AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0576790

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0576790 MtrunA17_Chr8g0385411 98.330 898 15 0 1 898 1 898 0.0 1857
Msa0576790 MtrunA17_Chr3g0131401 71.569 918 227 9 9 898 12 923 0.0 1377
Msa0576790 MtrunA17_Chr1g0192121 61.512 860 306 8 42 898 48 885 0.0 1109
Msa0576790 MtrunA17_Chr3g0131381 61.926 893 304 10 35 898 32 917 0.0 1103
Msa0576790 MtrunA17_Chr7g0272591 61.778 866 292 12 42 898 60 895 0.0 1084
Msa0576790 MtrunA17_Chr3g0131361 57.174 920 338 17 14 898 12 910 0.0 1039
Msa0576790 MtrunA17_Chr8g0387591 58.407 791 307 10 122 898 162 944 0.0 947
Msa0576790 MtrunA17_Chr2g0301511 47.624 905 409 16 38 898 48 931 0.0 829
Msa0576790 MtrunA17_Chr7g0238371 48.808 797 375 13 122 898 68 851 0.0 776
Msa0576790 MtrunA17_Chr4g0061441 44.416 779 385 12 131 898 89 830 0.0 682
Msa0576790 MtrunA17_Chr2g0291481 27.602 221 122 5 520 732 293 483 1.62e-19 94.0
Msa0576790 MtrunA17_Chr1g0202731 26.724 232 131 6 508 737 262 456 1.63e-19 94.0
Msa0576790 MtrunA17_Chr1g0202741 27.155 232 130 6 508 737 257 451 1.39e-18 90.9
Msa0576790 MtrunA17_Chr4g0058571 27.014 211 123 6 520 727 280 462 2.36e-17 87.0
Msa0576790 MtrunA17_Chr8g0348531 26.638 229 112 5 513 728 274 459 1.45e-16 84.7
Msa0576790 MtrunA17_Chr8g0348521 28.182 220 119 7 520 733 268 454 1.70e-16 84.3
Msa0576790 MtrunA17_Chr8g0349071 27.358 212 118 6 520 728 37 215 1.81e-16 81.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0576790 AT5G51060.1 63.584 876 295 10 35 898 42 905 0.0 1147
Msa0576790 AT5G47910.1 60.135 888 332 8 19 898 48 921 0.0 1105
Msa0576790 AT5G07390.1 60.046 866 332 9 43 898 41 902 0.0 1055
Msa0576790 AT4G25090.1 57.978 821 314 9 94 898 44 849 0.0 1003
Msa0576790 AT4G25090.2 57.966 816 310 9 94 898 44 837 0.0 994
Msa0576790 AT1G09090.2 55.041 863 332 14 44 898 29 843 0.0 971
Msa0576790 AT5G07390.2 56.413 842 303 12 43 865 41 837 0.0 933
Msa0576790 AT1G64060.1 52.355 913 369 14 44 898 40 944 0.0 920
Msa0576790 AT1G19230.2 48.541 857 376 13 86 898 117 952 0.0 804
Msa0576790 AT4G11230.1 51.810 801 346 13 122 898 157 941 0.0 797
Msa0576790 AT1G19230.1 48.645 849 361 13 86 898 117 926 0.0 795
Msa0576790 AT5G60010.1 47.428 797 395 11 121 898 95 886 0.0 750
Msa0576790 AT3G45810.1 44.406 858 427 14 80 898 66 912 0.0 722
Msa0576790 AT1G09090.1 53.440 625 247 10 44 660 29 617 0.0 678
Msa0576790 AT5G49740.1 30.222 225 124 7 520 739 291 487 2.48e-21 100
Msa0576790 AT5G49740.2 30.222 225 124 7 520 739 291 487 3.61e-21 99.0
Msa0576790 AT5G49730.1 29.464 224 127 6 520 739 282 478 3.69e-21 99.8
Msa0576790 AT5G49740.3 30.222 225 124 7 520 739 291 487 3.77e-21 99.8
Msa0576790 AT5G49730.2 29.464 224 127 6 520 739 282 478 6.57e-21 98.2
Msa0576790 AT5G50160.2 28.194 227 125 7 508 729 74 267 2.91e-20 96.3
Msa0576790 AT5G50160.1 28.194 227 125 7 508 729 253 446 9.75e-20 95.1
Msa0576790 AT5G23990.1 27.236 246 128 7 486 728 196 393 1.55e-19 94.4
Msa0576790 AT1G01580.2 25.100 251 143 7 481 728 334 542 2.18e-19 94.4
Msa0576790 AT5G23990.3 27.236 246 128 7 486 728 106 303 2.43e-19 93.2
Msa0576790 AT1G01580.1 25.100 251 143 7 481 728 256 464 2.81e-19 93.6
Msa0576790 AT5G23990.2 27.236 246 128 7 486 728 238 435 7.06e-19 92.4
Msa0576790 AT1G01590.1 28.761 226 119 7 508 727 267 456 7.71e-18 89.0
Msa0576790 AT5G23980.1 26.636 214 119 5 520 730 259 437 8.70e-18 89.0
Msa0576790 AT1G23020.2 26.415 212 120 6 520 728 300 478 7.61e-16 82.8
Msa0576790 AT1G23020.1 26.415 212 120 6 520 728 299 477 8.21e-16 82.4
Msa0576790 AT1G23020.5 26.415 212 120 6 520 728 299 477 8.21e-16 82.4
Msa0576790 AT1G23020.4 26.415 212 120 6 520 728 276 454 1.01e-15 82.4
Msa0576790 AT1G23020.3 26.415 212 120 6 520 728 276 454 1.01e-15 82.4
Msa0576790 AT1G23020.7 26.415 212 120 6 520 728 273 451 1.02e-15 82.0
Msa0576790 AT1G23020.6 26.415 212 120 6 520 728 277 455 1.07e-15 82.0

Find 283 sgRNAs with CRISPR-Local

Find 457 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATATTCCTCTGCTTGTTTC+TGG 0.062576 4_1:-80856608 None:intergenic
CCTATATTGCACAAATTTAA+AGG 0.091637 4_1:-80856997 None:intergenic
CACTGAACCTAGAGTCTTTC+TGG 0.129040 4_1:-80860408 None:intergenic
TAAATTTAATTAATTATTAA+AGG 0.166907 4_1:+80861367 Msa0576790:three_prime_UTR
AATATTCACCTGTGAGAATT+TGG 0.174604 4_1:-80858440 None:intergenic
CCTACCTCACCTTTAGTATT+TGG 0.192695 4_1:-80861308 None:intergenic
TTACTTGTGGGGCTGGGAAT+AGG 0.193778 4_1:+80860280 Msa0576790:CDS
TTCTTTATGAAAGTCGAATT+TGG 0.208661 4_1:-80861076 None:intergenic
TCCTTCCAGGTCCCTTCTCC+TGG 0.232557 4_1:-80861454 None:intergenic
CTGCATCTTCTTCTTTGTTA+TGG 0.247298 4_1:-80855455 None:intergenic
CTCCTGATTTACTTCCTTCC+AGG 0.249204 4_1:-80861467 None:intergenic
GGTTCCTTTGATTGGTTTAA+AGG 0.256130 4_1:+80860478 Msa0576790:CDS
TACTTGTGGGGCTGGGAATA+GGG 0.260252 4_1:+80860281 Msa0576790:CDS
TCTCCCCTTGTAGTTTCTTC+TGG 0.260472 4_1:-80856813 None:intergenic
ATGTAGCTGAGGAGGATAGA+AGG 0.282067 4_1:+80860512 Msa0576790:CDS
AAGTCTCTCCAATGCATAAA+TGG 0.282846 4_1:-80857883 None:intergenic
CTTAACTTTGTGCTGTTCTC+AGG 0.284518 4_1:-80855399 None:intergenic
CTGACCAAAGCTTTGATACT+AGG 0.290247 4_1:+80856218 Msa0576790:CDS
GGGGCAGAAGTTATGGAAAA+TGG 0.292500 4_1:-80858355 None:intergenic
TCTCTATACCACCTCTTAAT+AGG 0.293175 4_1:-80856894 None:intergenic
GGACCATCGATCAAAACTTT+AGG 0.293437 4_1:-80860214 None:intergenic
AGATCCAGTTTAGGGAGTTC+TGG 0.296332 4_1:+80856185 Msa0576790:CDS
CAAATGTAGGCCTAAGCTTT+TGG 0.296685 4_1:-80856863 None:intergenic
GCACAAATTTAAAGGCAAAT+AGG 0.296907 4_1:-80856989 None:intergenic
CCTTTAAATTTGTGCAATAT+AGG 0.299547 4_1:+80856997 Msa0576790:CDS
GTTGAAGGGTTTAGGTAGTT+TGG 0.307613 4_1:-80857621 None:intergenic
TAAGGTAAACGTGGGGTAAA+TGG 0.315225 4_1:+80861266 Msa0576790:three_prime_UTR
CTGTGGATTGGTGCCATGTT+AGG 0.320631 4_1:+80856966 Msa0576790:CDS
CCAGGAGGGCATACTTCTAT+TGG 0.329337 4_1:+80860440 Msa0576790:CDS
CACTAAGGTAATCATCATTA+GGG 0.333409 4_1:-80858375 None:intergenic
ACACTAAGGTAATCATCATT+AGG 0.335474 4_1:-80858376 None:intergenic
CGATCAACAAGATCCAGTTT+AGG 0.338665 4_1:+80856176 Msa0576790:CDS
TTCCTTAGTCAAGTAAAGTT+TGG 0.338913 4_1:-80857723 None:intergenic
GTTCCTTTGATTGGTTTAAA+GGG 0.340740 4_1:+80860479 Msa0576790:CDS
ATATTAAAATACTTGGTGAT+TGG 0.341745 4_1:+80858401 Msa0576790:CDS
CCTTTAGTATACTTATCATT+GGG 0.342963 4_1:-80860309 None:intergenic
GCTGACGAAGCTCGTGGGTC+AGG 0.343775 4_1:-80861023 None:intergenic
TCCTTTAGTATACTTATCAT+TGG 0.345791 4_1:-80860310 None:intergenic
TCACAGGTTTCAATGCCTTT+TGG 0.346810 4_1:+80857648 Msa0576790:CDS
ACAAAATGCCAGTAGTTTGA+TGG 0.346950 4_1:-80857506 None:intergenic
CACTGTGTGTGCATGGCAAA+AGG 0.347146 4_1:+80857047 Msa0576790:CDS
TTAATTGCCAACACATTTCC+AGG 0.347300 4_1:-80858102 None:intergenic
AATTCTAATGGTTGTGCTAA+TGG 0.351045 4_1:+80857553 Msa0576790:CDS
ATTATTAATTGTACTGCATC+TGG 0.352180 4_1:-80861503 None:intergenic
GAGAGCAGGGTTCCTTTGAT+TGG 0.360308 4_1:+80860470 Msa0576790:CDS
GTGAGTTTGTTGAAGGGTTT+AGG 0.363562 4_1:-80857629 None:intergenic
TCTTGTGCTGGCGCTCCATA+TGG 0.364390 4_1:-80860235 None:intergenic
TGGTTCCATGGATAATCAAC+AGG 0.364932 4_1:-80857703 None:intergenic
GATCAACAAGATCCAGTTTA+GGG 0.365700 4_1:+80856177 Msa0576790:CDS
CCATCACTTGGCTCAGGAAT+AGG 0.375371 4_1:+80857129 Msa0576790:CDS
CCTTTACACTGGCCAATACT+AGG 0.375742 4_1:+80857582 Msa0576790:CDS
TTAAAGGTGGCTGTTTATCC+TGG 0.378237 4_1:+80858084 Msa0576790:intron
AAATCATGGGAAGGGGTAAC+AGG 0.380435 4_1:+80857530 Msa0576790:CDS
TCTTTCTGGTTGGTTGTCAT+TGG 0.382375 4_1:-80860394 None:intergenic
AAATTTAATTAATTATTAAA+GGG 0.383504 4_1:+80861368 Msa0576790:three_prime_UTR
AGGATAACTGGCGAAGATCC+TGG 0.387720 4_1:+80856934 Msa0576790:CDS
GACCATCGATCAAAACTTTA+GGG 0.388643 4_1:-80860213 None:intergenic
ATCATTAGGGGCAGAAGTTA+TGG 0.391564 4_1:-80858362 None:intergenic
TGAGCCAAGTGATGGTGTTT+CGG 0.392615 4_1:-80857121 None:intergenic
AAGATATATCCTGTGTCATC+CGG 0.395834 4_1:-80856657 None:intergenic
CTGGATGTTTGACAGTTTGT+TGG 0.396246 4_1:-80856589 None:intergenic
TGAGCCTAGTATCAAAGCTT+TGG 0.398240 4_1:-80856222 None:intergenic
AGTCCCAGAACTCCCTAAAC+TGG 0.398261 4_1:-80856189 None:intergenic
CTGCACCAGCGTTTACGAAC+AGG 0.400456 4_1:+80860558 Msa0576790:CDS
TTGGAGAAGAAGAAATCATT+TGG 0.402319 4_1:+80855600 Msa0576790:CDS
AAGTCCACTCTGTCCATTGA+TGG 0.403456 4_1:-80858643 None:intergenic
TTTGTAGACTTGGATGTATC+TGG 0.404431 4_1:+80857848 Msa0576790:intron
AGTACTTCTTCCAGGATAAC+TGG 0.406685 4_1:+80856922 Msa0576790:CDS
AACTCACCAACTTGTGCTTC+CGG 0.408559 4_1:-80860727 None:intergenic
TTTGTAGACAGTTCGCCAAT+TGG 0.411473 4_1:-80860686 None:intergenic
GCAAACAGGCAATAAGATAA+TGG 0.412713 4_1:-80857099 None:intergenic
TCCCATCACCATTTATGCAT+TGG 0.416748 4_1:+80857875 Msa0576790:CDS
CTGCTGTTTCTCCACTTGAA+TGG 0.420177 4_1:+80858184 Msa0576790:CDS
AGGATCTTCGCCAGTTATCC+TGG 0.422128 4_1:-80856932 None:intergenic
AACCAAACTTTACTTGACTA+AGG 0.422801 4_1:+80857721 Msa0576790:CDS
TGGGTATTTGCTCTGTGGAT+TGG 0.423588 4_1:+80856954 Msa0576790:CDS
GATCCAGTTTAGGGAGTTCT+GGG 0.425992 4_1:+80856186 Msa0576790:CDS
GACCTGGAAGGAAGTAAATC+AGG 0.427229 4_1:+80861465 Msa0576790:three_prime_UTR
ATAGCTTTGTAAAAGGACTA+AGG 0.428808 4_1:+80861248 Msa0576790:three_prime_UTR
TCAAGTAAAGTTTGGTTCCA+TGG 0.429335 4_1:-80857715 None:intergenic
TATAAAGCAGCTGAAGCGTT+TGG 0.432224 4_1:+80855653 Msa0576790:CDS
GTCAACATCTGTGACAGCTT+TGG 0.433709 4_1:-80855433 None:intergenic
TCTGTCCATTGATGGCTGGC+TGG 0.436385 4_1:-80858635 None:intergenic
AGTGTTCATATTAAAATACT+TGG 0.436750 4_1:+80858394 Msa0576790:CDS
GTGATGGTGTTTCGGCAAAC+AGG 0.438335 4_1:-80857113 None:intergenic
CTCGAGACTCTCTTATTACA+TGG 0.440397 4_1:+80856789 Msa0576790:CDS
AAGCTTAGGCCTACATTTGA+GGG 0.442339 4_1:+80856867 Msa0576790:CDS
CGATTATAGCTGAGTCATCT+TGG 0.450820 4_1:-80861164 None:intergenic
AAAGCTTAGGCCTACATTTG+AGG 0.451241 4_1:+80856866 Msa0576790:CDS
CAAGTCTGTGCGAATATTGA+AGG 0.452077 4_1:+80857929 Msa0576790:CDS
AGATACCAAGTACTTCTTCC+AGG 0.454959 4_1:+80856914 Msa0576790:CDS
CCTTCCAGGTCCCTTCTCCT+GGG 0.456314 4_1:-80861453 None:intergenic
TGTAGCTGAGGAGGATAGAA+GGG 0.458120 4_1:+80860513 Msa0576790:CDS
TTGAGGGAAATCCTATTAAG+AGG 0.459148 4_1:+80856883 Msa0576790:CDS
CATGAGAAACAGTCTTTGAC+TGG 0.459698 4_1:+80855570 Msa0576790:CDS
CAGGAGGGCATACTTCTATT+GGG 0.460300 4_1:+80860441 Msa0576790:CDS
GTTTGACAGTTTGTTGGCAG+TGG 0.460518 4_1:-80856583 None:intergenic
AGCTCGTGGGTCAGGGTGGA+TGG 0.460543 4_1:-80861015 None:intergenic
AGCATGAGCCACTGCAGACT+TGG 0.460746 4_1:-80855718 None:intergenic
GCAGTGGCTCATGCTCTCAC+TGG 0.463259 4_1:+80855726 Msa0576790:CDS
TTGTAGACAGTTCGCCAATT+GGG 0.465108 4_1:-80860685 None:intergenic
TACTCCCTGTAGTCTTGTGC+TGG 0.466522 4_1:-80860247 None:intergenic
ACTGTGTGTGCATGGCAAAA+GGG 0.469519 4_1:+80857048 Msa0576790:CDS
TCATCCCAGGAGAAGGGACC+TGG 0.471554 4_1:+80861449 Msa0576790:three_prime_UTR
CTATTGGGTGACAAGAGAGC+AGG 0.473115 4_1:+80860456 Msa0576790:CDS
GAGTCATCTTGGTGGAGGAC+TGG 0.473363 4_1:-80861153 None:intergenic
AAGGCCATGGAAAAGGAAGA+TGG 0.473474 4_1:+80860349 Msa0576790:CDS
TTTGGCTTAGCATTTGGCTC+AGG 0.474206 4_1:-80856845 None:intergenic
TTAACTTTGTGCTGTTCTCA+GGG 0.474665 4_1:-80855398 None:intergenic
ATAGCTCTGGCAATATCAAT+TGG 0.479283 4_1:+80857380 Msa0576790:CDS
GGTCAATAATTTCAAGGCCA+TGG 0.482542 4_1:+80860336 Msa0576790:CDS
GAGCGCCAGCACAAGACTAC+AGG 0.484229 4_1:+80860242 Msa0576790:CDS
GTTTGTTGGCAGTGGCGCTC+AGG 0.484580 4_1:-80856575 None:intergenic
GGAATATGCGGCTTTGATCA+TGG 0.484801 4_1:+80856623 Msa0576790:CDS
ATAGGATTTCCCTCAAATGT+AGG 0.484879 4_1:-80856876 None:intergenic
CCTAGTATTGGCCAGTGTAA+AGG 0.486019 4_1:-80857582 None:intergenic
GCTCGGCAGAGAGGGATTCA+AGG 0.486020 4_1:+80856148 Msa0576790:CDS
ACTTGTGGGGCTGGGAATAG+GGG 0.489561 4_1:+80860282 Msa0576790:CDS
TGATAAGATGAAAATAATTG+AGG 0.490052 4_1:+80861105 Msa0576790:exon
CCAATAGAAGTATGCCCTCC+TGG 0.490343 4_1:-80860440 None:intergenic
GGACATGGTCAATAATTTCA+AGG 0.490880 4_1:+80860330 Msa0576790:CDS
GATGGGTTTGCAATGGAAGA+AGG 0.492450 4_1:+80860367 Msa0576790:CDS
CTAAGAGCTGAATGCTTGAA+AGG 0.492708 4_1:+80858666 Msa0576790:CDS
CCACTCTGTCCATTGATGGC+TGG 0.495302 4_1:-80858639 None:intergenic
CACTGGCCAATACTAGGTTC+AGG 0.496070 4_1:+80857588 Msa0576790:CDS
TAATTTCAAGGCCATGGAAA+AGG 0.498073 4_1:+80860342 Msa0576790:CDS
CAAAGCTATAAAACAACCAT+TGG 0.500808 4_1:-80861234 None:intergenic
CATCCACACCGTGCTTTGCA+TGG 0.501999 4_1:-80860624 None:intergenic
AAATGCTAAGCCAAAAGCTT+AGG 0.502589 4_1:+80856853 Msa0576790:CDS
TCGCTCTGCTCTTATCGCTA+TGG 0.505630 4_1:+80860588 Msa0576790:CDS
CTCCAATGCATAAATGGTGA+TGG 0.507413 4_1:-80857877 None:intergenic
GCTTGCCAGCCAGCCATCAA+TGG 0.508521 4_1:+80858630 Msa0576790:CDS
ACAAGACTACAGGGAGTATG+AGG 0.514565 4_1:+80860252 Msa0576790:CDS
CCCAATGATAAGTATACTAA+AGG 0.515270 4_1:+80860309 Msa0576790:CDS
CACGGTGTGGATGTTGTGTC+CGG 0.523933 4_1:+80860634 Msa0576790:CDS
TTTATCAGCAAGACTGATGT+TGG 0.524031 4_1:+80855756 Msa0576790:CDS
AGGAACAAAAGCACCTAGCT+TGG 0.524887 4_1:-80857153 None:intergenic
AAGTTACCTTGTGAAAATTG+AGG 0.525188 4_1:-80857187 None:intergenic
ATTATAGTCATCCCAGGAGA+AGG 0.525896 4_1:+80861442 Msa0576790:three_prime_UTR
TTGGTATATAAGCACACTAT+AGG 0.529181 4_1:-80861215 None:intergenic
ACAGAAAGTGACATGGGAGA+AGG 0.529447 4_1:+80855543 Msa0576790:CDS
ACGCATTGCACTTAATCATC+CGG 0.530819 4_1:+80860708 Msa0576790:CDS
GAACCTAGAGTCTTTCTGGT+TGG 0.531369 4_1:-80860404 None:intergenic
AAGATCTGCATATGAAGTGA+TGG 0.532003 4_1:+80857022 Msa0576790:CDS
GGATGACACAGGATATATCT+TGG 0.533783 4_1:+80856659 Msa0576790:CDS
ATACTAAAGGTGAGGTAGGA+TGG 0.535314 4_1:+80861312 Msa0576790:three_prime_UTR
GAAACCTGTGAGTTTGTTGA+AGG 0.536478 4_1:-80857636 None:intergenic
GGATAACTGGCGAAGATCCT+GGG 0.536870 4_1:+80856935 Msa0576790:CDS
TAAACGTGGGGTAAATGGTT+AGG 0.537273 4_1:+80861271 Msa0576790:three_prime_UTR
ATACTCTTGCTCGGCAGAGA+GGG 0.537758 4_1:+80856140 Msa0576790:CDS
AACTTTACTTGACTAAGGAA+TGG 0.538178 4_1:+80857726 Msa0576790:CDS
ATTCCTCCTGAACCTAGTAT+TGG 0.538799 4_1:-80857594 None:intergenic
TCATTCATTATAGTCATCCC+AGG 0.538987 4_1:+80861436 Msa0576790:three_prime_UTR
CTCAGGAATAGGACCAAGCT+AGG 0.539998 4_1:+80857140 Msa0576790:CDS
CAGAAAGTGACATGGGAGAA+GGG 0.540117 4_1:+80855544 Msa0576790:CDS
ACCAGAACCAGCAAAACGAT+TGG 0.540196 4_1:+80855689 Msa0576790:CDS
GAAATCATTTGGTGCTTCAG+TGG 0.540248 4_1:+80855611 Msa0576790:CDS
CGAGCTTCGTCAGCTATCGT+TGG 0.542059 4_1:+80861032 Msa0576790:CDS
GTCTTTGACTGGGAACAAGT+TGG 0.542503 4_1:+80855581 Msa0576790:CDS
CACTATAGGTTATCAACGAA+AGG 0.542750 4_1:-80861201 None:intergenic
TAAATGGTTAGGTGGTGAGT+TGG 0.543275 4_1:+80861282 Msa0576790:three_prime_UTR
AGATATATCCTGTGTCATCC+GGG 0.543354 4_1:-80856656 None:intergenic
GAGAGAAACCATCAAACTAC+TGG 0.544014 4_1:+80857498 Msa0576790:CDS
CTGTGTGTGCATGGCAAAAG+GGG 0.545633 4_1:+80857049 Msa0576790:CDS
AGATCTGCATATGAAGTGAT+GGG 0.547819 4_1:+80857023 Msa0576790:CDS
CCAAATACTAAAGGTGAGGT+AGG 0.549175 4_1:+80861308 Msa0576790:three_prime_UTR
TCCAATGCATAAATGGTGAT+GGG 0.555776 4_1:-80857876 None:intergenic
AAATTGAGGCCATCATCAAA+AGG 0.555793 4_1:-80857173 None:intergenic
CTGACGAAGCTCGTGGGTCA+GGG 0.559327 4_1:-80861022 None:intergenic
GACAATCAAAACAGCAACAT+GGG 0.561675 4_1:+80855324 Msa0576790:exon
ACTCTCTTTGCTAAATGCAT+AGG 0.564240 4_1:+80855849 Msa0576790:CDS
GTTATCCTGGAAGAAGTACT+TGG 0.567722 4_1:-80856919 None:intergenic
ATTAATATGTCAAAGCCTCA+AGG 0.569847 4_1:+80858120 Msa0576790:CDS
AGTAAGTAACTACTACAGAA+AGG 0.570738 4_1:+80855251 Msa0576790:five_prime_UTR
ACAAATCCATACCATTCAAG+TGG 0.571736 4_1:-80858195 None:intergenic
AGGCCATGGAAAAGGAAGAT+GGG 0.572461 4_1:+80860350 Msa0576790:CDS
GAAACACCATCACTTGGCTC+AGG 0.576141 4_1:+80857123 Msa0576790:CDS
AGGATTGAATGAAGAGTCAA+AGG 0.577878 4_1:+80856096 Msa0576790:intron
TAGCTGAGTCATCTTGGTGG+AGG 0.578013 4_1:-80861158 None:intergenic
AGAGTCACCTTGAATGTCCA+TGG 0.578442 4_1:-80855493 None:intergenic
AGGGGTAACAGGAATTCTAA+TGG 0.579371 4_1:+80857541 Msa0576790:CDS
AGCAAGACTGATGTTGGTGC+AGG 0.579885 4_1:+80855762 Msa0576790:CDS
TTCCTTTGATTGGTTTAAAG+GGG 0.580836 4_1:+80860480 Msa0576790:CDS
CACCCCTTTAAACCAATCAA+AGG 0.583264 4_1:-80860482 None:intergenic
TGTTTATCCTGGAAATGTGT+TGG 0.584274 4_1:+80858095 Msa0576790:CDS
AAACCCTTCAACAAACTCAC+AGG 0.585965 4_1:+80857632 Msa0576790:CDS
GGAAATAGATAACCATGAGA+AGG 0.587784 4_1:+80861389 Msa0576790:three_prime_UTR
ATGGGTTTGCAATGGAAGAA+GGG 0.587848 4_1:+80860368 Msa0576790:CDS
TTATAGCTGAGTCATCTTGG+TGG 0.588058 4_1:-80861161 None:intergenic
TTTGCCGAAACACCATCACT+TGG 0.589013 4_1:+80857117 Msa0576790:CDS
TGCACCAGCGTTTACGAACA+GGG 0.589244 4_1:+80860559 Msa0576790:CDS
AGTTGGCTACCAAATACTAA+AGG 0.590303 4_1:+80861299 Msa0576790:three_prime_UTR
TCTGAAAACCAAATTCTCAC+AGG 0.591788 4_1:+80858432 Msa0576790:CDS
AAGATAACCGTCAGTTGTCA+CGG 0.592953 4_1:-80855820 None:intergenic
AAAGGAAGATGGGTTTGCAA+TGG 0.593225 4_1:+80860360 Msa0576790:CDS
CTGGCAATATCAATTGGTGT+TGG 0.593359 4_1:+80857386 Msa0576790:CDS
ACTATAGGTTATCAACGAAA+GGG 0.593711 4_1:-80861200 None:intergenic
ATAGTGTGCTTATATACCAA+TGG 0.594270 4_1:+80861218 Msa0576790:three_prime_UTR
CCTATTCCTGAGCCAAGTGA+TGG 0.595115 4_1:-80857129 None:intergenic
AAAATAATTGAGGATAACAG+TGG 0.596889 4_1:+80861115 Msa0576790:three_prime_UTR
GAGGATAACAGTGGAAGGTG+TGG 0.597237 4_1:+80861124 Msa0576790:three_prime_UTR
CAACCAACCAGAAAGACTCT+AGG 0.598818 4_1:+80860401 Msa0576790:CDS
TATGCCCTGTTGATTATCCA+TGG 0.599483 4_1:+80857698 Msa0576790:CDS
AATCATCCGGAAGCACAAGT+TGG 0.599828 4_1:+80860721 Msa0576790:CDS
ATGAGACATGACACGAGTGC+CGG 0.599911 4_1:-80860653 None:intergenic
ATGACGACACACTTATGCAA+GGG 0.601258 4_1:-80861337 None:intergenic
GAGGTGATGAGAATACCAAA+AGG 0.602190 4_1:-80857663 None:intergenic
AGAAAGTGACATGGGAGAAG+GGG 0.602662 4_1:+80855545 Msa0576790:CDS
TAACTTTGTGCTGTTCTCAG+GGG 0.604777 4_1:-80855397 None:intergenic
CAAGGATTTAGCTATAAGAG+TGG 0.606086 4_1:+80858138 Msa0576790:CDS
GTAGCTGAGGAGGATAGAAG+GGG 0.606303 4_1:+80860514 Msa0576790:CDS
GGGCATACACAATGATGAAG+AGG 0.609765 4_1:-80857682 None:intergenic
TTATAGTCATCCCAGGAGAA+GGG 0.609894 4_1:+80861443 Msa0576790:three_prime_UTR
AAGCTTACCGTGACAACTGA+CGG 0.610596 4_1:+80855813 Msa0576790:CDS
TCTATAAACCATGCAAAGCA+CGG 0.611338 4_1:+80860616 Msa0576790:CDS
GAACTAGACCCGGATGACAC+AGG 0.611910 4_1:+80856648 Msa0576790:CDS
CTTTAGTATACTTATCATTG+GGG 0.612008 4_1:-80860308 None:intergenic
ATCACCCTGTTCGTAAACGC+TGG 0.614534 4_1:-80860563 None:intergenic
ACGATAGCTGACGAAGCTCG+TGG 0.614905 4_1:-80861029 None:intergenic
AAAGGCAAATAGGCCTAACA+TGG 0.615986 4_1:-80856979 None:intergenic
TGACAATCAAAACAGCAACA+TGG 0.616414 4_1:+80855323 Msa0576790:exon
AGAAGATGCAGACTATGTTG+AGG 0.617846 4_1:+80855467 Msa0576790:CDS
CATTTAGCAAAGAGAGTGCG+AGG 0.617870 4_1:-80855843 None:intergenic
TAATTGAGGATAACAGTGGA+AGG 0.620492 4_1:+80861119 Msa0576790:three_prime_UTR
GATGGGGCACTGTGTGTGCA+TGG 0.620735 4_1:+80857040 Msa0576790:CDS
AAAAGGACTAAGGTAAACGT+GGG 0.625790 4_1:+80861258 Msa0576790:three_prime_UTR
TATTGGGTGACAAGAGAGCA+GGG 0.629336 4_1:+80860457 Msa0576790:CDS
AACTGTAACAGAAAGTGACA+TGG 0.630724 4_1:+80855536 Msa0576790:CDS
ACGTGGGGTAAATGGTTAGG+TGG 0.631214 4_1:+80861274 Msa0576790:three_prime_UTR
TAAAAGGACTAAGGTAAACG+TGG 0.631345 4_1:+80861257 Msa0576790:three_prime_UTR
GAGGTGACCATGGACATTCA+AGG 0.631878 4_1:+80855486 Msa0576790:CDS
GATCCTGGGTATTTGCTCTG+TGG 0.632359 4_1:+80856949 Msa0576790:CDS
CTCTTATAGCTAAATCCTTG+AGG 0.633436 4_1:-80858135 None:intergenic
AGGGAAATCCTATTAAGAGG+TGG 0.634832 4_1:+80856886 Msa0576790:CDS
AGATGCAGATGGAAGAATCA+CGG 0.635081 4_1:+80856355 Msa0576790:CDS
CATGACGACACACTTATGCA+AGG 0.635369 4_1:-80861338 None:intergenic
AGCGCCAGCACAAGACTACA+GGG 0.635514 4_1:+80860243 Msa0576790:CDS
ACGAAGCTCGTGGGTCAGGG+TGG 0.637836 4_1:-80861019 None:intergenic
TTGCTTGCATGAAGAATGCG+AGG 0.639037 4_1:-80857443 None:intergenic
TGACGACACACTTATGCAAG+GGG 0.641142 4_1:-80861336 None:intergenic
ATGGACCAGAAGAAACTACA+AGG 0.641148 4_1:+80856808 Msa0576790:CDS
AAACCTGTGAGTTTGTTGAA+GGG 0.643367 4_1:-80857635 None:intergenic
CCCAGGAGAAGGGACCTGGA+AGG 0.645269 4_1:+80861453 Msa0576790:three_prime_UTR
GATGAATGATGTAGCTGAGG+AGG 0.645963 4_1:+80860504 Msa0576790:CDS
TGAAAGGAGATAACAGCCCA+AGG 0.651260 4_1:+80858682 Msa0576790:CDS
ATAGGTTATCAACGAAAGGG+TGG 0.651538 4_1:-80861197 None:intergenic
CGATAGCTGACGAAGCTCGT+GGG 0.651822 4_1:-80861028 None:intergenic
GATCATGGAAGAACTAGACC+CGG 0.653019 4_1:+80856638 Msa0576790:CDS
ACTGTAACAGAAAGTGACAT+GGG 0.653158 4_1:+80855537 Msa0576790:CDS
GGAGAGGACCAAGTCTGCAG+TGG 0.653264 4_1:+80855710 Msa0576790:CDS
AGGGTTGACAAAGATGCAGA+TGG 0.653404 4_1:+80856344 Msa0576790:intron
CCAGCCATCAATGGACAGAG+TGG 0.654950 4_1:+80858639 Msa0576790:CDS
ATGAGAAACAGTCTTTGACT+GGG 0.655734 4_1:+80855571 Msa0576790:CDS
AAACCATGCAAAGCACGGTG+TGG 0.657785 4_1:+80860621 Msa0576790:CDS
GCTACCAAATACTAAAGGTG+AGG 0.659426 4_1:+80861304 Msa0576790:three_prime_UTR
TGAAACACTTAAATTGAACA+TGG 0.659896 4_1:+80857076 Msa0576790:CDS
GATACTCTTGCTCGGCAGAG+AGG 0.662539 4_1:+80856139 Msa0576790:CDS
GATAAGTATACTAAAGGACA+TGG 0.662957 4_1:+80860315 Msa0576790:CDS
GGTTCAGTGACTTCAAGACC+AGG 0.664037 4_1:+80860422 Msa0576790:CDS
CTGGAAGGAAGTAAATCAGG+AGG 0.664305 4_1:+80861468 Msa0576790:three_prime_UTR
TGGACCAGAAGAAACTACAA+GGG 0.669280 4_1:+80856809 Msa0576790:CDS
AGACTGATGTTGGTGCAGGA+TGG 0.677140 4_1:+80855766 Msa0576790:CDS
TGGCCAATACTAGGTTCAGG+AGG 0.678224 4_1:+80857591 Msa0576790:CDS
AATGGCAATAGCCTTTACAC+TGG 0.678535 4_1:+80857571 Msa0576790:CDS
AACCAGCAAAACGATTGGAG+AGG 0.682714 4_1:+80855694 Msa0576790:CDS
AATCAAAACAGCAACATGGG+AGG 0.683736 4_1:+80855327 Msa0576790:exon
GAAACAAGCAGAGGAATATG+CGG 0.686297 4_1:+80856611 Msa0576790:CDS
GATCTGCATATGAAGTGATG+GGG 0.689301 4_1:+80857024 Msa0576790:CDS
GGTGATGAATGATGTAGCTG+AGG 0.689759 4_1:+80860501 Msa0576790:CDS
AGACTACAGGGAGTATGAGG+TGG 0.691268 4_1:+80860255 Msa0576790:CDS
TCAGTGACTTCAAGACCAGG+AGG 0.699104 4_1:+80860425 Msa0576790:CDS
AAACATCCAGAAACAAGCAG+AGG 0.703458 4_1:+80856602 Msa0576790:CDS
CAGTGACTTCAAGACCAGGA+GGG 0.708547 4_1:+80860426 Msa0576790:CDS
TGGAAGGAAGTAAATCAGGA+GGG 0.710428 4_1:+80861469 Msa0576790:three_prime_UTR
CGGCAGAGAGGGATTCAAGG+AGG 0.710701 4_1:+80856151 Msa0576790:CDS
ACTAAGGTAATCATCATTAG+GGG 0.710937 4_1:-80858374 None:intergenic
GGACCAGAAGAAACTACAAG+GGG 0.713114 4_1:+80856810 Msa0576790:CDS
AGACTATGTTGAGGTGACCA+TGG 0.715108 4_1:+80855476 Msa0576790:CDS
GGTTCCATGGATAATCAACA+GGG 0.719137 4_1:-80857702 None:intergenic
AATCCACAGAGCAAATACCC+AGG 0.727261 4_1:-80856952 None:intergenic
AAAGGACTAAGGTAAACGTG+GGG 0.736332 4_1:+80861259 Msa0576790:three_prime_UTR
TGCAGATGGAAGAATCACGG+AGG 0.763636 4_1:+80856358 Msa0576790:CDS
GACGACACACTTATGCAAGG+GGG 0.786638 4_1:-80861335 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATTTAATTAATTATTAA+AGG + chr4_1:80861367-80861386 Msa0576790:three_prime_UTR 0.0%
!! AAATTTAATTAATTATTAAA+GGG + chr4_1:80861368-80861387 Msa0576790:three_prime_UTR 0.0%
!! ATTTATCATTTAAAAAAAGT+TGG - chr4_1:80859805-80859824 None:intergenic 10.0%
!!! TTTTTATCTCTTTTTTTTTT+GGG - chr4_1:80860017-80860036 None:intergenic 10.0%
!!! ATTTATCATTTGAAACAATA+TGG - chr4_1:80855888-80855907 None:intergenic 15.0%
!!! TTGAAATAGTTATTTTAATC+TGG - chr4_1:80856716-80856735 None:intergenic 15.0%
!! TTTGAGTGAAAAAAAAAATT+AGG + chr4_1:80859289-80859308 Msa0576790:intron 15.0%
!! TTGAGTGAAAAAAAAAATTA+GGG + chr4_1:80859290-80859309 Msa0576790:intron 15.0%
!!! TTGAATACATATATTTTCAA+AGG - chr4_1:80859521-80859540 None:intergenic 15.0%
!! ATAAAAAAATTAATATTGGC+TGG - chr4_1:80859693-80859712 None:intergenic 15.0%
!!! TTTTTTATGAATGAGTATTT+AGG + chr4_1:80859705-80859724 Msa0576790:intron 15.0%
!!! CTTTTTATCTCTTTTTTTTT+TGG - chr4_1:80860018-80860037 None:intergenic 15.0%
!! ATTTCAACATAAAAAGAAAA+TGG + chr4_1:80860853-80860872 Msa0576790:intron 15.0%
!! TAAATGATAAGTTAAGAACT+TGG + chr4_1:80855903-80855922 Msa0576790:intron 20.0%
!!! ATAAAAGTATTCCAAAGTAA+GGG - chr4_1:80857782-80857801 None:intergenic 20.0%
!!! TATAAAAGTATTCCAAAGTA+AGG - chr4_1:80857783-80857802 None:intergenic 20.0%
!! CATTTCATTGTCAAATTTAA+AGG + chr4_1:80858068-80858087 Msa0576790:intron 20.0%
!! GAAACATTCTATATTAAATG+TGG + chr4_1:80858225-80858244 Msa0576790:intron 20.0%
!! GGGAAATAAAAATAGAAAAA+CGG - chr4_1:80858285-80858304 None:intergenic 20.0%
!! AATGCATAAACAATGAATTA+AGG - chr4_1:80858326-80858345 None:intergenic 20.0%
!!! GTATTTTAATATGAACACTA+AGG - chr4_1:80858393-80858412 None:intergenic 20.0%
!! AGTGTTCATATTAAAATACT+TGG + chr4_1:80858394-80858413 Msa0576790:CDS 20.0%
!!! ATATTAAAATACTTGGTGAT+TGG + chr4_1:80858401-80858420 Msa0576790:CDS 20.0%
!! AGAAAACACATAATAAATTC+AGG - chr4_1:80858574-80858593 None:intergenic 20.0%
!! TATTTAAATCCTTATCTTAC+AGG - chr4_1:80858883-80858902 None:intergenic 20.0%
!! AAGATAAGGATTTAAATATC+AGG + chr4_1:80858885-80858904 Msa0576790:intron 20.0%
!! TAATCATTTGATTATAAGCA+GGG - chr4_1:80859206-80859225 None:intergenic 20.0%
!! ATAATCATTTGATTATAAGC+AGG - chr4_1:80859207-80859226 None:intergenic 20.0%
!! AATCAAATGATTATGTTAAG+CGG + chr4_1:80859213-80859232 Msa0576790:intron 20.0%
!! AAAAAAAAATTAGGGTGATA+AGG + chr4_1:80859298-80859317 Msa0576790:intron 20.0%
!! TTGTTAATTACAAATATGCA+TGG - chr4_1:80860121-80860140 None:intergenic 20.0%
!!! TCATAACATACAATCATTTT+CGG - chr4_1:80860171-80860190 None:intergenic 20.0%
!! ACTTAATCATATCATCATAT+TGG + chr4_1:80860942-80860961 Msa0576790:intron 20.0%
!!! ATCATTTTTTTTTGTAATGC+AGG + chr4_1:80860976-80860995 Msa0576790:intron 20.0%
!!! TCATTTTTTTTTGTAATGCA+GGG + chr4_1:80860977-80860996 Msa0576790:intron 20.0%
!! TGATAAGATGAAAATAATTG+AGG + chr4_1:80861105-80861124 Msa0576790:exon 20.0%
!!! TTGTTTTATAGCTTTGTAAA+AGG + chr4_1:80861241-80861260 Msa0576790:three_prime_UTR 20.0%
! TTGAAACAATATGGTAAAAC+AGG - chr4_1:80855879-80855898 None:intergenic 25.0%
! GTAATTTCTAAGTGTTTCTT+TGG + chr4_1:80856063-80856082 Msa0576790:intron 25.0%
!!! TGACATGTAATTCTTTGTTT+TGG + chr4_1:80856255-80856274 Msa0576790:intron 25.0%
!!! CAAAATAAATGTTGGTGATA+TGG - chr4_1:80856319-80856338 None:intergenic 25.0%
!!! CAACATTTATTTTGATTGCA+GGG + chr4_1:80856325-80856344 Msa0576790:intron 25.0%
! AAAATATGGTCAAATGAGTA+AGG - chr4_1:80856755-80856774 None:intergenic 25.0%
!!! TTGACCATATTTTAACAGAT+AGG + chr4_1:80856762-80856781 Msa0576790:intron 25.0%
! ATTGCCTATCTGTTAAAATA+TGG - chr4_1:80856769-80856788 None:intergenic 25.0%
! CCTATATTGCACAAATTTAA+AGG - chr4_1:80857000-80857019 None:intergenic 25.0%
! CCTTTAAATTTGTGCAATAT+AGG + chr4_1:80856997-80857016 Msa0576790:CDS 25.0%
! TGAAACACTTAAATTGAACA+TGG + chr4_1:80857076-80857095 Msa0576790:CDS 25.0%
! ATATGATATGAAAACACACA+TGG + chr4_1:80857986-80858005 Msa0576790:intron 25.0%
! TATCGAAATTACTTCTGTTA+TGG + chr4_1:80858012-80858031 Msa0576790:intron 25.0%
! TTCATTGTCAAATTTAAAGG+TGG + chr4_1:80858071-80858090 Msa0576790:intron 25.0%
! GGTATAGAAATCAGATAAAT+GGG - chr4_1:80858305-80858324 None:intergenic 25.0%
! AGGTATAGAAATCAGATAAA+TGG - chr4_1:80858306-80858325 None:intergenic 25.0%
!!! TTATTGCTTTTGTTTCTATC+AGG + chr4_1:80858608-80858627 Msa0576790:intron 25.0%
! TTCTACAAATATCTGATAGT+AGG + chr4_1:80858750-80858769 Msa0576790:intron 25.0%
! TACGTATAACTTCTATTGTA+AGG - chr4_1:80858995-80859014 None:intergenic 25.0%
!! ATAGAAGTTATACGTACTTT+TGG + chr4_1:80858999-80859018 Msa0576790:intron 25.0%
! TAAAGAACCAACTTAATTAC+CGG + chr4_1:80859065-80859084 Msa0576790:intron 25.0%
! ATTATTGGATCAATGATATC+CGG - chr4_1:80859087-80859106 None:intergenic 25.0%
! TAAACACGTTCTTCAATTAT+TGG - chr4_1:80859102-80859121 None:intergenic 25.0%
!!! GTTTTTTGTTTTGTCCAATT+TGG + chr4_1:80859139-80859158 Msa0576790:intron 25.0%
! ATCAAATGATTATGTTAAGC+GGG + chr4_1:80859214-80859233 Msa0576790:intron 25.0%
! GTTAAGAAATCAAATGTAGA+AGG - chr4_1:80859468-80859487 None:intergenic 25.0%
! GAGAAAACTGCATAAAATAT+TGG - chr4_1:80859576-80859595 None:intergenic 25.0%
! TATTAAATGTGTACCTTAGA+AGG + chr4_1:80859733-80859752 Msa0576790:intron 25.0%
! ATTAAATGTGTACCTTAGAA+GGG + chr4_1:80859734-80859753 Msa0576790:intron 25.0%
! AGAGATTTAAATGTAGTAGT+AGG - chr4_1:80859859-80859878 None:intergenic 25.0%
! CTTTAGTATACTTATCATTG+GGG - chr4_1:80860311-80860330 None:intergenic 25.0%
! CCTTTAGTATACTTATCATT+GGG - chr4_1:80860312-80860331 None:intergenic 25.0%
! TCCTTTAGTATACTTATCAT+TGG - chr4_1:80860313-80860332 None:intergenic 25.0%
! CAATGATCAATAATATGCTT+TGG + chr4_1:80860823-80860842 Msa0576790:intron 25.0%
!!! CATTTTTTTTTGTAATGCAG+GGG + chr4_1:80860978-80860997 Msa0576790:intron 25.0%
! TTCTTTATGAAAGTCGAATT+TGG - chr4_1:80861079-80861098 None:intergenic 25.0%
! AAAATAATTGAGGATAACAG+TGG + chr4_1:80861115-80861134 Msa0576790:three_prime_UTR 25.0%
! ATTATTAATTGTACTGCATC+TGG - chr4_1:80861506-80861525 None:intergenic 25.0%
AGTAAGTAACTACTACAGAA+AGG + chr4_1:80855251-80855270 Msa0576790:five_prime_UTR 30.0%
TTGGAGAAGAAGAAATCATT+TGG + chr4_1:80855600-80855619 Msa0576790:CDS 30.0%
GGTAGAGACATAAAAAACAT+TGG - chr4_1:80855938-80855957 None:intergenic 30.0%
TGCAACTTTAATAGTTGTGA+TGG - chr4_1:80855959-80855978 None:intergenic 30.0%
GTTTCTTTGGATTCAATTGT+AGG + chr4_1:80856076-80856095 Msa0576790:intron 30.0%
!! AAATGTTGGTGATATGGTTA+CGG - chr4_1:80856313-80856332 None:intergenic 30.0%
CCTGCAATCAAAATAAATGT+TGG - chr4_1:80856327-80856346 None:intergenic 30.0%
!!! CCAACATTTATTTTGATTGC+AGG + chr4_1:80856324-80856343 Msa0576790:intron 30.0%
ACAATCATTCAAGCAAAAGT+TGG - chr4_1:80856507-80856526 None:intergenic 30.0%
GCACAAATTTAAAGGCAAAT+AGG - chr4_1:80856992-80857011 None:intergenic 30.0%
AAGTTACCTTGTGAAAATTG+AGG - chr4_1:80857190-80857209 None:intergenic 30.0%
! ATTTTGTCAAATCATGGGAA+GGG + chr4_1:80857522-80857541 Msa0576790:CDS 30.0%
AATTCTAATGGTTGTGCTAA+TGG + chr4_1:80857553-80857572 Msa0576790:CDS 30.0%
AACCAAACTTTACTTGACTA+AGG + chr4_1:80857721-80857740 Msa0576790:CDS 30.0%
TTCCTTAGTCAAGTAAAGTT+TGG - chr4_1:80857726-80857745 None:intergenic 30.0%
AACTTTACTTGACTAAGGAA+TGG + chr4_1:80857726-80857745 Msa0576790:CDS 30.0%
AATGGAACCATAAAACAGTT+AGG + chr4_1:80857744-80857763 Msa0576790:intron 30.0%
TATTATGTGCTTTGTAGACT+TGG + chr4_1:80857838-80857857 Msa0576790:intron 30.0%
ATTAATATGTCAAAGCCTCA+AGG + chr4_1:80858120-80858139 Msa0576790:CDS 30.0%
TTCATTGTTTATGCATTCAC+AGG + chr4_1:80858329-80858348 Msa0576790:intron 30.0%
ACTAAGGTAATCATCATTAG+GGG - chr4_1:80858377-80858396 None:intergenic 30.0%
CACTAAGGTAATCATCATTA+GGG - chr4_1:80858378-80858397 None:intergenic 30.0%
ACACTAAGGTAATCATCATT+AGG - chr4_1:80858379-80858398 None:intergenic 30.0%
AATATTCACCTGTGAGAATT+TGG - chr4_1:80858443-80858462 None:intergenic 30.0%
AAAACATTAAGGCATACCTT+GGG - chr4_1:80858701-80858720 None:intergenic 30.0%
AAAAACATTAAGGCATACCT+TGG - chr4_1:80858702-80858721 None:intergenic 30.0%
!! TGCCTTAATGTTTTTGCTTT+TGG + chr4_1:80858707-80858726 Msa0576790:intron 30.0%
TGCCAAAAGCAAAAACATTA+AGG - chr4_1:80858712-80858731 None:intergenic 30.0%
ACAAATATCTGATAGTAGGT+AGG + chr4_1:80858754-80858773 Msa0576790:intron 30.0%
TAACATGCAAAAACTGTAGT+TGG + chr4_1:80858777-80858796 Msa0576790:intron 30.0%
TTAACTTCACCTGTAAGATA+AGG + chr4_1:80858871-80858890 Msa0576790:intron 30.0%
AAAAGCCTATAACTAAGGTT+AGG + chr4_1:80858908-80858927 Msa0576790:intron 30.0%
ATGATATCCGGTAATTAAGT+TGG - chr4_1:80859075-80859094 None:intergenic 30.0%
!! TTGTTTTGTCCAATTTGGTT+TGG + chr4_1:80859144-80859163 Msa0576790:intron 30.0%
AATTGACATCCAAACCAAAT+TGG - chr4_1:80859156-80859175 None:intergenic 30.0%
GATGTCAATTTATATTCCCA+TGG + chr4_1:80859166-80859185 Msa0576790:intron 30.0%
TCAAATGATTATGTTAAGCG+GGG + chr4_1:80859215-80859234 Msa0576790:intron 30.0%
!! ATAAGGACGCTTTTTGAAAA+TGG + chr4_1:80859315-80859334 Msa0576790:intron 30.0%
!! TAAGGACGCTTTTTGAAAAT+GGG + chr4_1:80859316-80859335 Msa0576790:intron 30.0%
ACAAGTTAAGGAGCTTAAAA+TGG + chr4_1:80859364-80859383 Msa0576790:intron 30.0%
! CAAATGTAGAAGGTTTTTCT+TGG - chr4_1:80859458-80859477 None:intergenic 30.0%
ATTTCTTAACTTATGCCTCA+AGG + chr4_1:80859478-80859497 Msa0576790:intron 30.0%
TTTCTTAACTTATGCCTCAA+GGG + chr4_1:80859479-80859498 Msa0576790:intron 30.0%
! AATATTGGCTGTAGAAAATC+TGG - chr4_1:80859561-80859580 None:intergenic 30.0%
TTTGTAAGTGTACCTTAGAA+GGG + chr4_1:80859628-80859647 Msa0576790:intron 30.0%
ACATAATCCACAATTCAAGT+TGG - chr4_1:80859928-80859947 None:intergenic 30.0%
ATTACAAATATGCATGGTAG+AGG - chr4_1:80860115-80860134 None:intergenic 30.0%
CCCAATGATAAGTATACTAA+AGG + chr4_1:80860309-80860328 Msa0576790:CDS 30.0%
GATAAGTATACTAAAGGACA+TGG + chr4_1:80860315-80860334 Msa0576790:CDS 30.0%
!! GTTCCTTTGATTGGTTTAAA+GGG + chr4_1:80860479-80860498 Msa0576790:CDS 30.0%
!! TTCCTTTGATTGGTTTAAAG+GGG + chr4_1:80860480-80860499 Msa0576790:CDS 30.0%
AATTGTCACATTCCATAAGT+GGG - chr4_1:80860753-80860772 None:intergenic 30.0%
ACGAAACACGTCAAATAAAA+AGG - chr4_1:80860919-80860938 None:intergenic 30.0%
ACTATAGGTTATCAACGAAA+GGG - chr4_1:80861203-80861222 None:intergenic 30.0%
TTGGTATATAAGCACACTAT+AGG - chr4_1:80861218-80861237 None:intergenic 30.0%
ATAGTGTGCTTATATACCAA+TGG + chr4_1:80861218-80861237 Msa0576790:three_prime_UTR 30.0%
CAAAGCTATAAAACAACCAT+TGG - chr4_1:80861237-80861256 None:intergenic 30.0%
!! ATAGCTTTGTAAAAGGACTA+AGG + chr4_1:80861248-80861267 Msa0576790:three_prime_UTR 30.0%
AAAACAAAAAAGCCTTCTCA+TGG - chr4_1:80861404-80861423 None:intergenic 30.0%
TGACAATCAAAACAGCAACA+TGG + chr4_1:80855323-80855342 Msa0576790:exon 35.0%
GACAATCAAAACAGCAACAT+GGG + chr4_1:80855324-80855343 Msa0576790:exon 35.0%
! TTAACTTTGTGCTGTTCTCA+GGG - chr4_1:80855401-80855420 None:intergenic 35.0%
CTGCATCTTCTTCTTTGTTA+TGG - chr4_1:80855458-80855477 None:intergenic 35.0%
! TACAGTTTTCACACTGTGTA+AGG - chr4_1:80855523-80855542 None:intergenic 35.0%
AACTGTAACAGAAAGTGACA+TGG + chr4_1:80855536-80855555 Msa0576790:CDS 35.0%
ACTGTAACAGAAAGTGACAT+GGG + chr4_1:80855537-80855556 Msa0576790:CDS 35.0%
ATGAGAAACAGTCTTTGACT+GGG + chr4_1:80855571-80855590 Msa0576790:CDS 35.0%
TTTATCAGCAAGACTGATGT+TGG + chr4_1:80855756-80855775 Msa0576790:CDS 35.0%
ACTCTCTTTGCTAAATGCAT+AGG + chr4_1:80855849-80855868 Msa0576790:CDS 35.0%
AGGATTGAATGAAGAGTCAA+AGG + chr4_1:80856096-80856115 Msa0576790:intron 35.0%
!! ATCAAAAAGCATCTCAGCAT+AGG - chr4_1:80856122-80856141 None:intergenic 35.0%
!! TGCTTTTTGATACTCTTGCT+CGG + chr4_1:80856131-80856150 Msa0576790:CDS 35.0%
GATCAACAAGATCCAGTTTA+GGG + chr4_1:80856177-80856196 Msa0576790:CDS 35.0%
AAGATATATCCTGTGTCATC+CGG - chr4_1:80856660-80856679 None:intergenic 35.0%
!!! TAAGCTTTTGGCTTAGCATT+TGG - chr4_1:80856854-80856873 None:intergenic 35.0%
AAATGCTAAGCCAAAAGCTT+AGG + chr4_1:80856853-80856872 Msa0576790:CDS 35.0%
ATAGGATTTCCCTCAAATGT+AGG - chr4_1:80856879-80856898 None:intergenic 35.0%
TTGAGGGAAATCCTATTAAG+AGG + chr4_1:80856883-80856902 Msa0576790:CDS 35.0%
TCTCTATACCACCTCTTAAT+AGG - chr4_1:80856897-80856916 None:intergenic 35.0%
AAGATCTGCATATGAAGTGA+TGG + chr4_1:80857022-80857041 Msa0576790:CDS 35.0%
AGATCTGCATATGAAGTGAT+GGG + chr4_1:80857023-80857042 Msa0576790:CDS 35.0%
GCAAACAGGCAATAAGATAA+TGG - chr4_1:80857102-80857121 None:intergenic 35.0%
! GCTTTTGTTCCTTTTGATGA+TGG + chr4_1:80857164-80857183 Msa0576790:CDS 35.0%
AAATTGAGGCCATCATCAAA+AGG - chr4_1:80857176-80857195 None:intergenic 35.0%
AAGTATCTTGTCACTCTTGA+TGG - chr4_1:80857228-80857247 None:intergenic 35.0%
! ATTTTTGCAGATGATAGCTC+TGG + chr4_1:80857367-80857386 Msa0576790:intron 35.0%
!! ATAGCTCTGGCAATATCAAT+TGG + chr4_1:80857380-80857399 Msa0576790:CDS 35.0%
!!! AAGCTGATTGAGCCTTTTTT+CGG + chr4_1:80857476-80857495 Msa0576790:CDS 35.0%
ACAAAATGCCAGTAGTTTGA+TGG - chr4_1:80857509-80857528 None:intergenic 35.0%
! ACTGGCATTTTGTCAAATCA+TGG + chr4_1:80857516-80857535 Msa0576790:CDS 35.0%
! CTGGCATTTTGTCAAATCAT+GGG + chr4_1:80857517-80857536 Msa0576790:CDS 35.0%
! CATTTTGTCAAATCATGGGA+AGG + chr4_1:80857521-80857540 Msa0576790:CDS 35.0%
! TTTTGTCAAATCATGGGAAG+GGG + chr4_1:80857523-80857542 Msa0576790:CDS 35.0%
!! AAACCTGTGAGTTTGTTGAA+GGG - chr4_1:80857638-80857657 None:intergenic 35.0%
! TCAAGTAAAGTTTGGTTCCA+TGG - chr4_1:80857718-80857737 None:intergenic 35.0%
! TGAAGGTCCTAACTGTTTTA+TGG - chr4_1:80857754-80857773 None:intergenic 35.0%
TTTGTAGACTTGGATGTATC+TGG + chr4_1:80857848-80857867 Msa0576790:intron 35.0%
TCCAATGCATAAATGGTGAT+GGG - chr4_1:80857879-80857898 None:intergenic 35.0%
AAGTCTCTCCAATGCATAAA+TGG - chr4_1:80857886-80857905 None:intergenic 35.0%
TGTTTATCCTGGAAATGTGT+TGG + chr4_1:80858095-80858114 Msa0576790:CDS 35.0%
TTAATTGCCAACACATTTCC+AGG - chr4_1:80858105-80858124 None:intergenic 35.0%
CTCTTATAGCTAAATCCTTG+AGG - chr4_1:80858138-80858157 None:intergenic 35.0%
CAAGGATTTAGCTATAAGAG+TGG + chr4_1:80858138-80858157 Msa0576790:CDS 35.0%
ACAAATCCATACCATTCAAG+TGG - chr4_1:80858198-80858217 None:intergenic 35.0%
TCTGAAAACCAAATTCTCAC+AGG + chr4_1:80858432-80858451 Msa0576790:CDS 35.0%
TCAGGAAAAGCCTATAACTA+AGG + chr4_1:80858903-80858922 Msa0576790:intron 35.0%
AGTGTCCTAACCTTAGTTAT+AGG - chr4_1:80858916-80858935 None:intergenic 35.0%
GTAAGGTCTTTACATTCGTT+TGG - chr4_1:80858978-80858997 None:intergenic 35.0%
!!! GACTGTTGTCTTGTTTTTTC+TGG + chr4_1:80859249-80859268 Msa0576790:intron 35.0%
!! TAGAAAATCTGGATTGGCTT+TGG - chr4_1:80859550-80859569 None:intergenic 35.0%
GTTTGTAAGTGTACCTTAGA+AGG + chr4_1:80859627-80859646 Msa0576790:intron 35.0%
ATCAGCGTTTGCATGATTAT+TGG - chr4_1:80860086-80860105 None:intergenic 35.0%
!! TTCCCTAAAGTTTTGATCGA+TGG + chr4_1:80860211-80860230 Msa0576790:CDS 35.0%
GACCATCGATCAAAACTTTA+GGG - chr4_1:80860216-80860235 None:intergenic 35.0%
!! TATGAGGTGGTTTTACTTGT+GGG + chr4_1:80860268-80860287 Msa0576790:CDS 35.0%
GGACATGGTCAATAATTTCA+AGG + chr4_1:80860330-80860349 Msa0576790:CDS 35.0%
TAATTTCAAGGCCATGGAAA+AGG + chr4_1:80860342-80860361 Msa0576790:CDS 35.0%
!! GGTTCCTTTGATTGGTTTAA+AGG + chr4_1:80860478-80860497 Msa0576790:CDS 35.0%
TCTATAAACCATGCAAAGCA+CGG + chr4_1:80860616-80860635 Msa0576790:CDS 35.0%
! CTCATTTTGCTAAACCCAAT+TGG + chr4_1:80860671-80860690 Msa0576790:CDS 35.0%
CAATTGTCACATTCCATAAG+TGG - chr4_1:80860754-80860773 None:intergenic 35.0%
TAATTGAGGATAACAGTGGA+AGG + chr4_1:80861119-80861138 Msa0576790:three_prime_UTR 35.0%
CACTATAGGTTATCAACGAA+AGG - chr4_1:80861204-80861223 None:intergenic 35.0%
TAAAAGGACTAAGGTAAACG+TGG + chr4_1:80861257-80861276 Msa0576790:three_prime_UTR 35.0%
AAAAGGACTAAGGTAAACGT+GGG + chr4_1:80861258-80861277 Msa0576790:three_prime_UTR 35.0%
AGTTGGCTACCAAATACTAA+AGG + chr4_1:80861299-80861318 Msa0576790:three_prime_UTR 35.0%
GGAAATAGATAACCATGAGA+AGG + chr4_1:80861389-80861408 Msa0576790:three_prime_UTR 35.0%
TCATTCATTATAGTCATCCC+AGG + chr4_1:80861436-80861455 Msa0576790:three_prime_UTR 35.0%
AATCAAAACAGCAACATGGG+AGG + chr4_1:80855327-80855346 Msa0576790:exon 40.0%
! TAACTTTGTGCTGTTCTCAG+GGG - chr4_1:80855400-80855419 None:intergenic 40.0%
! CTTAACTTTGTGCTGTTCTC+AGG - chr4_1:80855402-80855421 None:intergenic 40.0%
AGAAGATGCAGACTATGTTG+AGG + chr4_1:80855467-80855486 Msa0576790:CDS 40.0%
CATGAGAAACAGTCTTTGAC+TGG + chr4_1:80855570-80855589 Msa0576790:CDS 40.0%
!! GAAATCATTTGGTGCTTCAG+TGG + chr4_1:80855611-80855630 Msa0576790:CDS 40.0%
! TATAAAGCAGCTGAAGCGTT+TGG + chr4_1:80855653-80855672 Msa0576790:CDS 40.0%
AAGATAACCGTCAGTTGTCA+CGG - chr4_1:80855823-80855842 None:intergenic 40.0%
CGATCAACAAGATCCAGTTT+AGG + chr4_1:80856176-80856195 Msa0576790:CDS 40.0%
! CTGACCAAAGCTTTGATACT+AGG + chr4_1:80856218-80856237 Msa0576790:CDS 40.0%
TGAGCCTAGTATCAAAGCTT+TGG - chr4_1:80856225-80856244 None:intergenic 40.0%
AGATGCAGATGGAAGAATCA+CGG + chr4_1:80856355-80856374 Msa0576790:CDS 40.0%
CTGGATGTTTGACAGTTTGT+TGG - chr4_1:80856592-80856611 None:intergenic 40.0%
AAACATCCAGAAACAAGCAG+AGG + chr4_1:80856602-80856621 Msa0576790:CDS 40.0%
CATATTCCTCTGCTTGTTTC+TGG - chr4_1:80856611-80856630 None:intergenic 40.0%
GAAACAAGCAGAGGAATATG+CGG + chr4_1:80856611-80856630 Msa0576790:CDS 40.0%
AGATATATCCTGTGTCATCC+GGG - chr4_1:80856659-80856678 None:intergenic 40.0%
GGATGACACAGGATATATCT+TGG + chr4_1:80856659-80856678 Msa0576790:CDS 40.0%
CTCGAGACTCTCTTATTACA+TGG + chr4_1:80856789-80856808 Msa0576790:CDS 40.0%
ATGGACCAGAAGAAACTACA+AGG + chr4_1:80856808-80856827 Msa0576790:CDS 40.0%
TGGACCAGAAGAAACTACAA+GGG + chr4_1:80856809-80856828 Msa0576790:CDS 40.0%
! CAAATGTAGGCCTAAGCTTT+TGG - chr4_1:80856866-80856885 None:intergenic 40.0%
AAAGCTTAGGCCTACATTTG+AGG + chr4_1:80856866-80856885 Msa0576790:CDS 40.0%
AAGCTTAGGCCTACATTTGA+GGG + chr4_1:80856867-80856886 Msa0576790:CDS 40.0%
AGGGAAATCCTATTAAGAGG+TGG + chr4_1:80856886-80856905 Msa0576790:CDS 40.0%
AGATACCAAGTACTTCTTCC+AGG + chr4_1:80856914-80856933 Msa0576790:CDS 40.0%
!! GTTATCCTGGAAGAAGTACT+TGG - chr4_1:80856922-80856941 None:intergenic 40.0%
AGTACTTCTTCCAGGATAAC+TGG + chr4_1:80856922-80856941 Msa0576790:CDS 40.0%
AAAGGCAAATAGGCCTAACA+TGG - chr4_1:80856982-80857001 None:intergenic 40.0%
GATCTGCATATGAAGTGATG+GGG + chr4_1:80857024-80857043 Msa0576790:CDS 40.0%
! TGATGGCCTCAATTTTCACA+AGG + chr4_1:80857181-80857200 Msa0576790:CDS 40.0%
CGATTATAGCAGCTTTCACA+AGG + chr4_1:80857329-80857348 Msa0576790:intron 40.0%
CTGGCAATATCAATTGGTGT+TGG + chr4_1:80857386-80857405 Msa0576790:CDS 40.0%
GATGGTTTCTCTCCGAAAAA+AGG - chr4_1:80857491-80857510 None:intergenic 40.0%
GAGAGAAACCATCAAACTAC+TGG + chr4_1:80857498-80857517 Msa0576790:CDS 40.0%
AGGGGTAACAGGAATTCTAA+TGG + chr4_1:80857541-80857560 Msa0576790:CDS 40.0%
AATGGCAATAGCCTTTACAC+TGG + chr4_1:80857571-80857590 Msa0576790:CDS 40.0%
ATTCCTCCTGAACCTAGTAT+TGG - chr4_1:80857597-80857616 None:intergenic 40.0%
GTTGAAGGGTTTAGGTAGTT+TGG - chr4_1:80857624-80857643 None:intergenic 40.0%
!! GTGAGTTTGTTGAAGGGTTT+AGG - chr4_1:80857632-80857651 None:intergenic 40.0%
AAACCCTTCAACAAACTCAC+AGG + chr4_1:80857632-80857651 Msa0576790:CDS 40.0%
!! GAAACCTGTGAGTTTGTTGA+AGG - chr4_1:80857639-80857658 None:intergenic 40.0%
! TCACAGGTTTCAATGCCTTT+TGG + chr4_1:80857648-80857667 Msa0576790:CDS 40.0%
GAGGTGATGAGAATACCAAA+AGG - chr4_1:80857666-80857685 None:intergenic 40.0%
! TATGCCCTGTTGATTATCCA+TGG + chr4_1:80857698-80857717 Msa0576790:CDS 40.0%
GGTTCCATGGATAATCAACA+GGG - chr4_1:80857705-80857724 None:intergenic 40.0%
TGGTTCCATGGATAATCAAC+AGG - chr4_1:80857706-80857725 None:intergenic 40.0%
CCAAAGTAAGGGTTAACTGA+AGG - chr4_1:80857771-80857790 None:intergenic 40.0%
CCTTCAGTTAACCCTTACTT+TGG + chr4_1:80857768-80857787 Msa0576790:intron 40.0%
TCCCATCACCATTTATGCAT+TGG + chr4_1:80857875-80857894 Msa0576790:CDS 40.0%
CTCCAATGCATAAATGGTGA+TGG - chr4_1:80857880-80857899 None:intergenic 40.0%
CAAGTCTGTGCGAATATTGA+AGG + chr4_1:80857929-80857948 Msa0576790:CDS 40.0%
TTAAAGGTGGCTGTTTATCC+TGG + chr4_1:80858084-80858103 Msa0576790:intron 40.0%
GTTTCTCCACTTGAATGGTA+TGG + chr4_1:80858189-80858208 Msa0576790:intron 40.0%
ATCATTAGGGGCAGAAGTTA+TGG - chr4_1:80858365-80858384 None:intergenic 40.0%
CTAAGAGCTGAATGCTTGAA+AGG + chr4_1:80858666-80858685 Msa0576790:CDS 40.0%
GCAAAAACTGTAGTTGGCTA+CGG + chr4_1:80858783-80858802 Msa0576790:intron 40.0%
ACATGGAACTCACTAGTTGT+GGG - chr4_1:80858848-80858867 None:intergenic 40.0%
AACATGGAACTCACTAGTTG+TGG - chr4_1:80858849-80858868 None:intergenic 40.0%
ACAACTAGTGAGTTCCATGT+TGG + chr4_1:80858848-80858867 Msa0576790:intron 40.0%
ACAGGTGAAGTTAACCAACA+TGG - chr4_1:80858865-80858884 None:intergenic 40.0%
!! TCATGTTAACTTGTGCCCTT+AGG + chr4_1:80859339-80859358 Msa0576790:intron 40.0%
!! CATGTTAACTTGTGCCCTTA+GGG + chr4_1:80859340-80859359 Msa0576790:intron 40.0%
!! AATGTTAACTTGTGCCCTTG+AGG - chr4_1:80859496-80859515 None:intergenic 40.0%
TGGCTGTAGAAAATCTGGAT+TGG - chr4_1:80859556-80859575 None:intergenic 40.0%
AGAGACTTGCATTAGATACC+TGG - chr4_1:80859661-80859680 None:intergenic 40.0%
GCATTAGATACCTGGTAAGA+AGG - chr4_1:80859653-80859672 None:intergenic 40.0%
AGAGACTTGCATTAGATACC+TGG - chr4_1:80859661-80859680 None:intergenic 40.0%
!! CGAGTTAGTATTTTGGAGGA+GGG - chr4_1:80859885-80859904 None:intergenic 40.0%
! CATAGCGCGAGTTAGTATTT+TGG - chr4_1:80859892-80859911 None:intergenic 40.0%
TTCTGAGCCAACTTGAATTG+TGG + chr4_1:80859918-80859937 Msa0576790:intron 40.0%
TTGCCTGACAGATATTTCAC+AGG + chr4_1:80860045-80860064 Msa0576790:intron 40.0%
GGACCATCGATCAAAACTTT+AGG - chr4_1:80860217-80860236 None:intergenic 40.0%
!! GTTTTGATCGATGGTCCATA+TGG + chr4_1:80860220-80860239 Msa0576790:CDS 40.0%
!! GTATGAGGTGGTTTTACTTG+TGG + chr4_1:80860267-80860286 Msa0576790:CDS 40.0%
!! ATGAGGTGGTTTTACTTGTG+GGG + chr4_1:80860269-80860288 Msa0576790:CDS 40.0%
GGTCAATAATTTCAAGGCCA+TGG + chr4_1:80860336-80860355 Msa0576790:CDS 40.0%
! AAACCCATCTTCCTTTTCCA+TGG - chr4_1:80860356-80860375 None:intergenic 40.0%
! AAAGGAAGATGGGTTTGCAA+TGG + chr4_1:80860360-80860379 Msa0576790:CDS 40.0%
ATGGGTTTGCAATGGAAGAA+GGG + chr4_1:80860368-80860387 Msa0576790:CDS 40.0%
!! TCTTTCTGGTTGGTTGTCAT+TGG - chr4_1:80860397-80860416 None:intergenic 40.0%
CACCCCTTTAAACCAATCAA+AGG - chr4_1:80860485-80860504 None:intergenic 40.0%
TTGTAGACAGTTCGCCAATT+GGG - chr4_1:80860688-80860707 None:intergenic 40.0%
TTTGTAGACAGTTCGCCAAT+TGG - chr4_1:80860689-80860708 None:intergenic 40.0%
ACGCATTGCACTTAATCATC+CGG + chr4_1:80860708-80860727 Msa0576790:CDS 40.0%
!!! AATGCAGGGGTATTTTACTG+CGG + chr4_1:80860991-80861010 Msa0576790:intron 40.0%
TTATAGCTGAGTCATCTTGG+TGG - chr4_1:80861164-80861183 None:intergenic 40.0%
CGATTATAGCTGAGTCATCT+TGG - chr4_1:80861167-80861186 None:intergenic 40.0%
ATAGGTTATCAACGAAAGGG+TGG - chr4_1:80861200-80861219 None:intergenic 40.0%
AAAGGACTAAGGTAAACGTG+GGG + chr4_1:80861259-80861278 Msa0576790:three_prime_UTR 40.0%
TAAGGTAAACGTGGGGTAAA+TGG + chr4_1:80861266-80861285 Msa0576790:three_prime_UTR 40.0%
TAAACGTGGGGTAAATGGTT+AGG + chr4_1:80861271-80861290 Msa0576790:three_prime_UTR 40.0%
TAAATGGTTAGGTGGTGAGT+TGG + chr4_1:80861282-80861301 Msa0576790:three_prime_UTR 40.0%
GCTACCAAATACTAAAGGTG+AGG + chr4_1:80861304-80861323 Msa0576790:three_prime_UTR 40.0%
CCTACCTCACCTTTAGTATT+TGG - chr4_1:80861311-80861330 None:intergenic 40.0%
CCAAATACTAAAGGTGAGGT+AGG + chr4_1:80861308-80861327 Msa0576790:three_prime_UTR 40.0%
ATACTAAAGGTGAGGTAGGA+TGG + chr4_1:80861312-80861331 Msa0576790:three_prime_UTR 40.0%
ATGACGACACACTTATGCAA+GGG - chr4_1:80861340-80861359 None:intergenic 40.0%
ATTATAGTCATCCCAGGAGA+AGG + chr4_1:80861442-80861461 Msa0576790:three_prime_UTR 40.0%
TTATAGTCATCCCAGGAGAA+GGG + chr4_1:80861443-80861462 Msa0576790:three_prime_UTR 40.0%
TGGAAGGAAGTAAATCAGGA+GGG + chr4_1:80861469-80861488 Msa0576790:three_prime_UTR 40.0%
GTCAACATCTGTGACAGCTT+TGG - chr4_1:80855436-80855455 None:intergenic 45.0%
AGACTATGTTGAGGTGACCA+TGG + chr4_1:80855476-80855495 Msa0576790:CDS 45.0%
AGAGTCACCTTGAATGTCCA+TGG - chr4_1:80855496-80855515 None:intergenic 45.0%
ACAGAAAGTGACATGGGAGA+AGG + chr4_1:80855543-80855562 Msa0576790:CDS 45.0%
CAGAAAGTGACATGGGAGAA+GGG + chr4_1:80855544-80855563 Msa0576790:CDS 45.0%
AGAAAGTGACATGGGAGAAG+GGG + chr4_1:80855545-80855564 Msa0576790:CDS 45.0%
GTCTTTGACTGGGAACAAGT+TGG + chr4_1:80855581-80855600 Msa0576790:CDS 45.0%
ACCAGAACCAGCAAAACGAT+TGG + chr4_1:80855689-80855708 Msa0576790:CDS 45.0%
!!! TCCAATCGTTTTGCTGGTTC+TGG - chr4_1:80855693-80855712 None:intergenic 45.0%
AACCAGCAAAACGATTGGAG+AGG + chr4_1:80855694-80855713 Msa0576790:CDS 45.0%
AAGCTTACCGTGACAACTGA+CGG + chr4_1:80855813-80855832 Msa0576790:CDS 45.0%
! CATTTAGCAAAGAGAGTGCG+AGG - chr4_1:80855846-80855865 None:intergenic 45.0%
AGATCCAGTTTAGGGAGTTC+TGG + chr4_1:80856185-80856204 Msa0576790:CDS 45.0%
GATCCAGTTTAGGGAGTTCT+GGG + chr4_1:80856186-80856205 Msa0576790:CDS 45.0%
AGGGTTGACAAAGATGCAGA+TGG + chr4_1:80856344-80856363 Msa0576790:intron 45.0%
!! GTTTGACAGTTTGTTGGCAG+TGG - chr4_1:80856586-80856605 None:intergenic 45.0%
! GGAATATGCGGCTTTGATCA+TGG + chr4_1:80856623-80856642 Msa0576790:CDS 45.0%
GATCATGGAAGAACTAGACC+CGG + chr4_1:80856638-80856657 Msa0576790:CDS 45.0%
GGACCAGAAGAAACTACAAG+GGG + chr4_1:80856810-80856829 Msa0576790:CDS 45.0%
TCTCCCCTTGTAGTTTCTTC+TGG - chr4_1:80856816-80856835 None:intergenic 45.0%
! TTTGGCTTAGCATTTGGCTC+AGG - chr4_1:80856848-80856867 None:intergenic 45.0%
AATCCACAGAGCAAATACCC+AGG - chr4_1:80856955-80856974 None:intergenic 45.0%
TGGGTATTTGCTCTGTGGAT+TGG + chr4_1:80856954-80856973 Msa0576790:CDS 45.0%
ACTGTGTGTGCATGGCAAAA+GGG + chr4_1:80857048-80857067 Msa0576790:CDS 45.0%
TTTGCCGAAACACCATCACT+TGG + chr4_1:80857117-80857136 Msa0576790:CDS 45.0%
! TGAGCCAAGTGATGGTGTTT+CGG - chr4_1:80857124-80857143 None:intergenic 45.0%
!! AGGAACAAAAGCACCTAGCT+TGG - chr4_1:80857156-80857175 None:intergenic 45.0%
TTGCTTGCATGAAGAATGCG+AGG - chr4_1:80857446-80857465 None:intergenic 45.0%
AAATCATGGGAAGGGGTAAC+AGG + chr4_1:80857530-80857549 Msa0576790:CDS 45.0%
!! CCTAGTATTGGCCAGTGTAA+AGG - chr4_1:80857585-80857604 None:intergenic 45.0%
CCTTTACACTGGCCAATACT+AGG + chr4_1:80857582-80857601 Msa0576790:CDS 45.0%
GGGCATACACAATGATGAAG+AGG - chr4_1:80857685-80857704 None:intergenic 45.0%
!! CTGCTGTTTCTCCACTTGAA+TGG + chr4_1:80858184-80858203 Msa0576790:CDS 45.0%
GGGGCAGAAGTTATGGAAAA+TGG - chr4_1:80858358-80858377 None:intergenic 45.0%
AAGTCCACTCTGTCCATTGA+TGG - chr4_1:80858646-80858665 None:intergenic 45.0%
TGAAAGGAGATAACAGCCCA+AGG + chr4_1:80858682-80858701 Msa0576790:CDS 45.0%
!! CTCCTTAACTTGTGCCCTAA+GGG - chr4_1:80859357-80859376 None:intergenic 45.0%
TCTCCAGCCAAACTCTTTGT+TGG + chr4_1:80859592-80859611 Msa0576790:intron 45.0%
CCAAACTCTTTGTTGGCGTA+GGG + chr4_1:80859599-80859618 Msa0576790:intron 45.0%
!! GCGAGTTAGTATTTTGGAGG+AGG - chr4_1:80859886-80859905 None:intergenic 45.0%
!! AGCGCGAGTTAGTATTTTGG+AGG - chr4_1:80859889-80859908 None:intergenic 45.0%
CCACCTGTGAAATATCTGTC+AGG - chr4_1:80860051-80860070 None:intergenic 45.0%
CCTGACAGATATTTCACAGG+TGG + chr4_1:80860048-80860067 Msa0576790:intron 45.0%
! ACAAGACTACAGGGAGTATG+AGG + chr4_1:80860252-80860271 Msa0576790:CDS 45.0%
AAGGCCATGGAAAAGGAAGA+TGG + chr4_1:80860349-80860368 Msa0576790:CDS 45.0%
AGGCCATGGAAAAGGAAGAT+GGG + chr4_1:80860350-80860369 Msa0576790:CDS 45.0%
! GATGGGTTTGCAATGGAAGA+AGG + chr4_1:80860367-80860386 Msa0576790:CDS 45.0%
CAACCAACCAGAAAGACTCT+AGG + chr4_1:80860401-80860420 Msa0576790:CDS 45.0%
! GAACCTAGAGTCTTTCTGGT+TGG - chr4_1:80860407-80860426 None:intergenic 45.0%
CACTGAACCTAGAGTCTTTC+TGG - chr4_1:80860411-80860430 None:intergenic 45.0%
! CAGGAGGGCATACTTCTATT+GGG + chr4_1:80860441-80860460 Msa0576790:CDS 45.0%
TATTGGGTGACAAGAGAGCA+GGG + chr4_1:80860457-80860476 Msa0576790:CDS 45.0%
GGTGATGAATGATGTAGCTG+AGG + chr4_1:80860501-80860520 Msa0576790:CDS 45.0%
GATGAATGATGTAGCTGAGG+AGG + chr4_1:80860504-80860523 Msa0576790:CDS 45.0%
ATGTAGCTGAGGAGGATAGA+AGG + chr4_1:80860512-80860531 Msa0576790:CDS 45.0%
TGTAGCTGAGGAGGATAGAA+GGG + chr4_1:80860513-80860532 Msa0576790:CDS 45.0%
! AATCATCCGGAAGCACAAGT+TGG + chr4_1:80860721-80860740 Msa0576790:CDS 45.0%
AACTCACCAACTTGTGCTTC+CGG - chr4_1:80860730-80860749 None:intergenic 45.0%
!! AGTTGGTGAGTTCCCACTTA+TGG + chr4_1:80860738-80860757 Msa0576790:intron 45.0%
!!! ATGCAGGGGTATTTTACTGC+GGG + chr4_1:80860992-80861011 Msa0576790:intron 45.0%
TGACGACACACTTATGCAAG+GGG - chr4_1:80861339-80861358 None:intergenic 45.0%
CATGACGACACACTTATGCA+AGG - chr4_1:80861341-80861360 None:intergenic 45.0%
GACCTGGAAGGAAGTAAATC+AGG + chr4_1:80861465-80861484 Msa0576790:three_prime_UTR 45.0%
CTCCTGATTTACTTCCTTCC+AGG - chr4_1:80861470-80861489 None:intergenic 45.0%
CTGGAAGGAAGTAAATCAGG+AGG + chr4_1:80861468-80861487 Msa0576790:three_prime_UTR 45.0%
!! ATTCATAAAAAAATTAATAT+TGG - chr4_1:80859697-80859716 None:intergenic 5.0%
GAGGTGACCATGGACATTCA+AGG + chr4_1:80855486-80855505 Msa0576790:CDS 50.0%
! GTCCTCTCCAATCGTTTTGC+TGG - chr4_1:80855699-80855718 None:intergenic 50.0%
AGCAAGACTGATGTTGGTGC+AGG + chr4_1:80855762-80855781 Msa0576790:CDS 50.0%
AGACTGATGTTGGTGCAGGA+TGG + chr4_1:80855766-80855785 Msa0576790:CDS 50.0%
ATACTCTTGCTCGGCAGAGA+GGG + chr4_1:80856140-80856159 Msa0576790:CDS 50.0%
AGTCCCAGAACTCCCTAAAC+TGG - chr4_1:80856192-80856211 None:intergenic 50.0%
TGCAGATGGAAGAATCACGG+AGG + chr4_1:80856358-80856377 Msa0576790:CDS 50.0%
AGGATCTTCGCCAGTTATCC+TGG - chr4_1:80856935-80856954 None:intergenic 50.0%
AGGATAACTGGCGAAGATCC+TGG + chr4_1:80856934-80856953 Msa0576790:CDS 50.0%
GGATAACTGGCGAAGATCCT+GGG + chr4_1:80856935-80856954 Msa0576790:CDS 50.0%
GATCCTGGGTATTTGCTCTG+TGG + chr4_1:80856949-80856968 Msa0576790:CDS 50.0%
!! CTGTGGATTGGTGCCATGTT+AGG + chr4_1:80856966-80856985 Msa0576790:CDS 50.0%
CACTGTGTGTGCATGGCAAA+AGG + chr4_1:80857047-80857066 Msa0576790:CDS 50.0%
CTGTGTGTGCATGGCAAAAG+GGG + chr4_1:80857049-80857068 Msa0576790:CDS 50.0%
! GTGATGGTGTTTCGGCAAAC+AGG - chr4_1:80857116-80857135 None:intergenic 50.0%
GAAACACCATCACTTGGCTC+AGG + chr4_1:80857123-80857142 Msa0576790:CDS 50.0%
CCTATTCCTGAGCCAAGTGA+TGG - chr4_1:80857132-80857151 None:intergenic 50.0%
CCATCACTTGGCTCAGGAAT+AGG + chr4_1:80857129-80857148 Msa0576790:CDS 50.0%
CTCAGGAATAGGACCAAGCT+AGG + chr4_1:80857140-80857159 Msa0576790:CDS 50.0%
CACTGGCCAATACTAGGTTC+AGG + chr4_1:80857588-80857607 Msa0576790:CDS 50.0%
TGGCCAATACTAGGTTCAGG+AGG + chr4_1:80857591-80857610 Msa0576790:CDS 50.0%
! GGCATGTGTCAAGTTGCCAT+GGG - chr4_1:80859185-80859204 None:intergenic 50.0%
TGCCCTTAGGGCACAAGTTA+AGG + chr4_1:80859352-80859371 Msa0576790:intron 50.0%
!! GCTCCTTAACTTGTGCCCTA+AGG - chr4_1:80859358-80859377 None:intergenic 50.0%
ACGCCAACAAAGAGTTTGGC+TGG - chr4_1:80859598-80859617 None:intergenic 50.0%
GCCAAACTCTTTGTTGGCGT+AGG + chr4_1:80859598-80859617 Msa0576790:intron 50.0%
CCCTACGCCAACAAAGAGTT+TGG - chr4_1:80859602-80859621 None:intergenic 50.0%
CCTGGTAAGAAGCCCTTCTA+AGG - chr4_1:80859643-80859662 None:intergenic 50.0%
CCTTAGAAGGGCTTCTTACC+AGG + chr4_1:80859640-80859659 Msa0576790:intron 50.0%
CTGGTAAGAAGGCCCTTCTA+AGG - chr4_1:80859749-80859768 None:intergenic 50.0%
CTTAGAAGGGCCTTCTTACC+AGG + chr4_1:80859747-80859766 Msa0576790:intron 50.0%
!! TACTCCCTGTAGTCTTGTGC+TGG - chr4_1:80860250-80860269 None:intergenic 50.0%
! AGACTACAGGGAGTATGAGG+TGG + chr4_1:80860255-80860274 Msa0576790:CDS 50.0%
!! GTGGTTTTACTTGTGGGGCT+GGG + chr4_1:80860274-80860293 Msa0576790:CDS 50.0%
TTACTTGTGGGGCTGGGAAT+AGG + chr4_1:80860280-80860299 Msa0576790:CDS 50.0%
TACTTGTGGGGCTGGGAATA+GGG + chr4_1:80860281-80860300 Msa0576790:CDS 50.0%
GGTTCAGTGACTTCAAGACC+AGG + chr4_1:80860422-80860441 Msa0576790:CDS 50.0%
TCAGTGACTTCAAGACCAGG+AGG + chr4_1:80860425-80860444 Msa0576790:CDS 50.0%
CAGTGACTTCAAGACCAGGA+GGG + chr4_1:80860426-80860445 Msa0576790:CDS 50.0%
! CCAATAGAAGTATGCCCTCC+TGG - chr4_1:80860443-80860462 None:intergenic 50.0%
! CCAGGAGGGCATACTTCTAT+TGG + chr4_1:80860440-80860459 Msa0576790:CDS 50.0%
CTATTGGGTGACAAGAGAGC+AGG + chr4_1:80860456-80860475 Msa0576790:CDS 50.0%
GAGAGCAGGGTTCCTTTGAT+TGG + chr4_1:80860470-80860489 Msa0576790:CDS 50.0%
GTAGCTGAGGAGGATAGAAG+GGG + chr4_1:80860514-80860533 Msa0576790:CDS 50.0%
TGCACCAGCGTTTACGAACA+GGG + chr4_1:80860559-80860578 Msa0576790:CDS 50.0%
ATCACCCTGTTCGTAAACGC+TGG - chr4_1:80860566-80860585 None:intergenic 50.0%
TCGCTCTGCTCTTATCGCTA+TGG + chr4_1:80860588-80860607 Msa0576790:CDS 50.0%
AAACCATGCAAAGCACGGTG+TGG + chr4_1:80860621-80860640 Msa0576790:CDS 50.0%
ATGAGACATGACACGAGTGC+CGG - chr4_1:80860656-80860675 None:intergenic 50.0%
GAGGATAACAGTGGAAGGTG+TGG + chr4_1:80861124-80861143 Msa0576790:three_prime_UTR 50.0%
TAGCTGAGTCATCTTGGTGG+AGG - chr4_1:80861161-80861180 None:intergenic 50.0%
ACGTGGGGTAAATGGTTAGG+TGG + chr4_1:80861274-80861293 Msa0576790:three_prime_UTR 50.0%
GACGACACACTTATGCAAGG+GGG - chr4_1:80861338-80861357 None:intergenic 50.0%
AGCATGAGCCACTGCAGACT+TGG - chr4_1:80855721-80855740 None:intergenic 55.0%
GATACTCTTGCTCGGCAGAG+AGG + chr4_1:80856139-80856158 Msa0576790:CDS 55.0%
GAACTAGACCCGGATGACAC+AGG + chr4_1:80856648-80856667 Msa0576790:CDS 55.0%
! TCTGTCCATTGATGGCTGGC+TGG - chr4_1:80858638-80858657 None:intergenic 55.0%
! CCACTCTGTCCATTGATGGC+TGG - chr4_1:80858642-80858661 None:intergenic 55.0%
CCAGCCATCAATGGACAGAG+TGG + chr4_1:80858639-80858658 Msa0576790:CDS 55.0%
! GGGCATGTGTCAAGTTGCCA+TGG - chr4_1:80859186-80859205 None:intergenic 55.0%
! TCTTGTGCTGGCGCTCCATA+TGG - chr4_1:80860238-80860257 None:intergenic 55.0%
AGCGCCAGCACAAGACTACA+GGG + chr4_1:80860243-80860262 Msa0576790:CDS 55.0%
!! GGTGGTTTTACTTGTGGGGC+TGG + chr4_1:80860273-80860292 Msa0576790:CDS 55.0%
ACTTGTGGGGCTGGGAATAG+GGG + chr4_1:80860282-80860301 Msa0576790:CDS 55.0%
CTGCACCAGCGTTTACGAAC+AGG + chr4_1:80860558-80860577 Msa0576790:CDS 55.0%
CATCCACACCGTGCTTTGCA+TGG - chr4_1:80860627-80860646 None:intergenic 55.0%
CACGGTGTGGATGTTGTGTC+CGG + chr4_1:80860634-80860653 Msa0576790:CDS 55.0%
CGATAGCTGACGAAGCTCGT+GGG - chr4_1:80861031-80861050 None:intergenic 55.0%
ACGATAGCTGACGAAGCTCG+TGG - chr4_1:80861032-80861051 None:intergenic 55.0%
CGAGCTTCGTCAGCTATCGT+TGG + chr4_1:80861032-80861051 Msa0576790:CDS 55.0%
GAGTCATCTTGGTGGAGGAC+TGG - chr4_1:80861156-80861175 None:intergenic 55.0%
GGAGAGGACCAAGTCTGCAG+TGG + chr4_1:80855710-80855729 Msa0576790:CDS 60.0%
GCAGTGGCTCATGCTCTCAC+TGG + chr4_1:80855726-80855745 Msa0576790:CDS 60.0%
GCTCGGCAGAGAGGGATTCA+AGG + chr4_1:80856148-80856167 Msa0576790:CDS 60.0%
CGGCAGAGAGGGATTCAAGG+AGG + chr4_1:80856151-80856170 Msa0576790:CDS 60.0%
! GTTTGTTGGCAGTGGCGCTC+AGG - chr4_1:80856578-80856597 None:intergenic 60.0%
!! GATGGGGCACTGTGTGTGCA+TGG + chr4_1:80857040-80857059 Msa0576790:CDS 60.0%
GCTTGCCAGCCAGCCATCAA+TGG + chr4_1:80858630-80858649 Msa0576790:CDS 60.0%
GAGCGCCAGCACAAGACTAC+AGG + chr4_1:80860242-80860261 Msa0576790:CDS 60.0%
CTGACGAAGCTCGTGGGTCA+GGG - chr4_1:80861025-80861044 None:intergenic 60.0%
TCATCCCAGGAGAAGGGACC+TGG + chr4_1:80861449-80861468 Msa0576790:three_prime_UTR 60.0%
CCTTCCAGGTCCCTTCTCCT+GGG - chr4_1:80861456-80861475 None:intergenic 60.0%
TCCTTCCAGGTCCCTTCTCC+TGG - chr4_1:80861457-80861476 None:intergenic 60.0%
AGCTCGTGGGTCAGGGTGGA+TGG - chr4_1:80861018-80861037 None:intergenic 65.0%
ACGAAGCTCGTGGGTCAGGG+TGG - chr4_1:80861022-80861041 None:intergenic 65.0%
GCTGACGAAGCTCGTGGGTC+AGG - chr4_1:80861026-80861045 None:intergenic 65.0%
CCCAGGAGAAGGGACCTGGA+AGG + chr4_1:80861453-80861472 Msa0576790:three_prime_UTR 65.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 80855243 80861634 80855243 ID=Msa0576790;Name=Msa0576790
chr4_1 mRNA 80855243 80861634 80855243 ID=Msa0576790-mRNA-1;Parent=Msa0576790;Name=Msa0576790-mRNA-1;_AED=0.09;_eAED=0.09;_QI=99|1|1|1|1|1|12|527|898
chr4_1 exon 80855243 80855870 80855243 ID=Msa0576790-mRNA-1:exon:29025;Parent=Msa0576790-mRNA-1
chr4_1 exon 80856098 80856260 80856098 ID=Msa0576790-mRNA-1:exon:29026;Parent=Msa0576790-mRNA-1
chr4_1 exon 80856346 80856394 80856346 ID=Msa0576790-mRNA-1:exon:29027;Parent=Msa0576790-mRNA-1
chr4_1 exon 80856567 80856680 80856567 ID=Msa0576790-mRNA-1:exon:29028;Parent=Msa0576790-mRNA-1
chr4_1 exon 80856780 80857202 80856780 ID=Msa0576790-mRNA-1:exon:29029;Parent=Msa0576790-mRNA-1
chr4_1 exon 80857377 80857760 80857377 ID=Msa0576790-mRNA-1:exon:29030;Parent=Msa0576790-mRNA-1
chr4_1 exon 80857855 80857950 80857855 ID=Msa0576790-mRNA-1:exon:29031;Parent=Msa0576790-mRNA-1
chr4_1 exon 80858090 80858205 80858090 ID=Msa0576790-mRNA-1:exon:29032;Parent=Msa0576790-mRNA-1
chr4_1 exon 80858351 80858453 80858351 ID=Msa0576790-mRNA-1:exon:29033;Parent=Msa0576790-mRNA-1
chr4_1 exon 80858630 80858703 80858630 ID=Msa0576790-mRNA-1:exon:29034;Parent=Msa0576790-mRNA-1
chr4_1 exon 80860207 80860742 80860207 ID=Msa0576790-mRNA-1:exon:29035;Parent=Msa0576790-mRNA-1
chr4_1 exon 80860998 80861634 80860998 ID=Msa0576790-mRNA-1:exon:29036;Parent=Msa0576790-mRNA-1
chr4_1 five_prime_UTR 80855243 80855341 80855243 ID=Msa0576790-mRNA-1:five_prime_utr;Parent=Msa0576790-mRNA-1
chr4_1 CDS 80855342 80855870 80855342 ID=Msa0576790-mRNA-1:cds;Parent=Msa0576790-mRNA-1
chr4_1 CDS 80856098 80856260 80856098 ID=Msa0576790-mRNA-1:cds;Parent=Msa0576790-mRNA-1
chr4_1 CDS 80856346 80856394 80856346 ID=Msa0576790-mRNA-1:cds;Parent=Msa0576790-mRNA-1
chr4_1 CDS 80856567 80856680 80856567 ID=Msa0576790-mRNA-1:cds;Parent=Msa0576790-mRNA-1
chr4_1 CDS 80856780 80857202 80856780 ID=Msa0576790-mRNA-1:cds;Parent=Msa0576790-mRNA-1
chr4_1 CDS 80857377 80857760 80857377 ID=Msa0576790-mRNA-1:cds;Parent=Msa0576790-mRNA-1
chr4_1 CDS 80857855 80857950 80857855 ID=Msa0576790-mRNA-1:cds;Parent=Msa0576790-mRNA-1
chr4_1 CDS 80858090 80858205 80858090 ID=Msa0576790-mRNA-1:cds;Parent=Msa0576790-mRNA-1
chr4_1 CDS 80858351 80858453 80858351 ID=Msa0576790-mRNA-1:cds;Parent=Msa0576790-mRNA-1
chr4_1 CDS 80858630 80858703 80858630 ID=Msa0576790-mRNA-1:cds;Parent=Msa0576790-mRNA-1
chr4_1 CDS 80860207 80860742 80860207 ID=Msa0576790-mRNA-1:cds;Parent=Msa0576790-mRNA-1
chr4_1 CDS 80860998 80861107 80860998 ID=Msa0576790-mRNA-1:cds;Parent=Msa0576790-mRNA-1
chr4_1 three_prime_UTR 80861108 80861634 80861108 ID=Msa0576790-mRNA-1:three_prime_utr;Parent=Msa0576790-mRNA-1
Gene Sequence

>Msa0576790

ATGGGAGGATCTTCTGCAGATCTTCATCATCATGAATCAAATATAGAACTCATTGCCCCTGAGAACAGCACAAAGTTAAGCACTGCTGAGTCCAAAGCTGTCACAGATGTTGACCATAACAAAGAAGAAGATGCAGACTATGTTGAGGTGACCATGGACATTCAAGGTGACTCTGTTGCCTTACACAGTGTGAAAACTGTAACAGAAAGTGACATGGGAGAAGGGGAACATGAGAAACAGTCTTTGACTGGGAACAAGTTGGAGAAGAAGAAATCATTTGGTGCTTCAGTGGTTCAAAATGCTACTATTCGTATAAAGCAGCTGAAGCGTTTGGCATCGTTTTCGAAACCAGAACCAGCAAAACGATTGGAGAGGACCAAGTCTGCAGTGGCTCATGCTCTCACTGGACTCAAGTTTATCAGCAAGACTGATGTTGGTGCAGGATGGTCTGAAGTTGAGAAAGTGTTTGATAAGCTTACCGTGACAACTGACGGTTATCTTCCTCGCACTCTCTTTGCTAAATGCATAGGATTGAATGAAGAGTCAAAGGCCTATGCTGAGATGCTTTTTGATACTCTTGCTCGGCAGAGAGGGATTCAAGGAGGTTCGATCAACAAGATCCAGTTTAGGGAGTTCTGGGACTGTATTTCTGACCAAAGCTTTGATACTAGGCTCAAAATATTCTTTGACATGGTTGACAAAGATGCAGATGGAAGAATCACGGAGGAAGAGATAAAAGATATTATATGCCTGAGCGCCACTGCCAACAAACTGTCAAACATCCAGAAACAAGCAGAGGAATATGCGGCTTTGATCATGGAAGAACTAGACCCGGATGACACAGGATATATCTTGATAGGCAATCTCGAGACTCTCTTATTACATGGACCAGAAGAAACTACAAGGGGAGAAAGTAAGTACCTGAGCCAAATGCTAAGCCAAAAGCTTAGGCCTACATTTGAGGGAAATCCTATTAAGAGGTGGTATAGAGATACCAAGTACTTCTTCCAGGATAACTGGCGAAGATCCTGGGTATTTGCTCTGTGGATTGGTGCCATGTTAGGCCTATTTGCCTTTAAATTTGTGCAATATAGGAGAAGATCTGCATATGAAGTGATGGGGCACTGTGTGTGCATGGCAAAAGGGGCTGCTGAAACACTTAAATTGAACATGGCCATTATCTTATTGCCTGTTTGCCGAAACACCATCACTTGGCTCAGGAATAGGACCAAGCTAGGTGCTTTTGTTCCTTTTGATGATGGCCTCAATTTTCACAAGATGATAGCTCTGGCAATATCAATTGGTGTTGGTATACATGCTATTTATCATCTTGTTTGTGATTTTCCTCGCATTCTTCATGCAAGCAATGAAAAGTACAAGCTGATTGAGCCTTTTTTCGGAGAGAAACCATCAAACTACTGGCATTTTGTCAAATCATGGGAAGGGGTAACAGGAATTCTAATGGTTGTGCTAATGGCAATAGCCTTTACACTGGCCAATACTAGGTTCAGGAGGAATCGCACCAAACTACCTAAACCCTTCAACAAACTCACAGGTTTCAATGCCTTTTGGTATTCTCATCACCTCTTCATCATTGTGTATGCCCTGTTGATTATCCATGGAACCAAACTTTACTTGACTAAGGAATGGAACCATAAAACAACTTGGATGTATCTGGCTATTCCCATCACCATTTATGCATTGGAGAGACTTATTAGAGCACTTAGATCAAGCATCAAGTCTGTGCGAATATTGAAGGTGGCTGTTTATCCTGGAAATGTGTTGGCAATTAATATGTCAAAGCCTCAAGGATTTAGCTATAAGAGTGGACAGTACATGCTTGTCAATTGTGCTGCTGTTTCTCCACTTGAATGGCATCCATTTTCCATAACTTCTGCCCCTAATGATGATTACCTTAGTGTTCATATTAAAATACTTGGTGATTGGACTAGAAGTCTGAAAACCAAATTCTCACAGGCTTGCCAGCCAGCCATCAATGGACAGAGTGGACTTCTAAGAGCTGAATGCTTGAAAGGAGATAACAGCCCAAGTACTTTCCCTAAAGTTTTGATCGATGGTCCATATGGAGCGCCAGCACAAGACTACAGGGAGTATGAGGTGGTTTTACTTGTGGGGCTGGGAATAGGGGCTACCCCAATGATAAGTATACTAAAGGACATGGTCAATAATTTCAAGGCCATGGAAAAGGAAGATGGGTTTGCAATGGAAGAAGGGTCACCAATGACAACCAACCAGAAAGACTCTAGGTTCAGTGACTTCAAGACCAGGAGGGCATACTTCTATTGGGTGACAAGAGAGCAGGGTTCCTTTGATTGGTTTAAAGGGGTGATGAATGATGTAGCTGAGGAGGATAGAAGGGGATTGATTGAGCTACACAGCTACTGCACCAGCGTTTACGAACAGGGTGATGCTCGCTCTGCTCTTATCGCTATGGTGCAGTCTATAAACCATGCAAAGCACGGTGTGGATGTTGTGTCCGGCACTCGTGTCATGTCTCATTTTGCTAAACCCAATTGGCGAACTGTCTACAAACGCATTGCACTTAATCATCCGGAAGCACAAGTTGGGGTATTTTACTGCGGGCCATCCACCCTGACCCACGAGCTTCGTCAGCTATCGTTGGATTTCTCTCACAACACATCAACCAAATTCGACTTTCATAAAGAAAATTTCTGA
Protein sequence

>Msa0576790

MGGSSADLHHHESNIELIAPENSTKLSTAESKAVTDVDHNKEEDADYVEVTMDIQGDSVALHSVKTVTESDMGEGEHEKQSLTGNKLEKKKSFGASVVQNATIRIKQLKRLASFSKPEPAKRLERTKSAVAHALTGLKFISKTDVGAGWSEVEKVFDKLTVTTDGYLPRTLFAKCIGLNEESKAYAEMLFDTLARQRGIQGGSINKIQFREFWDCISDQSFDTRLKIFFDMVDKDADGRITEEEIKDIICLSATANKLSNIQKQAEEYAALIMEELDPDDTGYILIGNLETLLLHGPEETTRGESKYLSQMLSQKLRPTFEGNPIKRWYRDTKYFFQDNWRRSWVFALWIGAMLGLFAFKFVQYRRRSAYEVMGHCVCMAKGAAETLKLNMAIILLPVCRNTITWLRNRTKLGAFVPFDDGLNFHKMIALAISIGVGIHAIYHLVCDFPRILHASNEKYKLIEPFFGEKPSNYWHFVKSWEGVTGILMVVLMAIAFTLANTRFRRNRTKLPKPFNKLTGFNAFWYSHHLFIIVYALLIIHGTKLYLTKEWNHKTTWMYLAIPITIYALERLIRALRSSIKSVRILKVAVYPGNVLAINMSKPQGFSYKSGQYMLVNCAAVSPLEWHPFSITSAPNDDYLSVHIKILGDWTRSLKTKFSQACQPAINGQSGLLRAECLKGDNSPSTFPKVLIDGPYGAPAQDYREYEVVLLVGLGIGATPMISILKDMVNNFKAMEKEDGFAMEEGSPMTTNQKDSRFSDFKTRRAYFYWVTREQGSFDWFKGVMNDVAEEDRRGLIELHSYCTSVYEQGDARSALIAMVQSINHAKHGVDVVSGTRVMSHFAKPNWRTVYKRIALNHPEAQVGVFYCGPSTLTHELRQLSLDFSHNTSTKFDFHKENF*