AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0210850


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0210850 MtrunA17_Chr2g0309331 98.841 345 2 2 8 351 1 344 0.0 716
Msa0210850 MtrunA17_Chr8g0346001 74.556 169 31 2 12 169 10 177 6.94e-90 276
Msa0210850 MtrunA17_Chr5g0405211 56.148 244 97 4 12 246 3 245 4.26e-89 271
Msa0210850 MtrunA17_Chr4g0017921 72.067 179 45 4 17 193 8 183 1.66e-88 270
Msa0210850 MtrunA17_Chr4g0056541 48.701 308 116 8 17 299 7 297 8.74e-84 258
Msa0210850 MtrunA17_Chr4g0018391 47.284 313 128 9 17 304 7 307 2.62e-83 256
Msa0210850 MtrunA17_Chr8g0372121 47.751 289 120 5 14 300 3 262 2.83e-83 255
Msa0210850 MtrunA17_Chr5g0398971 44.062 320 119 8 17 304 7 298 3.04e-79 246
Msa0210850 MtrunA17_Chr1g0200561 42.090 354 157 8 14 341 16 347 6.76e-77 240
Msa0210850 MtrunA17_Chr3g0139331 50.909 165 77 2 11 174 5 166 1.58e-58 192
Msa0210850 MtrunA17_Chr6g0484441 53.374 163 72 2 14 176 2 160 3.03e-58 191
Msa0210850 MtrunA17_Chr6g0481091 57.051 156 61 4 15 167 4 156 3.93e-58 188
Msa0210850 MtrunA17_Chr3g0091921 53.846 169 70 3 3 167 2 166 5.28e-58 190
Msa0210850 MtrunA17_Chr1g0147421 53.988 163 70 3 14 174 24 183 7.35e-58 191
Msa0210850 MtrunA17_Chr2g0309891 53.846 156 67 3 15 167 4 157 1.18e-57 190
Msa0210850 MtrunA17_Chr4g0042561 46.970 198 94 4 9 200 1 193 7.59e-57 186
Msa0210850 MtrunA17_Chr2g0318101 41.441 222 112 4 11 217 9 227 8.73e-57 188
Msa0210850 MtrunA17_Chr2g0316971 55.346 159 63 3 17 170 23 178 8.89e-57 189
Msa0210850 MtrunA17_Chr5g0417791 48.148 189 86 5 15 197 1 183 7.00e-56 183
Msa0210850 MtrunA17_Chr4g0060931 52.761 163 69 3 14 172 14 172 7.21e-56 186
Msa0210850 MtrunA17_Chr3g0109821 53.846 156 67 3 15 167 4 157 7.80e-56 193
Msa0210850 MtrunA17_Chr3g0124761 51.220 164 70 3 12 170 2 160 2.30e-54 180
Msa0210850 MtrunA17_Chr7g0253011 53.750 160 64 3 15 167 15 171 2.39e-54 182
Msa0210850 MtrunA17_Chr5g0433781 52.903 155 69 3 15 167 4 156 6.03e-54 187
Msa0210850 MtrunA17_Chr7g0252971 47.368 171 73 3 11 167 2 169 6.52e-54 180
Msa0210850 MtrunA17_Chr6g0453451 50.588 170 76 3 7 172 10 175 9.58e-54 179
Msa0210850 MtrunA17_Chr6g0461661 53.125 160 67 3 15 169 16 172 1.32e-53 181
Msa0210850 MtrunA17_Chr2g0318081 50.595 168 74 4 13 178 12 172 5.57e-53 178
Msa0210850 MtrunA17_Chr3g0130731 50.932 161 69 3 13 168 3 158 3.44e-52 174
Msa0210850 MtrunA17_Chr7g0214071 45.263 190 91 4 8 196 6 183 3.88e-52 173
Msa0210850 MtrunA17_Chr8g0359921 50.296 169 73 4 14 178 11 172 6.63e-52 175
Msa0210850 MtrunA17_Chr5g0400461 50.920 163 68 4 13 167 2 160 1.56e-51 174
Msa0210850 MtrunA17_Chr8g0384721 48.837 172 75 4 9 174 1 165 7.76e-51 171
Msa0210850 MtrunA17_Chr6g0453131 45.029 171 80 3 19 178 17 184 1.11e-50 173
Msa0210850 MtrunA17_Chr2g0312321 50.955 157 68 4 14 167 8 158 1.17e-50 171
Msa0210850 MtrunA17_Chr4g0047841 43.889 180 72 3 17 170 15 191 2.38e-50 171
Msa0210850 MtrunA17_Chr7g0263931 47.126 174 82 3 14 180 8 178 2.43e-50 171
Msa0210850 MtrunA17_Chr7g0217721 51.176 170 62 4 20 172 22 187 2.69e-50 171
Msa0210850 MtrunA17_Chr1g0183741 51.282 156 70 4 16 170 9 159 7.23e-50 168
Msa0210850 MtrunA17_Chr2g0326361 45.550 191 92 4 16 197 13 200 2.21e-49 168
Msa0210850 MtrunA17_Chr3g0144271 47.668 193 88 6 14 199 20 206 4.18e-49 170
Msa0210850 MtrunA17_Chr4g0054791 48.824 170 75 5 9 172 1 164 1.45e-48 166
Msa0210850 MtrunA17_Chr3g0130101 50.658 152 71 3 19 168 9 158 2.09e-48 166
Msa0210850 MtrunA17_Chr7g0261411 51.656 151 67 4 16 165 9 154 2.42e-48 164
Msa0210850 MtrunA17_Chr7g0217711 60.156 128 47 2 20 147 22 145 2.92e-48 160
Msa0210850 MtrunA17_Chr8g0364791 47.647 170 81 4 19 182 8 175 4.23e-48 168
Msa0210850 MtrunA17_Chr5g0428991 52.258 155 70 3 17 169 25 177 8.96e-48 170
Msa0210850 MtrunA17_Chr1g0197351 48.315 178 78 4 16 181 41 216 1.23e-47 167
Msa0210850 MtrunA17_Chr8g0361731 46.012 163 73 3 19 169 16 175 1.46e-47 165
Msa0210850 MtrunA17_Chr5g0417001 41.799 189 94 4 16 193 13 196 1.14e-46 163
Msa0210850 MtrunA17_Chr3g0128111 48.026 152 75 3 20 169 45 194 8.24e-46 156
Msa0210850 MtrunA17_Chr4g0076731 48.026 152 76 1 16 167 53 201 8.34e-46 161
Msa0210850 MtrunA17_Chr1g0201021 47.682 151 75 3 19 167 21 169 8.40e-46 164
Msa0210850 MtrunA17_Chr3g0128151 49.359 156 75 3 16 169 21 174 1.67e-45 164
Msa0210850 MtrunA17_Chr8g0384201 45.882 170 84 4 19 182 8 175 1.34e-44 159
Msa0210850 MtrunA17_Chr3g0092671 46.753 154 78 4 19 170 7 158 5.75e-44 159
Msa0210850 MtrunA17_Chr2g0311651 43.605 172 78 5 13 167 17 186 3.55e-43 151
Msa0210850 MtrunA17_Chr1g0197361 45.294 170 84 5 19 181 10 177 3.77e-43 157
Msa0210850 MtrunA17_Chr2g0311661 41.989 181 86 5 17 180 20 198 1.32e-42 149
Msa0210850 MtrunA17_Chr4g0038751 46.707 167 81 5 19 183 17 177 4.54e-42 148
Msa0210850 MtrunA17_Chr5g0442771 40.782 179 90 4 16 181 17 192 3.24e-41 146
Msa0210850 MtrunA17_Chr8g0385991 40.212 189 100 4 13 193 10 193 1.75e-40 142
Msa0210850 MtrunA17_Chr3g0131911 42.105 171 83 4 12 171 9 174 4.39e-38 136
Msa0210850 MtrunA17_Chr2g0321631 37.766 188 101 5 18 193 5 188 1.90e-35 129
Msa0210850 MtrunA17_Chr3g0113001 54.310 116 45 4 61 169 4 118 1.35e-33 125
Msa0210850 MtrunA17_Chr4g0026141 36.508 189 104 6 14 189 2 187 1.52e-33 125
Msa0210850 MtrunA17_Chr8g0345671 48.462 130 63 4 17 144 11 138 4.48e-32 124
Msa0210850 MtrunA17_Chr8g0345691 45.333 150 75 5 17 164 12 156 3.56e-31 122
Msa0210850 MtrunA17_Chr2g0321741 46.269 134 62 4 37 170 12 135 4.28e-31 120
Msa0210850 MtrunA17_Chr4g0050701 36.364 165 85 5 17 172 11 164 6.65e-31 115
Msa0210850 MtrunA17_Chr3g0113031 55.102 98 33 3 83 172 3 97 2.25e-29 114
Msa0210850 MtrunA17_Chr7g0266701 36.310 168 97 3 17 174 4 171 6.22e-28 109
Msa0210850 MtrunA17_Chr8g0345711 41.212 165 78 8 17 165 12 173 9.41e-28 107
Msa0210850 MtrunA17_Chr8g0345731 41.667 156 79 6 17 167 24 172 8.72e-26 101
Msa0210850 MtrunA17_Chr7g0243371 52.564 78 36 1 73 149 17 94 1.86e-23 94.0
Msa0210850 MtrunA17_Chr8g0345741 44.538 119 62 4 28 144 2 118 6.01e-22 90.9
Msa0210850 MtrunA17_Chr8g0345721 37.419 155 66 5 20 144 38 191 7.00e-22 92.4
Msa0210850 MtrunA17_Chr8g0384351 34.161 161 84 6 8 168 1 139 2.03e-21 90.5
Msa0210850 MtrunA17_Chr3g0130321 31.928 166 89 6 15 166 5 160 6.64e-21 89.4
Msa0210850 MtrunA17_Chr8g0345701 38.065 155 76 6 16 154 6 156 7.43e-21 88.6
Msa0210850 MtrunA17_Chr7g0251661 29.496 139 94 3 8 146 1 135 1.43e-15 73.6
Msa0210850 MtrunA17_Chr7g0251651 30.769 130 86 3 15 144 16 141 4.85e-13 67.0
Msa0210850 MtrunA17_Chr4g0040541 31.737 167 88 7 17 165 48 206 5.08e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0210850 AT1G79580.3 54.005 387 110 12 9 351 9 371 6.98e-116 341
Msa0210850 AT1G79580.5 54.005 387 110 12 9 351 9 371 6.98e-116 341
Msa0210850 AT1G79580.4 54.005 387 110 12 9 351 9 371 6.98e-116 341
Msa0210850 AT1G79580.2 54.005 387 110 12 9 351 9 371 6.98e-116 341
Msa0210850 AT1G79580.1 54.005 387 110 12 9 351 9 371 6.98e-116 341
Msa0210850 AT4G10350.1 48.649 333 135 10 9 321 1 317 5.66e-93 281
Msa0210850 AT2G18060.3 48.052 308 137 6 9 300 1 301 2.04e-92 281
Msa0210850 AT2G18060.1 48.052 308 137 6 9 300 1 301 2.04e-92 281
Msa0210850 AT4G36160.1 49.191 309 121 8 16 300 9 305 6.24e-90 275
Msa0210850 AT4G36160.3 49.191 309 121 8 16 300 9 305 6.24e-90 275
Msa0210850 AT4G36160.2 49.191 309 121 8 16 300 13 309 6.60e-90 275
Msa0210850 AT1G32770.1 48.089 314 109 8 12 298 11 297 8.52e-86 263
Msa0210850 AT1G33280.1 75.817 153 35 2 17 169 8 158 1.98e-85 261
Msa0210850 AT2G46770.1 66.851 181 44 3 13 178 12 191 2.88e-85 262
Msa0210850 AT3G61910.1 68.786 173 38 3 12 169 6 177 4.81e-82 253
Msa0210850 AT5G66300.1 46.358 302 124 8 16 303 11 288 2.52e-80 247
Msa0210850 AT1G12260.2 72.368 152 41 1 17 168 7 157 1.05e-79 247
Msa0210850 AT1G12260.1 72.368 152 41 1 17 168 7 157 1.71e-79 248
Msa0210850 AT1G62700.1 73.026 152 40 1 17 168 7 157 6.83e-79 247
Msa0210850 AT1G62700.2 73.026 152 40 1 17 168 7 157 6.83e-79 247
Msa0210850 AT1G71930.2 44.595 296 125 7 16 299 8 276 3.65e-77 240
Msa0210850 AT1G71930.1 44.595 296 125 7 16 299 8 276 3.65e-77 240
Msa0210850 AT5G62380.2 65.823 158 53 1 17 174 7 163 1.88e-76 239
Msa0210850 AT5G62380.1 65.823 158 53 1 17 174 7 163 1.88e-76 239
Msa0210850 AT4G10350.2 44.643 280 119 10 62 321 7 270 6.74e-61 197
Msa0210850 AT2G24430.2 55.215 163 68 3 14 174 13 172 1.40e-59 194
Msa0210850 AT2G24430.1 55.215 163 68 3 14 174 13 172 1.40e-59 194
Msa0210850 AT3G17730.1 54.217 166 70 4 15 177 4 166 1.82e-58 189
Msa0210850 AT1G69490.1 50.000 170 75 3 9 172 1 166 1.05e-57 188
Msa0210850 AT5G07680.1 56.962 158 60 3 14 167 14 167 1.33e-57 190
Msa0210850 AT5G07680.2 57.325 157 59 3 15 167 1 153 1.48e-57 189
Msa0210850 AT3G18400.1 57.051 156 60 4 14 167 2 152 4.39e-57 188
Msa0210850 AT5G39610.1 52.381 168 72 3 5 168 8 171 4.62e-57 187
Msa0210850 AT1G76420.1 55.128 156 65 3 14 167 19 171 1.62e-56 187
Msa0210850 AT5G61430.1 55.696 158 62 3 14 167 13 166 1.72e-56 187
Msa0210850 AT1G65910.1 49.724 181 83 4 15 193 4 178 3.22e-56 194
Msa0210850 AT1G61110.1 46.154 182 81 2 11 178 10 188 5.08e-56 186
Msa0210850 AT5G17260.1 55.128 156 65 3 15 167 4 157 8.57e-56 189
Msa0210850 AT1G77450.1 48.315 178 82 3 8 180 1 173 1.18e-55 182
Msa0210850 AT5G18270.2 48.223 197 89 5 11 200 14 204 1.61e-55 185
Msa0210850 AT3G03200.1 55.769 156 64 3 15 167 4 157 3.29e-55 188
Msa0210850 AT5G18270.1 47.716 197 90 5 11 200 14 204 4.79e-55 183
Msa0210850 AT3G04060.1 53.503 157 66 2 15 167 18 171 1.77e-54 182
Msa0210850 AT1G54330.1 56.209 153 64 3 15 167 4 153 2.07e-54 181
Msa0210850 AT3G29035.1 53.293 167 70 3 3 165 10 172 2.49e-54 181
Msa0210850 AT3G15170.1 53.086 162 68 3 14 170 17 175 4.81e-54 180
Msa0210850 AT5G46590.1 54.430 158 68 2 13 167 2 158 6.97e-54 179
Msa0210850 AT5G63790.1 46.524 187 83 4 7 181 35 216 4.07e-53 178
Msa0210850 AT5G63790.2 46.524 187 83 4 7 181 45 226 4.16e-53 178
Msa0210850 AT3G04070.2 47.486 179 78 3 8 173 1 176 5.57e-53 178
Msa0210850 AT5G53950.1 53.205 156 65 3 17 167 17 169 7.06e-53 179
Msa0210850 AT4G27410.2 48.087 183 85 5 14 194 11 185 3.63e-52 175
Msa0210850 AT3G15500.1 49.686 159 74 3 14 170 11 165 4.18e-52 175
Msa0210850 AT5G08790.1 50.595 168 71 4 14 174 4 166 6.73e-52 174
Msa0210850 AT5G46590.2 57.447 141 59 1 13 153 2 141 7.88e-52 173
Msa0210850 AT1G52890.1 49.686 159 74 3 14 170 11 165 1.02e-51 174
Msa0210850 AT3G12977.1 52.229 157 68 3 14 167 15 167 2.12e-51 172
Msa0210850 AT3G04070.1 42.991 214 82 5 8 184 1 211 3.65e-51 174
Msa0210850 AT1G01720.1 46.409 181 78 4 15 181 5 180 4.98e-51 172
Msa0210850 AT5G04410.1 51.534 163 74 4 11 170 2 162 6.97e-51 178
Msa0210850 AT3G15510.1 39.713 209 100 5 21 209 21 223 3.29e-50 172
Msa0210850 AT3G10500.1 51.534 163 74 4 11 170 2 162 3.33e-50 176
Msa0210850 AT3G10490.1 49.133 173 79 4 16 181 26 196 4.23e-50 167
Msa0210850 AT5G24590.2 51.923 156 72 2 16 169 12 166 5.35e-50 173
Msa0210850 AT2G33480.2 48.466 163 77 2 9 171 7 162 7.77e-50 168
Msa0210850 AT3G10480.1 51.592 157 71 3 16 169 26 180 1.99e-49 172
Msa0210850 AT4G27410.3 45.685 197 86 6 14 194 11 202 2.72e-49 168
Msa0210850 AT2G33480.1 49.091 165 75 3 9 171 7 164 3.47e-49 166
Msa0210850 AT3G10490.2 51.592 157 71 3 16 169 26 180 9.71e-49 170
Msa0210850 AT5G39820.1 43.386 189 79 5 16 180 19 203 2.47e-48 166
Msa0210850 AT4G17980.1 51.875 160 71 4 13 167 2 160 5.51e-48 163
Msa0210850 AT5G13180.1 49.057 159 73 3 12 168 9 161 1.32e-47 162
Msa0210850 AT3G10480.2 51.592 157 70 4 16 169 26 179 1.69e-47 167
Msa0210850 AT4G17980.2 51.875 160 71 4 13 167 2 160 1.81e-47 162
Msa0210850 AT2G43000.1 48.101 158 75 3 19 173 20 173 1.99e-47 162
Msa0210850 AT1G56010.2 47.674 172 76 5 2 167 8 171 2.84e-47 163
Msa0210850 AT1G26870.1 46.951 164 72 3 19 170 18 178 3.86e-47 165
Msa0210850 AT3G49530.2 47.742 155 78 2 16 168 12 165 7.17e-47 164
Msa0210850 AT5G09330.5 40.179 224 120 6 13 227 2 220 1.06e-46 166
Msa0210850 AT5G09330.2 40.179 224 120 6 13 227 2 220 1.06e-46 166
Msa0210850 AT5G09330.4 40.179 224 120 6 13 227 2 220 1.06e-46 166
Msa0210850 AT5G09330.3 40.179 224 120 6 13 227 2 220 1.06e-46 166
Msa0210850 AT5G09330.1 40.179 224 120 6 13 227 2 220 1.06e-46 166
Msa0210850 AT3G49530.1 45.614 171 86 3 16 180 12 181 1.64e-46 164
Msa0210850 AT2G02450.1 44.199 181 88 2 17 197 51 218 3.54e-46 161
Msa0210850 AT2G02450.2 44.199 181 88 2 17 197 51 218 4.16e-46 162
Msa0210850 AT4G28530.1 48.521 169 63 7 17 167 10 172 9.31e-45 157
Msa0210850 AT3G10480.3 41.951 205 79 4 16 181 26 229 1.05e-44 160
Msa0210850 AT1G52880.1 40.090 222 107 6 21 224 21 234 1.06e-44 156
Msa0210850 AT5G64060.1 43.750 176 91 4 13 182 2 175 1.96e-44 156
Msa0210850 AT1G33060.2 47.337 169 83 4 16 180 23 189 2.72e-44 161
Msa0210850 AT1G33060.1 47.337 169 83 4 16 180 23 189 3.11e-44 161
Msa0210850 AT4G35580.1 49.359 156 75 3 16 169 8 161 8.16e-44 158
Msa0210850 AT4G35580.3 49.359 156 75 3 16 169 8 161 8.42e-44 158
Msa0210850 AT4G35580.2 49.359 156 75 3 16 169 8 161 8.90e-44 158
Msa0210850 AT1G32510.1 46.250 160 76 3 17 167 6 164 9.32e-44 152
Msa0210850 AT5G22290.1 41.899 179 97 3 16 194 20 191 1.60e-42 151
Msa0210850 AT1G34190.1 43.709 151 81 3 19 167 18 166 2.05e-42 155
Msa0210850 AT2G27300.1 40.113 177 93 4 9 180 1 169 9.78e-42 149
Msa0210850 AT1G34180.3 41.722 151 84 3 19 167 18 166 4.65e-41 149
Msa0210850 AT2G17040.1 43.636 165 85 4 19 181 8 166 5.03e-41 145
Msa0210850 AT1G34180.1 41.722 151 84 3 19 167 18 166 9.38e-41 150
Msa0210850 AT3G44290.2 44.079 152 75 4 19 170 16 157 2.72e-39 139
Msa0210850 AT1G34180.4 39.877 163 82 5 19 167 18 178 5.42e-39 144
Msa0210850 AT5G04395.1 45.860 157 73 2 8 152 19 175 9.43e-39 136
Msa0210850 AT1G34180.2 39.877 163 82 5 19 167 18 178 1.03e-38 145
Msa0210850 AT3G44290.1 44.079 152 75 4 19 170 16 157 1.67e-38 140
Msa0210850 AT2G18060.2 38.356 219 112 6 98 300 2 213 2.81e-38 138
Msa0210850 AT3G12910.1 40.331 181 84 5 19 180 23 198 6.31e-38 138
Msa0210850 AT5G61430.2 59.596 99 35 2 73 167 6 103 7.19e-36 131
Msa0210850 AT1G32870.1 41.772 158 84 4 17 170 10 163 2.92e-34 132
Msa0210850 AT1G32870.2 41.772 158 84 4 17 170 10 163 2.95e-34 132
Msa0210850 AT1G32870.3 41.772 158 84 4 17 170 46 199 4.08e-34 132
Msa0210850 AT3G12977.2 54.128 109 43 3 62 167 10 114 2.00e-33 124
Msa0210850 AT1G56010.1 55.102 98 38 2 75 167 8 104 8.66e-32 120
Msa0210850 AT5G22380.1 36.364 176 97 6 14 179 4 174 8.67e-29 112
Msa0210850 AT3G44350.2 33.333 189 111 6 14 194 4 185 1.07e-28 112
Msa0210850 AT2G33480.3 50.000 106 50 2 68 171 3 107 1.22e-28 110
Msa0210850 AT5G64530.1 35.882 170 77 6 15 167 1 155 9.54e-27 105
Msa0210850 AT3G44350.1 40.146 137 72 4 14 145 4 135 1.17e-26 103
Msa0210850 AT5G64530.2 41.481 135 63 5 15 148 1 120 2.62e-26 103
Msa0210850 AT1G02230.1 44.275 131 65 5 18 144 4 130 5.39e-25 104
Msa0210850 AT4G28530.2 42.017 119 48 4 17 118 10 124 1.40e-24 102
Msa0210850 AT3G04420.2 41.860 129 71 4 18 144 4 130 1.80e-23 99.0
Msa0210850 AT4G01520.1 37.423 163 93 6 18 175 5 163 3.41e-23 98.2
Msa0210850 AT3G04420.1 41.860 129 71 4 18 144 4 130 3.44e-23 99.0
Msa0210850 AT4G01540.4 37.654 162 90 7 20 175 7 163 1.52e-22 97.8
Msa0210850 AT4G01540.3 37.654 162 90 7 20 175 7 163 1.77e-22 98.2
Msa0210850 AT4G01540.2 37.654 162 90 7 20 175 7 163 1.91e-22 97.8
Msa0210850 AT4G01550.1 37.086 151 88 4 20 167 7 153 1.94e-22 98.2
Msa0210850 AT4G01540.1 37.654 162 90 7 20 175 7 163 2.44e-22 98.2
Msa0210850 AT1G02250.1 42.424 132 66 5 18 144 4 130 1.56e-21 94.7
Msa0210850 AT2G43000.2 44.681 94 48 2 82 172 2 94 9.45e-21 89.4
Msa0210850 AT1G02220.1 41.667 132 70 5 15 144 1 127 1.09e-20 92.8
Msa0210850 AT3G10490.4 51.250 80 35 2 93 169 2 80 1.77e-20 91.7
Msa0210850 AT3G10490.3 51.250 80 35 2 93 169 2 80 1.77e-20 91.7
Msa0210850 AT5G50820.1 34.211 152 74 6 4 146 4 138 8.45e-19 83.6
Msa0210850 AT1G01010.1 35.065 154 85 7 20 164 6 153 8.20e-18 84.7
Msa0210850 AT5G14000.1 29.293 198 126 6 5 197 3 191 4.42e-17 79.3
Msa0210850 AT5G22290.2 37.864 103 59 2 99 201 2 99 4.34e-16 77.4
Msa0210850 AT3G56530.1 26.623 154 108 3 14 165 49 199 1.03e-14 74.3
Msa0210850 AT5G14000.2 29.932 147 95 3 13 157 11 151 4.12e-14 69.7
Msa0210850 AT3G04430.1 35.075 134 71 5 23 144 6 135 6.36e-12 64.3

Find 80 sgRNAs with CRISPR-Local

Find 226 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCCTCATTCCAATCCTTT+TGG 0.284680 2_1:-51236881 None:intergenic
TAACAGTTCCTCCAGGGTTT+AGG 0.294791 2_1:+51235911 Msa0210850:CDS
GAGCAACTACAGCTGGGTTT+TGG 0.302263 2_1:+51236818 Msa0210850:CDS
GGTGCAGCCTGGTGATTATT+AGG 0.325193 2_1:-51237620 None:intergenic
TTTGGAATTGGTGTGATATA+TGG 0.337061 2_1:-51236863 None:intergenic
CTTCTTCTTCAATTTCTTGT+TGG 0.338565 2_1:-51237199 None:intergenic
TGCATGTGATGATGATGTTT+TGG 0.354863 2_1:-51237278 None:intergenic
AACACCACCACCACCTTTGA+TGG 0.356402 2_1:+51237329 Msa0210850:CDS
ATGGAATGGATCTTAATCTA+AGG 0.360900 2_1:+51237579 Msa0210850:CDS
GGTACTGCTATAGCTGATTC+TGG 0.362952 2_1:-51237380 None:intergenic
CTATTTGTTCTTGTTCCTGT+TGG 0.367370 2_1:-51236796 None:intergenic
TGGTGGTGATTGGTCATTCT+TGG 0.375350 2_1:+51237535 Msa0210850:CDS
TATTTGTTCTTGTTCCTGTT+GGG 0.389319 2_1:-51236795 None:intergenic
TGATGATAATGCAGAAGTTC+AGG 0.405616 2_1:+51236981 Msa0210850:CDS
TTTGGTTCTAGAAAATGGTT+TGG 0.426326 2_1:-51237260 None:intergenic
ATCTCAACAGACTTGAGCCT+TGG 0.426871 2_1:+51236025 Msa0210850:CDS
GATAAGTGTAGGATTGGATC+AGG 0.432547 2_1:+51236727 Msa0210850:intron
GGATGTCCATTGATGAGTTA+TGG 0.436712 2_1:-51237415 None:intergenic
CTCATGGTCACAAAACTGAT+TGG 0.440810 2_1:+51236932 Msa0210850:CDS
TCACAACCAAGGTAATGAAA+TGG 0.449921 2_1:-51237680 None:intergenic
CACACCAATTCCAAAAGGAT+TGG 0.463232 2_1:+51236871 Msa0210850:CDS
GAAGTTCCAACAGCAGTAGA+AGG 0.470021 2_1:-51237641 None:intergenic
ACAAATAGAGCAACTACAGC+TGG 0.470753 2_1:+51236811 Msa0210850:CDS
AAATTTCCATTTCATTACCT+TGG 0.472448 2_1:+51237674 Msa0210850:CDS
GTTGCAGATAAGTGTAGGAT+TGG 0.472884 2_1:+51236721 Msa0210850:intron
TCTCAACAGACTTGAGCCTT+GGG 0.476536 2_1:+51236026 Msa0210850:CDS
TTCCTTCCATAACTCATCAA+TGG 0.495467 2_1:+51237409 Msa0210850:CDS
AAGATGGATGGGTAGTATGC+AGG 0.497034 2_1:+51237144 Msa0210850:CDS
TACAGAATGATGCAAGGTAG+TGG 0.509628 2_1:+51235883 Msa0210850:CDS
GCTGCACCTTCTACTGCTGT+TGG 0.514057 2_1:+51237635 Msa0210850:CDS
TCTGATAACATCAAGATCAA+TGG 0.515700 2_1:-51235995 None:intergenic
GATGAGTTATGGAAGGAAGT+TGG 0.517420 2_1:-51237404 None:intergenic
TAAAGAAGCTCCTCATCAGT+TGG 0.517483 2_1:-51235940 None:intergenic
CATCATCACATGCAACAACT+AGG 0.517757 2_1:+51237287 Msa0210850:CDS
GGTTGATCAGTGGTGGTGAT+TGG 0.522276 2_1:+51237525 Msa0210850:CDS
GGAGAATTAACAGTTCCTCC+AGG 0.530256 2_1:+51235904 Msa0210850:CDS
TATATCACACCAATTCCAAA+AGG 0.530691 2_1:+51236866 Msa0210850:CDS
ACAACAACAAATACTAGCTC+AGG 0.532614 2_1:+51237467 Msa0210850:CDS
AATGCTCTCAAAATTTGTTG+AGG 0.538669 2_1:+51237441 Msa0210850:CDS
AAAGAAGCTCCTCATCAGTT+GGG 0.540956 2_1:-51235939 None:intergenic
AAAACCTTAGTCTTCTACAC+TGG 0.541616 2_1:+51236901 Msa0210850:CDS
TACACTGGACGTGCTCCTCA+TGG 0.542939 2_1:+51236916 Msa0210850:CDS
GACCATTTGTTGATCTCATG+TGG 0.545405 2_1:-51237238 None:intergenic
AAGGACAAGAAATACCCAAC+AGG 0.548438 2_1:+51236781 Msa0210850:CDS
AGCAACAACAACAAGGAGAA+AGG 0.551906 2_1:+51237504 Msa0210850:CDS
AGATGGATGGGTAGTATGCA+GGG 0.553010 2_1:+51237145 Msa0210850:CDS
GAGAATTAACAGTTCCTCCA+GGG 0.560980 2_1:+51235905 Msa0210850:CDS
CAAGTGAATTGTACCATCAA+AGG 0.561403 2_1:-51237342 None:intergenic
AGCTTCTTTACTATTACTTG+AGG 0.562735 2_1:+51235953 Msa0210850:CDS
CAGCAGTAGAAGGTGCAGCC+TGG 0.565773 2_1:-51237631 None:intergenic
AACCACATGAGATCAACAAA+TGG 0.569176 2_1:+51237236 Msa0210850:CDS
TGTACCATCAAAGGTGGTGG+TGG 0.569923 2_1:-51237333 None:intergenic
ATTCCAAAAGGATTGGAATG+AGG 0.575697 2_1:+51236878 Msa0210850:CDS
ACTTGCATCACACAATGGAA+TGG 0.578666 2_1:+51237565 Msa0210850:CDS
ACGTCCAGTGTAGAAGACTA+AGG 0.581693 2_1:-51236905 None:intergenic
TGTGTACCTTTGAGATCCCA+AGG 0.590405 2_1:-51236042 None:intergenic
TAGGTTCCACCCAACTGATG+AGG 0.590857 2_1:+51235930 Msa0210850:CDS
CAAATAGAGCAACTACAGCT+GGG 0.601722 2_1:+51236812 Msa0210850:CDS
GTCCATTGATGAGTTATGGA+AGG 0.603236 2_1:-51237411 None:intergenic
GATCAGGGCCACAGAATGAG+TGG 0.613670 2_1:+51236743 Msa0210850:CDS
AAGAAATACCACTCATTCTG+TGG 0.620194 2_1:-51236751 None:intergenic
AAACTACTTGCATCACACAA+TGG 0.620814 2_1:+51237560 Msa0210850:CDS
CTCATGCAGCAACAACAACA+AGG 0.622496 2_1:+51237497 Msa0210850:CDS
CTTGAGCCTTGGGATCTCAA+AGG 0.623707 2_1:+51236036 Msa0210850:CDS
GATTCTGGACTGAACAATTG+TGG 0.624408 2_1:-51237365 None:intergenic
GGAGAAAGGTTGATCAGTGG+TGG 0.631877 2_1:+51237518 Msa0210850:CDS
GAAGCTCCTCATCAGTTGGG+TGG 0.635468 2_1:-51235936 None:intergenic
TAACACTCCTAATAATCACC+AGG 0.641336 2_1:+51237613 Msa0210850:CDS
CATTATCATCATCATCAAGA+CGG 0.647901 2_1:-51236969 None:intergenic
GAGTTATGGAAGGAAGTTGG+TGG 0.649529 2_1:-51237401 None:intergenic
GTGGTATTTCTTCAGTCACA+AGG 0.650969 2_1:+51236762 Msa0210850:CDS
GTTGGGTGGAACCTAAACCC+TGG 0.653580 2_1:-51235922 None:intergenic
AATTGTACCATCAAAGGTGG+TGG 0.659488 2_1:-51237336 None:intergenic
GTGAATTGTACCATCAAAGG+TGG 0.660490 2_1:-51237339 None:intergenic
TCTGTATACAGAATGATGCA+AGG 0.666488 2_1:+51235877 Msa0210850:CDS
CACTTGTTGCAGATAAGTGT+AGG 0.683334 2_1:+51236716 Msa0210850:intron
CAAGGAGAAAGGTTGATCAG+TGG 0.686081 2_1:+51237515 Msa0210850:CDS
ATAAGTGTAGGATTGGATCA+GGG 0.691336 2_1:+51236728 Msa0210850:CDS
TATCATGAGACTCACAACCA+AGG 0.694185 2_1:-51237691 None:intergenic
GGGTGGAACCTAAACCCTGG+AGG 0.757480 2_1:-51235919 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GTTTCATACTATATATATAT+AGG + chr2_1:51236212-51236231 Msa0210850:intron 15.0%
!! TAATATATGAACTAATACTA+TGG + chr2_1:51236276-51236295 Msa0210850:intron 15.0%
!! AATATATGTAATCTATCAAA+TGG + chr2_1:51237078-51237097 Msa0210850:intron 15.0%
!! GTTTCATACTATATATATAT+AGG + chr2_1:51236212-51236231 Msa0210850:intron 15.0%
!! TAATATATGAACTAATACTA+TGG + chr2_1:51236276-51236295 Msa0210850:intron 15.0%
!! AATATATGTAATCTATCAAA+TGG + chr2_1:51237078-51237097 Msa0210850:intron 15.0%
!! AGCAATATATTTAATAAGGT+TGG - chr2_1:51236327-51236346 None:intergenic 20.0%
!! GAGAAGCAATATATTTAATA+AGG - chr2_1:51236331-51236350 None:intergenic 20.0%
!!! GTGTTTTTAGTTTGTATTAA+TGG - chr2_1:51236433-51236452 None:intergenic 20.0%
!!! ATATCTTTTTCAAATCATTG+CGG - chr2_1:51236533-51236552 None:intergenic 20.0%
!! AGCAATATATTTAATAAGGT+TGG - chr2_1:51236327-51236346 None:intergenic 20.0%
!! GAGAAGCAATATATTTAATA+AGG - chr2_1:51236331-51236350 None:intergenic 20.0%
!!! GTGTTTTTAGTTTGTATTAA+TGG - chr2_1:51236433-51236452 None:intergenic 20.0%
!!! ATATCTTTTTCAAATCATTG+CGG - chr2_1:51236533-51236552 None:intergenic 20.0%
! TATACATGCTGAAATATGAT+TGG + chr2_1:51236369-51236388 Msa0210850:intron 25.0%
!! TATTAATGGATATGCATTGA+CGG - chr2_1:51236419-51236438 None:intergenic 25.0%
!!! ATCTCATGAATTTGTTTTTC+AGG + chr2_1:51237121-51237140 Msa0210850:intron 25.0%
! AAATTTCCATTTCATTACCT+TGG + chr2_1:51237674-51237693 Msa0210850:CDS 25.0%
! TATACATGCTGAAATATGAT+TGG + chr2_1:51236369-51236388 Msa0210850:intron 25.0%
!! TATTAATGGATATGCATTGA+CGG - chr2_1:51236419-51236438 None:intergenic 25.0%
!!! ATCTCATGAATTTGTTTTTC+AGG + chr2_1:51237121-51237140 Msa0210850:intron 25.0%
! AAATTTCCATTTCATTACCT+TGG + chr2_1:51237674-51237693 Msa0210850:CDS 25.0%
AGCTTCTTTACTATTACTTG+AGG + chr2_1:51235953-51235972 Msa0210850:CDS 30.0%
TCTGATAACATCAAGATCAA+TGG - chr2_1:51235998-51236017 None:intergenic 30.0%
TTGAATGTAATCACATGTGT+TGG + chr2_1:51236557-51236576 Msa0210850:intron 30.0%
AGAAAACTCAATATGTAGCA+GGG - chr2_1:51236629-51236648 None:intergenic 30.0%
TAGAAAACTCAATATGTAGC+AGG - chr2_1:51236630-51236649 None:intergenic 30.0%
TATTTGTTCTTGTTCCTGTT+GGG - chr2_1:51236798-51236817 None:intergenic 30.0%
! TTTGGAATTGGTGTGATATA+TGG - chr2_1:51236866-51236885 None:intergenic 30.0%
TATATCACACCAATTCCAAA+AGG + chr2_1:51236866-51236885 Msa0210850:CDS 30.0%
CATTATCATCATCATCAAGA+CGG - chr2_1:51236972-51236991 None:intergenic 30.0%
TCATGAGATGCTTAATTACT+TGG - chr2_1:51237110-51237129 None:intergenic 30.0%
!!! GAATTTGTTTTTCAGGAAGA+TGG + chr2_1:51237128-51237147 Msa0210850:intron 30.0%
CTTCTTCTTCAATTTCTTGT+TGG - chr2_1:51237202-51237221 None:intergenic 30.0%
!! TTTGGTTCTAGAAAATGGTT+TGG - chr2_1:51237263-51237282 None:intergenic 30.0%
!!! GATGTTTTGGTTCTAGAAAA+TGG - chr2_1:51237268-51237287 None:intergenic 30.0%
!!! ACAAATTTTGAGAGCATTCA+AGG - chr2_1:51237439-51237458 None:intergenic 30.0%
!! AATGCTCTCAAAATTTGTTG+AGG + chr2_1:51237441-51237460 Msa0210850:CDS 30.0%
ATGGAATGGATCTTAATCTA+AGG + chr2_1:51237579-51237598 Msa0210850:CDS 30.0%
AGCTTCTTTACTATTACTTG+AGG + chr2_1:51235953-51235972 Msa0210850:CDS 30.0%
TCTGATAACATCAAGATCAA+TGG - chr2_1:51235998-51236017 None:intergenic 30.0%
TTGAATGTAATCACATGTGT+TGG + chr2_1:51236557-51236576 Msa0210850:intron 30.0%
AGAAAACTCAATATGTAGCA+GGG - chr2_1:51236629-51236648 None:intergenic 30.0%
TAGAAAACTCAATATGTAGC+AGG - chr2_1:51236630-51236649 None:intergenic 30.0%
TATTTGTTCTTGTTCCTGTT+GGG - chr2_1:51236798-51236817 None:intergenic 30.0%
! TTTGGAATTGGTGTGATATA+TGG - chr2_1:51236866-51236885 None:intergenic 30.0%
TATATCACACCAATTCCAAA+AGG + chr2_1:51236866-51236885 Msa0210850:CDS 30.0%
CATTATCATCATCATCAAGA+CGG - chr2_1:51236972-51236991 None:intergenic 30.0%
TCATGAGATGCTTAATTACT+TGG - chr2_1:51237110-51237129 None:intergenic 30.0%
!!! GAATTTGTTTTTCAGGAAGA+TGG + chr2_1:51237128-51237147 Msa0210850:intron 30.0%
CTTCTTCTTCAATTTCTTGT+TGG - chr2_1:51237202-51237221 None:intergenic 30.0%
!! TTTGGTTCTAGAAAATGGTT+TGG - chr2_1:51237263-51237282 None:intergenic 30.0%
!!! GATGTTTTGGTTCTAGAAAA+TGG - chr2_1:51237268-51237287 None:intergenic 30.0%
!!! ACAAATTTTGAGAGCATTCA+AGG - chr2_1:51237439-51237458 None:intergenic 30.0%
!! AATGCTCTCAAAATTTGTTG+AGG + chr2_1:51237441-51237460 Msa0210850:CDS 30.0%
ATGGAATGGATCTTAATCTA+AGG + chr2_1:51237579-51237598 Msa0210850:CDS 30.0%
TCTGTATACAGAATGATGCA+AGG + chr2_1:51235877-51235896 Msa0210850:CDS 35.0%
ACCACTTAAAACTAGCTAGT+TGG + chr2_1:51236120-51236139 Msa0210850:intron 35.0%
!!! ACCAACTAGCTAGTTTTAAG+TGG - chr2_1:51236124-51236143 None:intergenic 35.0%
GCGCATAAGTAAGATATGAT+TGG - chr2_1:51236305-51236324 None:intergenic 35.0%
!!! CACATGTGTTGGTTTTATCT+CGG + chr2_1:51236568-51236587 Msa0210850:intron 35.0%
CTTAAGATTGAAGACATGTC+TGG - chr2_1:51236603-51236622 None:intergenic 35.0%
ATAAGTGTAGGATTGGATCA+GGG + chr2_1:51236728-51236747 Msa0210850:CDS 35.0%
AAGAAATACCACTCATTCTG+TGG - chr2_1:51236754-51236773 None:intergenic 35.0%
CTATTTGTTCTTGTTCCTGT+TGG - chr2_1:51236799-51236818 None:intergenic 35.0%
!!! CATTCCAATCCTTTTGGAAT+TGG - chr2_1:51236878-51236897 None:intergenic 35.0%
ATTCCAAAAGGATTGGAATG+AGG + chr2_1:51236878-51236897 Msa0210850:CDS 35.0%
! TTTCCTCATTCCAATCCTTT+TGG - chr2_1:51236884-51236903 None:intergenic 35.0%
! AAAACCTTAGTCTTCTACAC+TGG + chr2_1:51236901-51236920 Msa0210850:CDS 35.0%
! TGATGATAATGCAGAAGTTC+AGG + chr2_1:51236981-51237000 Msa0210850:CDS 35.0%
!!! TTGTTTTTCAGGAAGATGGA+TGG + chr2_1:51237132-51237151 Msa0210850:intron 35.0%
!!! TGTTTTTCAGGAAGATGGAT+GGG + chr2_1:51237133-51237152 Msa0210850:intron 35.0%
AACCACATGAGATCAACAAA+TGG + chr2_1:51237236-51237255 Msa0210850:CDS 35.0%
!! TGCATGTGATGATGATGTTT+TGG - chr2_1:51237281-51237300 None:intergenic 35.0%
CAAGTGAATTGTACCATCAA+AGG - chr2_1:51237345-51237364 None:intergenic 35.0%
TTCCTTCCATAACTCATCAA+TGG + chr2_1:51237409-51237428 Msa0210850:CDS 35.0%
ACAACAACAAATACTAGCTC+AGG + chr2_1:51237467-51237486 Msa0210850:CDS 35.0%
AAACTACTTGCATCACACAA+TGG + chr2_1:51237560-51237579 Msa0210850:CDS 35.0%
TAACACTCCTAATAATCACC+AGG + chr2_1:51237613-51237632 Msa0210850:CDS 35.0%
TCACAACCAAGGTAATGAAA+TGG - chr2_1:51237683-51237702 None:intergenic 35.0%
TCTGTATACAGAATGATGCA+AGG + chr2_1:51235877-51235896 Msa0210850:CDS 35.0%
ACCACTTAAAACTAGCTAGT+TGG + chr2_1:51236120-51236139 Msa0210850:intron 35.0%
!!! ACCAACTAGCTAGTTTTAAG+TGG - chr2_1:51236124-51236143 None:intergenic 35.0%
GCGCATAAGTAAGATATGAT+TGG - chr2_1:51236305-51236324 None:intergenic 35.0%
!!! CACATGTGTTGGTTTTATCT+CGG + chr2_1:51236568-51236587 Msa0210850:intron 35.0%
CTTAAGATTGAAGACATGTC+TGG - chr2_1:51236603-51236622 None:intergenic 35.0%
ATAAGTGTAGGATTGGATCA+GGG + chr2_1:51236728-51236747 Msa0210850:CDS 35.0%
AAGAAATACCACTCATTCTG+TGG - chr2_1:51236754-51236773 None:intergenic 35.0%
CTATTTGTTCTTGTTCCTGT+TGG - chr2_1:51236799-51236818 None:intergenic 35.0%
!!! CATTCCAATCCTTTTGGAAT+TGG - chr2_1:51236878-51236897 None:intergenic 35.0%
ATTCCAAAAGGATTGGAATG+AGG + chr2_1:51236878-51236897 Msa0210850:CDS 35.0%
! TTTCCTCATTCCAATCCTTT+TGG - chr2_1:51236884-51236903 None:intergenic 35.0%
! AAAACCTTAGTCTTCTACAC+TGG + chr2_1:51236901-51236920 Msa0210850:CDS 35.0%
! TGATGATAATGCAGAAGTTC+AGG + chr2_1:51236981-51237000 Msa0210850:CDS 35.0%
!!! TTGTTTTTCAGGAAGATGGA+TGG + chr2_1:51237132-51237151 Msa0210850:intron 35.0%
!!! TGTTTTTCAGGAAGATGGAT+GGG + chr2_1:51237133-51237152 Msa0210850:intron 35.0%
AACCACATGAGATCAACAAA+TGG + chr2_1:51237236-51237255 Msa0210850:CDS 35.0%
!! TGCATGTGATGATGATGTTT+TGG - chr2_1:51237281-51237300 None:intergenic 35.0%
CAAGTGAATTGTACCATCAA+AGG - chr2_1:51237345-51237364 None:intergenic 35.0%
TTCCTTCCATAACTCATCAA+TGG + chr2_1:51237409-51237428 Msa0210850:CDS 35.0%
ACAACAACAAATACTAGCTC+AGG + chr2_1:51237467-51237486 Msa0210850:CDS 35.0%
AAACTACTTGCATCACACAA+TGG + chr2_1:51237560-51237579 Msa0210850:CDS 35.0%
TAACACTCCTAATAATCACC+AGG + chr2_1:51237613-51237632 Msa0210850:CDS 35.0%
TCACAACCAAGGTAATGAAA+TGG - chr2_1:51237683-51237702 None:intergenic 35.0%
TACAGAATGATGCAAGGTAG+TGG + chr2_1:51235883-51235902 Msa0210850:CDS 40.0%
GAGAATTAACAGTTCCTCCA+GGG + chr2_1:51235905-51235924 Msa0210850:CDS 40.0%
AAAGAAGCTCCTCATCAGTT+GGG - chr2_1:51235942-51235961 None:intergenic 40.0%
TAAAGAAGCTCCTCATCAGT+TGG - chr2_1:51235943-51235962 None:intergenic 40.0%
TGTCAGTGCAAGTGTTTCAT+AGG - chr2_1:51236483-51236502 None:intergenic 40.0%
TTGCGGATATCAACGTATCA+GGG - chr2_1:51236516-51236535 None:intergenic 40.0%
ATTGCGGATATCAACGTATC+AGG - chr2_1:51236517-51236536 None:intergenic 40.0%
!!! TGTTGGTTTTATCTCGGTGT+CGG + chr2_1:51236574-51236593 Msa0210850:intron 40.0%
! CACTTGTTGCAGATAAGTGT+AGG + chr2_1:51236716-51236735 Msa0210850:intron 40.0%
GTTGCAGATAAGTGTAGGAT+TGG + chr2_1:51236721-51236740 Msa0210850:intron 40.0%
GATAAGTGTAGGATTGGATC+AGG + chr2_1:51236727-51236746 Msa0210850:intron 40.0%
GTGGTATTTCTTCAGTCACA+AGG + chr2_1:51236762-51236781 Msa0210850:CDS 40.0%
AAGGACAAGAAATACCCAAC+AGG + chr2_1:51236781-51236800 Msa0210850:CDS 40.0%
ACAAATAGAGCAACTACAGC+TGG + chr2_1:51236811-51236830 Msa0210850:CDS 40.0%
CAAATAGAGCAACTACAGCT+GGG + chr2_1:51236812-51236831 Msa0210850:CDS 40.0%
CACACCAATTCCAAAAGGAT+TGG + chr2_1:51236871-51236890 Msa0210850:CDS 40.0%
!! CAATCAGTTTTGTGACCATG+AGG - chr2_1:51236934-51236953 None:intergenic 40.0%
CTCATGGTCACAAAACTGAT+TGG + chr2_1:51236932-51236951 Msa0210850:CDS 40.0%
! GACCATTTGTTGATCTCATG+TGG - chr2_1:51237241-51237260 None:intergenic 40.0%
CATCATCACATGCAACAACT+AGG + chr2_1:51237287-51237306 Msa0210850:CDS 40.0%
AATTGTACCATCAAAGGTGG+TGG - chr2_1:51237339-51237358 None:intergenic 40.0%
GTGAATTGTACCATCAAAGG+TGG - chr2_1:51237342-51237361 None:intergenic 40.0%
GATTCTGGACTGAACAATTG+TGG - chr2_1:51237368-51237387 None:intergenic 40.0%
GATGAGTTATGGAAGGAAGT+TGG - chr2_1:51237407-51237426 None:intergenic 40.0%
GTCCATTGATGAGTTATGGA+AGG - chr2_1:51237414-51237433 None:intergenic 40.0%
GGATGTCCATTGATGAGTTA+TGG - chr2_1:51237418-51237437 None:intergenic 40.0%
AGCAACAACAACAAGGAGAA+AGG + chr2_1:51237504-51237523 Msa0210850:CDS 40.0%
ACTTGCATCACACAATGGAA+TGG + chr2_1:51237565-51237584 Msa0210850:CDS 40.0%
TATCATGAGACTCACAACCA+AGG - chr2_1:51237694-51237713 None:intergenic 40.0%
TACAGAATGATGCAAGGTAG+TGG + chr2_1:51235883-51235902 Msa0210850:CDS 40.0%
GAGAATTAACAGTTCCTCCA+GGG + chr2_1:51235905-51235924 Msa0210850:CDS 40.0%
AAAGAAGCTCCTCATCAGTT+GGG - chr2_1:51235942-51235961 None:intergenic 40.0%
TAAAGAAGCTCCTCATCAGT+TGG - chr2_1:51235943-51235962 None:intergenic 40.0%
TGTCAGTGCAAGTGTTTCAT+AGG - chr2_1:51236483-51236502 None:intergenic 40.0%
TTGCGGATATCAACGTATCA+GGG - chr2_1:51236516-51236535 None:intergenic 40.0%
ATTGCGGATATCAACGTATC+AGG - chr2_1:51236517-51236536 None:intergenic 40.0%
!!! TGTTGGTTTTATCTCGGTGT+CGG + chr2_1:51236574-51236593 Msa0210850:intron 40.0%
! CACTTGTTGCAGATAAGTGT+AGG + chr2_1:51236716-51236735 Msa0210850:intron 40.0%
GTTGCAGATAAGTGTAGGAT+TGG + chr2_1:51236721-51236740 Msa0210850:intron 40.0%
GATAAGTGTAGGATTGGATC+AGG + chr2_1:51236727-51236746 Msa0210850:intron 40.0%
GTGGTATTTCTTCAGTCACA+AGG + chr2_1:51236762-51236781 Msa0210850:CDS 40.0%
AAGGACAAGAAATACCCAAC+AGG + chr2_1:51236781-51236800 Msa0210850:CDS 40.0%
ACAAATAGAGCAACTACAGC+TGG + chr2_1:51236811-51236830 Msa0210850:CDS 40.0%
CAAATAGAGCAACTACAGCT+GGG + chr2_1:51236812-51236831 Msa0210850:CDS 40.0%
CACACCAATTCCAAAAGGAT+TGG + chr2_1:51236871-51236890 Msa0210850:CDS 40.0%
!! CAATCAGTTTTGTGACCATG+AGG - chr2_1:51236934-51236953 None:intergenic 40.0%
CTCATGGTCACAAAACTGAT+TGG + chr2_1:51236932-51236951 Msa0210850:CDS 40.0%
! GACCATTTGTTGATCTCATG+TGG - chr2_1:51237241-51237260 None:intergenic 40.0%
CATCATCACATGCAACAACT+AGG + chr2_1:51237287-51237306 Msa0210850:CDS 40.0%
AATTGTACCATCAAAGGTGG+TGG - chr2_1:51237339-51237358 None:intergenic 40.0%
GTGAATTGTACCATCAAAGG+TGG - chr2_1:51237342-51237361 None:intergenic 40.0%
GATTCTGGACTGAACAATTG+TGG - chr2_1:51237368-51237387 None:intergenic 40.0%
GATGAGTTATGGAAGGAAGT+TGG - chr2_1:51237407-51237426 None:intergenic 40.0%
GTCCATTGATGAGTTATGGA+AGG - chr2_1:51237414-51237433 None:intergenic 40.0%
GGATGTCCATTGATGAGTTA+TGG - chr2_1:51237418-51237437 None:intergenic 40.0%
AGCAACAACAACAAGGAGAA+AGG + chr2_1:51237504-51237523 Msa0210850:CDS 40.0%
ACTTGCATCACACAATGGAA+TGG + chr2_1:51237565-51237584 Msa0210850:CDS 40.0%
TATCATGAGACTCACAACCA+AGG - chr2_1:51237694-51237713 None:intergenic 40.0%
GGAGAATTAACAGTTCCTCC+AGG + chr2_1:51235904-51235923 Msa0210850:CDS 45.0%
TAACAGTTCCTCCAGGGTTT+AGG + chr2_1:51235911-51235930 Msa0210850:CDS 45.0%
ATCTCAACAGACTTGAGCCT+TGG + chr2_1:51236025-51236044 Msa0210850:CDS 45.0%
TCTCAACAGACTTGAGCCTT+GGG + chr2_1:51236026-51236045 Msa0210850:CDS 45.0%
!! TGTGTACCTTTGAGATCCCA+AGG - chr2_1:51236045-51236064 None:intergenic 45.0%
CAACGTATCAGGGTCATGTT+CGG - chr2_1:51236506-51236525 None:intergenic 45.0%
ACGTCCAGTGTAGAAGACTA+AGG - chr2_1:51236908-51236927 None:intergenic 45.0%
TGTGACATGCACTACAAGTG+TGG - chr2_1:51237020-51237039 None:intergenic 45.0%
AAGATGGATGGGTAGTATGC+AGG + chr2_1:51237144-51237163 Msa0210850:CDS 45.0%
AGATGGATGGGTAGTATGCA+GGG + chr2_1:51237145-51237164 Msa0210850:CDS 45.0%
! GGTACTGCTATAGCTGATTC+TGG - chr2_1:51237383-51237402 None:intergenic 45.0%
GAGTTATGGAAGGAAGTTGG+TGG - chr2_1:51237404-51237423 None:intergenic 45.0%
CTCATGCAGCAACAACAACA+AGG + chr2_1:51237497-51237516 Msa0210850:CDS 45.0%
! CAAGGAGAAAGGTTGATCAG+TGG + chr2_1:51237515-51237534 Msa0210850:CDS 45.0%
! TGGTGGTGATTGGTCATTCT+TGG + chr2_1:51237535-51237554 Msa0210850:CDS 45.0%
GAAGTTCCAACAGCAGTAGA+AGG - chr2_1:51237644-51237663 None:intergenic 45.0%
GGAGAATTAACAGTTCCTCC+AGG + chr2_1:51235904-51235923 Msa0210850:CDS 45.0%
TAACAGTTCCTCCAGGGTTT+AGG + chr2_1:51235911-51235930 Msa0210850:CDS 45.0%
ATCTCAACAGACTTGAGCCT+TGG + chr2_1:51236025-51236044 Msa0210850:CDS 45.0%
TCTCAACAGACTTGAGCCTT+GGG + chr2_1:51236026-51236045 Msa0210850:CDS 45.0%
!! TGTGTACCTTTGAGATCCCA+AGG - chr2_1:51236045-51236064 None:intergenic 45.0%
CAACGTATCAGGGTCATGTT+CGG - chr2_1:51236506-51236525 None:intergenic 45.0%
ACGTCCAGTGTAGAAGACTA+AGG - chr2_1:51236908-51236927 None:intergenic 45.0%
TGTGACATGCACTACAAGTG+TGG - chr2_1:51237020-51237039 None:intergenic 45.0%
AAGATGGATGGGTAGTATGC+AGG + chr2_1:51237144-51237163 Msa0210850:CDS 45.0%
AGATGGATGGGTAGTATGCA+GGG + chr2_1:51237145-51237164 Msa0210850:CDS 45.0%
! GGTACTGCTATAGCTGATTC+TGG - chr2_1:51237383-51237402 None:intergenic 45.0%
GAGTTATGGAAGGAAGTTGG+TGG - chr2_1:51237404-51237423 None:intergenic 45.0%
CTCATGCAGCAACAACAACA+AGG + chr2_1:51237497-51237516 Msa0210850:CDS 45.0%
! CAAGGAGAAAGGTTGATCAG+TGG + chr2_1:51237515-51237534 Msa0210850:CDS 45.0%
! TGGTGGTGATTGGTCATTCT+TGG + chr2_1:51237535-51237554 Msa0210850:CDS 45.0%
GAAGTTCCAACAGCAGTAGA+AGG - chr2_1:51237644-51237663 None:intergenic 45.0%
TAGGTTCCACCCAACTGATG+AGG + chr2_1:51235930-51235949 Msa0210850:CDS 50.0%
CTTGAGCCTTGGGATCTCAA+AGG + chr2_1:51236036-51236055 Msa0210850:CDS 50.0%
! GAGCAACTACAGCTGGGTTT+TGG + chr2_1:51236818-51236837 Msa0210850:CDS 50.0%
!!! GCTGGGTTTTGGAAAGCAAC+AGG + chr2_1:51236829-51236848 Msa0210850:CDS 50.0%
AACACCACCACCACCTTTGA+TGG + chr2_1:51237329-51237348 Msa0210850:CDS 50.0%
! TGTACCATCAAAGGTGGTGG+TGG - chr2_1:51237336-51237355 None:intergenic 50.0%
! GGAGAAAGGTTGATCAGTGG+TGG + chr2_1:51237518-51237537 Msa0210850:CDS 50.0%
! GGTTGATCAGTGGTGGTGAT+TGG + chr2_1:51237525-51237544 Msa0210850:CDS 50.0%
GGTGCAGCCTGGTGATTATT+AGG - chr2_1:51237623-51237642 None:intergenic 50.0%
TAGGTTCCACCCAACTGATG+AGG + chr2_1:51235930-51235949 Msa0210850:CDS 50.0%
CTTGAGCCTTGGGATCTCAA+AGG + chr2_1:51236036-51236055 Msa0210850:CDS 50.0%
! GAGCAACTACAGCTGGGTTT+TGG + chr2_1:51236818-51236837 Msa0210850:CDS 50.0%
!!! GCTGGGTTTTGGAAAGCAAC+AGG + chr2_1:51236829-51236848 Msa0210850:CDS 50.0%
AACACCACCACCACCTTTGA+TGG + chr2_1:51237329-51237348 Msa0210850:CDS 50.0%
! TGTACCATCAAAGGTGGTGG+TGG - chr2_1:51237336-51237355 None:intergenic 50.0%
! GGAGAAAGGTTGATCAGTGG+TGG + chr2_1:51237518-51237537 Msa0210850:CDS 50.0%
! GGTTGATCAGTGGTGGTGAT+TGG + chr2_1:51237525-51237544 Msa0210850:CDS 50.0%
GGTGCAGCCTGGTGATTATT+AGG - chr2_1:51237623-51237642 None:intergenic 50.0%
GTTGGGTGGAACCTAAACCC+TGG - chr2_1:51235925-51235944 None:intergenic 55.0%
GAAGCTCCTCATCAGTTGGG+TGG - chr2_1:51235939-51235958 None:intergenic 55.0%
GATCAGGGCCACAGAATGAG+TGG + chr2_1:51236743-51236762 Msa0210850:CDS 55.0%
TACACTGGACGTGCTCCTCA+TGG + chr2_1:51236916-51236935 Msa0210850:CDS 55.0%
GCTGCACCTTCTACTGCTGT+TGG + chr2_1:51237635-51237654 Msa0210850:CDS 55.0%
GTTGGGTGGAACCTAAACCC+TGG - chr2_1:51235925-51235944 None:intergenic 55.0%
GAAGCTCCTCATCAGTTGGG+TGG - chr2_1:51235939-51235958 None:intergenic 55.0%
GATCAGGGCCACAGAATGAG+TGG + chr2_1:51236743-51236762 Msa0210850:CDS 55.0%
TACACTGGACGTGCTCCTCA+TGG + chr2_1:51236916-51236935 Msa0210850:CDS 55.0%
GCTGCACCTTCTACTGCTGT+TGG + chr2_1:51237635-51237654 Msa0210850:CDS 55.0%
GGGTGGAACCTAAACCCTGG+AGG - chr2_1:51235922-51235941 None:intergenic 60.0%
! CAGCAGTAGAAGGTGCAGCC+TGG - chr2_1:51237634-51237653 None:intergenic 60.0%
GGGTGGAACCTAAACCCTGG+AGG - chr2_1:51235922-51235941 None:intergenic 60.0%
! CAGCAGTAGAAGGTGCAGCC+TGG - chr2_1:51237634-51237653 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 51235868 51237733 51235868 ID=Msa0210850;Name=Msa0210850
chr2_1 mRNA 51235868 51237733 51235868 ID=Msa0210850-mRNA-1;Parent=Msa0210850;Name=Msa0210850-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0|0|1|1|1|3|0|351
chr2_1 exon 51235868 51236057 51235868 ID=Msa0210850-mRNA-1:exon:14228;Parent=Msa0210850-mRNA-1
chr2_1 exon 51236728 51237002 51236728 ID=Msa0210850-mRNA-1:exon:14229;Parent=Msa0210850-mRNA-1
chr2_1 exon 51237143 51237733 51237143 ID=Msa0210850-mRNA-1:exon:14230;Parent=Msa0210850-mRNA-1
chr2_1 CDS 51235868 51236057 51235868 ID=Msa0210850-mRNA-1:cds;Parent=Msa0210850-mRNA-1
chr2_1 CDS 51236728 51237002 51236728 ID=Msa0210850-mRNA-1:cds;Parent=Msa0210850-mRNA-1
chr2_1 CDS 51237143 51237733 51237143 ID=Msa0210850-mRNA-1:cds;Parent=Msa0210850-mRNA-1
Gene Sequence

>Msa0210850

AATAAGGAATCTGTATACAGAATGATGCAAGGTAGTGGAGAATTAACAGTTCCTCCAGGGTTTAGGTTCCACCCAACTGATGAGGAGCTTCTTTACTATTACTTGAGGAAGAAAGTTTCTTATGAAGCCATTGATCTTGATGTTATCAGAGAAGTTGATCTCAACAGACTTGAGCCTTGGGATCTCAAAGATAAGTGTAGGATTGGATCAGGGCCACAGAATGAGTGGTATTTCTTCAGTCACAAGGACAAGAAATACCCAACAGGAACAAGAACAAATAGAGCAACTACAGCTGGGTTTTGGAAAGCAACAGGAAGAGACAAAGCCATATATCACACCAATTCCAAAAGGATTGGAATGAGGAAAACCTTAGTCTTCTACACTGGACGTGCTCCTCATGGTCACAAAACTGATTGGATTATGCATGAGTACCGTCTTGATGATGATGATAATGCAGAAGTTCAGGAAGATGGATGGGTAGTATGCAGGGTATTCAAAAAGAAAAACACAAACAGAAGCTACCAACAAGAAATTGAAGAAGAAGATCATCACATGATTAACCACATGAGATCAACAAATGGTCCAAACCATTTTCTAGAACCAAAACATCATCATCACATGCAACAACTAGGACTATATGATTACAACAATAACACCACCACCACCTTTGATGGTACAATTCACTTGCCACAATTGTTCAGTCCAGAATCAGCTATAGCAGTACCACCAACTTCCTTCCATAACTCATCAATGGACATCCTTGAATGCTCTCAAAATTTGTTGAGGCTCACAACAACAAATACTAGCTCAGGACTTAATCTCATGCAGCAACAACAACAAGGAGAAAGGTTGATCAGTGGTGGTGATTGGTCATTCTTGGATAAACTACTTGCATCACACAATGGAATGGATCTTAATCTAAGGAACAAATTATGTAACACTCCTAATAATCACCAGGCTGCACCTTCTACTGCTGTTGGAACTTCTTCAGCTCAGAAATTTCCATTTCATTACCTTGGTTGTGAGTCTCATGATATTATGAAATTTTCAAAGTAA

Protein sequence

>Msa0210850

NKESVYRMMQGSGELTVPPGFRFHPTDEELLYYYLRKKVSYEAIDLDVIREVDLNRLEPWDLKDKCRIGSGPQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIYHTNSKRIGMRKTLVFYTGRAPHGHKTDWIMHEYRLDDDDNAEVQEDGWVVCRVFKKKNTNRSYQQEIEEEDHHMINHMRSTNGPNHFLEPKHHHHMQQLGLYDYNNNTTTTFDGTIHLPQLFSPESAIAVPPTSFHNSSMDILECSQNLLRLTTTNTSSGLNLMQQQQQGERLISGGDWSFLDKLLASHNGMDLNLRNKLCNTPNNHQAAPSTAVGTSSAQKFPFHYLGCESHDIMKFSK*