None:intergenic | 25.0% |
| ! | AAAAACAATAGAGAAATGTG+TGG | - | chr8_3:4084228-4084247 | None:intergenic | 25.0% |
| TGTGAAGAATTATGAGATGA+AGG | - | chr8_3:4079259-4079278 | None:intergenic | 30.0% | |
| ATGACAAAATTTGTGTTGCA+GGG | - | chr8_3:4079360-4079379 | None:intergenic | 30.0% | |
| ATTCATGAGAATCCAGAATT+GGG | + | chr8_3:4079469-4079488 | Msa1270770:CDS | 30.0% | |
| TGAATTGATAAGAGCAGAAT+TGG | + | chr8_3:4079513-4079532 | Msa1270770:CDS | 30.0% | |
| ! | TGAAAATCCGTCAATTTTGT+CGG | + | chr8_3:4079741-4079760 | Msa1270770:intron | 30.0% |
| CTTGAGAAGAGATTATAAAG+AGG | + | chr8_3:4079816-4079835 | Msa1270770:intron | 30.0% | |
| AAAAATGTGGAAAAGGGATA+AGG | - | chr8_3:4080518-4080537 | None:intergenic | 30.0% | |
| CTACGTAATGTTAATGTTAG+GGG | + | chr8_3:4080594-4080613 | Msa1270770:intron | 30.0% | |
| !!! | AGATGTTTTGGTGATTTGTA+TGG | - | chr8_3:4080652-4080671 | None:intergenic | 30.0% |
| ! | ATCAGAGTGATAAGATGTTT+TGG | - | chr8_3:4080664-4080683 | None:intergenic | 30.0% |
| TCATATATACTATAGGGTGT+TGG | - | chr8_3:4080912-4080931 | None:intergenic | 30.0% | |
| ! | GTTTAAAACTTAGGAAATGG+TGG | + | chr8_3:4081057-4081076 | Msa1270770:intron | 30.0% |
| TAGTTAAAGTTGAATCGATC+GGG | + | chr8_3:4081305-4081324 | Msa1270770:intron | 30.0% | |
| TTGTAGAGTTAATGACACTT+TGG | - | chr8_3:4081470-4081489 | None:intergenic | 30.0% | |
| TGTAGCATATTACCAAATTG+TGG | + | chr8_3:4081573-4081592 | Msa1270770:intron | 30.0% | |
| GTAGCATATTACCAAATTGT+GGG | + | chr8_3:4081574-4081593 | Msa1270770:intron | 30.0% | |
| TAGCATATTACCAAATTGTG+GGG | + | chr8_3:4081575-4081594 | Msa1270770:intron | 30.0% | |
| GATATAATTTCCCCACAATT+TGG | - | chr8_3:4081588-4081607 | None:intergenic | 30.0% | |
| !! | CATTGGAAAAGAAGTATCTA+AGG | - | chr8_3:4081715-4081734 | None:intergenic | 30.0% |
| ! | CTTTGATTCAAGTTTGACAT+TGG | - | chr8_3:4081732-4081751 | None:intergenic | 30.0% |
| ! | TCAAAATCTTGCTTAGTTCT+TGG | + | chr8_3:4081914-4081933 | Msa1270770:intron | 30.0% |
| ACATGTCAGTATTAATATCG+TGG | + | chr8_3:4082149-4082168 | Msa1270770:intron | 30.0% | |
| ! | TACTTTTCTCAGTATTGTCT+TGG | + | chr8_3:4082200-4082219 | Msa1270770:intron | 30.0% |
| ! | GCTAAGAAAATTTTAGATGC+TGG | + | chr8_3:4082323-4082342 | Msa1270770:CDS | 30.0% |
| GTAATAAGTGGATAATAGGA+AGG | - | chr8_3:4082614-4082633 | None:intergenic | 30.0% | |
| ! | TTTCATACTTAGGCTCTTTT+TGG | + | chr8_3:4082639-4082658 | Msa1270770:intron | 30.0% |
| AAGATCTCTTGTAAAGCTTT+CGG | + | chr8_3:4082780-4082799 | Msa1270770:intron | 30.0% | |
| GTAAATAAGATACTGTTTGG+AGG | - | chr8_3:4082857-4082876 | None:intergenic | 30.0% | |
| ATTATGTAAGCAAGACAAGA+GGG | - | chr8_3:4083176-4083195 | None:intergenic | 30.0% | |
| AATTATGTAAGCAAGACAAG+AGG | - | chr8_3:4083177-4083196 | None:intergenic | 30.0% | |
| CAGGTTTAACAATCAAAGTA+AGG | - | chr8_3:4083453-4083472 | None:intergenic | 30.0% | |
| TCATTTATGCAGGTTATCAT+TGG | + | chr8_3:4083702-4083721 | Msa1270770:intron | 30.0% | |
| TTTACAGTTGGAGGATAAAA+AGG | - | chr8_3:4083783-4083802 | None:intergenic | 30.0% | |
| ! | TGAACATTTTGTGAATGTTG+CGG | + | chr8_3:4083818-4083837 | Msa1270770:CDS | 30.0% |
| TGAAGAATGCTTCACATAAA+CGG | + | chr8_3:4083952-4083971 | Msa1270770:CDS | 30.0% | |
| !! | TCTTCATTGATTTCGAGATA+AGG | - | chr8_3:4083999-4084018 | None:intergenic | 30.0% |
| TATCTCGAAATCAATGAAGA+TGG | + | chr8_3:4083999-4084018 | Msa1270770:CDS | 30.0% | |
| !! | TTATCTTCTAAAACATCAGC+AGG | + | chr8_3:4084064-4084083 | Msa1270770:CDS | 30.0% |
| !!! | GAAGAAGACATGGTTTGTTT+TGG | - | chr8_3:4079289-4079308 | None:intergenic | 35.0% |
| GAATTTGAAGGAAGAAGACA+TGG | - | chr8_3:4079299-4079318 | None:intergenic | 35.0% | |
| GATGACAAAATTTGTGTTGC+AGG | - | chr8_3:4079361-4079380 | None:intergenic | 35.0% | |
| ! | CTCTAGAAAATTGCTGAATG+AGG | - | chr8_3:4079398-4079417 | None:intergenic | 35.0% |
| ! | ATCAAAAACCTCTGGACTTT+TGG | - | chr8_3:4079425-4079444 | None:intergenic | 35.0% |
| ! | AAAGTCCAGAGGTTTTTGAT+TGG | + | chr8_3:4079425-4079444 | Msa1270770:CDS | 35.0% |
| ATCATCCAATCAAAAACCTC+TGG | - | chr8_3:4079433-4079452 | None:intergenic | 35.0% | |
| GATTCATGAGAATCCAGAAT+TGG | + | chr8_3:4079468-4079487 | Msa1270770:CDS | 35.0% | |
| AATTCCTCATAACCCAATTC+TGG | - | chr8_3:4079484-4079503 | None:intergenic | 35.0% | |
| ACTGCAACTGGATGTTTATA+AGG | - | chr8_3:4079553-4079572 | None:intergenic | 35.0% | |
| TCAGCTCTTAAAGCAACAAA+AGG | - | chr8_3:4079613-4079632 | None:intergenic | 35.0% | |
| !! | TGTTGCTTTAAGAGCTGATA+TGG | + | chr8_3:4079615-4079634 | Msa1270770:CDS | 35.0% |
| GAATCCTATCTATCCAATGT+GGG | - | chr8_3:4079797-4079816 | None:intergenic | 35.0% | |
| AGAATCCTATCTATCCAATG+TGG | - | chr8_3:4079798-4079817 | None:intergenic | 35.0% | |
| GAGAAGAGATTATAAAGAGG+AGG | + | chr8_3:4079819-4079838 | Msa1270770:intron | 35.0% | |
| CTAACTCATCCATACAAAAC+CGG | - | chr8_3:4079863-4079882 | None:intergenic | 35.0% | |
| ! | TTCCAGCTTCACATTTTTCA+CGG | - | chr8_3:4080081-4080100 | None:intergenic | 35.0% |
| AAGCTGGAAATTGTAGAGTT+TGG | + | chr8_3:4080092-4080111 | Msa1270770:intron | 35.0% | |
| ATTTGTATGGAGCAACATAG+AGG | - | chr8_3:4080639-4080658 | None:intergenic | 35.0% | |
| !! | TCTTGTGGTTCTAAAGCATT+TGG | - | chr8_3:4080765-4080784 | None:intergenic | 35.0% |
| ! | ACGTAATGCCTTAAGGTTTT+GGG | - | chr8_3:4080809-4080828 | None:intergenic | 35.0% |
| ! | TACGTAATGCCTTAAGGTTT+TGG | - | chr8_3:4080810-4080829 | None:intergenic | 35.0% |
| CTCATATACGTAATGCCTTA+AGG | - | chr8_3:4080816-4080835 | None:intergenic | 35.0% | |
| ATCTCACATCGCTTATGAAT+TGG | - | chr8_3:4080868-4080887 | None:intergenic | 35.0% | |
| ACAGCATGAAAAAGAGATAC+AGG | + | chr8_3:4081174-4081193 | Msa1270770:CDS | 35.0% | |
| TGTCAGTATTAATATCGTGG+CGG | + | chr8_3:4082152-4082171 | Msa1270770:intron | 35.0% | |
| ACTGACATGTTAAACAGACA+TGG | - | chr8_3:4082181-4082200 | None:intergenic | 35.0% | |
| GAATTTATCAGTAATCCACG+AGG | - | chr8_3:4082235-4082254 | None:intergenic | 35.0% | |
| TGGTTGGAAAACAAGAACAA+TGG | - | chr8_3:4082282-4082301 | None:intergenic | 35.0% | |
| GAAAATGTCACTGCTATCTT+TGG | + | chr8_3:4082353-4082372 | Msa1270770:CDS | 35.0% | |
| GCAAAAATAAATGGAAAGGG+AGG | + | chr8_3:4082458-4082477 | Msa1270770:CDS | 35.0% | |
| CTGATTGCTTAGCATAGTTA+TGG | - | chr8_3:4082917-4082936 | None:intergenic | 35.0% | |
| AGACTATTAAGAGCCTAAGT+AGG | + | chr8_3:4082996-4083015 | Msa1270770:intron | 35.0% | |
| TTATGTAAGCAAGACAAGAG+GGG | - | chr8_3:4083175-4083194 | None:intergenic | 35.0% | |
| ! | AGCTTTCTTTAGAAAAGGCT+CGG | - | chr8_3:4083290-4083309 | None:intergenic | 35.0% |
| ! | AAGCTGATGATGCATACTAT+AGG | - | chr8_3:4083408-4083427 | None:intergenic | 35.0% |
| TACGTACAATCAAGCTAATC+AGG | - | chr8_3:4083472-4083491 | None:intergenic | 35.0% | |
| CGTAAAGTTAACTCAGAAAC+AGG | + | chr8_3:4083488-4083507 | Msa1270770:intron | 35.0% | |
| TCAAGTCGTTTATCCAAACA+AGG | + | chr8_3:4083667-4083686 | Msa1270770:intron | 35.0% | |
| TGCATAAATGAATCAGTCCT+AGG | - | chr8_3:4083693-4083712 | None:intergenic | 35.0% | |
| ! | TAGGACTGATTCATTTATGC+AGG | + | chr8_3:4083692-4083711 | Msa1270770:intron | 35.0% |
| AAAAAGGTTTCACTCCATGA+AGG | - | chr8_3:4083767-4083786 | None:intergenic | 35.0% | |
| TATCCTCCAACTGTAAACAA+TGG | + | chr8_3:4083786-4083805 | Msa1270770:CDS | 35.0% | |
| CATTCACAAAATGTTCATGC+AGG | - | chr8_3:4083815-4083834 | None:intergenic | 35.0% | |
| TAGTGTCATGACACCATTTA+TGG | + | chr8_3:4083869-4083888 | Msa1270770:CDS | 35.0% | |
| AGTGTCATGACACCATTTAT+GGG | + | chr8_3:4083870-4083889 | Msa1270770:CDS | 35.0% | |
| AAGTCTTCAGATCCCATAAA+TGG | - | chr8_3:4083885-4083904 | None:intergenic | 35.0% | |
| AGACTTCTCATTCTATCAAG+AGG | + | chr8_3:4083899-4083918 | Msa1270770:CDS | 35.0% | |
| ! | TGATATTTTCTCTCAACACC+AGG | - | chr8_3:4084098-4084117 | None:intergenic | 35.0% |
| ! | AGTTTTCACTACATACTCTG+TGG | + | chr8_3:4084184-4084203 | Msa1270770:three_prime_UTR | 35.0% |
| TAAGATGAAGATTAGGTGGC+TGG | - | chr8_3:4079182-4079201 | None:intergenic | 40.0% | |
| !!! | GAAGACATGGTTTGTTTTGG+TGG | - | chr8_3:4079286-4079305 | None:intergenic | 40.0% |
| GAATCCAGAATTGGGTTATG+AGG | + | chr8_3:4079477-4079496 | Msa1270770:CDS | 40.0% | |
| GCTCTTAAAGCAACAAAAGG+AGG | - | chr8_3:4079610-4079629 | None:intergenic | 40.0% | |
| TATGGATGCTCTTTCTATGC+AGG | + | chr8_3:4079633-4079652 | Msa1270770:CDS | 40.0% | |
| GCTAACACCGACAAAATTGA+CGG | - | chr8_3:4079751-4079770 | None:intergenic | 40.0% | |
| !!! | GTCAATTTTGTCGGTGTTAG+CGG | + | chr8_3:4079750-4079769 | Msa1270770:intron | 40.0% |
| TAGTCCCACATTGGATAGAT+AGG | + | chr8_3:4079790-4079809 | Msa1270770:intron | 40.0% | |
| !! | CGGTTTTGTATGGATGAGTT+AGG | + | chr8_3:4079861-4079880 | Msa1270770:intron | 40.0% |
| ! | TTTTCACGGTGGAAATGCAT+TGG | - | chr8_3:4080067-4080086 | None:intergenic | 40.0% |
| TTGTAGAGTTTGGCAAAACG+TGG | + | chr8_3:4080102-4080121 | Msa1270770:intron | 40.0% | |
| ! | AGTTTGGCAAAACGTGGTTT+TGG | + | chr8_3:4080108-4080127 | Msa1270770:intron | 40.0% |
| TTGCCTTCCCCTATGTATAT+TGG | + | chr8_3:4080706-4080725 | Msa1270770:intron | 40.0% | |
| TGCCTTCCCCTATGTATATT+GGG | + | chr8_3:4080707-4080726 | Msa1270770:intron | 40.0% | |
| TGACTCCCCAATATACATAG+GGG | - | chr8_3:4080716-4080735 | None:intergenic | 40.0% | |
| CTGACTCCCCAATATACATA+GGG | - | chr8_3:4080717-4080736 | None:intergenic | 40.0% | |
| !! | ATGCTTTAGAACCACAAGAG+AGG | + | chr8_3:4080766-4080785 | Msa1270770:intron | 40.0% |
| !! | TGCTTTAGAACCACAAGAGA+GGG | + | chr8_3:4080767-4080786 | Msa1270770:intron | 40.0% |
| !!! | TAATGCCTTAAGGTTTTGGG+TGG | - | chr8_3:4080806-4080825 | None:intergenic | 40.0% |
| ! | AAACTTAGGAAATGGTGGAG+TGG | + | chr8_3:4081062-4081081 | Msa1270770:intron | 40.0% |
| ! | AACTTAGGAAATGGTGGAGT+GGG | + | chr8_3:4081063-4081082 | Msa1270770:intron | 40.0% |
| TCCATGGCTGGAATAATTCA+TGG | + | chr8_3:4081343-4081362 | Msa1270770:intron | 40.0% | |
| TAAACCCTCCCAGTTTCTAT+GGG | - | chr8_3:4081372-4081391 | None:intergenic | 40.0% | |
| CACTTTGGACAATAGAGAAG+TGG | - | chr8_3:4081455-4081474 | None:intergenic | 40.0% | |
| ! | GCACTGACACTTCAGATTAA+AGG | + | chr8_3:4082052-4082071 | Msa1270770:intron | 40.0% |
| TTTATCAGTAATCCACGAGG+AGG | - | chr8_3:4082232-4082251 | None:intergenic | 40.0% | |
| ATTGCTCCTGACTTACCAAT+TGG | + | chr8_3:4082383-4082402 | Msa1270770:CDS | 40.0% | |
| ACTTCACCAATTGGTAAGTC+AGG | - | chr8_3:4082392-4082411 | None:intergenic | 40.0% | |
| TGACTTACCAATTGGTGAAG+TGG | + | chr8_3:4082391-4082410 | Msa1270770:CDS | 40.0% | |
| ATGGGGTCTATAGATTGTTG+AGG | - | chr8_3:4082497-4082516 | None:intergenic | 40.0% | |
| TTGCAAGCTAATAATCGCAC+CGG | - | chr8_3:4082531-4082550 | None:intergenic | 40.0% | |
| ! | TAATTTGCCTGGGAGTCTAA+AGG | - | chr8_3:4082578-4082597 | None:intergenic | 40.0% |
| GAGCTAATGTAAACAGCTCA+TGG | - | chr8_3:4082835-4082854 | None:intergenic | 40.0% | |
| CCACAAATAGGTTCCTACTT+AGG | - | chr8_3:4083012-4083031 | None:intergenic | 40.0% | |
| CCTAAGTAGGAACCTATTTG+TGG | + | chr8_3:4083009-4083028 | Msa1270770:intron | 40.0% | |
| ! | GGTGGAAGTTTTCCACAAAT+AGG | - | chr8_3:4083024-4083043 | None:intergenic | 40.0% |
| ! | TTTTATGCAGAAGAAGCAGG+TGG | - | chr8_3:4083042-4083061 | None:intergenic | 40.0% |
| ! | CCATTTTATGCAGAAGAAGC+AGG | - | chr8_3:4083045-4083064 | None:intergenic | 40.0% |
| CCTGCTTCTTCTGCATAAAA+TGG | + | chr8_3:4083042-4083061 | Msa1270770:intron | 40.0% | |
| ! | ATGAAAGACGTGCTTGTTGA+AGG | + | chr8_3:4083141-4083160 | Msa1270770:intron | 40.0% |
| CATTGAATGCATTACCTCCT+TGG | - | chr8_3:4083233-4083252 | None:intergenic | 40.0% | |
| ATTCCGGATCATGTCACAAT+TGG | + | chr8_3:4083255-4083274 | Msa1270770:CDS | 40.0% | |
| ! | TTCTTTAGAAAAGGCTCGGA+AGG | - | chr8_3:4083286-4083305 | None:intergenic | 40.0% |
| GATGATGCATACTATAGGAG+AGG | - | chr8_3:4083403-4083422 | None:intergenic | 40.0% | |
| CATAACTGAGAGTCATGCAT+TGG | + | chr8_3:4083574-4083593 | Msa1270770:intron | 40.0% | |
| TCACCATTGTTTACAGTTGG+AGG | - | chr8_3:4083792-4083811 | None:intergenic | 40.0% | |
| AGGTCACCATTGTTTACAGT+TGG | - | chr8_3:4083795-4083814 | None:intergenic | 40.0% | |
| AATGTTGCGGTGAATATGCT+TGG | + | chr8_3:4083831-4083850 | Msa1270770:CDS | 40.0% | |
| TTCTATCAAGAGGTCATACC+TGG | + | chr8_3:4083909-4083928 | Msa1270770:CDS | 40.0% | |
| AATGAAGATGGTCTCCCTTA+TGG | + | chr8_3:4084011-4084030 | Msa1270770:CDS | 40.0% | |
| ATCTATGGCTAAGGCAACAT+TGG | - | chr8_3:4084154-4084173 | None:intergenic | 40.0% | |
| AAACATCCAGTTGCAGTCAC+TGG | + | chr8_3:4079556-4079575 | Msa1270770:CDS | 45.0% | |
| !! | ACTGGTGTCATTGGCTTCAT+TGG | + | chr8_3:4079574-4079593 | Msa1270770:CDS | 45.0% |
| !! | GTCATTGGCTTCATTGGAAC+AGG | + | chr8_3:4079580-4079599 | Msa1270770:CDS | 45.0% |
| AATGTGGGACTAAATCCCCT+CGG | - | chr8_3:4079782-4079801 | None:intergenic | 45.0% | |
| !! | CCATACAAAACCGGCTTGTA+TGG | - | chr8_3:4079854-4079873 | None:intergenic | 45.0% |
| !! | CCATACAAGCCGGTTTTGTA+TGG | + | chr8_3:4079851-4079870 | Msa1270770:intron | 45.0% |
| ! | CAGCTTCACATTTTTCACGG+TGG | - | chr8_3:4080078-4080097 | None:intergenic | 45.0% |
| CACCGTGAAAAATGTGAAGC+TGG | + | chr8_3:4080076-4080095 | Msa1270770:intron | 45.0% | |
| !!! | TTGGCAAAACGTGGTTTTGG+TGG | + | chr8_3:4080111-4080130 | Msa1270770:intron | 45.0% |
| !!! | TGGCAAAACGTGGTTTTGGT+GGG | + | chr8_3:4080112-4080131 | Msa1270770:intron | 45.0% |
| GCCTTCCCCTATGTATATTG+GGG | + | chr8_3:4080708-4080727 | Msa1270770:intron | 45.0% | |
| TCCCCAATATACATAGGGGA+AGG | - | chr8_3:4080712-4080731 | None:intergenic | 45.0% | |
| CCTGACTCCCCAATATACAT+AGG | - | chr8_3:4080718-4080737 | None:intergenic | 45.0% | |
| CCTATGTATATTGGGGAGTC+AGG | + | chr8_3:4080715-4080734 | Msa1270770:intron | 45.0% | |
| ATGTATATTGGGGAGTCAGG+AGG | + | chr8_3:4080718-4080737 | Msa1270770:intron | 45.0% | |
| CATCTCCACCCAAAACCTTA+AGG | + | chr8_3:4080798-4080817 | Msa1270770:intron | 45.0% | |
| ! | GAGCACAAGAGTAAAGTACC+TGG | + | chr8_3:4081085-4081104 | Msa1270770:CDS | 45.0% |
| GCTCATGTTACCATGCTACT+TGG | + | chr8_3:4081133-4081152 | Msa1270770:CDS | 45.0% | |
| AACAAGTGGCTTGACTCAGT+TGG | + | chr8_3:4081272-4081291 | Msa1270770:intron | 45.0% | |
| !! | GAGCACTCGAGTTTTATCCA+TGG | + | chr8_3:4081327-4081346 | Msa1270770:intron | 45.0% |
| !! | ACTCGAGTTTTATCCATGGC+TGG | + | chr8_3:4081331-4081350 | Msa1270770:intron | 45.0% |
| GCCATGAATTATTCCAGCCA+TGG | - | chr8_3:4081347-4081366 | None:intergenic | 45.0% | |
| CTAAACCCTCCCAGTTTCTA+TGG | - | chr8_3:4081373-4081392 | None:intergenic | 45.0% | |
| ! | CTGAAGTGTCAGTGCTACAT+AGG | - | chr8_3:4082047-4082066 | None:intergenic | 45.0% |
| !!! | TCTTGTTTTCCAACCAGCAG+AGG | + | chr8_3:4082286-4082305 | Msa1270770:CDS | 45.0% |
| CAATATTGGACCAGACCTAG+AGG | - | chr8_3:4082417-4082436 | None:intergenic | 45.0% | |
| CTCTAGGTCTGGTCCAATAT+TGG | + | chr8_3:4082415-4082434 | Msa1270770:CDS | 45.0% | |
| AAGCCACTTCCTGCCAATAT+TGG | - | chr8_3:4082431-4082450 | None:intergenic | 45.0% | |
| TACATAATTCATGCTCCCGC+AGG | + | chr8_3:4083188-4083207 | Msa1270770:intron | 45.0% | |
| TTTGCAATCGTCACAACCTG+CGG | - | chr8_3:4083207-4083226 | None:intergenic | 45.0% | |
| GTGACGATTGCAAAGATCCA+AGG | + | chr8_3:4083213-4083232 | Msa1270770:CDS | 45.0% | |
| ACGATTGCAAAGATCCAAGG+AGG | + | chr8_3:4083216-4083235 | Msa1270770:CDS | 45.0% | |
| CCACCAATTGTGACATGATC+CGG | - | chr8_3:4083261-4083280 | None:intergenic | 45.0% | |
| GCTTTAACCAACTGAGACAG+CGG | + | chr8_3:4083307-4083326 | Msa1270770:CDS | 45.0% | |
| ! | CGGATTGAGGAGGTATGTAT+TGG | + | chr8_3:4083327-4083346 | Msa1270770:intron | 45.0% |
| ! | ACTGAGAGTCATGCATTGGT+TGG | + | chr8_3:4083578-4083597 | Msa1270770:intron | 45.0% |
| CGTTTATCCAAACAAGGCCT+AGG | + | chr8_3:4083673-4083692 | Msa1270770:intron | 45.0% | |
| !! | AATCAGTCCTAGGCCTTGTT+TGG | - | chr8_3:4083683-4083702 | None:intergenic | 45.0% |
| !! | CCAAGCATGAAGAAGTATCC+AGG | - | chr8_3:4083930-4083949 | None:intergenic | 45.0% |
| CCTGGATACTTCTTCATGCT+TGG | + | chr8_3:4083927-4083946 | Msa1270770:CDS | 45.0% | |
| CATGAAGTGCAGCTCCATAA+GGG | - | chr8_3:4084028-4084047 | None:intergenic | 45.0% | |
| CATCAGCAGGATATTGTACC+TGG | + | chr8_3:4084077-4084096 | Msa1270770:CDS | 45.0% | |
| !! | GAATAATAATAATATAATAA+CGG | - | chr8_3:4082007-4082026 | None:intergenic | 5.0% |
| !! | AGAGAGTGCCAAAAGTCCAG+AGG | + | chr8_3:4079414-4079433 | Msa1270770:CDS | 50.0% |
| ATGACACCAGTGACTGCAAC+TGG | - | chr8_3:4079565-4079584 | None:intergenic | 50.0% | |
| !! | GTTGCAGTCACTGGTGTCAT+TGG | + | chr8_3:4079565-4079584 | Msa1270770:CDS | 50.0% |
| GAGGGGATTTAGTCCCACAT+TGG | + | chr8_3:4079781-4079800 | Msa1270770:intron | 50.0% | |
| !! | CAAAACCGGCTTGTATGGTG+AGG | - | chr8_3:4079849-4079868 | None:intergenic | 50.0% |
| CGCAGCTGTAACGAATATCG+AGG | - | chr8_3:4079887-4079906 | None:intergenic | 50.0% | |
| TATCGGAGGGTTTGCCATCA+CGG | - | chr8_3:4080144-4080163 | None:intergenic | 50.0% | |
| CTTTGCAGCACCAAGTAGCA+TGG | - | chr8_3:4081146-4081165 | None:intergenic | 50.0% | |
| TCATGGCCACCCATAGAAAC+TGG | + | chr8_3:4081360-4081379 | Msa1270770:intron | 50.0% | |
| CATGGCCACCCATAGAAACT+GGG | + | chr8_3:4081361-4081380 | Msa1270770:intron | 50.0% | |
| ! | GTTTTCCAACCAGCAGAGGA+AGG | + | chr8_3:4082290-4082309 | Msa1270770:CDS | 50.0% |
| CTAGAGGCCACTTCACCAAT+TGG | - | chr8_3:4082401-4082420 | None:intergenic | 50.0% | |
| CAATTGGTGAAGTGGCCTCT+AGG | + | chr8_3:4082399-4082418 | Msa1270770:CDS | 50.0% | |
| AGGTCTGGTCCAATATTGGC+AGG | + | chr8_3:4082419-4082438 | Msa1270770:CDS | 50.0% | |
| GGTCCAATATTGGCAGGAAG+TGG | + | chr8_3:4082425-4082444 | Msa1270770:CDS | 50.0% | |
| GACCCCATATTAGCAGCTTC+CGG | + | chr8_3:4082509-4082528 | Msa1270770:CDS | 50.0% | |
| CACCGGAAGCTGCTAATATG+GGG | - | chr8_3:4082514-4082533 | None:intergenic | 50.0% | |
| GCACCGGAAGCTGCTAATAT+GGG | - | chr8_3:4082515-4082534 | None:intergenic | 50.0% | |
| TTGCAATCGTCACAACCTGC+GGG | - | chr8_3:4083206-4083225 | None:intergenic | 50.0% | |
| CCGGATCATGTCACAATTGG+TGG | + | chr8_3:4083258-4083277 | Msa1270770:CDS | 50.0% | |
| TTGGACAAGCTGCTGTGCAT+AGG | + | chr8_3:4083721-4083740 | Msa1270770:CDS | 50.0% | |
| GCATAGGTGCAATGCAACTG+TGG | + | chr8_3:4083737-4083756 | Msa1270770:CDS | 50.0% | |
| GCAACTGTGGACTTCCTTCA+TGG | + | chr8_3:4083750-4083769 | Msa1270770:CDS | 50.0% | |
| GCATGAAGTGCAGCTCCATA+AGG | - | chr8_3:4084029-4084048 | None:intergenic | 50.0% | |
| ! | GGACTAAATCCCCTCGGTGT+TGG | - | chr8_3:4079776-4079795 | None:intergenic | 55.0% |
| GCACTCCTCACCATACAAGC+CGG | + | chr8_3:4079841-4079860 | Msa1270770:intron | 55.0% | |
| ! | TTGGTGGGTATCCACCGTGA+TGG | + | chr8_3:4080127-4080146 | Msa1270770:intron | 55.0% |
| GGAGCAACATAGAGGCGACA+CGG | - | chr8_3:4080631-4080650 | None:intergenic | 55.0% | |
| !! | AGGAGCGTCGGGAGAAACAA+CGG | + | chr8_3:4080738-4080757 | Msa1270770:intron | 55.0% |
| TGTGTCGTCTCCCTCTCTTG+TGG | - | chr8_3:4080780-4080799 | None:intergenic | 55.0% | |
| CCACACGCATGCATCTTTCC+AGG | - | chr8_3:4081106-4081125 | None:intergenic | 55.0% | |
| CCTGGAAAGATGCATGCGTG+TGG | + | chr8_3:4081103-4081122 | Msa1270770:CDS | 55.0% | |
| GCCACCCATAGAAACTGGGA+GGG | + | chr8_3:4081365-4081384 | Msa1270770:intron | 55.0% | |
| ACCCTCCCAGTTTCTATGGG+TGG | - | chr8_3:4081369-4081388 | None:intergenic | 55.0% | |
| ! | TCTTGGTCTTCACCTCCTCG+TGG | + | chr8_3:4082217-4082236 | Msa1270770:intron | 55.0% |
| TTCCAACCAGCAGAGGAAGG+AGG | + | chr8_3:4082293-4082312 | Msa1270770:CDS | 55.0% | |
| TCCAACCAGCAGAGGAAGGA+GGG | + | chr8_3:4082294-4082313 | Msa1270770:CDS | 55.0% | |
| CGCACCGGAAGCTGCTAATA+TGG | - | chr8_3:4082516-4082535 | None:intergenic | 55.0% | |
| ! | GCAACACCTTGTTTCTCGCG+AGG | + | chr8_3:4082547-4082566 | Msa1270770:CDS | 55.0% |
| GATCAGCCTCGCGAGAAACA+AGG | - | chr8_3:4082556-4082575 | None:intergenic | 55.0% | |
| GGCTGATCCTTTAGACTCCC+AGG | + | chr8_3:4082568-4082587 | Msa1270770:CDS | 55.0% | |
| CCTCAATCCGCTGTCTCAGT+TGG | - | chr8_3:4083317-4083336 | None:intergenic | 55.0% | |
| !! | CCAACTGAGACAGCGGATTG+AGG | + | chr8_3:4083314-4083333 | Msa1270770:CDS | 55.0% |
| !! | ACTGAGACAGCGGATTGAGG+AGG | + | chr8_3:4083317-4083336 | Msa1270770:CDS | 55.0% |
| GTGTTAGCGGCCAACACCGA+GGG | + | chr8_3:4079763-4079782 | Msa1270770:intron | 60.0% | |
| TGTTAGCGGCCAACACCGAG+GGG | + | chr8_3:4079764-4079783 | Msa1270770:intron | 60.0% | |
| !! | GGAGCGTCGGGAGAAACAAC+GGG | + | chr8_3:4080739-4080758 | Msa1270770:intron | 60.0% |
| GGCCACCCATAGAAACTGGG+AGG | + | chr8_3:4081364-4081383 | Msa1270770:intron | 60.0% | |
| CCAACCAGCAGAGGAAGGAG+GGG | + | chr8_3:4082295-4082314 | Msa1270770:CDS | 60.0% | |
| CAACCAGCAGAGGAAGGAGG+GGG | + | chr8_3:4082296-4082315 | Msa1270770:CDS | 60.0% | |
| GGTGAAGTGGCCTCTAGGTC+TGG | + | chr8_3:4082404-4082423 | Msa1270770:CDS | 60.0% | |
| GGTGTTAGCGGCCAACACCG+AGG | + | chr8_3:4079762-4079781 | Msa1270770:intron | 65.0% | |
| CGGAGGGTTTGCCATCACGG+TGG | - | chr8_3:4080141-4080160 | None:intergenic | 65.0% | |
| ! | TGGGGAGTCAGGAGGAGCGT+CGG | + | chr8_3:4080726-4080745 | Msa1270770:intron | 65.0% |
| CCCCTCCTTCCTCTGCTGGT+TGG | - | chr8_3:4082298-4082317 | None:intergenic | 65.0% | |
| CAGCAGAGGAAGGAGGGGGA+GGG | + | chr8_3:4082300-4082319 | Msa1270770:CDS | 65.0% | |
| AGCAGAGGAAGGAGGGGGAG+GGG | + | chr8_3:4082301-4082320 | Msa1270770:CDS | 65.0% | |
| !! | GGGGAGTCAGGAGGAGCGTC+GGG | + | chr8_3:4080727-4080746 | Msa1270770:intron | 70.0% |
| CCTCCCCCTCCTTCCTCTGC+TGG | - | chr8_3:4082302-4082321 | None:intergenic | 70.0% | |
| CCAGCAGAGGAAGGAGGGGG+AGG | + | chr8_3:4082299-4082318 | Msa1270770:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 4079172 | 4084342 | 4079172 | ID=Msa1270770;Name=Msa1270770 |
| chr8_3 | mRNA | 4079172 | 4084342 | 4079172 | ID=Msa1270770-mRNA-1;Parent=Msa1270770;Name=Msa1270770-mRNA-1;_AED=0.35;_eAED=0.35;_QI=126|1|1|1|1|1|5|212|447 |
| chr8_3 | exon | 4079172 | 4079654 | 4079172 | ID=Msa1270770-mRNA-1:exon:1314;Parent=Msa1270770-mRNA-1 |
| chr8_3 | exon | 4081070 | 4081195 | 4081070 | ID=Msa1270770-mRNA-1:exon:1315;Parent=Msa1270770-mRNA-1 |
| chr8_3 | exon | 4082275 | 4082589 | 4082275 | ID=Msa1270770-mRNA-1:exon:1316;Parent=Msa1270770-mRNA-1 |
| chr8_3 | exon | 4083210 | 4083338 | 4083210 | ID=Msa1270770-mRNA-1:exon:1317;Parent=Msa1270770-mRNA-1 |
| chr8_3 | exon | 4083714 | 4084342 | 4083714 | ID=Msa1270770-mRNA-1:exon:1318;Parent=Msa1270770-mRNA-1 |
| chr8_3 | five_prime_UTR | 4079172 | 4079297 | 4079172 | ID=Msa1270770-mRNA-1:five_prime_utr;Parent=Msa1270770-mRNA-1 |
| chr8_3 | CDS | 4079298 | 4079654 | 4079298 | ID=Msa1270770-mRNA-1:cds;Parent=Msa1270770-mRNA-1 |
| chr8_3 | CDS | 4081070 | 4081195 | 4081070 | ID=Msa1270770-mRNA-1:cds;Parent=Msa1270770-mRNA-1 |
| chr8_3 | CDS | 4082275 | 4082589 | 4082275 | ID=Msa1270770-mRNA-1:cds;Parent=Msa1270770-mRNA-1 |
| chr8_3 | CDS | 4083210 | 4083338 | 4083210 | ID=Msa1270770-mRNA-1:cds;Parent=Msa1270770-mRNA-1 |
| chr8_3 | CDS | 4083714 | 4084130 | 4083714 | ID=Msa1270770-mRNA-1:cds;Parent=Msa1270770-mRNA-1 |
| chr8_3 | three_prime_UTR | 4084131 | 4084342 | 4084131 | ID=Msa1270770-mRNA-1:three_prime_utr;Parent=Msa1270770-mRNA-1 |
| Gene Sequence |
| Protein sequence |
