AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0231370

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 273 sgRNAs with CRISPR-Local

Find 688 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAATTGGAATTTGGATATTT+TGG 0.045907 2_2:-3587607 Msa0231370:three_prime_UTR
ACAACACTCTAATTGGAATT+TGG 0.154259 2_2:-3587616 Msa0231370:three_prime_UTR
TATAAACCAAATTAAGTTAT+TGG 0.182917 2_2:-3585049 Msa0231370:three_prime_UTR
GATGAAACCCACACAGTTTC+AGG 0.197809 2_2:+3587933 None:intergenic
GATCTTCACAACACTCTAAT+TGG 0.198102 2_2:-3587623 Msa0231370:three_prime_UTR
ACTGTGAAATTGAACTTTCT+TGG 0.229055 2_2:-3584773 Msa0231370:three_prime_UTR
GTGATATAGAGTTGAATTTA+TGG 0.231026 2_2:+3591073 None:intergenic
CCGAGAGCAAATGACAATTT+TGG 0.231934 2_2:+3585009 None:intergenic
AAATCATTAGTTGGCTCTTT+TGG 0.244228 2_2:-3588861 Msa0231370:three_prime_UTR
ATTATACACGTCCTTAATTC+TGG 0.245415 2_2:-3588084 Msa0231370:three_prime_UTR
GAAAATTAAGAAGGATATTA+TGG 0.250941 2_2:-3588708 Msa0231370:three_prime_UTR
GCCATGGGTGGAGGTATATA+TGG 0.252048 2_2:-3586833 Msa0231370:three_prime_UTR
TTTCCCAATGGTCTATGTTT+TGG 0.252201 2_2:-3588207 Msa0231370:three_prime_UTR
ATCATAATGTTCATATTATA+AGG 0.274507 2_2:+3588441 None:intergenic
TTTCTGCTTCATAAGAAATA+AGG 0.279402 2_2:+3588331 None:intergenic
AGTTCAATTTCACAGTAAAT+AGG 0.280307 2_2:+3584780 None:intergenic
AGATGAAAGTATGGAGGAAT+TGG 0.288550 2_2:+3591102 None:intergenic
CATCTTAGTTGTAGTAAAAT+AGG 0.293989 2_2:+3586486 None:intergenic
GTACCATAAAAGTGGTGATA+TGG 0.295118 2_2:+3587755 None:intergenic
AGGAAAATGGCTACACAAAC+AGG 0.297084 2_2:+3586033 None:intergenic
CAAAATGTTAAGCAGGAAAA+TGG 0.304930 2_2:+3586020 None:intergenic
AAACTTGAAATAGAGGAAAA+AGG 0.305445 2_2:+3591033 None:intergenic
AATTAGCATGCTCCACTTCC+AGG 0.305966 2_2:-3588636 Msa0231370:three_prime_UTR
ATTAAAACTTATTAGATGAT+AGG 0.311520 2_2:-3587000 Msa0231370:three_prime_UTR
ATTTCCATCAATTTACTTGC+TGG 0.318017 2_2:-3587433 Msa0231370:three_prime_UTR
GGACTGAGCTCCATCCTTGC+AGG 0.322550 2_2:-3588063 Msa0231370:three_prime_UTR
TTCAATCTACATTTATCATT+GGG 0.322616 2_2:-3587316 Msa0231370:three_prime_UTR
AAGAAAGGAAATGGTTATAA+AGG 0.322988 2_2:+3588681 None:intergenic
ATAAACCAAATTAAGTTATT+GGG 0.330530 2_2:-3585048 Msa0231370:three_prime_UTR
TGTAAACAATAATTAGTTGA+TGG 0.335175 2_2:+3587255 None:intergenic
CTTGAGTTCTGAGGAGGTTC+GGG 0.335431 2_2:-3585897 Msa0231370:three_prime_UTR
TTGTTGAGGGCTTGAGGTTG+AGG 0.338832 2_2:-3587728 Msa0231370:three_prime_UTR
TTTCAATCTACATTTATCAT+TGG 0.340260 2_2:-3587317 Msa0231370:three_prime_UTR
CATCTCTATTGGCTTGCATT+TGG 0.342186 2_2:+3595402 None:intergenic
TGACTAGTTGATGGCCTTGT+TGG 0.344982 2_2:-3588414 Msa0231370:three_prime_UTR
CAGAAGATAGGATTTATAAT+AGG 0.353731 2_2:-3587218 Msa0231370:three_prime_UTR
GTAGCATAGCCCTTAGTCTA+TGG 0.359910 2_2:+3588502 None:intergenic
TGGAGCTCAGTCCAGAATTA+AGG 0.361479 2_2:+3588073 None:intergenic
CCAAACAAATGTTTCAAAAC+TGG 0.362348 2_2:+3586293 None:intergenic
TATATGGGGATAAGTTGTTT+AGG 0.364529 2_2:-3586817 Msa0231370:three_prime_UTR
CTCATTGGGGATCGGGTGTT+GGG 0.366093 2_2:-3590732 Msa0231370:CDS
TTGAAACATTTGTTTGGATC+AGG 0.367757 2_2:-3586287 Msa0231370:three_prime_UTR
CTTGATGCCTGGACCCTTTG+AGG 0.369164 2_2:+3586741 None:intergenic
GCCTCAATATTCTTTATCAT+TGG 0.372760 2_2:+3586075 None:intergenic
GTGACAAAGGCACTATAAAA+TGG 0.372993 2_2:+3586234 None:intergenic
ACATGGTTATGCATCTCTAT+TGG 0.373236 2_2:+3595391 None:intergenic
TAATAATTATGTAGAGGAAT+AGG 0.375118 2_2:-3588374 Msa0231370:three_prime_UTR
CATGCTGTCCTTGGATTGCT+TGG 0.376043 2_2:+3595299 None:intergenic
TTATGGTACTTATTTGTTGA+GGG 0.376396 2_2:-3587741 Msa0231370:three_prime_UTR
GGAAGCATTGGTTTGGCCTA+TGG 0.378733 2_2:+3595320 None:intergenic
GGAAAGAAGAAGAGAAGAAA+AGG 0.379667 2_2:-3588957 Msa0231370:three_prime_UTR
CCTCCTTCCATTGTAGACTA+TGG 0.380690 2_2:+3595494 None:intergenic
TGTCGGCATATAGTGTTTCT+TGG 0.382332 2_2:+3587025 None:intergenic
GCTCATTGGGGATCGGGTGT+TGG 0.387124 2_2:-3590733 Msa0231370:CDS
TGTTGAGGGCTTGAGGTTGA+GGG 0.388561 2_2:-3587727 Msa0231370:three_prime_UTR
GCTTGAGTTCTGAGGAGGTT+CGG 0.389141 2_2:-3585898 Msa0231370:three_prime_UTR
CTATCGTTAGAGAGAATACT+TGG 0.393627 2_2:-3587191 Msa0231370:three_prime_UTR
CTCTTATCATCCATAGACTA+AGG 0.394469 2_2:-3588512 Msa0231370:three_prime_UTR
AAGACCTATTTACTAGGTAA+TGG 0.395659 2_2:-3588554 Msa0231370:three_prime_UTR
TTGGCATCTCACATAGAAAC+TGG 0.398445 2_2:+3586094 None:intergenic
TTCTTGTCTCGGCTCGGCAT+CGG 0.398745 2_2:+3595537 None:intergenic
CTGCTTACTTCTAGTTCCAT+TGG 0.401070 2_2:-3587380 Msa0231370:three_prime_UTR
GATGACAGTCTTGTCTTGTA+TGG 0.401435 2_2:-3587140 Msa0231370:three_prime_UTR
GTTATGTTTGATGATCAAAT+TGG 0.402165 2_2:-3586339 Msa0231370:three_prime_UTR
GGTCACCTGCTATACGAATA+TGG 0.405476 2_2:+3590595 None:intergenic
TGGTTATCGAGATGAAAGTA+TGG 0.406529 2_2:+3591093 None:intergenic
GGATGGAGTGGAGAAGCAAT+AGG 0.408916 2_2:+3588468 None:intergenic
GATGGAGTGGAGAAGCAATA+GGG 0.409210 2_2:+3588469 None:intergenic
CTTGGATTGCTTGGAAGCAT+TGG 0.415331 2_2:+3595308 None:intergenic
CTGTAAGCCGGCTTGATGCC+TGG 0.417767 2_2:+3586730 None:intergenic
ATGCTTTCACAGGCGTCAAC+AGG 0.418851 2_2:-3585996 Msa0231370:three_prime_UTR
TACTGACCCGAGGCTTGAAC+TGG 0.420709 2_2:+3589008 None:intergenic
AAAGGATGCTTGAGGAAAAC+AGG 0.423850 2_2:-3585212 Msa0231370:three_prime_UTR
GAAAATACCTGTCTCCTTTG+TGG 0.424492 2_2:-3588312 Msa0231370:three_prime_UTR
GAGCTCTAGCATGCTGTCCT+TGG 0.424623 2_2:+3595290 None:intergenic
TACTTTAATTTCTTCTCCAC+AGG 0.425351 2_2:-3586402 Msa0231370:three_prime_UTR
ATTTAACAAAAGAAAGGAAA+TGG 0.431308 2_2:+3588672 None:intergenic
GAAGGACTTCTGCGGCCTCT+TGG 0.433618 2_2:+3589129 None:intergenic
GCACAAAAGGTGTATATCAT+TGG 0.439233 2_2:-3588748 Msa0231370:three_prime_UTR
TTATTGTTTACATGAATGAA+TGG 0.443414 2_2:-3587244 Msa0231370:three_prime_UTR
TCTTCATCATTTGTGTGAGA+TGG 0.445772 2_2:-3587892 Msa0231370:three_prime_UTR
AAGCACTAGAGCAGCAAAGA+AGG 0.446128 2_2:-3585161 Msa0231370:three_prime_UTR
TTCTTGTCTCGGCTTGGCAT+AGG 0.446510 2_2:+3595429 None:intergenic
TATTAGATGATAGGGTGTTA+TGG 0.447018 2_2:-3586991 Msa0231370:three_prime_UTR
ATCAAATAGAAATGAAGAAA+AGG 0.447219 2_2:+3588900 None:intergenic
GCATCCAGCAAGTAAATTGA+TGG 0.449244 2_2:+3587429 None:intergenic
CCCCACATTTGGTGGGGCAA+AGG 0.449571 2_2:-3586861 Msa0231370:intron
TTGTCTCGGCTCGGCATCGG+AGG 0.451239 2_2:+3595540 None:intergenic
CATCAAGCCGGCTTACAGAC+TGG 0.452805 2_2:-3586725 Msa0231370:three_prime_UTR
GAGAGAATACTTGGGTAGAC+AGG 0.453070 2_2:-3587182 Msa0231370:three_prime_UTR
TTTATGGTACTTATTTGTTG+AGG 0.453769 2_2:-3587742 Msa0231370:three_prime_UTR
TTAAGATGGAAATCATTAGT+TGG 0.455459 2_2:-3588870 Msa0231370:three_prime_UTR
AGAAAATTAAACAGCCTCCT+TGG 0.458712 2_2:-3584904 Msa0231370:three_prime_UTR
TACCATAAAAGTGGTGATAT+GGG 0.460955 2_2:+3587756 None:intergenic
TGAAGGGAAACTTGAAATAG+AGG 0.461266 2_2:+3591026 None:intergenic
AGCCATGCGAAGGAAGAAAC+AGG 0.462755 2_2:-3585088 Msa0231370:three_prime_UTR
TAGAAGAAGAGACTGCTAAG+AGG 0.463110 2_2:-3585955 Msa0231370:three_prime_UTR
GATAGTTCAATAGAAAAGGT+AGG 0.466286 2_2:-3587053 Msa0231370:three_prime_UTR
ATTGCTTGGAAGCATTGGTT+TGG 0.467302 2_2:+3595313 None:intergenic
CGACGCCAAGTAGTTGTAGA+AGG 0.467557 2_2:+3589111 None:intergenic
GATGAAAGTATGGAGGAATT+GGG 0.467994 2_2:+3591103 None:intergenic
TTCCTGTTTCTTCCTTCGCA+TGG 0.468531 2_2:+3585086 None:intergenic
AAGAATCGCTCTGAACAATC+AGG 0.470747 2_2:+3587911 None:intergenic
TCTATTGAACTATCCATAGC+TGG 0.471387 2_2:+3587062 None:intergenic
GTTCAATTCTTTGGATGCAA+TGG 0.472104 2_2:-3586673 Msa0231370:three_prime_UTR
CTGCTATATCTATGTCCAAC+CGG 0.472815 2_2:+3590646 None:intergenic
TATGGATAGTTCAATAGAAA+AGG 0.474180 2_2:-3587057 Msa0231370:three_prime_UTR
GGTGGAGTATTTAAGTGGCT+TGG 0.476098 2_2:-3587547 Msa0231370:three_prime_UTR
CTTAAAAGTTAGCAGTCAAA+GGG 0.478948 2_2:+3587518 None:intergenic
AATGAATGGTTACAGAAGAT+AGG 0.480436 2_2:-3587230 Msa0231370:three_prime_UTR
TCAAGGAGGTTGACCAGCTA+TGG 0.482428 2_2:-3587075 Msa0231370:three_prime_UTR
AACGAAAAGCAGGGGAGAAT+AGG 0.483486 2_2:+3588167 None:intergenic
TTGTCTCGGCTTGGCATAGG+AGG 0.484275 2_2:+3595432 None:intergenic
TTTGGATCAGGATTCGATAG+AGG 0.487654 2_2:-3586275 Msa0231370:three_prime_UTR
AGTTAAGTGATTAAAGCATC+AGG 0.489615 2_2:+3586524 None:intergenic
CCATGGGTGGAGGTATATAT+GGG 0.489823 2_2:-3586832 Msa0231370:three_prime_UTR
TTAAAACTTATTAGATGATA+GGG 0.491746 2_2:-3586999 Msa0231370:three_prime_UTR
GACAATGACAATGTTGCTAA+AGG 0.493908 2_2:+3587096 None:intergenic
GAACTGGAAGATTTATGAGC+AGG 0.495314 2_2:+3589024 None:intergenic
ATCAGTAGATGCCCTGGAAG+TGG 0.496697 2_2:+3588624 None:intergenic
CAACCAAAACATAGACCATT+GGG 0.498649 2_2:+3588204 None:intergenic
GTATGAATTTGCAGAGGGGT+TGG 0.499250 2_2:-3588256 Msa0231370:three_prime_UTR
ATCTTGTGACCCACCTCAAA+GGG 0.499654 2_2:-3586754 Msa0231370:three_prime_UTR
TCATTTGTGTGAGATGGAAA+AGG 0.500228 2_2:-3587886 Msa0231370:three_prime_UTR
ACAAATAAGTACCATAAAAG+TGG 0.500869 2_2:+3587747 None:intergenic
ACTCCTCATTCTCTCTGCGC+TGG 0.502425 2_2:-3587462 Msa0231370:three_prime_UTR
GATTCAAAGGCGGTTGGAAG+AGG 0.503084 2_2:-3585870 Msa0231370:three_prime_UTR
ATAATTACTGCCTGCAAGGA+TGG 0.505783 2_2:+3588053 None:intergenic
CCAAAATTGTCATTTGCTCT+CGG 0.505819 2_2:-3585009 Msa0231370:three_prime_UTR
TGATTCAAGACCTATTTACT+AGG 0.508187 2_2:-3588560 Msa0231370:three_prime_UTR
AAGCATACAAAATGTTAAGC+AGG 0.510269 2_2:+3586013 None:intergenic
GTAGCTTACTCCCATCTAGC+GGG 0.512052 2_2:-3586950 Msa0231370:three_prime_UTR
AGAAGAAGAGACTGCTAAGA+GGG 0.519476 2_2:-3585954 Msa0231370:three_prime_UTR
ATGAAACCCACACAGTTTCA+GGG 0.519752 2_2:+3587934 None:intergenic
TGGGGCAAAGGTCTTAGCCA+TGG 0.520088 2_2:-3586849 Msa0231370:three_prime_UTR
TCATAACTTCTATGCACAAA+AGG 0.520753 2_2:-3588761 Msa0231370:three_prime_UTR
GACAAATATTATGTGGCTGT+TGG 0.520856 2_2:+3587961 None:intergenic
CCTCATTCTCTCTGCGCTGG+TGG 0.521569 2_2:-3587459 Msa0231370:three_prime_UTR
CCACCAGCGCAGAGAGAATG+AGG 0.521711 2_2:+3587459 None:intergenic
GATGCCTGGACCCTTTGAGG+TGG 0.523232 2_2:+3586744 None:intergenic
AAATCTTCCAGTTCAAGCCT+CGG 0.525335 2_2:-3589015 Msa0231370:CDS
ACTTATTTGTTGAGGGCTTG+AGG 0.525631 2_2:-3587734 Msa0231370:three_prime_UTR
GGTTAGTTTGTCGTTGATTG+TGG 0.525923 2_2:-3586205 Msa0231370:three_prime_UTR
CGGTGAATGCCTACGCCTGT+AGG 0.526706 2_2:+3590672 None:intergenic
ACAACCAAAACATAGACCAT+TGG 0.527338 2_2:+3588203 None:intergenic
TGCTCGGTGGAGTATTTAAG+TGG 0.527687 2_2:-3587552 Msa0231370:three_prime_UTR
ATACAAATCAGTAGATGCCC+TGG 0.528242 2_2:+3588618 None:intergenic
TTCTCGTATGAATTTGCAGA+GGG 0.528831 2_2:-3588261 Msa0231370:three_prime_UTR
GGTGGAGATTCAAAGGCGGT+TGG 0.529065 2_2:-3585876 Msa0231370:three_prime_UTR
CCTTAAAAGTTAGCAGTCAA+AGG 0.532865 2_2:+3587517 None:intergenic
AATCTTCCAGTTCAAGCCTC+GGG 0.534551 2_2:-3589014 Msa0231370:CDS
ATGCCTGGACCCTTTGAGGT+GGG 0.534925 2_2:+3586745 None:intergenic
GATCCCGATCGCCTCCCTAC+AGG 0.535020 2_2:-3590687 Msa0231370:CDS
AGAAAGTAATAAATATAAGC+TGG 0.535290 2_2:+3587988 None:intergenic
CTGATATCCACAAAGGAGAC+AGG 0.535783 2_2:+3588305 None:intergenic
TTCTCCACAGGCTTATCTGA+AGG 0.538353 2_2:-3586390 Msa0231370:three_prime_UTR
GGTCTCCATATTCGTATAGC+AGG 0.539748 2_2:-3590600 Msa0231370:intron
ATAACAATTTAACAAAAGAA+AGG 0.541493 2_2:+3588666 None:intergenic
GATACAGAAGACAAAGAAGT+AGG 0.542047 2_2:-3589062 Msa0231370:CDS
TGGATGATAAGAGCAAAAGC+AGG 0.543002 2_2:+3588522 None:intergenic
TGATCAGTATAATGAAGACT+AGG 0.543021 2_2:+3587406 None:intergenic
GGGGCAAAGGTCTTAGCCAT+GGG 0.543096 2_2:-3586848 Msa0231370:three_prime_UTR
CGGGATCGCGACAAGTCTCT+AGG 0.543214 2_2:+3590703 None:intergenic
ACGCCTGTAGGGAGGCGATC+GGG 0.543352 2_2:+3590684 None:intergenic
TACGCCTGTAGGGAGGCGAT+CGG 0.544832 2_2:+3590683 None:intergenic
TAGCAACATTGTCATTGTCA+AGG 0.544835 2_2:-3587092 Msa0231370:three_prime_UTR
ATAGTTCAATAGAAAAGGTA+GGG 0.545723 2_2:-3587052 Msa0231370:three_prime_UTR
GGTGAATGCCTACGCCTGTA+GGG 0.549240 2_2:+3590673 None:intergenic
TGACCCACCTCAAAGGGTCC+AGG 0.551766 2_2:-3586748 Msa0231370:three_prime_UTR
CTGCTTCATAAGAAATAAGG+TGG 0.552758 2_2:+3588334 None:intergenic
GAAGTCCTTCTACAACTACT+TGG 0.553770 2_2:-3589116 Msa0231370:CDS
AATCTTGTGACCCACCTCAA+AGG 0.555614 2_2:-3586755 Msa0231370:three_prime_UTR
AGGTTCGGGTGGAGATTCAA+AGG 0.555717 2_2:-3585883 Msa0231370:three_prime_UTR
ATGATTCTTAAGAAAACCAA+TGG 0.556624 2_2:+3587364 None:intergenic
GCGTAGGCATTCACCGTCAC+CGG 0.557546 2_2:-3590665 Msa0231370:CDS
TGTCTCGGCTCGGCATCGGA+GGG 0.557650 2_2:+3595541 None:intergenic
ATTACATTGGGGCTGAAACA+TGG 0.559376 2_2:-3586559 Msa0231370:three_prime_UTR
AAGAGAAAGAAGATCTTGAA+AGG 0.560517 2_2:-3585230 Msa0231370:three_prime_UTR
GATCGCCTCCCTACAGGCGT+AGG 0.561425 2_2:-3590681 Msa0231370:CDS
AAACAATCCAGTCTGTAAGC+CGG 0.564048 2_2:+3586718 None:intergenic
ATCATTGGTAAGACACAGAC+TGG 0.567059 2_2:-3588733 Msa0231370:three_prime_UTR
TGCTATACGAATATGGAGAC+CGG 0.567909 2_2:+3590602 None:intergenic
CTCATGTAGCGAAAATTAAG+TGG 0.569915 2_2:+3584818 None:intergenic
AGAAAGAAGAAGCCATGCGA+AGG 0.571739 2_2:-3585098 Msa0231370:three_prime_UTR
GCCAATGATAAAGAATATTG+AGG 0.572534 2_2:-3586076 Msa0231370:three_prime_UTR
GGAGCAGACGTGATAGAAGC+CGG 0.572642 2_2:-3590621 Msa0231370:CDS
ATGTTCATATTATAAGGCTA+AGG 0.572860 2_2:+3588447 None:intergenic
AGAAAATAATAATTATGTAG+AGG 0.573689 2_2:-3588380 Msa0231370:three_prime_UTR
AGACTGGCTGAAAATTAAGA+AGG 0.573789 2_2:-3588717 Msa0231370:three_prime_UTR
AAGGTCTTAGCCATGGGTGG+AGG 0.574972 2_2:-3586842 Msa0231370:three_prime_UTR
TCGAGTCCCTGAAACTGTGT+GGG 0.576761 2_2:-3587940 Msa0231370:three_prime_UTR
TGATGAAAGCTTGAGTTCTG+AGG 0.576772 2_2:-3585906 Msa0231370:three_prime_UTR
TCAATCTACATTTATCATTG+GGG 0.578004 2_2:-3587315 Msa0231370:three_prime_UTR
CAAGTATTCTCTCTAACGAT+AGG 0.578536 2_2:+3587192 None:intergenic
GGGCCATAGTCTACAATGGA+AGG 0.579143 2_2:-3595497 Msa0231370:CDS
CCCATATATACCTCCACCCA+TGG 0.579545 2_2:+3586832 None:intergenic
GCGAAGGAAGAAACAGGAAG+AGG 0.579778 2_2:-3585082 Msa0231370:three_prime_UTR
AGATTGAAGAATCTCAGAGA+AGG 0.580118 2_2:-3585185 Msa0231370:three_prime_UTR
GGCTTATCTGAAGGAAGGTA+CGG 0.580410 2_2:-3586381 Msa0231370:three_prime_UTR
AGAGCAGCAAAGAAGGGAGG+AGG 0.582366 2_2:-3585154 Msa0231370:three_prime_UTR
TGTTGATGCATTCAAACCAT+AGG 0.584854 2_2:-3595336 Msa0231370:CDS
ATTCAAAGGCGGTTGGAAGA+GGG 0.585226 2_2:-3585869 Msa0231370:three_prime_UTR
TCATATTATAAGGCTAAGGA+TGG 0.589586 2_2:+3588451 None:intergenic
GCAAAGGTCTTAGCCATGGG+TGG 0.589772 2_2:-3586845 Msa0231370:three_prime_UTR
TCTTATCATCCATAGACTAA+GGG 0.590548 2_2:-3588511 Msa0231370:three_prime_UTR
GATTGAAGAATCTCAGAGAA+GGG 0.591569 2_2:-3585184 Msa0231370:three_prime_UTR
TTTACTCTAATAAAATGTCA+AGG 0.591746 2_2:+3586618 None:intergenic
ACCAACATGTTGAAAACCAA+TGG 0.592575 2_2:-3595258 Msa0231370:CDS
TGTCTCGGCTTGGCATAGGA+GGG 0.593285 2_2:+3595433 None:intergenic
GATCAGTATAATGAAGACTA+GGG 0.595366 2_2:+3587407 None:intergenic
CTAGACAAATACTTGCATAA+CGG 0.595727 2_2:+3584976 None:intergenic
ACTAACCTCCATGGTGACAA+AGG 0.595740 2_2:+3586221 None:intergenic
CAATGCTTCCAAGCAATCCA+AGG 0.596904 2_2:-3595307 Msa0231370:CDS
AAAGGGTCCAGGCATCAAGC+CGG 0.598580 2_2:-3586737 Msa0231370:three_prime_UTR
CGGTTGGACATAGATATAGC+AGG 0.598995 2_2:-3590645 Msa0231370:CDS
TATCTATGTCCAACCGGTGA+CGG 0.599067 2_2:+3590652 None:intergenic
AGCACTAGAGCAGCAAAGAA+GGG 0.600602 2_2:-3585160 Msa0231370:three_prime_UTR
TTATAGTGCCTTTGTCACCA+TGG 0.603897 2_2:-3586229 Msa0231370:three_prime_UTR
AAACTGCTATTGAGAAACAA+AGG 0.604603 2_2:-3588978 Msa0231370:three_prime_UTR
CAACATTGTCATTGTCAAGG+AGG 0.604827 2_2:-3587089 Msa0231370:three_prime_UTR
AGATCTTGAAAGGATGCTTG+AGG 0.606087 2_2:-3585220 Msa0231370:three_prime_UTR
CTAGATGGGAGTAAGCTACA+AGG 0.608624 2_2:+3586954 None:intergenic
GGAAAATGGCTACACAAACA+GGG 0.608630 2_2:+3586034 None:intergenic
TGAAAGCTTGAGTTCTGAGG+AGG 0.609084 2_2:-3585903 Msa0231370:three_prime_UTR
AGTCGTTCTATTTCACCAAG+AGG 0.610962 2_2:-3589144 Msa0231370:CDS
TTATAAGGCTAAGGATGGAG+TGG 0.611329 2_2:+3588456 None:intergenic
GGGACTCGACAAATATTATG+TGG 0.612449 2_2:+3587954 None:intergenic
GAGTTCTGAGGAGGTTCGGG+TGG 0.613880 2_2:-3585894 Msa0231370:three_prime_UTR
TGTGATAATTACTGCCTGCA+AGG 0.614248 2_2:+3588049 None:intergenic
GGAAGGGCCATAGTCTACAA+TGG 0.615706 2_2:-3595501 Msa0231370:CDS
ATTAGCATGCTCCACTTCCA+GGG 0.616123 2_2:-3588635 Msa0231370:three_prime_UTR
ATATTGAGGCTACTTATATG+TGG 0.617501 2_2:-3586062 Msa0231370:three_prime_UTR
ATTGAGTAGTATGAGATGCT+CGG 0.617951 2_2:-3587568 Msa0231370:three_prime_UTR
ATTGGGGATCGGGTGTTGGG+AGG 0.618819 2_2:-3590729 Msa0231370:CDS
CCACAGGCTTATCTGAAGGA+AGG 0.619414 2_2:-3586386 Msa0231370:three_prime_UTR
AGGCATTCACCGTCACCGGT+TGG 0.619952 2_2:-3590661 Msa0231370:CDS
ATGGAGTGGAGAAGCAATAG+GGG 0.620445 2_2:+3588470 None:intergenic
GTCGAGTCCCTGAAACTGTG+TGG 0.622139 2_2:-3587941 Msa0231370:three_prime_UTR
AAAATCCAAACGAAAAGCAG+GGG 0.622726 2_2:+3588159 None:intergenic
TCTTATTGATGCTAAACAGA+AGG 0.623245 2_2:-3585789 Msa0231370:three_prime_UTR
TATTGATGCTAAACAGAAGG+AGG 0.623407 2_2:-3585786 Msa0231370:intron
CAACGACAAACTAACCTCCA+TGG 0.624333 2_2:+3586212 None:intergenic
TTTATGAGCAGGAGACAATG+AGG 0.628575 2_2:+3589035 None:intergenic
GATAAGTATCTAAGTACTCG+AGG 0.629578 2_2:+3587487 None:intergenic
TATCACTCACAGTGAAGCCA+AGG 0.630555 2_2:+3584887 None:intergenic
GGATGATAAGAGCAAAAGCA+GGG 0.631056 2_2:+3588523 None:intergenic
TGTAGCTTACTCCCATCTAG+CGG 0.634492 2_2:-3586951 Msa0231370:three_prime_UTR
GAATGCCTACGCCTGTAGGG+AGG 0.634739 2_2:+3590676 None:intergenic
TTTCTCGTATGAATTTGCAG+AGG 0.639094 2_2:-3588262 Msa0231370:three_prime_UTR
CACTCACAGTGAAGCCAAGG+AGG 0.652101 2_2:+3584890 None:intergenic
ATGGTTTGAATGCATCAACA+TGG 0.658908 2_2:+3595339 None:intergenic
TTATCGAGATGAAAGTATGG+AGG 0.662655 2_2:+3591096 None:intergenic
TAGATGATAGGGTGTTATGG+CGG 0.662674 2_2:-3586988 Msa0231370:three_prime_UTR
TGGTTTGAAGACACATCACA+TGG 0.669483 2_2:+3595374 None:intergenic
ACTAGAGCAGCAAAGAAGGG+AGG 0.671102 2_2:-3585157 Msa0231370:three_prime_UTR
CCATAGTCTACAATGGAAGG+AGG 0.673554 2_2:-3595494 Msa0231370:CDS
TAGTGCCTTTGTCACCATGG+AGG 0.673777 2_2:-3586226 Msa0231370:three_prime_UTR
TAGCTTACTCCCATCTAGCG+GGG 0.681837 2_2:-3586949 Msa0231370:three_prime_UTR
CCTTCCTTCAGATAAGCCTG+TGG 0.684013 2_2:+3586386 None:intergenic
GGATGCTTGAGGAAAACAGG+AGG 0.689417 2_2:-3585209 Msa0231370:three_prime_UTR
GAGTAGTATGAGATGCTCGG+TGG 0.695891 2_2:-3587565 Msa0231370:three_prime_UTR
TATCGTTAGAGAGAATACTT+GGG 0.697106 2_2:-3587190 Msa0231370:three_prime_UTR
GAAAATGGCTACACAAACAG+GGG 0.697851 2_2:+3586035 None:intergenic
TTCGGGTGGAGATTCAAAGG+CGG 0.699828 2_2:-3585880 Msa0231370:three_prime_UTR
GGAGGTCATATACAAGACCA+AGG 0.700407 2_2:-3595476 Msa0231370:CDS
ACATATACTGATATCCACAA+AGG 0.701834 2_2:+3588298 None:intergenic
GCATCTCATACTACTCAATG+TGG 0.711801 2_2:+3587572 None:intergenic
CATGGGTGGAGGTATATATG+GGG 0.712161 2_2:-3586831 Msa0231370:three_prime_UTR
TTGGACATAGATATAGCAGG+AGG 0.714825 2_2:-3590642 Msa0231370:CDS
TCTCGTATGAATTTGCAGAG+GGG 0.721047 2_2:-3588260 Msa0231370:three_prime_UTR
GTAAATAGGAGTAATAGCCG+AGG 0.723284 2_2:+3584794 None:intergenic
TTAAAAGTTAGCAGTCAAAG+GGG 0.729178 2_2:+3587519 None:intergenic
TAGTTGTAGAAGGACTTCTG+CGG 0.758272 2_2:+3589121 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAGTAAAATATAACTAAATT+AGG - chr2_2:3587517-3587536 Msa0231370:three_prime_UTR 10.0%
!! TTTAGATAAATATTGAAAAT+TGG + chr2_2:3588184-3588203 None:intergenic 10.0%
!!! AAATAATTAATATTTTGTAG+TGG - chr2_2:3588601-3588620 Msa0231370:three_prime_UTR 10.0%
!! TGAAAAAAAAAATTATAAGA+AGG + chr2_2:3592966-3592985 None:intergenic 10.0%
!!! ATTTTATTAGAGTAAATTAT+TGG - chr2_2:3593687-3593706 Msa0231370:intron 10.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr2_2:3593417-3593436 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr2_2:3593417-3593436 None:intergenic 100.0%
!!! TATGATCAAAATTTAAAGTA+AGG + chr2_2:3586816-3586835 None:intergenic 15.0%
!!! TAAAGTTTTGAAATATGTAT+AGG + chr2_2:3586844-3586863 None:intergenic 15.0%
!! AGTAAAAAAAAACAAAAGAT+TGG + chr2_2:3587202-3587221 None:intergenic 15.0%
!! AAACTCATAAAAATATGAAT+AGG - chr2_2:3587564-3587583 Msa0231370:three_prime_UTR 15.0%
!!! TTTTTTATAGATAGACAAAA+CGG + chr2_2:3587704-3587723 None:intergenic 15.0%
!! GTCTATCTATAAAAAAAAAT+TGG - chr2_2:3587708-3587727 Msa0231370:three_prime_UTR 15.0%
!!! ATGTAAATATTATTTGAGTT+TGG + chr2_2:3588704-3588723 None:intergenic 15.0%
!! TCAAGTTATTAAATGATTAT+TGG + chr2_2:3589430-3589449 None:intergenic 15.0%
!!! TCATTTAATAACTTGATAAT+TGG - chr2_2:3589434-3589453 Msa0231370:intron 15.0%
!! TTATTAATGAAAAAAATGTG+AGG - chr2_2:3590044-3590063 Msa0231370:intron 15.0%
!! TATAAATTATATTTGCTTTC+AGG - chr2_2:3590077-3590096 Msa0231370:intron 15.0%
!!! TGTAAAATAATATGTTTTAG+CGG - chr2_2:3590199-3590218 Msa0231370:intron 15.0%
!!! ATTTGATTTATGTTTTAAGA+TGG - chr2_2:3591414-3591433 Msa0231370:intron 15.0%
!! ATAACAATTTAACAAAAGAA+AGG + chr2_2:3591635-3591654 None:intergenic 15.0%
!! ATCATAATGTTCATATTATA+AGG + chr2_2:3591860-3591879 None:intergenic 15.0%
!! AGAAAATAATAATTATGTAG+AGG - chr2_2:3591918-3591937 Msa0231370:intron 15.0%
!! AAATTAAGGAAAAAAATGTA+TGG + chr2_2:3592071-3592090 None:intergenic 15.0%
!! ATTAAAACTTATTAGATGAT+AGG - chr2_2:3593298-3593317 Msa0231370:intron 15.0%
!! TTAAAACTTATTAGATGATA+GGG - chr2_2:3593299-3593318 Msa0231370:intron 15.0%
!!! TTTTAAATGAAAAGTAAGAA+CGG + chr2_2:3593655-3593674 None:intergenic 15.0%
!!! ATTTTCAATAGTATTACATT+GGG - chr2_2:3593727-3593746 Msa0231370:intron 15.0%
!! TATAAACCAAATTAAGTTAT+TGG - chr2_2:3595249-3595268 Msa0231370:CDS 15.0%
!! ATAAACCAAATTAAGTTATT+GGG - chr2_2:3595250-3595269 Msa0231370:CDS 15.0%
!! TGAAAATAAAAAAAAACCCA+AGG - chr2_2:3585342-3585361 Msa0231370:intron 20.0%
!! AACAAAACTATGATGAAAAA+CGG - chr2_2:3585973-3585992 Msa0231370:three_prime_UTR 20.0%
!! AATATGAGTAAAAATGAAAG+TGG + chr2_2:3586702-3586721 None:intergenic 20.0%
!! ACATATATCACTGTAAAAAT+TGG - chr2_2:3586764-3586783 Msa0231370:three_prime_UTR 20.0%
!! AAAAAAAATAGTGTAGATAC+CGG + chr2_2:3587084-3587103 None:intergenic 20.0%
!! ATGTTACTATCAAGTATATT+TGG - chr2_2:3587109-3587128 Msa0231370:three_prime_UTR 20.0%
!! AAACAAAAGATTGGAATTAT+CGG + chr2_2:3587193-3587212 None:intergenic 20.0%
!!! AATACATCAATAGATTTTAC+AGG - chr2_2:3587422-3587441 Msa0231370:three_prime_UTR 20.0%
!! GTAAAAATGTTAAAATTGTC+AGG - chr2_2:3587609-3587628 Msa0231370:three_prime_UTR 20.0%
!!! ATAATTTTTGACAATGAACA+AGG + chr2_2:3587911-3587930 None:intergenic 20.0%
!! ATATTTATCTAAACAAGCAA+AGG - chr2_2:3588191-3588210 Msa0231370:three_prime_UTR 20.0%
!!! TTAATTACGTATTTTTGATG+AGG + chr2_2:3588570-3588589 None:intergenic 20.0%
!!! AAGAAGATATCTTACTTTTA+AGG + chr2_2:3588756-3588775 None:intergenic 20.0%
!! CAATACTAAAATGTCAATAA+AGG + chr2_2:3588793-3588812 None:intergenic 20.0%
!! AAATTGTTATAAGTACTTTG+TGG + chr2_2:3588993-3589012 None:intergenic 20.0%
!!! GTACTTATAACAATTTTCTA+CGG - chr2_2:3588997-3589016 Msa0231370:exon 20.0%
!! AATAGGAATTAGTCAATAAT+TGG + chr2_2:3589400-3589419 None:intergenic 20.0%
!! GAAAAATAAACATTCAAACA+GGG + chr2_2:3589727-3589746 None:intergenic 20.0%
!! AGAAAAATAAACATTCAAAC+AGG + chr2_2:3589728-3589747 None:intergenic 20.0%
!! TAATAACTAATCCATATTCA+AGG + chr2_2:3590030-3590049 None:intergenic 20.0%
!!! TGGTTAATTAAATGCAATTT+TGG + chr2_2:3590156-3590175 None:intergenic 20.0%
!! AAAATTGCATTTAATTAACC+AGG - chr2_2:3590155-3590174 Msa0231370:intron 20.0%
!! AAATTGCATTTAATTAACCA+GGG - chr2_2:3590156-3590175 Msa0231370:intron 20.0%
!!! GTAAAATAATATGTTTTAGC+GGG - chr2_2:3590200-3590219 Msa0231370:intron 20.0%
!!! TAAAATAATATGTTTTAGCG+GGG - chr2_2:3590201-3590220 Msa0231370:intron 20.0%
!! CAAATAAGACGTTAATATAA+TGG + chr2_2:3590239-3590258 None:intergenic 20.0%
!!! CATTATATTAACGTCTTATT+TGG - chr2_2:3590237-3590256 Msa0231370:intron 20.0%
!! CTCATTAATGAAACATATAT+AGG - chr2_2:3590814-3590833 Msa0231370:intron 20.0%
!! ATCAAATAGAAATGAAGAAA+AGG + chr2_2:3591401-3591420 None:intergenic 20.0%
!! GAAAATTAAGAAGGATATTA+TGG - chr2_2:3591590-3591609 Msa0231370:intron 20.0%
!! ATTTAACAAAAGAAAGGAAA+TGG + chr2_2:3591629-3591648 None:intergenic 20.0%
!!! TTTTGTTAAATTGTTATAGC+TGG - chr2_2:3591638-3591657 Msa0231370:intron 20.0%
!! TAATAATTATGTAGAGGAAT+AGG - chr2_2:3591924-3591943 Msa0231370:intron 20.0%
!! AGAAAGTAATAAATATAAGC+TGG + chr2_2:3592313-3592332 None:intergenic 20.0%
!!! TAATTGGAATTTGGATATTT+TGG - chr2_2:3592691-3592710 Msa0231370:intron 20.0%
!!! AATTGGAATTTGGATATTTT+GGG - chr2_2:3592692-3592711 Msa0231370:intron 20.0%
!! TTTCAATCTACATTTATCAT+TGG - chr2_2:3592981-3593000 Msa0231370:intron 20.0%
!! TTCAATCTACATTTATCATT+GGG - chr2_2:3592982-3593001 Msa0231370:intron 20.0%
!! TGTAAACAATAATTAGTTGA+TGG + chr2_2:3593046-3593065 None:intergenic 20.0%
!! TTATTGTTTACATGAATGAA+TGG - chr2_2:3593054-3593073 Msa0231370:intron 20.0%
!!! CTAATAAGTTTTAATAGTGT+CGG + chr2_2:3593293-3593312 None:intergenic 20.0%
!! TTTACTCTAATAAAATGTCA+AGG + chr2_2:3593683-3593702 None:intergenic 20.0%
!!! CATTTTCAATAGTATTACAT+TGG - chr2_2:3593726-3593745 Msa0231370:intron 20.0%
!!! TTTTCAATAGTATTACATTG+GGG - chr2_2:3593728-3593747 Msa0231370:intron 20.0%
!! GTAAGTGTAAAAAGAAAAAA+GGG - chr2_2:3594136-3594155 Msa0231370:intron 20.0%
!! TAAGTGTAAAAAGAAAAAAG+GGG - chr2_2:3594137-3594156 Msa0231370:intron 20.0%
!! TTGCAAATTCAAAGATTAAA+AGG + chr2_2:3594673-3594692 None:intergenic 20.0%
!!! AATTTGTTGATTTGATATGA+TGG - chr2_2:3594692-3594711 Msa0231370:intron 20.0%
!!! TTTTTCCCAATAACTTAATT+TGG + chr2_2:3595258-3595277 None:intergenic 20.0%
! CATAGTTTGAGAATTAACTT+TGG + chr2_2:3585320-3585339 None:intergenic 25.0%
!!! CTCTCATTTACTGAATTTTT+TGG + chr2_2:3585593-3585612 None:intergenic 25.0%
! AATTTGTCATCAGAATTTCT+GGG - chr2_2:3585784-3585803 Msa0231370:intron 25.0%
! TGATTCAATTTGACAATTGA+GGG + chr2_2:3585887-3585906 None:intergenic 25.0%
! AAAACGTAAAACCTAGAATT+TGG - chr2_2:3585933-3585952 Msa0231370:three_prime_UTR 25.0%
! AAACGTAAAACCTAGAATTT+GGG - chr2_2:3585934-3585953 Msa0231370:three_prime_UTR 25.0%
!! ATTTTCAGTTTCTTAATCTC+TGG + chr2_2:3586048-3586067 None:intergenic 25.0%
!! TTTGGAAGTAAGGATATTTT+CGG + chr2_2:3586650-3586669 None:intergenic 25.0%
! AAGTGTTAAATTTGGAAGTA+AGG + chr2_2:3586660-3586679 None:intergenic 25.0%
! TACTTCCAAATTTAACACTT+TGG - chr2_2:3586660-3586679 Msa0231370:three_prime_UTR 25.0%
! AAATTATATCATTCCTATCG+AGG - chr2_2:3587924-3587943 Msa0231370:three_prime_UTR 25.0%
! TTCATTGAACAAACAAACAA+AGG - chr2_2:3588155-3588174 Msa0231370:three_prime_UTR 25.0%
! TTTCTTATAGTTAAAGAGGA+GGG - chr2_2:3588422-3588441 Msa0231370:three_prime_UTR 25.0%
!! AATATTTTGTAGTGGCAAAA+TGG - chr2_2:3588609-3588628 Msa0231370:three_prime_UTR 25.0%
! ATGGAAAGATTAATAACTTC+AGG - chr2_2:3588628-3588647 Msa0231370:three_prime_UTR 25.0%
! TGGAAAGATTAATAACTTCA+GGG - chr2_2:3588629-3588648 Msa0231370:three_prime_UTR 25.0%
!! TATTTGAGTTTGGCTTAAAT+AGG + chr2_2:3588694-3588713 None:intergenic 25.0%
!!! CATCAAGTAAGTACTTTTTT+TGG - chr2_2:3588943-3588962 Msa0231370:three_prime_UTR 25.0%
! AACCCTAGAAAATGAAAATT+GGG + chr2_2:3589159-3589178 None:intergenic 25.0%
! AAACCCTAGAAAATGAAAAT+TGG + chr2_2:3589160-3589179 None:intergenic 25.0%
! GTGATATAGAGTTGAATTTA+TGG + chr2_2:3589228-3589247 None:intergenic 25.0%
! AAACTTGAAATAGAGGAAAA+AGG + chr2_2:3589268-3589287 None:intergenic 25.0%
! AAATTCACCTGAAAAATGAA+GGG + chr2_2:3589291-3589310 None:intergenic 25.0%
! AAAATTCACCTGAAAAATGA+AGG + chr2_2:3589292-3589311 None:intergenic 25.0%
! TGATTATTGGAACGAAAAAT+AGG + chr2_2:3589417-3589436 None:intergenic 25.0%
!!! TTTGTTTGTTTTGCTTTAAC+AGG - chr2_2:3589501-3589520 Msa0231370:intron 25.0%
!!! TTGTTTGTTTTGCTTTAACA+GGG - chr2_2:3589502-3589521 Msa0231370:intron 25.0%
!!! AAGTATATTTTTGAGCTCAT+TGG - chr2_2:3589551-3589570 Msa0231370:intron 25.0%
!!! AGTATATTTTTGAGCTCATT+GGG - chr2_2:3589552-3589571 Msa0231370:intron 25.0%
!!! TTTTTGAAGAACCTTGAATA+TGG - chr2_2:3590016-3590035 Msa0231370:intron 25.0%
! AATTGCATTTAATTAACCAG+GGG - chr2_2:3590157-3590176 Msa0231370:intron 25.0%
!! TATCTTTGATAGAGTATTTG+TGG - chr2_2:3590291-3590310 Msa0231370:intron 25.0%
! TTTGTTTGAAGAAATGCATA+TGG - chr2_2:3590330-3590349 Msa0231370:intron 25.0%
! GTGTATTTATGACTAAAATG+TGG - chr2_2:3590412-3590431 Msa0231370:intron 25.0%
! TATTTATGACTAAAATGTGG+TGG - chr2_2:3590415-3590434 Msa0231370:intron 25.0%
!! ATTTCTTTTAGTATGCCATT+TGG - chr2_2:3590574-3590593 Msa0231370:intron 25.0%
!! TATTACTTGCTAATTGTCAA+TGG - chr2_2:3590745-3590764 Msa0231370:CDS 25.0%
!! ATTACTTGCTAATTGTCAAT+GGG - chr2_2:3590746-3590765 Msa0231370:CDS 25.0%
! CATTATTTAGAGAACAAGAT+AGG - chr2_2:3590838-3590857 Msa0231370:intron 25.0%
!!! CAGACAATGATTATTTTATG+AGG - chr2_2:3591006-3591025 Msa0231370:intron 25.0%
!!! ATAGCTGTTTGGTTTTATAA+GGG - chr2_2:3591090-3591109 Msa0231370:CDS 25.0%
! AATCATTTGTATTATCTCAC+AGG - chr2_2:3591125-3591144 Msa0231370:CDS 25.0%
! TTAAGATGGAAATCATTAGT+TGG - chr2_2:3591428-3591447 Msa0231370:intron 25.0%
! AAGAAAGGAAATGGTTATAA+AGG + chr2_2:3591620-3591639 None:intergenic 25.0%
!! TTTTCCATTACCTAGTAAAT+AGG + chr2_2:3591751-3591770 None:intergenic 25.0%
! ATGTTCATATTATAAGGCTA+AGG + chr2_2:3591854-3591873 None:intergenic 25.0%
!!! ATGATTTTTTGACTAGTTGA+TGG - chr2_2:3591875-3591894 Msa0231370:intron 25.0%
! TTTCTGCTTCATAAGAAATA+AGG + chr2_2:3591970-3591989 None:intergenic 25.0%
!! ATCAGTATATGTTTTCTTGA+CGG - chr2_2:3592011-3592030 Msa0231370:intron 25.0%
!!! TTTCCTTAATTTTTTCCCAA+TGG - chr2_2:3592079-3592098 Msa0231370:intron 25.0%
!!! TTTTTTCTTTTAACCCAGAA+AGG - chr2_2:3592158-3592177 Msa0231370:intron 25.0%
! ACAAATAAGTACCATAAAAG+TGG + chr2_2:3592554-3592573 None:intergenic 25.0%
!! TTTATGGTACTTATTTGTTG+AGG - chr2_2:3592556-3592575 Msa0231370:intron 25.0%
!! TTATGGTACTTATTTGTTGA+GGG - chr2_2:3592557-3592576 Msa0231370:intron 25.0%
!! ATTGGAATTTGGATATTTTG+GGG - chr2_2:3592693-3592712 Msa0231370:intron 25.0%
! ATGATTCTTAAGAAAACCAA+TGG + chr2_2:3592937-3592956 None:intergenic 25.0%
! TCAATCTACATTTATCATTG+GGG - chr2_2:3592983-3593002 Msa0231370:intron 25.0%
! CAGAAGATAGGATTTATAAT+AGG - chr2_2:3593080-3593099 Msa0231370:intron 25.0%
! TATGGATAGTTCAATAGAAA+AGG - chr2_2:3593241-3593260 Msa0231370:intron 25.0%
! ATAGTTCAATAGAAAAGGTA+GGG - chr2_2:3593246-3593265 Msa0231370:intron 25.0%
!!! TGTTTTTCAGTTCAATTCTT+TGG - chr2_2:3593616-3593635 Msa0231370:intron 25.0%
! CATCTTAGTTGTAGTAAAAT+AGG + chr2_2:3593815-3593834 None:intergenic 25.0%
!! CTATTTTACTACAACTAAGA+TGG - chr2_2:3593813-3593832 Msa0231370:intron 25.0%
!!! TTGCAGTTTTAAACTAATCA+TGG + chr2_2:3593871-3593890 None:intergenic 25.0%
!! GTTATGTTTGATGATCAAAT+TGG - chr2_2:3593959-3593978 Msa0231370:intron 25.0%
!! ATAAAATGGTCATGCTTTTA+AGG + chr2_2:3594053-3594072 None:intergenic 25.0%
! GGTAAGTGTAAAAAGAAAAA+AGG - chr2_2:3594135-3594154 Msa0231370:intron 25.0%
! ACTTCAAAAAGAAAAAGAAG+CGG - chr2_2:3594485-3594504 Msa0231370:intron 25.0%
!! TCAAATTTTATTCCAAAAGC+AGG + chr2_2:3594634-3594653 None:intergenic 25.0%
! TTATGAAAAGCTCAAAAACT+CGG - chr2_2:3594858-3594877 Msa0231370:intron 25.0%
! TTAGTCTATGAAACATGATT+TGG - chr2_2:3594910-3594929 Msa0231370:intron 25.0%
! TAGTCTATGAAACATGATTT+GGG - chr2_2:3594911-3594930 Msa0231370:intron 25.0%
!! CATTAGATATGATTTTCTCA+TGG - chr2_2:3595457-3595476 Msa0231370:CDS 25.0%
! AGTTCAATTTCACAGTAAAT+AGG + chr2_2:3595521-3595540 None:intergenic 25.0%
!! GCATTTGATTTTTCTTGTCT+CGG + chr2_2:3584775-3584794 None:intergenic 30.0%
GACAAGAAAAATCAAATGCA+AGG - chr2_2:3584776-3584795 Msa0231370:three_prime_UTR 30.0%
AGAAAAATCAAATGCAAGGA+AGG - chr2_2:3584780-3584799 Msa0231370:three_prime_UTR 30.0%
GAAAAATCAAATGCAAGGAA+GGG - chr2_2:3584781-3584800 Msa0231370:three_prime_UTR 30.0%
!!! CATTTGGTTTTTTCTTGTCT+CGG + chr2_2:3584883-3584902 None:intergenic 30.0%
CTGGAAGTTATTTGATTGTT+TGG + chr2_2:3585110-3585129 None:intergenic 30.0%
ACTAGCCAAATGGAAATATA+TGG - chr2_2:3585159-3585178 Msa0231370:three_prime_UTR 30.0%
TATGGCCATATATTTCCATT+TGG + chr2_2:3585167-3585186 None:intergenic 30.0%
TGCTTTCTTCAAAATGGTTA+TGG + chr2_2:3585185-3585204 None:intergenic 30.0%
AGTTTATGGAAGAACTTTGT+TGG + chr2_2:3585259-3585278 None:intergenic 30.0%
ACAAAGTTCTTCCATAAACT+TGG - chr2_2:3585259-3585278 Msa0231370:intron 30.0%
TTGGGAATTATCCAAGTTTA+TGG + chr2_2:3585273-3585292 None:intergenic 30.0%
ATGTACATTGCATGTGAATT+TGG + chr2_2:3585454-3585473 None:intergenic 30.0%
ATACACATTTGTCTTAGCTT+TGG + chr2_2:3585481-3585500 None:intergenic 30.0%
TGGCAATAACAAAGAAAACT+AGG - chr2_2:3585536-3585555 Msa0231370:intron 30.0%
! TGTCAATCTATTTTCCATTG+AGG - chr2_2:3585735-3585754 Msa0231370:intron 30.0%
CAATTTGTCATCAGAATTTC+TGG - chr2_2:3585783-3585802 Msa0231370:intron 30.0%
CTGATTCAATTTGACAATTG+AGG + chr2_2:3585888-3585907 None:intergenic 30.0%
TACTCTTAATCCCAAATTCT+AGG + chr2_2:3585947-3585966 None:intergenic 30.0%
!!! TTTCTCTCTGTTAGTTTTTC+TGG + chr2_2:3586123-3586142 None:intergenic 30.0%
!! TTTCCCTAATTTCTAAGGTT+CGG + chr2_2:3586154-3586173 None:intergenic 30.0%
CGAGAAAGAAAAGAAAATGA+AGG - chr2_2:3586357-3586376 Msa0231370:three_prime_UTR 30.0%
TGATACCATGTTAGTAAACA+TGG - chr2_2:3586478-3586497 Msa0231370:three_prime_UTR 30.0%
CTACTATTAGAGATACTAGT+TGG + chr2_2:3586621-3586640 None:intergenic 30.0%
! TGACTCCAAAGTGTTAAATT+TGG + chr2_2:3586668-3586687 None:intergenic 30.0%
ACATGATAAGCTAAGACTTT+GGG + chr2_2:3587591-3587610 None:intergenic 30.0%
TACATGATAAGCTAAGACTT+TGG + chr2_2:3587592-3587611 None:intergenic 30.0%
!!! ATGTTTTTTATCACGTACCT+GGG - chr2_2:3588227-3588246 Msa0231370:three_prime_UTR 30.0%
ATTATTGAGAAGAACTCGTT+TGG + chr2_2:3588345-3588364 None:intergenic 30.0%
AGAAAAATGTTATAGGGTGA+GGG + chr2_2:3588391-3588410 None:intergenic 30.0%
TCTGGGAGAAAAATGTTATA+GGG + chr2_2:3588397-3588416 None:intergenic 30.0%
ATCTGGGAGAAAAATGTTAT+AGG + chr2_2:3588398-3588417 None:intergenic 30.0%
AACTATAAGAAACACGATCT+GGG + chr2_2:3588414-3588433 None:intergenic 30.0%
TAACTATAAGAAACACGATC+TGG + chr2_2:3588415-3588434 None:intergenic 30.0%
CGTGTTTCTTATAGTTAAAG+AGG - chr2_2:3588418-3588437 Msa0231370:three_prime_UTR 30.0%
GTTTCTTATAGTTAAAGAGG+AGG - chr2_2:3588421-3588440 Msa0231370:three_prime_UTR 30.0%
! AATGACATTTTTGCCCTTAA+TGG + chr2_2:3588501-3588520 None:intergenic 30.0%
!! ATTACGTATTTTTGATGAGG+TGG + chr2_2:3588567-3588586 None:intergenic 30.0%
GGAAAGATTAATAACTTCAG+GGG - chr2_2:3588630-3588649 Msa0231370:three_prime_UTR 30.0%
TTCAAATGACCTATATTTGC+AGG - chr2_2:3588659-3588678 Msa0231370:three_prime_UTR 30.0%
TCAAATGACCTATATTTGCA+GGG - chr2_2:3588660-3588679 Msa0231370:three_prime_UTR 30.0%
! TATTTTGTCCCTGCAAATAT+AGG + chr2_2:3588671-3588690 None:intergenic 30.0%
TGACTACTATAACTTATGGA+TGG - chr2_2:3588884-3588903 Msa0231370:three_prime_UTR 30.0%
TGTTATAAGTACTTTGTGGA+CGG + chr2_2:3588989-3589008 None:intergenic 30.0%
! ACGTAGCTTCACATTTTTAT+TGG - chr2_2:3589042-3589061 Msa0231370:CDS 30.0%
! TTCCCCAATTTTCATTTTCT+AGG - chr2_2:3589153-3589172 Msa0231370:CDS 30.0%
! TCCCCAATTTTCATTTTCTA+GGG - chr2_2:3589154-3589173 Msa0231370:CDS 30.0%
ACCCTAGAAAATGAAAATTG+GGG + chr2_2:3589158-3589177 None:intergenic 30.0%
!! GTATATTTTTGAGCTCATTG+GGG - chr2_2:3589553-3589572 Msa0231370:intron 30.0%
ACTATTGAGGTAGAATGATT+TGG - chr2_2:3589759-3589778 Msa0231370:intron 30.0%
CTATTGAGGTAGAATGATTT+GGG - chr2_2:3589760-3589779 Msa0231370:intron 30.0%
AGAAATTCCAGAAAAAAGAG+AGG - chr2_2:3590267-3590286 Msa0231370:intron 30.0%
!!! AAGATATCCTCTCTTTTTTC+TGG + chr2_2:3590277-3590296 None:intergenic 30.0%
! TTTTGACGAGGACATAAAAT+TGG - chr2_2:3590355-3590374 Msa0231370:intron 30.0%
TTTGACGAGGACATAAAATT+GGG - chr2_2:3590356-3590375 Msa0231370:intron 30.0%
! ATAAATACACAATAGCTCTG+TGG + chr2_2:3590402-3590421 None:intergenic 30.0%
TAACCAGCATTATCAATCAT+GGG + chr2_2:3590453-3590472 None:intergenic 30.0%
ATAACCAGCATTATCAATCA+TGG + chr2_2:3590454-3590473 None:intergenic 30.0%
!! ATTTGTTGTACTTGTTCGAT+TGG - chr2_2:3590533-3590552 Msa0231370:intron 30.0%
! TTTAGTATGCCATTTGGAAT+TGG - chr2_2:3590580-3590599 Msa0231370:intron 30.0%
TCATTAATGAGTTTCAACCT+CGG + chr2_2:3590805-3590824 None:intergenic 30.0%
CTTCTTCATGTGATAAAAGA+TGG - chr2_2:3590981-3591000 Msa0231370:intron 30.0%
TTTCGTATTAACATGCTAGA+TGG - chr2_2:3591042-3591061 Msa0231370:CDS 30.0%
ATTCACTTAAGATAGCTGTT+TGG - chr2_2:3591079-3591098 Msa0231370:CDS 30.0%
!!! GATAGCTGTTTGGTTTTATA+AGG - chr2_2:3591089-3591108 Msa0231370:CDS 30.0%
AAACTGCTATTGAGAAACAA+AGG - chr2_2:3591320-3591339 Msa0231370:intron 30.0%
!! AAATCATTAGTTGGCTCTTT+TGG - chr2_2:3591437-3591456 Msa0231370:intron 30.0%
TCATAACTTCTATGCACAAA+AGG - chr2_2:3591537-3591556 Msa0231370:intron 30.0%
TGATTCAAGACCTATTTACT+AGG - chr2_2:3591738-3591757 Msa0231370:intron 30.0%
AAGACCTATTTACTAGGTAA+TGG - chr2_2:3591744-3591763 Msa0231370:intron 30.0%
TCTTATCATCCATAGACTAA+GGG - chr2_2:3591787-3591806 Msa0231370:intron 30.0%
TCATATTATAAGGCTAAGGA+TGG + chr2_2:3591850-3591869 None:intergenic 30.0%
!! TCTTTTTGTTTAAGCCAACA+AGG + chr2_2:3591901-3591920 None:intergenic 30.0%
ACATATACTGATATCCACAA+AGG + chr2_2:3592003-3592022 None:intergenic 30.0%
! TCAGTATATGTTTTCTTGAC+GGG - chr2_2:3592012-3592031 Msa0231370:intron 30.0%
AGACCATTGGGAAAAAATTA+AGG + chr2_2:3592085-3592104 None:intergenic 30.0%
!!! GTCTATGTTTTGGTTGTTTT+TGG - chr2_2:3592101-3592120 Msa0231370:intron 30.0%
!!! TATGTTTTGGTTGTTTTTGG+AGG - chr2_2:3592104-3592123 Msa0231370:intron 30.0%
AAAAATCCAAACGAAAAGCA+GGG + chr2_2:3592143-3592162 None:intergenic 30.0%
AAAAAATCCAAACGAAAAGC+AGG + chr2_2:3592144-3592163 None:intergenic 30.0%
ATTATACACGTCCTTAATTC+TGG - chr2_2:3592214-3592233 Msa0231370:intron 30.0%
CAAGTCGTGAAGAAAAAAAA+TGG + chr2_2:3592521-3592540 None:intergenic 30.0%
TACCATAAAAGTGGTGATAT+GGG + chr2_2:3592545-3592564 None:intergenic 30.0%
ACAACACTCTAATTGGAATT+TGG - chr2_2:3592682-3592701 Msa0231370:intron 30.0%
TTAAAAGTTAGCAGTCAAAG+GGG + chr2_2:3592782-3592801 None:intergenic 30.0%
CTTAAAAGTTAGCAGTCAAA+GGG + chr2_2:3592783-3592802 None:intergenic 30.0%
! CTTTGACTGCTAACTTTTAA+GGG - chr2_2:3592782-3592801 Msa0231370:intron 30.0%
ATTTCCATCAATTTACTTGC+TGG - chr2_2:3592865-3592884 Msa0231370:intron 30.0%
GATCAGTATAATGAAGACTA+GGG + chr2_2:3592894-3592913 None:intergenic 30.0%
TGATCAGTATAATGAAGACT+AGG + chr2_2:3592895-3592914 None:intergenic 30.0%
AATGAATGGTTACAGAAGAT+AGG - chr2_2:3593068-3593087 Msa0231370:intron 30.0%
TATCGTTAGAGAGAATACTT+GGG - chr2_2:3593108-3593127 Msa0231370:intron 30.0%
GATAGTTCAATAGAAAAGGT+AGG - chr2_2:3593245-3593264 Msa0231370:intron 30.0%
! TATTAGATGATAGGGTGTTA+TGG - chr2_2:3593307-3593326 Msa0231370:intron 30.0%
TATATGGGGATAAGTTGTTT+AGG - chr2_2:3593481-3593500 Msa0231370:intron 30.0%
!!! GACTGGATTGTTTTTATGTT+TGG - chr2_2:3593590-3593609 Msa0231370:intron 30.0%
!! CTGAAACATGGTTTTTCAAT+TGG - chr2_2:3593751-3593770 Msa0231370:intron 30.0%
! AGTTAAGTGATTAAAGCATC+AGG + chr2_2:3593777-3593796 None:intergenic 30.0%
! TACTTTAATTTCTTCTCCAC+AGG - chr2_2:3593896-3593915 Msa0231370:intron 30.0%
CCAAACAAATGTTTCAAAAC+TGG + chr2_2:3594008-3594027 None:intergenic 30.0%
!!! CCAGTTTTGAAACATTTGTT+TGG - chr2_2:3594005-3594024 Msa0231370:intron 30.0%
TTGAAACATTTGTTTGGATC+AGG - chr2_2:3594011-3594030 Msa0231370:intron 30.0%
AAAAAAGGGGAGAATGTAAA+GGG - chr2_2:3594150-3594169 Msa0231370:intron 30.0%
GCCAATGATAAAGAATATTG+AGG - chr2_2:3594222-3594241 Msa0231370:intron 30.0%
GCCTCAATATTCTTTATCAT+TGG + chr2_2:3594226-3594245 None:intergenic 30.0%
ATATTGAGGCTACTTATATG+TGG - chr2_2:3594236-3594255 Msa0231370:intron 30.0%
CAAAATGTTAAGCAGGAAAA+TGG + chr2_2:3594281-3594300 None:intergenic 30.0%
AAGCATACAAAATGTTAAGC+AGG + chr2_2:3594288-3594307 None:intergenic 30.0%
! AACATTTTGTATGCTTTCAC+AGG - chr2_2:3594292-3594311 Msa0231370:intron 30.0%
TCTTATTGATGCTAAACAGA+AGG - chr2_2:3594509-3594528 Msa0231370:intron 30.0%
AGAGTGTGATATTCATATGT+TGG + chr2_2:3594589-3594608 None:intergenic 30.0%
!! TTGTTGATTTGATATGATGG+TGG - chr2_2:3594695-3594714 Msa0231370:intron 30.0%
AAAATATTAAAGCCCTCAAC+TGG + chr2_2:3594789-3594808 None:intergenic 30.0%
AGTCTATGAAACATGATTTG+GGG - chr2_2:3594912-3594931 Msa0231370:intron 30.0%
! TATTTATGTTGTTGTTCTGC+AGG - chr2_2:3595033-3595052 Msa0231370:intron 30.0%
AAGAGAAAGAAGATCTTGAA+AGG - chr2_2:3595068-3595087 Msa0231370:intron 30.0%
CTAGACAAATACTTGCATAA+CGG + chr2_2:3595325-3595344 None:intergenic 30.0%
ACTGTGAAATTGAACTTTCT+TGG - chr2_2:3595525-3595544 Msa0231370:CDS 30.0%
!!! CACTTTTATCTTTGGAACCT+TGG + chr2_2:3584842-3584861 None:intergenic 35.0%
ACATGGTTATGCATCTCTAT+TGG + chr2_2:3584910-3584929 None:intergenic 35.0%
!!! CAACATGGCTTTGTTTTCTA+TGG + chr2_2:3584947-3584966 None:intergenic 35.0%
ATGGTTTGAATGCATCAACA+TGG + chr2_2:3584962-3584981 None:intergenic 35.0%
TGTTGATGCATTCAAACCAT+AGG - chr2_2:3584962-3584981 Msa0231370:three_prime_UTR 35.0%
ACCAACATGTTGAAAACCAA+TGG - chr2_2:3585040-3585059 Msa0231370:three_prime_UTR 35.0%
!!! TGCTATTTTGTTGAAGCCAT+TGG + chr2_2:3585059-3585078 None:intergenic 35.0%
CAAACAAGTTTGTGCACATA+AGG - chr2_2:3585077-3585096 Msa0231370:three_prime_UTR 35.0%
CACAAGTGCTTTCTTCAAAA+TGG + chr2_2:3585191-3585210 None:intergenic 35.0%
! TGTGAAGCATATGTTTGTTG+TGG + chr2_2:3585224-3585243 None:intergenic 35.0%
TATCCAAGAGTTCATCAACA+AGG - chr2_2:3585498-3585517 Msa0231370:intron 35.0%
! TATCCTTGTTGATGAACTCT+TGG + chr2_2:3585504-3585523 None:intergenic 35.0%
ACCACAATGAAGCAAGATAT+CGG - chr2_2:3585565-3585584 Msa0231370:intron 35.0%
! TGTTTGTTGAATGTCCTCAA+TGG + chr2_2:3585752-3585771 None:intergenic 35.0%
AAAATAGAGTAGAGATCGCA+AGG - chr2_2:3586002-3586021 Msa0231370:three_prime_UTR 35.0%
ATCACCGAACCTTAGAAATT+AGG - chr2_2:3586147-3586166 Msa0231370:three_prime_UTR 35.0%
TCACCGAACCTTAGAAATTA+GGG - chr2_2:3586148-3586167 Msa0231370:three_prime_UTR 35.0%
ACCTTAGAAATTAGGGAAAG+AGG - chr2_2:3586155-3586174 Msa0231370:three_prime_UTR 35.0%
ACCTCTTTCCCTAATTTCTA+AGG + chr2_2:3586159-3586178 None:intergenic 35.0%
ATCAAAACGCAATCACAAAC+TGG - chr2_2:3586199-3586218 Msa0231370:three_prime_UTR 35.0%
! ATTTTCTCGAGAAAATGCAG+CGG - chr2_2:3586421-3586440 Msa0231370:three_prime_UTR 35.0%
AAACTTGGTATCCACCTTAA+AGG + chr2_2:3586454-3586473 None:intergenic 35.0%
TGATGAAGATATCCCACTAA+TGG - chr2_2:3586569-3586588 Msa0231370:three_prime_UTR 35.0%
GATGAAGATATCCCACTAAT+GGG - chr2_2:3586570-3586589 Msa0231370:three_prime_UTR 35.0%
ATGAAGATATCCCACTAATG+GGG - chr2_2:3586571-3586590 Msa0231370:three_prime_UTR 35.0%
CTTGTAATAACCCCATTAGT+GGG + chr2_2:3586584-3586603 None:intergenic 35.0%
ACTTGTAATAACCCCATTAG+TGG + chr2_2:3586585-3586604 None:intergenic 35.0%
!! TTAGAGATACTAGTTGGTAG+TGG + chr2_2:3586615-3586634 None:intergenic 35.0%
!!! CATGTTTTTTATCACGTACC+TGG - chr2_2:3588226-3588245 Msa0231370:three_prime_UTR 35.0%
! TTGGTGTTTGGAATCTCTAT+TGG + chr2_2:3588302-3588321 None:intergenic 35.0%
! TTCCAAACACCAATTTTCAG+AGG - chr2_2:3588309-3588328 Msa0231370:three_prime_UTR 35.0%
GAGAAAAATGTTATAGGGTG+AGG + chr2_2:3588392-3588411 None:intergenic 35.0%
AAGATGAAAAGATGGAGACA+TGG - chr2_2:3588445-3588464 Msa0231370:three_prime_UTR 35.0%
AGATGAAAAGATGGAGACAT+GGG - chr2_2:3588446-3588465 Msa0231370:three_prime_UTR 35.0%
!! ATTTTTGCCCTTAATGGATC+AGG + chr2_2:3588495-3588514 None:intergenic 35.0%
CCATAAGTTATAGTAGTCAG+AGG + chr2_2:3588883-3588902 None:intergenic 35.0%
CCTCTGACTACTATAACTTA+TGG - chr2_2:3588880-3588899 Msa0231370:three_prime_UTR 35.0%
! AAAGTACTTACTTGATGTCG+AGG + chr2_2:3588940-3588959 None:intergenic 35.0%
CTACGTATTGTATGGAGTAT+AGG + chr2_2:3589028-3589047 None:intergenic 35.0%
ATGTGAAGCTACGTATTGTA+TGG + chr2_2:3589036-3589055 None:intergenic 35.0%
AGAAGAAAAACGAACGAAGA+AGG + chr2_2:3589132-3589151 None:intergenic 35.0%
! GATGAAAGTATGGAGGAATT+GGG + chr2_2:3589198-3589217 None:intergenic 35.0%
! AGATGAAAGTATGGAGGAAT+TGG + chr2_2:3589199-3589218 None:intergenic 35.0%
! TTATCGAGATGAAAGTATGG+AGG + chr2_2:3589205-3589224 None:intergenic 35.0%
TGGTTATCGAGATGAAAGTA+TGG + chr2_2:3589208-3589227 None:intergenic 35.0%
TGAAGGGAAACTTGAAATAG+AGG + chr2_2:3589275-3589294 None:intergenic 35.0%
!! CAAGTTTCCCTTCATTTTTC+AGG - chr2_2:3589281-3589300 Msa0231370:intron 35.0%
GATATACGAAACTCTCGTAA+CGG - chr2_2:3589352-3589371 Msa0231370:intron 35.0%
TATCTATAACGCGTATGTGT+CGG - chr2_2:3589811-3589830 Msa0231370:intron 35.0%
!! CTTTCAGGTTTGATGTTCTA+TGG - chr2_2:3590092-3590111 Msa0231370:intron 35.0%
GATGTTCTATGGACATAACA+TGG - chr2_2:3590103-3590122 Msa0231370:intron 35.0%
AACCAGCATTATCAATCATG+GGG + chr2_2:3590452-3590471 None:intergenic 35.0%
! ATGGGTTTCTTTCTTTTGTG+TGG - chr2_2:3590764-3590783 Msa0231370:CDS 35.0%
ATCAGTTTCTTCCCATAACA+TGG - chr2_2:3590890-3590909 Msa0231370:intron 35.0%
TTCCCATAACATGGAAAATG+AGG - chr2_2:3590899-3590918 Msa0231370:intron 35.0%
TCCCATAACATGGAAAATGA+GGG - chr2_2:3590900-3590919 Msa0231370:intron 35.0%
! TCCCTCATTTTCCATGTTAT+GGG + chr2_2:3590904-3590923 None:intergenic 35.0%
! ATCCCTCATTTTCCATGTTA+TGG + chr2_2:3590905-3590924 None:intergenic 35.0%
GTATTAACATGCTAGATGGT+GGG - chr2_2:3591046-3591065 Msa0231370:CDS 35.0%
GATACAGAAGACAAAGAAGT+AGG - chr2_2:3591236-3591255 Msa0231370:intron 35.0%
GGAAAGAAGAAGAGAAGAAA+AGG - chr2_2:3591341-3591360 Msa0231370:intron 35.0%
! GCACAAAAGGTGTATATCAT+TGG - chr2_2:3591550-3591569 Msa0231370:intron 35.0%
! AGACTGGCTGAAAATTAAGA+AGG - chr2_2:3591581-3591600 Msa0231370:intron 35.0%
CTCTTATCATCCATAGACTA+AGG - chr2_2:3591786-3591805 Msa0231370:intron 35.0%
CTGCTTCATAAGAAATAAGG+TGG + chr2_2:3591967-3591986 None:intergenic 35.0%
! CAGTATATGTTTTCTTGACG+GGG - chr2_2:3592013-3592032 Msa0231370:intron 35.0%
TTTCTCGTATGAATTTGCAG+AGG - chr2_2:3592036-3592055 Msa0231370:intron 35.0%
TTCTCGTATGAATTTGCAGA+GGG - chr2_2:3592037-3592056 Msa0231370:intron 35.0%
! TTTCCCAATGGTCTATGTTT+TGG - chr2_2:3592091-3592110 Msa0231370:intron 35.0%
CAACCAAAACATAGACCATT+GGG + chr2_2:3592097-3592116 None:intergenic 35.0%
ACAACCAAAACATAGACCAT+TGG + chr2_2:3592098-3592117 None:intergenic 35.0%
AAAATCCAAACGAAAAGCAG+GGG + chr2_2:3592142-3592161 None:intergenic 35.0%
! GATGCAATGTTTTCCTTTCT+GGG + chr2_2:3592174-3592193 None:intergenic 35.0%
! AGATGCAATGTTTTCCTTTC+TGG + chr2_2:3592175-3592194 None:intergenic 35.0%
GACAAATATTATGTGGCTGT+TGG + chr2_2:3592340-3592359 None:intergenic 35.0%
TCTTCATCATTTGTGTGAGA+TGG - chr2_2:3592406-3592425 Msa0231370:intron 35.0%
TCATTTGTGTGAGATGGAAA+AGG - chr2_2:3592412-3592431 Msa0231370:intron 35.0%
GTACCATAAAAGTGGTGATA+TGG + chr2_2:3592546-3592565 None:intergenic 35.0%
GATCTTCACAACACTCTAAT+TGG - chr2_2:3592675-3592694 Msa0231370:intron 35.0%
ATTGAGTAGTATGAGATGCT+CGG - chr2_2:3592730-3592749 Msa0231370:intron 35.0%
CCTTAAAAGTTAGCAGTCAA+AGG + chr2_2:3592784-3592803 None:intergenic 35.0%
! CCTTTGACTGCTAACTTTTA+AGG - chr2_2:3592781-3592800 Msa0231370:intron 35.0%
GATAAGTATCTAAGTACTCG+AGG + chr2_2:3592814-3592833 None:intergenic 35.0%
CAAGTATTCTCTCTAACGAT+AGG + chr2_2:3593109-3593128 None:intergenic 35.0%
CTATCGTTAGAGAGAATACT+TGG - chr2_2:3593107-3593126 Msa0231370:intron 35.0%
GACAATGACAATGTTGCTAA+AGG + chr2_2:3593205-3593224 None:intergenic 35.0%
TAGCAACATTGTCATTGTCA+AGG - chr2_2:3593206-3593225 Msa0231370:intron 35.0%
TCTATTGAACTATCCATAGC+TGG + chr2_2:3593239-3593258 None:intergenic 35.0%
GTTCAATTCTTTGGATGCAA+TGG - chr2_2:3593625-3593644 Msa0231370:intron 35.0%
!! GTGACAAAGGCACTATAAAA+TGG + chr2_2:3594067-3594086 None:intergenic 35.0%
! GGTTTTCTGTTACGTAGTTT+AGG - chr2_2:3594114-3594133 Msa0231370:intron 35.0%
GAAAAAAGGGGAGAATGTAA+AGG - chr2_2:3594149-3594168 Msa0231370:intron 35.0%
AAAAAGGGGAGAATGTAAAG+GGG - chr2_2:3594151-3594170 Msa0231370:intron 35.0%
AGGGGATTAAAAATTGAAGC+AGG - chr2_2:3594169-3594188 Msa0231370:intron 35.0%
TATTGATGCTAAACAGAAGG+AGG - chr2_2:3594512-3594531 Msa0231370:intron 35.0%
! ACAGAAGGAGGTATGTATTT+CGG - chr2_2:3594524-3594543 Msa0231370:intron 35.0%
CTCTGATTATTTCCTTTCTC+TGG - chr2_2:3594558-3594577 Msa0231370:intron 35.0%
! TTTTATTCCAAAAGCAGGAC+TGG + chr2_2:3594629-3594648 None:intergenic 35.0%
!!! TATGATGGTGGAGTTTTGAT+AGG - chr2_2:3594707-3594726 Msa0231370:intron 35.0%
AAAGACTGAAGCATGTTCAT+CGG + chr2_2:3594827-3594846 None:intergenic 35.0%
AGGAACAAGCGTAAAATCAT+CGG - chr2_2:3594987-3595006 Msa0231370:intron 35.0%
AGATTGAAGAATCTCAGAGA+AGG - chr2_2:3595113-3595132 Msa0231370:intron 35.0%
GATTGAAGAATCTCAGAGAA+GGG - chr2_2:3595114-3595133 Msa0231370:intron 35.0%
! AGCAAATGACAATTTTGGAC+GGG + chr2_2:3595287-3595306 None:intergenic 35.0%
! GAGCAAATGACAATTTTGGA+CGG + chr2_2:3595288-3595307 None:intergenic 35.0%
! CCAAAATTGTCATTTGCTCT+CGG - chr2_2:3595289-3595308 Msa0231370:CDS 35.0%
AGAAAATTAAACAGCCTCCT+TGG - chr2_2:3595394-3595413 Msa0231370:CDS 35.0%
CTCATGTAGCGAAAATTAAG+TGG + chr2_2:3595483-3595502 None:intergenic 35.0%
! TGATTTTTCTTGTCTCGGCT+CGG + chr2_2:3584770-3584789 None:intergenic 40.0%
!!! GAGGGCATCACTTTTATCTT+TGG + chr2_2:3584850-3584869 None:intergenic 40.0%
!! CATCTCTATTGGCTTGCATT+TGG + chr2_2:3584899-3584918 None:intergenic 40.0%
TGGTTTGAAGACACATCACA+TGG + chr2_2:3584927-3584946 None:intergenic 40.0%
!! ATTGCTTGGAAGCATTGGTT+TGG + chr2_2:3584988-3585007 None:intergenic 40.0%
!!! GCCATTGGTTTTCAACATGT+TGG + chr2_2:3585044-3585063 None:intergenic 40.0%
AGCAGTTTCAACTAGCCAAA+TGG - chr2_2:3585149-3585168 Msa0231370:three_prime_UTR 40.0%
TTGTGAAGCATGTCTGTGTT+GGG + chr2_2:3585291-3585310 None:intergenic 40.0%
TTTGTGAAGCATGTCTGTGT+TGG + chr2_2:3585292-3585311 None:intergenic 40.0%
TTGCAGCCTCTAATTCTCTT+TGG + chr2_2:3585373-3585392 None:intergenic 40.0%
TGCATGTGAATTTGGTCACA+TGG + chr2_2:3585446-3585465 None:intergenic 40.0%
CAAGGATATAAGCAGCTTCT+TGG - chr2_2:3585516-3585535 Msa0231370:intron 40.0%
TCCGATATCTTGCTTCATTG+TGG + chr2_2:3585569-3585588 None:intergenic 40.0%
GAACCAACAAGTACCAACAA+AGG - chr2_2:3585616-3585635 Msa0231370:intron 40.0%
TCACCTTTGTTGGTACTTGT+TGG + chr2_2:3585622-3585641 None:intergenic 40.0%
TGACCTCATCAACATACGAA+AGG - chr2_2:3585639-3585658 Msa0231370:intron 40.0%
TCACCTTTCGTATGTTGATG+AGG + chr2_2:3585645-3585664 None:intergenic 40.0%
AGGACATTCAACAAACACCT+TGG - chr2_2:3585755-3585774 Msa0231370:intron 40.0%
GATGACAAATTGTGCTTCCA+AGG + chr2_2:3585775-3585794 None:intergenic 40.0%
! TTGTCATCAGAATTTCTGGG+AGG - chr2_2:3585787-3585806 Msa0231370:three_prime_UTR 40.0%
GGAGGAACAACACAAATGAA+AGG - chr2_2:3585805-3585824 Msa0231370:three_prime_UTR 40.0%
GCAGCGGAAAATATCCTTTA+AGG - chr2_2:3586437-3586456 Msa0231370:three_prime_UTR 40.0%
! GCGGAAAATATCCTTTAAGG+TGG - chr2_2:3586440-3586459 Msa0231370:three_prime_UTR 40.0%
ACATGGTATCAGAGCAAACT+TGG + chr2_2:3586469-3586488 None:intergenic 40.0%
GGATGCCATGTTTACTAACA+TGG + chr2_2:3586486-3586505 None:intergenic 40.0%
GTTAGTAAACATGGCATCCA+TGG - chr2_2:3586487-3586506 Msa0231370:three_prime_UTR 40.0%
! GTTTTCTCTCTATCCTTCCA+TGG + chr2_2:3586507-3586526 None:intergenic 40.0%
TCAGGTCAGACGACATAATT+AGG - chr2_2:3587627-3587646 Msa0231370:three_prime_UTR 40.0%
CAGGTCAGACGACATAATTA+GGG - chr2_2:3587628-3587647 Msa0231370:three_prime_UTR 40.0%
! TTGTGTGTGTGAGTTTTCCA+TGG - chr2_2:3587672-3587691 Msa0231370:three_prime_UTR 40.0%
ATCTCTTTCTTAGCCTCGAT+AGG + chr2_2:3587940-3587959 None:intergenic 40.0%
CACTAAATCGAACTCGTTTC+TGG + chr2_2:3588270-3588289 None:intergenic 40.0%
! TGCCTCTGAAAATTGGTGTT+TGG + chr2_2:3588314-3588333 None:intergenic 40.0%
! ACTCGATTGCCTCTGAAAAT+TGG + chr2_2:3588321-3588340 None:intergenic 40.0%
TGAGGGTTGAAACACGATTT+GGG + chr2_2:3588374-3588393 None:intergenic 40.0%
GTGGATGGTAATTAGCAATG+TGG + chr2_2:3588548-3588567 None:intergenic 40.0%
!! CGTATTTTTGATGAGGTGGA+TGG + chr2_2:3588563-3588582 None:intergenic 40.0%
!! TTTTTGAGCTCATTGGGGAT+CGG - chr2_2:3589558-3589577 Msa0231370:intron 40.0%
CTGCTATATCTATGTCCAAC+CGG + chr2_2:3589655-3589674 None:intergenic 40.0%
TTGGACATAGATATAGCAGG+AGG - chr2_2:3589656-3589675 Msa0231370:intron 40.0%
TGCTATACGAATATGGAGAC+CGG + chr2_2:3589699-3589718 None:intergenic 40.0%
CAGCAAATGCAACAGTGATA+TGG + chr2_2:3589892-3589911 None:intergenic 40.0%
!! ATGCATATGGCATTTTGACG+AGG - chr2_2:3590343-3590362 Msa0231370:intron 40.0%
!! AACCCCATGATTGATAATGC+TGG - chr2_2:3590447-3590466 Msa0231370:intron 40.0%
CTTGTTCGATTGGATACGAA+TGG - chr2_2:3590543-3590562 Msa0231370:intron 40.0%
TTCGATTGGATACGAATGGA+CGG - chr2_2:3590547-3590566 Msa0231370:intron 40.0%
AGAAGAGGTCCAATTCCAAA+TGG + chr2_2:3590592-3590611 None:intergenic 40.0%
GGAAAATGAGGGATATGAAC+AGG - chr2_2:3590911-3590930 Msa0231370:intron 40.0%
AAATGAGGGATATGAACAGG+TGG - chr2_2:3590914-3590933 Msa0231370:intron 40.0%
CGTATTAACATGCTAGATGG+TGG - chr2_2:3591045-3591064 Msa0231370:CDS 40.0%
AGTCGTTCTATTTCACCAAG+AGG - chr2_2:3591154-3591173 Msa0231370:intron 40.0%
TAGTTGTAGAAGGACTTCTG+CGG + chr2_2:3591180-3591199 None:intergenic 40.0%
GAAGTCCTTCTACAACTACT+TGG - chr2_2:3591182-3591201 Msa0231370:intron 40.0%
! CTTCTGTATCGTTTTGCAGT+TGG + chr2_2:3591226-3591245 None:intergenic 40.0%
TTTATGAGCAGGAGACAATG+AGG + chr2_2:3591266-3591285 None:intergenic 40.0%
GAACTGGAAGATTTATGAGC+AGG + chr2_2:3591277-3591296 None:intergenic 40.0%
AAATCTTCCAGTTCAAGCCT+CGG - chr2_2:3591283-3591302 Msa0231370:intron 40.0%
ATCATTGGTAAGACACAGAC+TGG - chr2_2:3591565-3591584 Msa0231370:intron 40.0%
ATACAAATCAGTAGATGCCC+TGG + chr2_2:3591683-3591702 None:intergenic 40.0%
GGATGATAAGAGCAAAAGCA+GGG + chr2_2:3591778-3591797 None:intergenic 40.0%
TGGATGATAAGAGCAAAAGC+AGG + chr2_2:3591779-3591798 None:intergenic 40.0%
TTATAAGGCTAAGGATGGAG+TGG + chr2_2:3591845-3591864 None:intergenic 40.0%
GAAAATACCTGTCTCCTTTG+TGG - chr2_2:3591986-3592005 Msa0231370:intron 40.0%
TCTCGTATGAATTTGCAGAG+GGG - chr2_2:3592038-3592057 Msa0231370:intron 40.0%
ATAATTACTGCCTGCAAGGA+TGG + chr2_2:3592248-3592267 None:intergenic 40.0%
TGTGATAATTACTGCCTGCA+AGG + chr2_2:3592252-3592271 None:intergenic 40.0%
GGGACTCGACAAATATTATG+TGG + chr2_2:3592347-3592366 None:intergenic 40.0%
ATGAAACCCACACAGTTTCA+GGG + chr2_2:3592367-3592386 None:intergenic 40.0%
! AAGAATCGCTCTGAACAATC+AGG + chr2_2:3592390-3592409 None:intergenic 40.0%
!! GTCCCATATCACCACTTTTA+TGG - chr2_2:3592540-3592559 Msa0231370:intron 40.0%
! ACTTATTTGTTGAGGGCTTG+AGG - chr2_2:3592564-3592583 Msa0231370:intron 40.0%
GCATCTCATACTACTCAATG+TGG + chr2_2:3592729-3592748 None:intergenic 40.0%
!! TGACTGCTAACTTTTAAGGG+AGG - chr2_2:3592785-3592804 Msa0231370:intron 40.0%
GCATCCAGCAAGTAAATTGA+TGG + chr2_2:3592872-3592891 None:intergenic 40.0%
!! CTGCTTACTTCTAGTTCCAT+TGG - chr2_2:3592918-3592937 Msa0231370:intron 40.0%
! GATGACAGTCTTGTCTTGTA+TGG - chr2_2:3593158-3593177 Msa0231370:intron 40.0%
CAACATTGTCATTGTCAAGG+AGG - chr2_2:3593209-3593228 Msa0231370:intron 40.0%
TGTCGGCATATAGTGTTTCT+TGG + chr2_2:3593276-3593295 None:intergenic 40.0%
! TAGATGATAGGGTGTTATGG+CGG - chr2_2:3593310-3593329 Msa0231370:intron 40.0%
! CAAATTTTTCCCCGCTAGAT+GGG + chr2_2:3593361-3593380 None:intergenic 40.0%
CGGGGAAAAATTTGGATCTT+GGG - chr2_2:3593367-3593386 Msa0231370:intron 40.0%
GGAAAAATTTGGATCTTGGG+TGG - chr2_2:3593370-3593389 Msa0231370:intron 40.0%
AAACAATCCAGTCTGTAAGC+CGG + chr2_2:3593583-3593602 None:intergenic 40.0%
ATTACATTGGGGCTGAAACA+TGG - chr2_2:3593739-3593758 Msa0231370:intron 40.0%
TTTGGATCAGGATTCGATAG+AGG - chr2_2:3594023-3594042 Msa0231370:intron 40.0%
TTATAGTGCCTTTGTCACCA+TGG - chr2_2:3594069-3594088 Msa0231370:intron 40.0%
!! GGTTAGTTTGTCGTTGATTG+TGG - chr2_2:3594093-3594112 Msa0231370:intron 40.0%
TTGGCATCTCACATAGAAAC+TGG + chr2_2:3594207-3594226 None:intergenic 40.0%
GAAAATGGCTACACAAACAG+GGG + chr2_2:3594266-3594285 None:intergenic 40.0%
GGAAAATGGCTACACAAACA+GGG + chr2_2:3594267-3594286 None:intergenic 40.0%
AGGAAAATGGCTACACAAAC+AGG + chr2_2:3594268-3594287 None:intergenic 40.0%
TAGAAGAAGAGACTGCTAAG+AGG - chr2_2:3594343-3594362 Msa0231370:intron 40.0%
AGAAGAAGAGACTGCTAAGA+GGG - chr2_2:3594344-3594363 Msa0231370:intron 40.0%
TGATGAAAGCTTGAGTTCTG+AGG - chr2_2:3594392-3594411 Msa0231370:intron 40.0%
TCTCATGTAGACAAAGAAGC+TGG + chr2_2:3594948-3594967 None:intergenic 40.0%
ACTACAACACTTATTTCCGC+AGG - chr2_2:3594967-3594986 Msa0231370:intron 40.0%
! TGATTTTACGCTTGTTCCTG+CGG + chr2_2:3594986-3595005 None:intergenic 40.0%
AGATCTTGAAAGGATGCTTG+AGG - chr2_2:3595078-3595097 Msa0231370:intron 40.0%
AAAGGATGCTTGAGGAAAAC+AGG - chr2_2:3595086-3595105 Msa0231370:intron 40.0%
! CCGAGAGCAAATGACAATTT+TGG + chr2_2:3595292-3595311 None:intergenic 40.0%
! ATTTTCGCTACATGAGTCCT+CGG - chr2_2:3595487-3595506 Msa0231370:CDS 40.0%
GTAAATAGGAGTAATAGCCG+AGG + chr2_2:3595507-3595526 None:intergenic 40.0%
CCTCCTTCCATTGTAGACTA+TGG + chr2_2:3584807-3584826 None:intergenic 45.0%
CCATAGTCTACAATGGAAGG+AGG - chr2_2:3584804-3584823 Msa0231370:three_prime_UTR 45.0%
GGAGGTCATATACAAGACCA+AGG - chr2_2:3584822-3584841 Msa0231370:three_prime_UTR 45.0%
!!! GGTTTTTTCTTGTCTCGGCT+TGG + chr2_2:3584878-3584897 None:intergenic 45.0%
! CTTGGATTGCTTGGAAGCAT+TGG + chr2_2:3584993-3585012 None:intergenic 45.0%
CAATGCTTCCAAGCAATCCA+AGG - chr2_2:3584991-3585010 Msa0231370:three_prime_UTR 45.0%
!! TGAAGTGCTTTTCTGCTTGC+TGG + chr2_2:3585129-3585148 None:intergenic 45.0%
!! ATTCTCTTTGGAGCAGCCTT+GGG + chr2_2:3585361-3585380 None:intergenic 45.0%
!! AATTCTCTTTGGAGCAGCCT+TGG + chr2_2:3585362-3585381 None:intergenic 45.0%
GCTGCTCCAAAGAGAATTAG+AGG - chr2_2:3585364-3585383 Msa0231370:intron 45.0%
TTGTTATGCGCACATGTTGC+TGG + chr2_2:3585415-3585434 None:intergenic 45.0%
! GTTGATGAGGTCACCTTTGT+TGG + chr2_2:3585632-3585651 None:intergenic 45.0%
CATACGAAAGGTGAATGCCA+CGG - chr2_2:3585651-3585670 Msa0231370:intron 45.0%
ATACGAAAGGTGAATGCCAC+GGG - chr2_2:3585652-3585671 Msa0231370:intron 45.0%
ATTGCTGCACATATTTCCCG+TGG + chr2_2:3585671-3585690 None:intergenic 45.0%
GTAAACATGGCATCCATGGA+AGG - chr2_2:3586491-3586510 Msa0231370:three_prime_UTR 45.0%
TAGATACCGGTGCTCGTATT+TGG + chr2_2:3587071-3587090 None:intergenic 45.0%
GGAAAACTCACACACACAAG+TGG + chr2_2:3587671-3587690 None:intergenic 45.0%
AGACAAAACGGTGATTGCCA+TGG + chr2_2:3587692-3587711 None:intergenic 45.0%
! TGAGCGTAGCTTAGTTGGTA+TGG - chr2_2:3588068-3588087 Msa0231370:three_prime_UTR 45.0%
! AGGGTTGAAACACGATTTGG+GGG + chr2_2:3588372-3588391 None:intergenic 45.0%
GAGGGTTGAAACACGATTTG+GGG + chr2_2:3588373-3588392 None:intergenic 45.0%
GTGAGGGTTGAAACACGATT+TGG + chr2_2:3588375-3588394 None:intergenic 45.0%
GAGGAGGGAAGATGAAAAGA+TGG - chr2_2:3588437-3588456 Msa0231370:three_prime_UTR 45.0%
AGATGGAGACATGGGTGATT+TGG - chr2_2:3588454-3588473 Msa0231370:three_prime_UTR 45.0%
CGCATCTCCTGATCCATTAA+GGG - chr2_2:3588485-3588504 Msa0231370:three_prime_UTR 45.0%
! TTTTGAGCTCATTGGGGATC+GGG - chr2_2:3589559-3589578 Msa0231370:intron 45.0%
TATCTATGTCCAACCGGTGA+CGG + chr2_2:3589649-3589668 None:intergenic 45.0%
CGGTTGGACATAGATATAGC+AGG - chr2_2:3589653-3589672 Msa0231370:intron 45.0%
GGTCTCCATATTCGTATAGC+AGG - chr2_2:3589698-3589717 Msa0231370:intron 45.0%
GGTCACCTGCTATACGAATA+TGG + chr2_2:3589706-3589725 None:intergenic 45.0%
!! TTAACCAGGGGTTAGCTTTG+AGG - chr2_2:3590169-3590188 Msa0231370:intron 45.0%
! CGAGTTGAGCTTAACAGAAG+AGG + chr2_2:3590607-3590626 None:intergenic 45.0%
CTCGTTGAGCACTTGAACTA+TGG - chr2_2:3590623-3590642 Msa0231370:CDS 45.0%
TGAGATGCATGCTGTTATGC+TGG - chr2_2:3590648-3590667 Msa0231370:CDS 45.0%
AAGACCCTGTCATAAGTGTC+CGG - chr2_2:3590702-3590721 Msa0231370:CDS 45.0%
ATCACCGGACACTTATGACA+GGG + chr2_2:3590709-3590728 None:intergenic 45.0%
AAAGTATGCGACACCATCAC+CGG + chr2_2:3590724-3590743 None:intergenic 45.0%
! GGTTTCTTATTTGTGTGCCG+AGG - chr2_2:3590785-3590804 Msa0231370:intron 45.0%
AATCTTCCAGTTCAAGCCTC+GGG - chr2_2:3591284-3591303 Msa0231370:intron 45.0%
AATTAGCATGCTCCACTTCC+AGG - chr2_2:3591662-3591681 Msa0231370:intron 45.0%
ATTAGCATGCTCCACTTCCA+GGG - chr2_2:3591663-3591682 Msa0231370:intron 45.0%
GTAGCATAGCCCTTAGTCTA+TGG + chr2_2:3591799-3591818 None:intergenic 45.0%
ATGGAGTGGAGAAGCAATAG+GGG + chr2_2:3591831-3591850 None:intergenic 45.0%
GATGGAGTGGAGAAGCAATA+GGG + chr2_2:3591832-3591851 None:intergenic 45.0%
!! TGACTAGTTGATGGCCTTGT+TGG - chr2_2:3591884-3591903 Msa0231370:intron 45.0%
CTGATATCCACAAAGGAGAC+AGG + chr2_2:3591996-3592015 None:intergenic 45.0%
GTATGAATTTGCAGAGGGGT+TGG - chr2_2:3592042-3592061 Msa0231370:intron 45.0%
AACGAAAAGCAGGGGAGAAT+AGG + chr2_2:3592134-3592153 None:intergenic 45.0%
!! ATTCTCCCCTGCTTTTCGTT+TGG - chr2_2:3592134-3592153 Msa0231370:intron 45.0%
TGGAGCTCAGTCCAGAATTA+AGG + chr2_2:3592228-3592247 None:intergenic 45.0%
GATGAAACCCACACAGTTTC+AGG + chr2_2:3592368-3592387 None:intergenic 45.0%
! TGCTCGGTGGAGTATTTAAG+TGG - chr2_2:3592746-3592765 Msa0231370:intron 45.0%
! GGTGGAGTATTTAAGTGGCT+TGG - chr2_2:3592751-3592770 Msa0231370:intron 45.0%
GAGAGAATACTTGGGTAGAC+AGG - chr2_2:3593116-3593135 Msa0231370:intron 45.0%
CTAGATGGGAGTAAGCTACA+AGG + chr2_2:3593347-3593366 None:intergenic 45.0%
TGTAGCTTACTCCCATCTAG+CGG - chr2_2:3593347-3593366 Msa0231370:intron 45.0%
! CCAAATTTTTCCCCGCTAGA+TGG + chr2_2:3593362-3593381 None:intergenic 45.0%
CCATCTAGCGGGGAAAAATT+TGG - chr2_2:3593359-3593378 Msa0231370:intron 45.0%
GCGGGGAAAAATTTGGATCT+TGG - chr2_2:3593366-3593385 Msa0231370:intron 45.0%
! CCATGGGTGGAGGTATATAT+GGG - chr2_2:3593466-3593485 Msa0231370:intron 45.0%
! CATGGGTGGAGGTATATATG+GGG - chr2_2:3593467-3593486 Msa0231370:intron 45.0%
AATCTTGTGACCCACCTCAA+AGG - chr2_2:3593543-3593562 Msa0231370:intron 45.0%
ATCTTGTGACCCACCTCAAA+GGG - chr2_2:3593544-3593563 Msa0231370:intron 45.0%
TTCTCCACAGGCTTATCTGA+AGG - chr2_2:3593908-3593927 Msa0231370:intron 45.0%
GGCTTATCTGAAGGAAGGTA+CGG - chr2_2:3593917-3593936 Msa0231370:intron 45.0%
ACTAACCTCCATGGTGACAA+AGG + chr2_2:3594080-3594099 None:intergenic 45.0%
CAACGACAAACTAACCTCCA+TGG + chr2_2:3594089-3594108 None:intergenic 45.0%
!! TGAAAGCTTGAGTTCTGAGG+AGG - chr2_2:3594395-3594414 Msa0231370:intron 45.0%
ATTCAAAGGCGGTTGGAAGA+GGG - chr2_2:3594429-3594448 Msa0231370:intron 45.0%
ATGTTGGTCACTCCAGAGAA+AGG + chr2_2:3594573-3594592 None:intergenic 45.0%
! CAAATCTCCAGTCCTGCTTT+TGG - chr2_2:3594619-3594638 Msa0231370:intron 45.0%
GTAGACAAAGAAGCTGGAAC+TGG + chr2_2:3594942-3594961 None:intergenic 45.0%
AAGCACTAGAGCAGCAAAGA+AGG - chr2_2:3595137-3595156 Msa0231370:intron 45.0%
AGCACTAGAGCAGCAAAGAA+GGG - chr2_2:3595138-3595157 Msa0231370:intron 45.0%
AGAAAGAAGAAGCCATGCGA+AGG - chr2_2:3595200-3595219 Msa0231370:intron 45.0%
! TTCCTGTTTCTTCCTTCGCA+TGG + chr2_2:3595215-3595234 None:intergenic 45.0%
TATCACTCACAGTGAAGCCA+AGG + chr2_2:3595414-3595433 None:intergenic 45.0%
!! TAAAAAAAAAAAAAAAATGT+GGG + chr2_2:3588127-3588146 None:intergenic 5.0%
!! ATAAAAAAAAAAAAAAAATG+TGG + chr2_2:3588128-3588147 None:intergenic 5.0%
!! AATTCAATTTATTAATTTAT+TGG - chr2_2:3588841-3588860 Msa0231370:three_prime_UTR 5.0%
!! ATATGATATTTATAAAAAAT+AGG - chr2_2:3590863-3590882 Msa0231370:intron 5.0%
GGAAGGGCCATAGTCTACAA+TGG - chr2_2:3584797-3584816 Msa0231370:three_prime_UTR 50.0%
GGGCCATAGTCTACAATGGA+AGG - chr2_2:3584801-3584820 Msa0231370:three_prime_UTR 50.0%
!! TTCTTGTCTCGGCTTGGCAT+AGG + chr2_2:3584872-3584891 None:intergenic 50.0%
!! GGAAGCATTGGTTTGGCCTA+TGG + chr2_2:3584981-3585000 None:intergenic 50.0%
CATGCTGTCCTTGGATTGCT+TGG + chr2_2:3585002-3585021 None:intergenic 50.0%
! TGCTGGTGGTTGTTGTTGCT+AGG + chr2_2:3585398-3585417 None:intergenic 50.0%
TTATGCGCACATGTTGCTGG+TGG + chr2_2:3585412-3585431 None:intergenic 50.0%
TATCCGCCAAATACGAGCAC+CGG - chr2_2:3587062-3587081 Msa0231370:three_prime_UTR 50.0%
ATACCGGTGCTCGTATTTGG+CGG + chr2_2:3587068-3587087 None:intergenic 50.0%
AAAGCTCGCGTGAAAAACCC+AGG + chr2_2:3588247-3588266 None:intergenic 50.0%
! GGTTGAAACACGATTTGGGG+GGG + chr2_2:3588370-3588389 None:intergenic 50.0%
! GGGTTGAAACACGATTTGGG+GGG + chr2_2:3588371-3588390 None:intergenic 50.0%
GCGCATCTCCTGATCCATTA+AGG - chr2_2:3588484-3588503 Msa0231370:three_prime_UTR 50.0%
ATGTGGCTCACGTAAGCAGA+AGG + chr2_2:3588531-3588550 None:intergenic 50.0%
TTTGCCTCAAAGCTAACCCC+TGG + chr2_2:3590176-3590195 None:intergenic 50.0%
CATCACCGGACACTTATGAC+AGG + chr2_2:3590710-3590729 None:intergenic 50.0%
CTGTCATAAGTGTCCGGTGA+TGG - chr2_2:3590708-3590727 Msa0231370:CDS 50.0%
!! TAACATGCTAGATGGTGGGC+AGG - chr2_2:3591050-3591069 Msa0231370:CDS 50.0%
CGACGCCAAGTAGTTGTAGA+AGG + chr2_2:3591190-3591209 None:intergenic 50.0%
! TTTTCTGCTCTACTGACCCG+AGG + chr2_2:3591303-3591322 None:intergenic 50.0%
ATCAGTAGATGCCCTGGAAG+TGG + chr2_2:3591677-3591696 None:intergenic 50.0%
GGATGGAGTGGAGAAGCAAT+AGG + chr2_2:3591833-3591852 None:intergenic 50.0%
TCGAGTCCCTGAAACTGTGT+GGG - chr2_2:3592358-3592377 Msa0231370:intron 50.0%
TTGTTGAGGGCTTGAGGTTG+AGG - chr2_2:3592570-3592589 Msa0231370:intron 50.0%
TGTTGAGGGCTTGAGGTTGA+GGG - chr2_2:3592571-3592590 Msa0231370:intron 50.0%
GAGTAGTATGAGATGCTCGG+TGG - chr2_2:3592733-3592752 Msa0231370:intron 50.0%
TCAAGGAGGTTGACCAGCTA+TGG - chr2_2:3593223-3593242 Msa0231370:intron 50.0%
GTAGCTTACTCCCATCTAGC+GGG - chr2_2:3593348-3593367 Msa0231370:intron 50.0%
TAGCTTACTCCCATCTAGCG+GGG - chr2_2:3593349-3593368 Msa0231370:intron 50.0%
ACCTTTGCCCCACCAAATGT+GGG + chr2_2:3593441-3593460 None:intergenic 50.0%
! GCCATGGGTGGAGGTATATA+TGG - chr2_2:3593465-3593484 Msa0231370:intron 50.0%
CCCATATATACCTCCACCCA+TGG + chr2_2:3593469-3593488 None:intergenic 50.0%
CCTTCCTTCAGATAAGCCTG+TGG + chr2_2:3593915-3593934 None:intergenic 50.0%
CCACAGGCTTATCTGAAGGA+AGG - chr2_2:3593912-3593931 Msa0231370:intron 50.0%
TAGTGCCTTTGTCACCATGG+AGG - chr2_2:3594072-3594091 Msa0231370:intron 50.0%
ATGCTTTCACAGGCGTCAAC+AGG - chr2_2:3594302-3594321 Msa0231370:intron 50.0%
!! GCTTGAGTTCTGAGGAGGTT+CGG - chr2_2:3594400-3594419 Msa0231370:intron 50.0%
!! CTTGAGTTCTGAGGAGGTTC+GGG - chr2_2:3594401-3594420 Msa0231370:intron 50.0%
AGGTTCGGGTGGAGATTCAA+AGG - chr2_2:3594415-3594434 Msa0231370:intron 50.0%
TTCGGGTGGAGATTCAAAGG+CGG - chr2_2:3594418-3594437 Msa0231370:intron 50.0%
GATTCAAAGGCGGTTGGAAG+AGG - chr2_2:3594428-3594447 Msa0231370:intron 50.0%
TTGTTCCCTGAGCAAGTCCA+AGG - chr2_2:3594757-3594776 Msa0231370:intron 50.0%
GGATGCTTGAGGAAAACAGG+AGG - chr2_2:3595089-3595108 Msa0231370:intron 50.0%
ACTAGAGCAGCAAAGAAGGG+AGG - chr2_2:3595141-3595160 Msa0231370:intron 50.0%
AGCCATGCGAAGGAAGAAAC+AGG - chr2_2:3595210-3595229 Msa0231370:intron 50.0%
GCGAAGGAAGAAACAGGAAG+AGG - chr2_2:3595216-3595235 Msa0231370:intron 50.0%
!! TTCTTGTCTCGGCTCGGCAT+CGG + chr2_2:3584764-3584783 None:intergenic 55.0%
!! TGTCTCGGCTTGGCATAGGA+GGG + chr2_2:3584868-3584887 None:intergenic 55.0%
!! TTGTCTCGGCTTGGCATAGG+AGG + chr2_2:3584869-3584888 None:intergenic 55.0%
! GAGCTCTAGCATGCTGTCCT+TGG + chr2_2:3585011-3585030 None:intergenic 55.0%
AAGCTACGCTCACGAGGACA+AGG + chr2_2:3588060-3588079 None:intergenic 55.0%
CCAACTAAGCTACGCTCACG+AGG + chr2_2:3588066-3588085 None:intergenic 55.0%
CCTCGTGAGCGTAGCTTAGT+TGG - chr2_2:3588063-3588082 Msa0231370:three_prime_UTR 55.0%
GGCTCACGTAAGCAGAAGGT+AGG + chr2_2:3588527-3588546 None:intergenic 55.0%
CTCATTGGGGATCGGGTGTT+GGG - chr2_2:3589566-3589585 Msa0231370:intron 55.0%
GGTGAATGCCTACGCCTGTA+GGG + chr2_2:3589628-3589647 None:intergenic 55.0%
GGAGCAGACGTGATAGAAGC+CGG - chr2_2:3589677-3589696 Msa0231370:intron 55.0%
TACTGACCCGAGGCTTGAAC+TGG + chr2_2:3591293-3591312 None:intergenic 55.0%
GTCGAGTCCCTGAAACTGTG+TGG - chr2_2:3592357-3592376 Msa0231370:intron 55.0%
ACTCCTCATTCTCTCTGCGC+TGG - chr2_2:3592836-3592855 Msa0231370:intron 55.0%
TTTGCCCCACCAAATGTGGG+GGG + chr2_2:3593438-3593457 None:intergenic 55.0%
CTTTGCCCCACCAAATGTGG+GGG + chr2_2:3593439-3593458 None:intergenic 55.0%
CCTTTGCCCCACCAAATGTG+GGG + chr2_2:3593440-3593459 None:intergenic 55.0%
GACCTTTGCCCCACCAAATG+TGG + chr2_2:3593442-3593461 None:intergenic 55.0%
TGGGGCAAAGGTCTTAGCCA+TGG - chr2_2:3593449-3593468 Msa0231370:intron 55.0%
GGGGCAAAGGTCTTAGCCAT+GGG - chr2_2:3593450-3593469 Msa0231370:intron 55.0%
GCAAAGGTCTTAGCCATGGG+TGG - chr2_2:3593453-3593472 Msa0231370:intron 55.0%
AAGGTCTTAGCCATGGGTGG+AGG - chr2_2:3593456-3593475 Msa0231370:intron 55.0%
!! ATGCCTGGACCCTTTGAGGT+GGG + chr2_2:3593556-3593575 None:intergenic 55.0%
CTTGATGCCTGGACCCTTTG+AGG + chr2_2:3593560-3593579 None:intergenic 55.0%
AAAGGGTCCAGGCATCAAGC+CGG - chr2_2:3593561-3593580 Msa0231370:intron 55.0%
! CATCAAGCCGGCTTACAGAC+TGG - chr2_2:3593573-3593592 Msa0231370:intron 55.0%
GGTGGAGATTCAAAGGCGGT+TGG - chr2_2:3594422-3594441 Msa0231370:intron 55.0%
TTCCCTGAGCAAGTCCAAGG+AGG - chr2_2:3594760-3594779 Msa0231370:intron 55.0%
TCCCTGAGCAAGTCCAAGGA+GGG - chr2_2:3594761-3594780 Msa0231370:intron 55.0%
! ACCCTCCTTGGACTTGCTCA+GGG + chr2_2:3594765-3594784 None:intergenic 55.0%
! TACCCTCCTTGGACTTGCTC+AGG + chr2_2:3594766-3594785 None:intergenic 55.0%
!! TCCAAGGAGGGTACCAGTTG+AGG - chr2_2:3594773-3594792 Msa0231370:intron 55.0%
!! CCAAGGAGGGTACCAGTTGA+GGG - chr2_2:3594774-3594793 Msa0231370:intron 55.0%
AGAGCAGCAAAGAAGGGAGG+AGG - chr2_2:3595144-3595163 Msa0231370:intron 55.0%
CACTCACAGTGAAGCCAAGG+AGG + chr2_2:3595411-3595430 None:intergenic 55.0%
GCTCATTGGGGATCGGGTGT+TGG - chr2_2:3589565-3589584 Msa0231370:intron 60.0%
!! ATTGGGGATCGGGTGTTGGG+AGG - chr2_2:3589569-3589588 Msa0231370:intron 60.0%
CGGGATCGCGACAAGTCTCT+AGG + chr2_2:3589598-3589617 None:intergenic 60.0%
TACGCCTGTAGGGAGGCGAT+CGG + chr2_2:3589618-3589637 None:intergenic 60.0%
GAATGCCTACGCCTGTAGGG+AGG + chr2_2:3589625-3589644 None:intergenic 60.0%
CGGTGAATGCCTACGCCTGT+AGG + chr2_2:3589629-3589648 None:intergenic 60.0%
GCGTAGGCATTCACCGTCAC+CGG - chr2_2:3589633-3589652 Msa0231370:intron 60.0%
AGGCATTCACCGTCACCGGT+TGG - chr2_2:3589637-3589656 Msa0231370:intron 60.0%
GAAGGACTTCTGCGGCCTCT+TGG + chr2_2:3591172-3591191 None:intergenic 60.0%
GGACTGAGCTCCATCCTTGC+AGG - chr2_2:3592235-3592254 Msa0231370:intron 60.0%
CCACCAGCGCAGAGAGAATG+AGG + chr2_2:3592842-3592861 None:intergenic 60.0%
CCTCATTCTCTCTGCGCTGG+TGG - chr2_2:3592839-3592858 Msa0231370:intron 60.0%
TTGCCCCACCAAATGTGGGG+GGG + chr2_2:3593437-3593456 None:intergenic 60.0%
! CCCCACATTTGGTGGGGCAA+AGG - chr2_2:3593437-3593456 Msa0231370:intron 60.0%
TGACCCACCTCAAAGGGTCC+AGG - chr2_2:3593550-3593569 Msa0231370:intron 60.0%
! GATGCCTGGACCCTTTGAGG+TGG + chr2_2:3593557-3593576 None:intergenic 60.0%
!! CTGTAAGCCGGCTTGATGCC+TGG + chr2_2:3593571-3593590 None:intergenic 60.0%
!! GAGTTCTGAGGAGGTTCGGG+TGG - chr2_2:3594404-3594423 Msa0231370:intron 60.0%
CCCTCAACTGGTACCCTCCT+TGG + chr2_2:3594777-3594796 None:intergenic 60.0%
!! TGTCTCGGCTCGGCATCGGA+GGG + chr2_2:3584760-3584779 None:intergenic 65.0%
!! TTGTCTCGGCTCGGCATCGG+AGG + chr2_2:3584761-3584780 None:intergenic 65.0%
GATCCCGATCGCCTCCCTAC+AGG - chr2_2:3589611-3589630 Msa0231370:intron 65.0%
ACGCCTGTAGGGAGGCGATC+GGG + chr2_2:3589617-3589636 None:intergenic 65.0%
GATCGCCTCCCTACAGGCGT+AGG - chr2_2:3589617-3589636 Msa0231370:intron 65.0%
TGCCCCACCAAATGTGGGGG+GGG + chr2_2:3593436-3593455 None:intergenic 65.0%
ACCAAATGTGGGGGGGGGGG+GGG + chr2_2:3593430-3593449 None:intergenic 70.0%
CACCAAATGTGGGGGGGGGG+GGG + chr2_2:3593431-3593450 None:intergenic 70.0%
CCACCAAATGTGGGGGGGGG+GGG + chr2_2:3593432-3593451 None:intergenic 70.0%
CCCACCAAATGTGGGGGGGG+GGG + chr2_2:3593433-3593452 None:intergenic 70.0%
CCCCCCCCCCCACATTTGGT+GGG - chr2_2:3593430-3593449 Msa0231370:intron 70.0%
CCCCACCAAATGTGGGGGGG+GGG + chr2_2:3593434-3593453 None:intergenic 70.0%
! CCCCCCCCCCACATTTGGTG+GGG - chr2_2:3593431-3593450 Msa0231370:intron 70.0%
GCCCCACCAAATGTGGGGGG+GGG + chr2_2:3593435-3593454 None:intergenic 70.0%
AAATGTGGGGGGGGGGGGGG+GGG + chr2_2:3593427-3593446 None:intergenic 75.0%
CAAATGTGGGGGGGGGGGGG+GGG + chr2_2:3593428-3593447 None:intergenic 75.0%
CCAAATGTGGGGGGGGGGGG+GGG + chr2_2:3593429-3593448 None:intergenic 75.0%
CCCCCCCCCCCCACATTTGG+TGG - chr2_2:3593429-3593448 Msa0231370:intron 75.0%
! AATGTGGGGGGGGGGGGGGG+GGG + chr2_2:3593426-3593445 None:intergenic 80.0%
! CCCCCCCCCCCCCCCACATT+TGG - chr2_2:3593426-3593445 Msa0231370:intron 80.0%
! ATGTGGGGGGGGGGGGGGGG+GGG + chr2_2:3593425-3593444 None:intergenic 85.0%
! TGTGGGGGGGGGGGGGGGGG+GGG + chr2_2:3593424-3593443 None:intergenic 90.0%
! GGGGGGGGGGGGGGGGGGGA+AGG + chr2_2:3593416-3593435 None:intergenic 95.0%
! TGGGGGGGGGGGGGGGGGGG+GGG + chr2_2:3593422-3593441 None:intergenic 95.0%
! GTGGGGGGGGGGGGGGGGGG+GGG + chr2_2:3593423-3593442 None:intergenic 95.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 3584754 3595566 3584754 ID=Msa0231370;Name=Msa0231370
chr2_2 mRNA 3584754 3595566 3584754 ID=Msa0231370-mRNA-1;Parent=Msa0231370;Name=Msa0231370-mRNA-1;_AED=0.17;_eAED=0.17;_QI=0|0.8|0.66|0.83|0.8|0.66|6|3712|273
chr2_2 exon 3584754 3585265 3584754 ID=Msa0231370-mRNA-1:exon:1475;Parent=Msa0231370-mRNA-1
chr2_2 exon 3585787 3586877 3585787 ID=Msa0231370-mRNA-1:exon:1474;Parent=Msa0231370-mRNA-1
chr2_2 exon 3586898 3589173 3586898 ID=Msa0231370-mRNA-1:exon:1473;Parent=Msa0231370-mRNA-1
chr2_2 exon 3590601 3590797 3590601 ID=Msa0231370-mRNA-1:exon:1472;Parent=Msa0231370-mRNA-1
chr2_2 exon 3591018 3591145 3591018 ID=Msa0231370-mRNA-1:exon:1471;Parent=Msa0231370-mRNA-1
chr2_2 exon 3595237 3595566 3595237 ID=Msa0231370-mRNA-1:exon:1470;Parent=Msa0231370-mRNA-1
chr2_2 CDS 3595237 3595566 3595237 ID=Msa0231370-mRNA-1:cds;Parent=Msa0231370-mRNA-1
chr2_2 CDS 3591018 3591145 3591018 ID=Msa0231370-mRNA-1:cds;Parent=Msa0231370-mRNA-1
chr2_2 CDS 3590601 3590797 3590601 ID=Msa0231370-mRNA-1:cds;Parent=Msa0231370-mRNA-1
chr2_2 CDS 3589007 3589173 3589007 ID=Msa0231370-mRNA-1:cds;Parent=Msa0231370-mRNA-1
chr2_2 three_prime_UTR 3586898 3589006 3586898 ID=Msa0231370-mRNA-1:three_prime_utr;Parent=Msa0231370-mRNA-1
chr2_2 three_prime_UTR 3585787 3586877 3585787 ID=Msa0231370-mRNA-1:three_prime_utr;Parent=Msa0231370-mRNA-1
chr2_2 three_prime_UTR 3584754 3585265 3584754 ID=Msa0231370-mRNA-1:three_prime_utr;Parent=Msa0231370-mRNA-1
Gene Sequence

>Msa0231370

ATGCCCTCCGATGCCGAGCCGAGACAAGAAAAATCAAATGCAAGGAAGGGCCATAGTCTACAATGGAAGGAGGTCATATACAAGACCAAGGTTCCAAAGATAAAAGTGATGCCCTCCTATGCCAAGCCGAGACAAGAAAAAACCAAATGCAAGCCAATAGAGATGCATAACCATGTGATGTGTCTTCAAACCATAGAAAACAAAGCCATGTTGATGCATTCAAACCATAGGCCAAACCAATGCTTCCAAGCAATCCAAGGACAGCATGCTAGAGCTCAACAAAGAAACCAACATGTTGAAAACCAATGGCTTCAACAAAATAGCAAACAAGGTTTGCAGATTTTCAATTTCCCAATTCCTCCATACTTTCATCTCGATAACCATAAATTCAACTCTATATCACAACACAACATCTCTCTTCCTTTTTCCTCTATTTCAAGTTTCCCTTCATTTTTCAGGGAAACTTTATCTTTGTCTGATTGTGAAAAGTATATTTTTGAGCTCATTGGGGATCGGGTGTTGGGAGGATGCCTAGAGACTTGTCGCGATCCCGATCGCCTCCCTACAGGCGTAGGCATTCACCGTCACCGGTTGGACATAGATATAGCAGGAGGAGCAGACGTGATAGAAGCCGGTCTCCATATTCGTATAGCAGGCGAAAAAGTCGTTCTATTTCACCAAGAGGCCGCAGAAGTCCTTCTACAACTACTTGGCGTCGCAGAAGTCGATCTCCAACTGCAAAACGATACAGAAGACAAAGAAGTAGGAGTTCCTCATTGTCTCCTGCTCATAAATCTTCCAGTTCAAGCCTCGGGTCAGTAG
Protein sequence

>Msa0231370

MPSDAEPRQEKSNARKGHSLQWKEVIYKTKVPKIKVMPSYAKPRQEKTKCKPIEMHNHVMCLQTIENKAMLMHSNHRPNQCFQAIQGQHARAQQRNQHVENQWLQQNSKQGLQIFNFPIPPYFHLDNHKFNSISQHNISLPFSSISSFPSFFRETLSLSDCEKYIFELIGDRVLGGCLETCRDPDRLPTGVGIHRHRLDIDIAGGADVIEAGLHIRIAGEKVVLFHQEAAEVLLQLLGVAEVDLQLQNDTEDKEVGVPHCLLLINLPVQASGQ*