AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0706230

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0706230 MtrunA17_Chr8g0385411 98.218 898 16 0 1 898 1 898 0.0 1853
Msa0706230 MtrunA17_Chr3g0131401 71.460 918 228 9 9 898 12 923 0.0 1374
Msa0706230 MtrunA17_Chr1g0192121 61.512 860 306 8 42 898 48 885 0.0 1107
Msa0706230 MtrunA17_Chr3g0131381 61.926 893 304 10 35 898 32 917 0.0 1102
Msa0706230 MtrunA17_Chr7g0272591 61.778 866 292 12 42 898 60 895 0.0 1084
Msa0706230 MtrunA17_Chr3g0131361 57.283 920 337 17 14 898 12 910 0.0 1044
Msa0706230 MtrunA17_Chr8g0387591 58.407 791 307 10 122 898 162 944 0.0 947
Msa0706230 MtrunA17_Chr2g0301511 47.859 911 398 19 38 898 48 931 0.0 830
Msa0706230 MtrunA17_Chr7g0238371 48.808 797 375 13 122 898 68 851 0.0 776
Msa0706230 MtrunA17_Chr4g0061441 44.416 779 385 12 131 898 89 830 0.0 682
Msa0706230 MtrunA17_Chr1g0202731 26.724 232 131 6 508 737 262 456 1.52e-19 94.0
Msa0706230 MtrunA17_Chr2g0291481 27.602 221 122 5 520 732 293 483 1.54e-19 94.0
Msa0706230 MtrunA17_Chr1g0202741 27.155 232 130 6 508 737 257 451 1.25e-18 91.3
Msa0706230 MtrunA17_Chr4g0058571 27.014 211 123 6 520 727 280 462 2.47e-17 87.0
Msa0706230 MtrunA17_Chr8g0348531 26.638 229 112 5 513 728 274 459 1.41e-16 84.7
Msa0706230 MtrunA17_Chr8g0348521 28.182 220 119 7 520 733 268 454 1.69e-16 84.3
Msa0706230 MtrunA17_Chr8g0349071 27.358 212 118 6 520 728 37 215 1.70e-16 81.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0706230 AT5G51060.1 63.470 876 296 10 35 898 42 905 0.0 1143
Msa0706230 AT5G47910.1 60.135 888 332 8 19 898 48 921 0.0 1105
Msa0706230 AT5G07390.1 60.162 866 331 9 43 898 41 902 0.0 1060
Msa0706230 AT4G25090.1 57.856 821 315 9 94 898 44 849 0.0 999
Msa0706230 AT4G25090.2 57.843 816 311 9 94 898 44 837 0.0 991
Msa0706230 AT1G09090.2 55.041 863 332 14 44 898 29 843 0.0 972
Msa0706230 AT5G07390.2 56.413 842 303 12 43 865 41 837 0.0 932
Msa0706230 AT1G64060.1 52.355 913 369 14 44 898 40 944 0.0 921
Msa0706230 AT1G19230.2 48.541 857 376 13 86 898 117 952 0.0 803
Msa0706230 AT4G11230.1 51.810 801 346 13 122 898 157 941 0.0 797
Msa0706230 AT1G19230.1 48.645 849 361 13 86 898 117 926 0.0 796
Msa0706230 AT5G60010.1 47.428 797 395 11 121 898 95 886 0.0 751
Msa0706230 AT3G45810.1 44.406 858 427 14 80 898 66 912 0.0 722
Msa0706230 AT1G09090.1 53.440 625 247 10 44 660 29 617 0.0 678
Msa0706230 AT5G49740.1 30.222 225 124 7 520 739 291 487 2.54e-21 100
Msa0706230 AT5G49730.1 29.464 224 127 6 520 739 282 478 3.57e-21 99.8
Msa0706230 AT5G49740.2 30.222 225 124 7 520 739 291 487 3.58e-21 99.0
Msa0706230 AT5G49740.3 30.222 225 124 7 520 739 291 487 3.77e-21 99.8
Msa0706230 AT5G49730.2 29.464 224 127 6 520 739 282 478 6.57e-21 98.2
Msa0706230 AT5G50160.2 28.194 227 125 7 508 729 74 267 2.94e-20 96.3
Msa0706230 AT5G50160.1 28.194 227 125 7 508 729 253 446 1.08e-19 95.1
Msa0706230 AT5G23990.1 27.236 246 128 7 486 728 196 393 1.61e-19 94.4
Msa0706230 AT1G01580.2 25.100 251 143 7 481 728 334 542 2.16e-19 94.4
Msa0706230 AT5G23990.3 27.236 246 128 7 486 728 106 303 2.31e-19 93.6
Msa0706230 AT1G01580.1 25.100 251 143 7 481 728 256 464 2.44e-19 94.0
Msa0706230 AT5G23990.2 27.236 246 128 7 486 728 238 435 6.70e-19 92.4
Msa0706230 AT1G01590.1 28.761 226 119 7 508 727 267 456 7.38e-18 89.0
Msa0706230 AT5G23980.1 26.636 214 119 5 520 730 259 437 7.98e-18 89.0
Msa0706230 AT1G23020.2 26.415 212 120 6 520 728 300 478 7.55e-16 82.8
Msa0706230 AT1G23020.1 26.415 212 120 6 520 728 299 477 8.43e-16 82.4
Msa0706230 AT1G23020.5 26.415 212 120 6 520 728 299 477 8.43e-16 82.4
Msa0706230 AT1G23020.4 26.415 212 120 6 520 728 276 454 9.87e-16 82.4
Msa0706230 AT1G23020.3 26.415 212 120 6 520 728 276 454 9.87e-16 82.4
Msa0706230 AT1G23020.6 26.415 212 120 6 520 728 277 455 1.01e-15 82.4
Msa0706230 AT1G23020.7 26.415 212 120 6 520 728 273 451 1.04e-15 82.0

Find 285 sgRNAs with CRISPR-Local

Find 457 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATATTCCTCTGCTTGTTTC+TGG 0.062576 4_4:-79195810 None:intergenic
CCTATATTGCACAAATTTAA+AGG 0.091637 4_4:-79196199 None:intergenic
CACTGAACCTAGAGTCTTTC+TGG 0.129040 4_4:-79199598 None:intergenic
TAAATTTAATTAATTATTAA+AGG 0.166907 4_4:+79200557 Msa0706230:three_prime_UTR
AATATTCACCTGTGAGAATT+TGG 0.174604 4_4:-79197643 None:intergenic
CCTACCTCACCTTTAGTATT+TGG 0.192695 4_4:-79200498 None:intergenic
TTACTTGTGGGGCTGGGAAT+AGG 0.193778 4_4:+79199470 Msa0706230:CDS
TTCTTTATGAAAGTCGAATT+TGG 0.208661 4_4:-79200266 None:intergenic
TCCTTCCAGGTCCCTTCTCC+TGG 0.232557 4_4:-79200644 None:intergenic
CTGCATCTTCTTCTTTGTTA+TGG 0.247298 4_4:-79194657 None:intergenic
CTCCTGATTTACTTCCTTCC+AGG 0.249204 4_4:-79200657 None:intergenic
GGTTCCTTTGATTGGTTTAA+AGG 0.256130 4_4:+79199668 Msa0706230:CDS
TACTTGTGGGGCTGGGAATA+GGG 0.260252 4_4:+79199471 Msa0706230:CDS
TCTCCCCTTGTAGTTTCTTC+TGG 0.260472 4_4:-79196015 None:intergenic
ATGTAGCTGAGGAGGATAGA+AGG 0.282067 4_4:+79199702 Msa0706230:CDS
AAGTCTCTCCAATGCATAAA+TGG 0.282846 4_4:-79197086 None:intergenic
TCTCTACACCACCTCTTAAT+AGG 0.283524 4_4:-79196096 None:intergenic
CTTAACTTTGTGCTGTTCTC+AGG 0.284518 4_4:-79194601 None:intergenic
CTGACCAAAGCTTTGATACT+AGG 0.290247 4_4:+79195420 Msa0706230:CDS
GGGGCAGAAGTTATGGAAAA+TGG 0.292500 4_4:-79197558 None:intergenic
GGACCATCGATCAAAACTTT+AGG 0.293437 4_4:-79199404 None:intergenic
AGATCCAGTTTAGGGAGTTC+TGG 0.296332 4_4:+79195387 Msa0706230:CDS
CAAATGTAGGCCTAAGCTTT+TGG 0.296685 4_4:-79196065 None:intergenic
GCACAAATTTAAAGGCAAAT+AGG 0.296907 4_4:-79196191 None:intergenic
CCTTTAAATTTGTGCAATAT+AGG 0.299547 4_4:+79196199 Msa0706230:CDS
GTTGAAGGGTTTAGGTAGTT+TGG 0.307613 4_4:-79196824 None:intergenic
TAAGGTAAACGTGGGGTAAA+TGG 0.315225 4_4:+79200456 Msa0706230:three_prime_UTR
CTGTGGATTGGTGCCATGTT+AGG 0.320631 4_4:+79196168 Msa0706230:CDS
CCAGGAGGGCATACTTCTAT+TGG 0.329337 4_4:+79199630 Msa0706230:CDS
CACTAAGGTAATCATCATTA+GGG 0.333409 4_4:-79197578 None:intergenic
ACACTAAGGTAATCATCATT+AGG 0.335474 4_4:-79197579 None:intergenic
CGATCAACAAGATCCAGTTT+AGG 0.338665 4_4:+79195378 Msa0706230:CDS
TTCCTTAGTCAAGTAAAGTT+TGG 0.338913 4_4:-79196926 None:intergenic
GTTCCTTTGATTGGTTTAAA+GGG 0.340740 4_4:+79199669 Msa0706230:CDS
ATATTAAAATACTTGGTGAT+TGG 0.341745 4_4:+79197604 Msa0706230:CDS
CCTTTAGTATACTTATCATT+GGG 0.342963 4_4:-79199499 None:intergenic
GCTGACGAAGCTCGTGGGTC+AGG 0.343775 4_4:-79200213 None:intergenic
TCCTTTAGTATACTTATCAT+TGG 0.345791 4_4:-79199500 None:intergenic
TCACAGGTTTCAATGCCTTT+TGG 0.346810 4_4:+79196851 Msa0706230:CDS
ACAAAATGCCAGTAGTTTGA+TGG 0.346950 4_4:-79196709 None:intergenic
CACTGTGTGTGCATGGCAAA+AGG 0.347146 4_4:+79196249 Msa0706230:CDS
TTAATTGCCAACACATTTCC+AGG 0.347300 4_4:-79197305 None:intergenic
AATTCTAATGGTTGTGCTAA+TGG 0.351045 4_4:+79196756 Msa0706230:CDS
ATTATTAATTGTACTGCATC+TGG 0.352180 4_4:-79200693 None:intergenic
GAGAGCAGGGTTCCTTTGAT+TGG 0.360308 4_4:+79199660 Msa0706230:CDS
GTGAGTTTGTTGAAGGGTTT+AGG 0.363562 4_4:-79196832 None:intergenic
TCTTGTGCTGGCGCTCCATA+TGG 0.364390 4_4:-79199425 None:intergenic
TGGTTCCATGGATAATCAAC+AGG 0.364932 4_4:-79196906 None:intergenic
GATCAACAAGATCCAGTTTA+GGG 0.365700 4_4:+79195379 Msa0706230:CDS
CCATCACTTGGCTCAGGAAT+AGG 0.375371 4_4:+79196331 Msa0706230:CDS
CCTTTACACTGGCCAATACT+AGG 0.375742 4_4:+79196785 Msa0706230:CDS
TTAAAGGTGGCTGTTTATCC+TGG 0.378237 4_4:+79197287 Msa0706230:intron
AAATCATGGGAAGGGGTAAC+AGG 0.380435 4_4:+79196733 Msa0706230:CDS
TCTTTCTGGTTGGTTGTCAT+TGG 0.382375 4_4:-79199584 None:intergenic
AAATTTAATTAATTATTAAA+GGG 0.383504 4_4:+79200558 Msa0706230:three_prime_UTR
AGGATAACTGGCGAAGATCC+TGG 0.387720 4_4:+79196136 Msa0706230:CDS
GACCATCGATCAAAACTTTA+GGG 0.388643 4_4:-79199403 None:intergenic
ATCATTAGGGGCAGAAGTTA+TGG 0.391564 4_4:-79197565 None:intergenic
TGAGCCAAGTGATGGTGTTT+CGG 0.392615 4_4:-79196323 None:intergenic
AAGATATATCCTGTGTCATC+CGG 0.395834 4_4:-79195859 None:intergenic
CTGGATGTTTGACAGTTTGT+TGG 0.396246 4_4:-79195791 None:intergenic
TGAGCCTAGTATCAAAGCTT+TGG 0.398240 4_4:-79195424 None:intergenic
AGTCCCAGAACTCCCTAAAC+TGG 0.398261 4_4:-79195391 None:intergenic
CTGCACCAGCGTTTACGAAC+AGG 0.400456 4_4:+79199748 Msa0706230:CDS
TTGGAGAAGAAGAAATCATT+TGG 0.402319 4_4:+79194802 Msa0706230:CDS
AAGTCCACTCTGTCCATTGA+TGG 0.403456 4_4:-79197834 None:intergenic
TTTGTAGACTTGGATGTATC+TGG 0.404431 4_4:+79197051 Msa0706230:intron
AGTACTTCTTCCAGGATAAC+TGG 0.406685 4_4:+79196124 Msa0706230:CDS
AACTCACCAACTTGTGCTTC+CGG 0.408559 4_4:-79199917 None:intergenic
TTTGTAGACAGTTCGCCAAT+TGG 0.411473 4_4:-79199876 None:intergenic
GCAAACAGGCAATAAGATAA+TGG 0.412713 4_4:-79196301 None:intergenic
TCCCATCACCATTTATGCAT+TGG 0.416748 4_4:+79197078 Msa0706230:CDS
CTGCTGTTTCTCCACTTGAA+TGG 0.420177 4_4:+79197387 Msa0706230:CDS
AGGATCTTCGCCAGTTATCC+TGG 0.422128 4_4:-79196134 None:intergenic
AACCAAACTTTACTTGACTA+AGG 0.422801 4_4:+79196924 Msa0706230:CDS
TGGGTATTTGCTCTGTGGAT+TGG 0.423588 4_4:+79196156 Msa0706230:CDS
GATCCAGTTTAGGGAGTTCT+GGG 0.425992 4_4:+79195388 Msa0706230:CDS
GACCTGGAAGGAAGTAAATC+AGG 0.427229 4_4:+79200655 Msa0706230:three_prime_UTR
ATAGCTTTGTAAAAGGACTA+AGG 0.428808 4_4:+79200438 Msa0706230:three_prime_UTR
TCAAGTAAAGTTTGGTTCCA+TGG 0.429335 4_4:-79196918 None:intergenic
TATAAAGCAGCTGAAGCGTT+TGG 0.432224 4_4:+79194855 Msa0706230:CDS
GTCAACATCTGTGACAGCTT+TGG 0.433709 4_4:-79194635 None:intergenic
TCTGTCCATTGATGGCTGGC+TGG 0.436385 4_4:-79197826 None:intergenic
AGTGTTCATATTAAAATACT+TGG 0.436750 4_4:+79197597 Msa0706230:CDS
GTGATGGTGTTTCGGCAAAC+AGG 0.438335 4_4:-79196315 None:intergenic
CTCGAGACTCTCTTATTACA+TGG 0.440397 4_4:+79195991 Msa0706230:CDS
AAGCTTAGGCCTACATTTGA+GGG 0.442339 4_4:+79196069 Msa0706230:CDS
CGATTATAGCTGAGTCATCT+TGG 0.450820 4_4:-79200354 None:intergenic
AAAGCTTAGGCCTACATTTG+AGG 0.451241 4_4:+79196068 Msa0706230:CDS
CAAGTCTGTGCGAATATTGA+AGG 0.452077 4_4:+79197132 Msa0706230:CDS
AGATACCAAGTACTTCTTCC+AGG 0.454959 4_4:+79196116 Msa0706230:CDS
CCTTCCAGGTCCCTTCTCCT+GGG 0.456314 4_4:-79200643 None:intergenic
TGTAGCTGAGGAGGATAGAA+GGG 0.458120 4_4:+79199703 Msa0706230:CDS
TTGAGGGAAATCCTATTAAG+AGG 0.459148 4_4:+79196085 Msa0706230:CDS
CATGAGAAACAGTCTTTGAC+TGG 0.459698 4_4:+79194772 Msa0706230:CDS
CAGGAGGGCATACTTCTATT+GGG 0.460300 4_4:+79199631 Msa0706230:CDS
GTTTGACAGTTTGTTGGCAG+TGG 0.460518 4_4:-79195785 None:intergenic
AGCTCGTGGGTCAGGGTGGA+TGG 0.460543 4_4:-79200205 None:intergenic
AGCATGAGCCACTGCAGACT+TGG 0.460746 4_4:-79194920 None:intergenic
GCAGTGGCTCATGCTCTCAC+TGG 0.463259 4_4:+79194928 Msa0706230:CDS
TTGTAGACAGTTCGCCAATT+GGG 0.465108 4_4:-79199875 None:intergenic
TACTCCCTGTAGTCTTGTGC+TGG 0.466522 4_4:-79199437 None:intergenic
ACTGTGTGTGCATGGCAAAA+GGG 0.469519 4_4:+79196250 Msa0706230:CDS
TCATCCCAGGAGAAGGGACC+TGG 0.471554 4_4:+79200639 Msa0706230:three_prime_UTR
CTATTGGGTGACAAGAGAGC+AGG 0.473115 4_4:+79199646 Msa0706230:CDS
GAGTCATCTTGGTGGAGGAC+TGG 0.473363 4_4:-79200343 None:intergenic
AAGGCCATGGAAAAGGAAGA+TGG 0.473474 4_4:+79199539 Msa0706230:CDS
TTTGGCTTAGCATTTGGCTC+AGG 0.474206 4_4:-79196047 None:intergenic
TTAACTTTGTGCTGTTCTCA+GGG 0.474665 4_4:-79194600 None:intergenic
TGAGGATAACAGTGGAAGGT+GGG 0.475088 4_4:+79200313 Msa0706230:three_prime_UTR
ATAGCTCTGGCAATATCAAT+TGG 0.479283 4_4:+79196583 Msa0706230:CDS
GGTCAATAATTTCAAGGCCA+TGG 0.482542 4_4:+79199526 Msa0706230:CDS
GAGCGCCAGCACAAGACTAC+AGG 0.484229 4_4:+79199432 Msa0706230:CDS
GTTTGTTGGCAGTGGCGCTC+AGG 0.484580 4_4:-79195777 None:intergenic
GGAATATGCGGCTTTGATCA+TGG 0.484801 4_4:+79195825 Msa0706230:CDS
ATAGGATTTCCCTCAAATGT+AGG 0.484879 4_4:-79196078 None:intergenic
CCTAGTATTGGCCAGTGTAA+AGG 0.486019 4_4:-79196785 None:intergenic
GCTCGGCAGAGAGGGATTCA+AGG 0.486020 4_4:+79195350 Msa0706230:CDS
ACTTGTGGGGCTGGGAATAG+GGG 0.489561 4_4:+79199472 Msa0706230:CDS
TGATAAGATGAAAATAATTG+AGG 0.490052 4_4:+79200295 Msa0706230:exon
CCAATAGAAGTATGCCCTCC+TGG 0.490343 4_4:-79199630 None:intergenic
GGACATGGTCAATAATTTCA+AGG 0.490880 4_4:+79199520 Msa0706230:CDS
GATGGGTTTGCAATGGAAGA+AGG 0.492450 4_4:+79199557 Msa0706230:CDS
CTAAGAGCTGAATGCTTGAA+AGG 0.492708 4_4:+79197857 Msa0706230:CDS
CCACTCTGTCCATTGATGGC+TGG 0.495302 4_4:-79197830 None:intergenic
CACTGGCCAATACTAGGTTC+AGG 0.496070 4_4:+79196791 Msa0706230:CDS
TAATTTCAAGGCCATGGAAA+AGG 0.498073 4_4:+79199532 Msa0706230:CDS
CAAAGCTATAAAACAACCAT+TGG 0.500808 4_4:-79200424 None:intergenic
CATCCACACCGTGCTTTGCA+TGG 0.501999 4_4:-79199814 None:intergenic
AAATGCTAAGCCAAAAGCTT+AGG 0.502589 4_4:+79196055 Msa0706230:CDS
AAATTACCTTGTGAAAATTG+AGG 0.503975 4_4:-79196389 None:intergenic
TCGCTCTGCTCTTATCGCTA+TGG 0.505630 4_4:+79199778 Msa0706230:CDS
CTCCAATGCATAAATGGTGA+TGG 0.507413 4_4:-79197080 None:intergenic
GCTTGCCAGCCAGCCATCAA+TGG 0.508521 4_4:+79197821 Msa0706230:CDS
TTGAGGATAACAGTGGAAGG+TGG 0.508853 4_4:+79200312 Msa0706230:three_prime_UTR
ACAAGACTACAGGGAGTATG+AGG 0.514565 4_4:+79199442 Msa0706230:CDS
CCCAATGATAAGTATACTAA+AGG 0.515270 4_4:+79199499 Msa0706230:CDS
CACGGTGTGGATGTTGTGTC+CGG 0.523933 4_4:+79199824 Msa0706230:CDS
TTTATCAGCAAGACTGATGT+TGG 0.524031 4_4:+79194958 Msa0706230:CDS
AGGAACAAAAGCACCTAGCT+TGG 0.524887 4_4:-79196355 None:intergenic
ATTATAGTCATCCCAGGAGA+AGG 0.525896 4_4:+79200632 Msa0706230:three_prime_UTR
TTGGTATATAAGCACACTAT+AGG 0.529181 4_4:-79200405 None:intergenic
ACAGAAAGTGACATGGGAGA+AGG 0.529447 4_4:+79194745 Msa0706230:CDS
ACGCATTGCACTTAATCATC+CGG 0.530819 4_4:+79199898 Msa0706230:CDS
GAACCTAGAGTCTTTCTGGT+TGG 0.531369 4_4:-79199594 None:intergenic
AAGATCTGCATATGAAGTGA+TGG 0.532003 4_4:+79196224 Msa0706230:CDS
GGATGACACAGGATATATCT+TGG 0.533783 4_4:+79195861 Msa0706230:CDS
ATACTAAAGGTGAGGTAGGA+TGG 0.535314 4_4:+79200502 Msa0706230:three_prime_UTR
GAAACCTGTGAGTTTGTTGA+AGG 0.536478 4_4:-79196839 None:intergenic
GGATAACTGGCGAAGATCCT+GGG 0.536870 4_4:+79196137 Msa0706230:CDS
TAAACGTGGGGTAAATGGTT+AGG 0.537273 4_4:+79200461 Msa0706230:three_prime_UTR
ATACTCTTGCTCGGCAGAGA+GGG 0.537758 4_4:+79195342 Msa0706230:CDS
AACTTTACTTGACTAAGGAA+TGG 0.538178 4_4:+79196929 Msa0706230:CDS
ATTCCTCCTGAACCTAGTAT+TGG 0.538799 4_4:-79196797 None:intergenic
TCATTCATTATAGTCATCCC+AGG 0.538987 4_4:+79200626 Msa0706230:three_prime_UTR
CTCAGGAATAGGACCAAGCT+AGG 0.539998 4_4:+79196342 Msa0706230:CDS
CAGAAAGTGACATGGGAGAA+GGG 0.540117 4_4:+79194746 Msa0706230:CDS
ACCAGAACCAGCAAAACGAT+TGG 0.540196 4_4:+79194891 Msa0706230:CDS
GAAATCATTTGGTGCTTCAG+TGG 0.540248 4_4:+79194813 Msa0706230:CDS
CGAGCTTCGTCAGCTATCGT+TGG 0.542059 4_4:+79200222 Msa0706230:CDS
GTCTTTGACTGGGAACAAGT+TGG 0.542503 4_4:+79194783 Msa0706230:CDS
CACTATAGGTTATCAACGAA+AGG 0.542750 4_4:-79200391 None:intergenic
TAAATGGTTAGGTGGTGAGT+TGG 0.543275 4_4:+79200472 Msa0706230:three_prime_UTR
AGATATATCCTGTGTCATCC+GGG 0.543354 4_4:-79195858 None:intergenic
GAGAGAAACCATCAAACTAC+TGG 0.544014 4_4:+79196701 Msa0706230:CDS
CTGTGTGTGCATGGCAAAAG+GGG 0.545633 4_4:+79196251 Msa0706230:CDS
AGATCTGCATATGAAGTGAT+GGG 0.547819 4_4:+79196225 Msa0706230:CDS
CCAAATACTAAAGGTGAGGT+AGG 0.549175 4_4:+79200498 Msa0706230:three_prime_UTR
TCCAATGCATAAATGGTGAT+GGG 0.555776 4_4:-79197079 None:intergenic
AAATTGAGGCCATCATCAAA+AGG 0.555793 4_4:-79196375 None:intergenic
CTGACGAAGCTCGTGGGTCA+GGG 0.559327 4_4:-79200212 None:intergenic
GACAATCAAAACAGCAACAT+GGG 0.561675 4_4:+79194526 Msa0706230:exon
ACTCTCTTTGCTAAATGCAT+AGG 0.564240 4_4:+79195051 Msa0706230:CDS
GTTATCCTGGAAGAAGTACT+TGG 0.567722 4_4:-79196121 None:intergenic
ATTAATATGTCAAAGCCTCA+AGG 0.569847 4_4:+79197323 Msa0706230:CDS
AGTAAGTAACTACTACAGAA+AGG 0.570738 4_4:+79194453 Msa0706230:five_prime_UTR
ACAAATCCATACCATTCAAG+TGG 0.571736 4_4:-79197398 None:intergenic
AGGCCATGGAAAAGGAAGAT+GGG 0.572461 4_4:+79199540 Msa0706230:CDS
GAAACACCATCACTTGGCTC+AGG 0.576141 4_4:+79196325 Msa0706230:CDS
AGGATTGAATGAAGAGTCAA+AGG 0.577878 4_4:+79195298 Msa0706230:intron
TAGCTGAGTCATCTTGGTGG+AGG 0.578013 4_4:-79200348 None:intergenic
AGAGTCACCTTGAATGTCCA+TGG 0.578442 4_4:-79194695 None:intergenic
AGGGGTAACAGGAATTCTAA+TGG 0.579371 4_4:+79196744 Msa0706230:CDS
AGCAAGACTGATGTTGGTGC+AGG 0.579885 4_4:+79194964 Msa0706230:CDS
TTCCTTTGATTGGTTTAAAG+GGG 0.580836 4_4:+79199670 Msa0706230:CDS
CACCCCTTTAAACCAATCAA+AGG 0.583264 4_4:-79199672 None:intergenic
TGTTTATCCTGGAAATGTGT+TGG 0.584274 4_4:+79197298 Msa0706230:CDS
AAACCCTTCAACAAACTCAC+AGG 0.585965 4_4:+79196835 Msa0706230:CDS
GGAAATAGATAACCATGAGA+AGG 0.587784 4_4:+79200579 Msa0706230:three_prime_UTR
ATGGGTTTGCAATGGAAGAA+GGG 0.587848 4_4:+79199558 Msa0706230:CDS
TTATAGCTGAGTCATCTTGG+TGG 0.588058 4_4:-79200351 None:intergenic
TTTGCCGAAACACCATCACT+TGG 0.589013 4_4:+79196319 Msa0706230:CDS
TGCACCAGCGTTTACGAACA+GGG 0.589244 4_4:+79199749 Msa0706230:CDS
AGTTGGCTACCAAATACTAA+AGG 0.590303 4_4:+79200489 Msa0706230:three_prime_UTR
TCTGAAAACCAAATTCTCAC+AGG 0.591788 4_4:+79197635 Msa0706230:CDS
AAGATAACCGTCAGTTGTCA+CGG 0.592953 4_4:-79195022 None:intergenic
AAAGGAAGATGGGTTTGCAA+TGG 0.593225 4_4:+79199550 Msa0706230:CDS
CTGGCAATATCAATTGGTGT+TGG 0.593359 4_4:+79196589 Msa0706230:CDS
ACTATAGGTTATCAACGAAA+GGG 0.593711 4_4:-79200390 None:intergenic
ATAGTGTGCTTATATACCAA+TGG 0.594270 4_4:+79200408 Msa0706230:three_prime_UTR
CCTATTCCTGAGCCAAGTGA+TGG 0.595115 4_4:-79196331 None:intergenic
AAAATAATTGAGGATAACAG+TGG 0.596889 4_4:+79200305 Msa0706230:three_prime_UTR
CAACCAACCAGAAAGACTCT+AGG 0.598818 4_4:+79199591 Msa0706230:CDS
TATGCCCTGTTGATTATCCA+TGG 0.599483 4_4:+79196901 Msa0706230:CDS
AATCATCCGGAAGCACAAGT+TGG 0.599828 4_4:+79199911 Msa0706230:CDS
ATGAGACATGACACGAGTGC+CGG 0.599911 4_4:-79199843 None:intergenic
ATGACGACACACTTATGCAA+GGG 0.601258 4_4:-79200527 None:intergenic
GAGGTGATGAGAATACCAAA+AGG 0.602190 4_4:-79196866 None:intergenic
AGAAAGTGACATGGGAGAAG+GGG 0.602662 4_4:+79194747 Msa0706230:CDS
TAACTTTGTGCTGTTCTCAG+GGG 0.604777 4_4:-79194599 None:intergenic
CAAGGATTTAGCTATAAGAG+TGG 0.606086 4_4:+79197341 Msa0706230:CDS
GTAGCTGAGGAGGATAGAAG+GGG 0.606303 4_4:+79199704 Msa0706230:CDS
GGGCATACACAATGATGAAG+AGG 0.609765 4_4:-79196885 None:intergenic
TTATAGTCATCCCAGGAGAA+GGG 0.609894 4_4:+79200633 Msa0706230:three_prime_UTR
AAGCTTACCGTGACAACTGA+CGG 0.610596 4_4:+79195015 Msa0706230:CDS
TCTATAAACCATGCAAAGCA+CGG 0.611338 4_4:+79199806 Msa0706230:CDS
GAACTAGACCCGGATGACAC+AGG 0.611910 4_4:+79195850 Msa0706230:CDS
CTTTAGTATACTTATCATTG+GGG 0.612008 4_4:-79199498 None:intergenic
ATCACCCTGTTCGTAAACGC+TGG 0.614534 4_4:-79199753 None:intergenic
ACGATAGCTGACGAAGCTCG+TGG 0.614905 4_4:-79200219 None:intergenic
AAAGGCAAATAGGCCTAACA+TGG 0.615986 4_4:-79196181 None:intergenic
TGACAATCAAAACAGCAACA+TGG 0.616414 4_4:+79194525 Msa0706230:exon
AGAAGATGCAGACTATGTTG+AGG 0.617846 4_4:+79194669 Msa0706230:CDS
CATTTAGCAAAGAGAGTGCG+AGG 0.617870 4_4:-79195045 None:intergenic
TAATTGAGGATAACAGTGGA+AGG 0.620492 4_4:+79200309 Msa0706230:three_prime_UTR
GATGGGGCACTGTGTGTGCA+TGG 0.620735 4_4:+79196242 Msa0706230:CDS
AAAAGGACTAAGGTAAACGT+GGG 0.625790 4_4:+79200448 Msa0706230:three_prime_UTR
TATTGGGTGACAAGAGAGCA+GGG 0.629336 4_4:+79199647 Msa0706230:CDS
AACTGTAACAGAAAGTGACA+TGG 0.630724 4_4:+79194738 Msa0706230:CDS
ACGTGGGGTAAATGGTTAGG+TGG 0.631214 4_4:+79200464 Msa0706230:three_prime_UTR
TAAAAGGACTAAGGTAAACG+TGG 0.631345 4_4:+79200447 Msa0706230:three_prime_UTR
GAGGTGACCATGGACATTCA+AGG 0.631878 4_4:+79194688 Msa0706230:CDS
GATCCTGGGTATTTGCTCTG+TGG 0.632359 4_4:+79196151 Msa0706230:CDS
AGGGAAATCCTATTAAGAGG+TGG 0.632392 4_4:+79196088 Msa0706230:CDS
CTCTTATAGCTAAATCCTTG+AGG 0.633436 4_4:-79197338 None:intergenic
AGATGCAGATGGAAGAATCA+CGG 0.635081 4_4:+79195557 Msa0706230:CDS
CATGACGACACACTTATGCA+AGG 0.635369 4_4:-79200528 None:intergenic
AGCGCCAGCACAAGACTACA+GGG 0.635514 4_4:+79199433 Msa0706230:CDS
ACGAAGCTCGTGGGTCAGGG+TGG 0.637836 4_4:-79200209 None:intergenic
TTGCTTGCATGAAGAATGCG+AGG 0.639037 4_4:-79196646 None:intergenic
TGACGACACACTTATGCAAG+GGG 0.641142 4_4:-79200526 None:intergenic
ATGGACCAGAAGAAACTACA+AGG 0.641148 4_4:+79196010 Msa0706230:CDS
AAACCTGTGAGTTTGTTGAA+GGG 0.643367 4_4:-79196838 None:intergenic
CCCAGGAGAAGGGACCTGGA+AGG 0.645269 4_4:+79200643 Msa0706230:three_prime_UTR
GATGAATGATGTAGCTGAGG+AGG 0.645963 4_4:+79199694 Msa0706230:CDS
GAGGATAACAGTGGAAGGTG+GGG 0.646573 4_4:+79200314 Msa0706230:three_prime_UTR
TGAAAGGAGATAACAGCCCA+AGG 0.651260 4_4:+79197873 Msa0706230:CDS
ATAGGTTATCAACGAAAGGG+TGG 0.651538 4_4:-79200387 None:intergenic
CGATAGCTGACGAAGCTCGT+GGG 0.651822 4_4:-79200218 None:intergenic
GATCATGGAAGAACTAGACC+CGG 0.653019 4_4:+79195840 Msa0706230:CDS
ACTGTAACAGAAAGTGACAT+GGG 0.653158 4_4:+79194739 Msa0706230:CDS
GGAGAGGACCAAGTCTGCAG+TGG 0.653264 4_4:+79194912 Msa0706230:CDS
AGGGTTGACAAAGATGCAGA+TGG 0.653404 4_4:+79195546 Msa0706230:intron
CCAGCCATCAATGGACAGAG+TGG 0.654950 4_4:+79197830 Msa0706230:CDS
ATGAGAAACAGTCTTTGACT+GGG 0.655734 4_4:+79194773 Msa0706230:CDS
AAACCATGCAAAGCACGGTG+TGG 0.657785 4_4:+79199811 Msa0706230:CDS
GCTACCAAATACTAAAGGTG+AGG 0.659426 4_4:+79200494 Msa0706230:three_prime_UTR
TGAAACACTTAAATTGAACA+TGG 0.659896 4_4:+79196278 Msa0706230:CDS
GATACTCTTGCTCGGCAGAG+AGG 0.662539 4_4:+79195341 Msa0706230:CDS
GATAAGTATACTAAAGGACA+TGG 0.662957 4_4:+79199505 Msa0706230:CDS
GGTTCAGTGACTTCAAGACC+AGG 0.664037 4_4:+79199612 Msa0706230:CDS
CTGGAAGGAAGTAAATCAGG+AGG 0.664305 4_4:+79200658 Msa0706230:three_prime_UTR
TGGACCAGAAGAAACTACAA+GGG 0.669280 4_4:+79196011 Msa0706230:CDS
AGACTGATGTTGGTGCAGGA+TGG 0.677140 4_4:+79194968 Msa0706230:CDS
TGGCCAATACTAGGTTCAGG+AGG 0.678224 4_4:+79196794 Msa0706230:CDS
AATGGCAATAGCCTTTACAC+TGG 0.678535 4_4:+79196774 Msa0706230:CDS
AACCAGCAAAACGATTGGAG+AGG 0.682714 4_4:+79194896 Msa0706230:CDS
AATCAAAACAGCAACATGGG+AGG 0.683736 4_4:+79194529 Msa0706230:exon
GAAACAAGCAGAGGAATATG+CGG 0.686297 4_4:+79195813 Msa0706230:CDS
GATCTGCATATGAAGTGATG+GGG 0.689301 4_4:+79196226 Msa0706230:CDS
GGTGATGAATGATGTAGCTG+AGG 0.689759 4_4:+79199691 Msa0706230:CDS
AGACTACAGGGAGTATGAGG+TGG 0.691268 4_4:+79199445 Msa0706230:CDS
TCAGTGACTTCAAGACCAGG+AGG 0.699104 4_4:+79199615 Msa0706230:CDS
AAACATCCAGAAACAAGCAG+AGG 0.703458 4_4:+79195804 Msa0706230:CDS
CAGTGACTTCAAGACCAGGA+GGG 0.708547 4_4:+79199616 Msa0706230:CDS
TGGAAGGAAGTAAATCAGGA+GGG 0.710428 4_4:+79200659 Msa0706230:three_prime_UTR
CGGCAGAGAGGGATTCAAGG+AGG 0.710701 4_4:+79195353 Msa0706230:CDS
ACTAAGGTAATCATCATTAG+GGG 0.710937 4_4:-79197577 None:intergenic
GGACCAGAAGAAACTACAAG+GGG 0.713114 4_4:+79196012 Msa0706230:CDS
AGACTATGTTGAGGTGACCA+TGG 0.715108 4_4:+79194678 Msa0706230:CDS
GGTTCCATGGATAATCAACA+GGG 0.719137 4_4:-79196905 None:intergenic
AATCCACAGAGCAAATACCC+AGG 0.727261 4_4:-79196154 None:intergenic
AAAGGACTAAGGTAAACGTG+GGG 0.736332 4_4:+79200449 Msa0706230:three_prime_UTR
TGCAGATGGAAGAATCACGG+AGG 0.763636 4_4:+79195560 Msa0706230:CDS
GACGACACACTTATGCAAGG+GGG 0.786638 4_4:-79200525 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATTTAATTAATTATTAA+AGG + chr4_4:79200557-79200576 Msa0706230:three_prime_UTR 0.0%
!! AAATTTAATTAATTATTAAA+GGG + chr4_4:79200558-79200577 Msa0706230:three_prime_UTR 0.0%
!! ATTTATCATTTAAAAAAAGT+TGG - chr4_4:79198996-79199015 None:intergenic 10.0%
!!! ATTTATCATTTGAAACAATA+TGG - chr4_4:79195090-79195109 None:intergenic 15.0%
!!! TTGAAATAGTTATTTTAATC+TGG - chr4_4:79195918-79195937 None:intergenic 15.0%
!! TTTGAGTGAAAAAAAAAATT+AGG + chr4_4:79198480-79198499 Msa0706230:intron 15.0%
!! TTGAGTGAAAAAAAAAATTA+GGG + chr4_4:79198481-79198500 Msa0706230:intron 15.0%
!!! TTGAATACATATATTTTCAA+AGG - chr4_4:79198712-79198731 None:intergenic 15.0%
!! ATAAAAAAATTAATATTGGC+TGG - chr4_4:79198884-79198903 None:intergenic 15.0%
!!! TTTTTTATGAATGAGTATTT+AGG + chr4_4:79198896-79198915 Msa0706230:intron 15.0%
!!! CTTTTTATCTCTTTTTTTTT+GGG - chr4_4:79199208-79199227 None:intergenic 15.0%
!!! TCTTTTTATCTCTTTTTTTT+TGG - chr4_4:79199209-79199228 None:intergenic 15.0%
!! ATTTCAACATAAAAAGAAAA+TGG + chr4_4:79200043-79200062 Msa0706230:intron 15.0%
!! TAAATGATAAGTTAAGAACT+TGG + chr4_4:79195105-79195124 Msa0706230:intron 20.0%
!!! ATAAAAGTATTCCAAAGTAA+GGG - chr4_4:79196985-79197004 None:intergenic 20.0%
!!! TATAAAAGTATTCCAAAGTA+AGG - chr4_4:79196986-79197005 None:intergenic 20.0%
!! CATTTCATTGTCAAATTTAA+AGG + chr4_4:79197271-79197290 Msa0706230:intron 20.0%
!! GAAACATTCTATATTAAATG+TGG + chr4_4:79197428-79197447 Msa0706230:intron 20.0%
!! GGGAAATAAAAATAGAAAAA+CGG - chr4_4:79197488-79197507 None:intergenic 20.0%
!! AATGCATAAACAATGAATTA+AGG - chr4_4:79197529-79197548 None:intergenic 20.0%
!!! GTATTTTAATATGAACACTA+AGG - chr4_4:79197596-79197615 None:intergenic 20.0%
!! AGTGTTCATATTAAAATACT+TGG + chr4_4:79197597-79197616 Msa0706230:CDS 20.0%
!!! ATATTAAAATACTTGGTGAT+TGG + chr4_4:79197604-79197623 Msa0706230:CDS 20.0%
!! AGAAAACACATAATAAATTC+AGG - chr4_4:79197765-79197784 None:intergenic 20.0%
!! TATTTAAATCCTTATCTTAC+AGG - chr4_4:79198074-79198093 None:intergenic 20.0%
!! AAGATAAGGATTTAAATATC+AGG + chr4_4:79198076-79198095 Msa0706230:intron 20.0%
!! TAATCATTTGATTATAAGCA+GGG - chr4_4:79198397-79198416 None:intergenic 20.0%
!! ATAATCATTTGATTATAAGC+AGG - chr4_4:79198398-79198417 None:intergenic 20.0%
!! AATCAAATGATTATGTTAAG+CGG + chr4_4:79198404-79198423 Msa0706230:intron 20.0%
!! AAAAAAAAATTAGGGTGATA+AGG + chr4_4:79198489-79198508 Msa0706230:intron 20.0%
!! TTGTTAATTACAAATATGCA+TGG - chr4_4:79199311-79199330 None:intergenic 20.0%
!!! TCATAACATACAATCATTTT+CGG - chr4_4:79199361-79199380 None:intergenic 20.0%
!! ACTTAATCATATCATCATAT+TGG + chr4_4:79200132-79200151 Msa0706230:intron 20.0%
!!! ATCATTTTTTTTTGTAATGC+AGG + chr4_4:79200166-79200185 Msa0706230:intron 20.0%
!!! TCATTTTTTTTTGTAATGCA+GGG + chr4_4:79200167-79200186 Msa0706230:intron 20.0%
!! TGATAAGATGAAAATAATTG+AGG + chr4_4:79200295-79200314 Msa0706230:exon 20.0%
!!! TTGTTTTATAGCTTTGTAAA+AGG + chr4_4:79200431-79200450 Msa0706230:three_prime_UTR 20.0%
! TTGAAACAATATGGTAAAAC+AGG - chr4_4:79195081-79195100 None:intergenic 25.0%
! GTAATTTCTAAGTGTTTCTT+TGG + chr4_4:79195265-79195284 Msa0706230:intron 25.0%
!!! TGACATGTAATTCTTTGTTT+TGG + chr4_4:79195457-79195476 Msa0706230:intron 25.0%
!!! CAAAATAAATGTTGGTGATA+TGG - chr4_4:79195521-79195540 None:intergenic 25.0%
!!! CAACATTTATTTTGATTGCA+GGG + chr4_4:79195527-79195546 Msa0706230:intron 25.0%
! AAAATATGGTCAAATGAGTA+AGG - chr4_4:79195957-79195976 None:intergenic 25.0%
!!! TTGACCATATTTTAACAGAT+AGG + chr4_4:79195964-79195983 Msa0706230:intron 25.0%
! ATTGCCTATCTGTTAAAATA+TGG - chr4_4:79195971-79195990 None:intergenic 25.0%
! CCTATATTGCACAAATTTAA+AGG - chr4_4:79196202-79196221 None:intergenic 25.0%
! CCTTTAAATTTGTGCAATAT+AGG + chr4_4:79196199-79196218 Msa0706230:CDS 25.0%
! TGAAACACTTAAATTGAACA+TGG + chr4_4:79196278-79196297 Msa0706230:CDS 25.0%
! AAATTACCTTGTGAAAATTG+AGG - chr4_4:79196392-79196411 None:intergenic 25.0%
! ATATGATATGAAAACACACA+TGG + chr4_4:79197189-79197208 Msa0706230:intron 25.0%
! TATCGAAATTACTTCTGTTA+TGG + chr4_4:79197215-79197234 Msa0706230:intron 25.0%
! TTCATTGTCAAATTTAAAGG+TGG + chr4_4:79197274-79197293 Msa0706230:intron 25.0%
! GGTATAGAAATCAGATAAAT+GGG - chr4_4:79197508-79197527 None:intergenic 25.0%
! AGGTATAGAAATCAGATAAA+TGG - chr4_4:79197509-79197528 None:intergenic 25.0%
!!! TTATTGCTTTTGTTTCTATC+AGG + chr4_4:79197799-79197818 Msa0706230:intron 25.0%
! TTCTACAAATATCTGATAGT+AGG + chr4_4:79197941-79197960 Msa0706230:intron 25.0%
! TACGTATAACTTCTATTGTA+AGG - chr4_4:79198186-79198205 None:intergenic 25.0%
!! ATAGAAGTTATACGTACTTT+TGG + chr4_4:79198190-79198209 Msa0706230:intron 25.0%
! TAAAGAACCAACTTAATTAC+TGG + chr4_4:79198256-79198275 Msa0706230:intron 25.0%
! ATGATATCCAGTAATTAAGT+TGG - chr4_4:79198266-79198285 None:intergenic 25.0%
! TAAACACGTTCTTCAATTAT+TGG - chr4_4:79198293-79198312 None:intergenic 25.0%
!!! GTTTTTTGTTTTGTCCAATT+TGG + chr4_4:79198330-79198349 Msa0706230:intron 25.0%
! ATCAAATGATTATGTTAAGC+GGG + chr4_4:79198405-79198424 Msa0706230:intron 25.0%
! GTTAAGAAATCAAATGTAGA+AGG - chr4_4:79198659-79198678 None:intergenic 25.0%
! GAGAAAACTGCATAAAATAT+TGG - chr4_4:79198767-79198786 None:intergenic 25.0%
! TATTAAATGTGTACCTTAGA+AGG + chr4_4:79198924-79198943 Msa0706230:intron 25.0%
! ATTAAATGTGTACCTTAGAA+GGG + chr4_4:79198925-79198944 Msa0706230:intron 25.0%
! AGAGATTTAAATGTAGTAGT+AGG - chr4_4:79199050-79199069 None:intergenic 25.0%
! CTTTAGTATACTTATCATTG+GGG - chr4_4:79199501-79199520 None:intergenic 25.0%
! CCTTTAGTATACTTATCATT+GGG - chr4_4:79199502-79199521 None:intergenic 25.0%
! TCCTTTAGTATACTTATCAT+TGG - chr4_4:79199503-79199522 None:intergenic 25.0%
! CAATGATCAATAATATGCTT+TGG + chr4_4:79200013-79200032 Msa0706230:intron 25.0%
!!! CATTTTTTTTTGTAATGCAG+GGG + chr4_4:79200168-79200187 Msa0706230:intron 25.0%
! TTCTTTATGAAAGTCGAATT+TGG - chr4_4:79200269-79200288 None:intergenic 25.0%
! AAAATAATTGAGGATAACAG+TGG + chr4_4:79200305-79200324 Msa0706230:three_prime_UTR 25.0%
! ATTATTAATTGTACTGCATC+TGG - chr4_4:79200696-79200715 None:intergenic 25.0%
AGTAAGTAACTACTACAGAA+AGG + chr4_4:79194453-79194472 Msa0706230:five_prime_UTR 30.0%
TTGGAGAAGAAGAAATCATT+TGG + chr4_4:79194802-79194821 Msa0706230:CDS 30.0%
GGTAGAGACATAAAAAACAT+TGG - chr4_4:79195140-79195159 None:intergenic 30.0%
TGCAACTTTAATAGTTGTGA+TGG - chr4_4:79195161-79195180 None:intergenic 30.0%
GTTTCTTTGGATTCAATTGT+AGG + chr4_4:79195278-79195297 Msa0706230:intron 30.0%
!! AAATGTTGGTGATATGGTTA+CGG - chr4_4:79195515-79195534 None:intergenic 30.0%
CCTGCAATCAAAATAAATGT+TGG - chr4_4:79195529-79195548 None:intergenic 30.0%
!!! CCAACATTTATTTTGATTGC+AGG + chr4_4:79195526-79195545 Msa0706230:intron 30.0%
ACAATCATTCAAGCAAAAGT+TGG - chr4_4:79195709-79195728 None:intergenic 30.0%
GCACAAATTTAAAGGCAAAT+AGG - chr4_4:79196194-79196213 None:intergenic 30.0%
! ATTTTGTCAAATCATGGGAA+GGG + chr4_4:79196725-79196744 Msa0706230:CDS 30.0%
AATTCTAATGGTTGTGCTAA+TGG + chr4_4:79196756-79196775 Msa0706230:CDS 30.0%
AACCAAACTTTACTTGACTA+AGG + chr4_4:79196924-79196943 Msa0706230:CDS 30.0%
TTCCTTAGTCAAGTAAAGTT+TGG - chr4_4:79196929-79196948 None:intergenic 30.0%
AACTTTACTTGACTAAGGAA+TGG + chr4_4:79196929-79196948 Msa0706230:CDS 30.0%
AATGGAACCATAAAACAGTT+AGG + chr4_4:79196947-79196966 Msa0706230:intron 30.0%
TATTATGTGCTTTGTAGACT+TGG + chr4_4:79197041-79197060 Msa0706230:intron 30.0%
ATTAATATGTCAAAGCCTCA+AGG + chr4_4:79197323-79197342 Msa0706230:CDS 30.0%
TTCATTGTTTATGCATTCAC+AGG + chr4_4:79197532-79197551 Msa0706230:intron 30.0%
ACTAAGGTAATCATCATTAG+GGG - chr4_4:79197580-79197599 None:intergenic 30.0%
CACTAAGGTAATCATCATTA+GGG - chr4_4:79197581-79197600 None:intergenic 30.0%
ACACTAAGGTAATCATCATT+AGG - chr4_4:79197582-79197601 None:intergenic 30.0%
AATATTCACCTGTGAGAATT+TGG - chr4_4:79197646-79197665 None:intergenic 30.0%
AAAACATTAAGGCATACCTT+GGG - chr4_4:79197892-79197911 None:intergenic 30.0%
AAAAACATTAAGGCATACCT+TGG - chr4_4:79197893-79197912 None:intergenic 30.0%
!! TGCCTTAATGTTTTTGCTTT+TGG + chr4_4:79197898-79197917 Msa0706230:intron 30.0%
TGCCAAAAGCAAAAACATTA+AGG - chr4_4:79197903-79197922 None:intergenic 30.0%
ACAAATATCTGATAGTAGGT+AGG + chr4_4:79197945-79197964 Msa0706230:intron 30.0%
TAACATGCAAAAACTGTAGT+TGG + chr4_4:79197968-79197987 Msa0706230:intron 30.0%
TTAACTTCACCTGTAAGATA+AGG + chr4_4:79198062-79198081 Msa0706230:intron 30.0%
AAAAGCCTATAACTAAGGTT+AGG + chr4_4:79198099-79198118 Msa0706230:intron 30.0%
!! TTGTTTTGTCCAATTTGGTT+TGG + chr4_4:79198335-79198354 Msa0706230:intron 30.0%
AATTGACATCCAAACCAAAT+TGG - chr4_4:79198347-79198366 None:intergenic 30.0%
GATGTCAATTTATATTCCCA+TGG + chr4_4:79198357-79198376 Msa0706230:intron 30.0%
TCAAATGATTATGTTAAGCG+GGG + chr4_4:79198406-79198425 Msa0706230:intron 30.0%
!! ATAAGGACGCTTTTTGAAAA+TGG + chr4_4:79198506-79198525 Msa0706230:intron 30.0%
!! TAAGGACGCTTTTTGAAAAT+GGG + chr4_4:79198507-79198526 Msa0706230:intron 30.0%
ACAAGTTAAGGAGCTTAAAA+TGG + chr4_4:79198555-79198574 Msa0706230:intron 30.0%
! CAAATGTAGAAGGTTTTTCT+TGG - chr4_4:79198649-79198668 None:intergenic 30.0%
ATTTCTTAACTTATGCCTCA+AGG + chr4_4:79198669-79198688 Msa0706230:intron 30.0%
TTTCTTAACTTATGCCTCAA+GGG + chr4_4:79198670-79198689 Msa0706230:intron 30.0%
! AATATTGGCTGTAGAAAATC+TGG - chr4_4:79198752-79198771 None:intergenic 30.0%
TTTGTAAGTGTACCTTAGAA+GGG + chr4_4:79198819-79198838 Msa0706230:intron 30.0%
ACATAATCCACAATTCAAGT+TGG - chr4_4:79199119-79199138 None:intergenic 30.0%
ATTACAAATATGCATGGTAG+AGG - chr4_4:79199305-79199324 None:intergenic 30.0%
CCCAATGATAAGTATACTAA+AGG + chr4_4:79199499-79199518 Msa0706230:CDS 30.0%
GATAAGTATACTAAAGGACA+TGG + chr4_4:79199505-79199524 Msa0706230:CDS 30.0%
!! GTTCCTTTGATTGGTTTAAA+GGG + chr4_4:79199669-79199688 Msa0706230:CDS 30.0%
!! TTCCTTTGATTGGTTTAAAG+GGG + chr4_4:79199670-79199689 Msa0706230:CDS 30.0%
AATTGTCACATTCCATAAGT+GGG - chr4_4:79199943-79199962 None:intergenic 30.0%
ACGAAACACGTCAAATAAAA+AGG - chr4_4:79200109-79200128 None:intergenic 30.0%
ACTATAGGTTATCAACGAAA+GGG - chr4_4:79200393-79200412 None:intergenic 30.0%
TTGGTATATAAGCACACTAT+AGG - chr4_4:79200408-79200427 None:intergenic 30.0%
ATAGTGTGCTTATATACCAA+TGG + chr4_4:79200408-79200427 Msa0706230:three_prime_UTR 30.0%
CAAAGCTATAAAACAACCAT+TGG - chr4_4:79200427-79200446 None:intergenic 30.0%
!! ATAGCTTTGTAAAAGGACTA+AGG + chr4_4:79200438-79200457 Msa0706230:three_prime_UTR 30.0%
AAAACAAAAAAGCCTTCTCA+TGG - chr4_4:79200594-79200613 None:intergenic 30.0%
TGACAATCAAAACAGCAACA+TGG + chr4_4:79194525-79194544 Msa0706230:exon 35.0%
GACAATCAAAACAGCAACAT+GGG + chr4_4:79194526-79194545 Msa0706230:exon 35.0%
! TTAACTTTGTGCTGTTCTCA+GGG - chr4_4:79194603-79194622 None:intergenic 35.0%
CTGCATCTTCTTCTTTGTTA+TGG - chr4_4:79194660-79194679 None:intergenic 35.0%
! TACAGTTTTCACACTGTGTA+AGG - chr4_4:79194725-79194744 None:intergenic 35.0%
AACTGTAACAGAAAGTGACA+TGG + chr4_4:79194738-79194757 Msa0706230:CDS 35.0%
ACTGTAACAGAAAGTGACAT+GGG + chr4_4:79194739-79194758 Msa0706230:CDS 35.0%
ATGAGAAACAGTCTTTGACT+GGG + chr4_4:79194773-79194792 Msa0706230:CDS 35.0%
TTTATCAGCAAGACTGATGT+TGG + chr4_4:79194958-79194977 Msa0706230:CDS 35.0%
ACTCTCTTTGCTAAATGCAT+AGG + chr4_4:79195051-79195070 Msa0706230:CDS 35.0%
AGGATTGAATGAAGAGTCAA+AGG + chr4_4:79195298-79195317 Msa0706230:intron 35.0%
!! ATCAAAAAGCATCTCAGCAT+AGG - chr4_4:79195324-79195343 None:intergenic 35.0%
!! TGCTTTTTGATACTCTTGCT+CGG + chr4_4:79195333-79195352 Msa0706230:CDS 35.0%
GATCAACAAGATCCAGTTTA+GGG + chr4_4:79195379-79195398 Msa0706230:CDS 35.0%
AAGATATATCCTGTGTCATC+CGG - chr4_4:79195862-79195881 None:intergenic 35.0%
!!! TAAGCTTTTGGCTTAGCATT+TGG - chr4_4:79196056-79196075 None:intergenic 35.0%
AAATGCTAAGCCAAAAGCTT+AGG + chr4_4:79196055-79196074 Msa0706230:CDS 35.0%
ATAGGATTTCCCTCAAATGT+AGG - chr4_4:79196081-79196100 None:intergenic 35.0%
TTGAGGGAAATCCTATTAAG+AGG + chr4_4:79196085-79196104 Msa0706230:CDS 35.0%
AAGATCTGCATATGAAGTGA+TGG + chr4_4:79196224-79196243 Msa0706230:CDS 35.0%
AGATCTGCATATGAAGTGAT+GGG + chr4_4:79196225-79196244 Msa0706230:CDS 35.0%
GCAAACAGGCAATAAGATAA+TGG - chr4_4:79196304-79196323 None:intergenic 35.0%
! GCTTTTGTTCCTTTTGATGA+TGG + chr4_4:79196366-79196385 Msa0706230:CDS 35.0%
AAATTGAGGCCATCATCAAA+AGG - chr4_4:79196378-79196397 None:intergenic 35.0%
AAGTATCTTGTCACTCTTGA+TGG - chr4_4:79196430-79196449 None:intergenic 35.0%
! ATTTTTGCAGATGATAGCTC+TGG + chr4_4:79196570-79196589 Msa0706230:intron 35.0%
!! ATAGCTCTGGCAATATCAAT+TGG + chr4_4:79196583-79196602 Msa0706230:CDS 35.0%
!!! AAGCTGATTGAGCCTTTTTT+CGG + chr4_4:79196679-79196698 Msa0706230:CDS 35.0%
ACAAAATGCCAGTAGTTTGA+TGG - chr4_4:79196712-79196731 None:intergenic 35.0%
! ACTGGCATTTTGTCAAATCA+TGG + chr4_4:79196719-79196738 Msa0706230:CDS 35.0%
! CTGGCATTTTGTCAAATCAT+GGG + chr4_4:79196720-79196739 Msa0706230:CDS 35.0%
! CATTTTGTCAAATCATGGGA+AGG + chr4_4:79196724-79196743 Msa0706230:CDS 35.0%
! TTTTGTCAAATCATGGGAAG+GGG + chr4_4:79196726-79196745 Msa0706230:CDS 35.0%
!! AAACCTGTGAGTTTGTTGAA+GGG - chr4_4:79196841-79196860 None:intergenic 35.0%
! TCAAGTAAAGTTTGGTTCCA+TGG - chr4_4:79196921-79196940 None:intergenic 35.0%
! TGAAGGTCCTAACTGTTTTA+TGG - chr4_4:79196957-79196976 None:intergenic 35.0%
TTTGTAGACTTGGATGTATC+TGG + chr4_4:79197051-79197070 Msa0706230:intron 35.0%
TCCAATGCATAAATGGTGAT+GGG - chr4_4:79197082-79197101 None:intergenic 35.0%
AAGTCTCTCCAATGCATAAA+TGG - chr4_4:79197089-79197108 None:intergenic 35.0%
TGTTTATCCTGGAAATGTGT+TGG + chr4_4:79197298-79197317 Msa0706230:CDS 35.0%
TTAATTGCCAACACATTTCC+AGG - chr4_4:79197308-79197327 None:intergenic 35.0%
CTCTTATAGCTAAATCCTTG+AGG - chr4_4:79197341-79197360 None:intergenic 35.0%
CAAGGATTTAGCTATAAGAG+TGG + chr4_4:79197341-79197360 Msa0706230:CDS 35.0%
ACAAATCCATACCATTCAAG+TGG - chr4_4:79197401-79197420 None:intergenic 35.0%
TCTGAAAACCAAATTCTCAC+AGG + chr4_4:79197635-79197654 Msa0706230:CDS 35.0%
TCAGGAAAAGCCTATAACTA+AGG + chr4_4:79198094-79198113 Msa0706230:intron 35.0%
AGTGTCCTAACCTTAGTTAT+AGG - chr4_4:79198107-79198126 None:intergenic 35.0%
GTAAGGTCTTTACATTCGTT+TGG - chr4_4:79198169-79198188 None:intergenic 35.0%
!! TAGAAAATCTGGATTGGCTT+TGG - chr4_4:79198741-79198760 None:intergenic 35.0%
GTTTGTAAGTGTACCTTAGA+AGG + chr4_4:79198818-79198837 Msa0706230:intron 35.0%
ATCAGCGTTTGCATGATTAT+TGG - chr4_4:79199276-79199295 None:intergenic 35.0%
!! TTCCCTAAAGTTTTGATCGA+TGG + chr4_4:79199401-79199420 Msa0706230:CDS 35.0%
GACCATCGATCAAAACTTTA+GGG - chr4_4:79199406-79199425 None:intergenic 35.0%
!! TATGAGGTGGTTTTACTTGT+GGG + chr4_4:79199458-79199477 Msa0706230:CDS 35.0%
GGACATGGTCAATAATTTCA+AGG + chr4_4:79199520-79199539 Msa0706230:CDS 35.0%
TAATTTCAAGGCCATGGAAA+AGG + chr4_4:79199532-79199551 Msa0706230:CDS 35.0%
!! GGTTCCTTTGATTGGTTTAA+AGG + chr4_4:79199668-79199687 Msa0706230:CDS 35.0%
TCTATAAACCATGCAAAGCA+CGG + chr4_4:79199806-79199825 Msa0706230:CDS 35.0%
! CTCATTTTGCTAAACCCAAT+TGG + chr4_4:79199861-79199880 Msa0706230:CDS 35.0%
CAATTGTCACATTCCATAAG+TGG - chr4_4:79199944-79199963 None:intergenic 35.0%
TAATTGAGGATAACAGTGGA+AGG + chr4_4:79200309-79200328 Msa0706230:three_prime_UTR 35.0%
CACTATAGGTTATCAACGAA+AGG - chr4_4:79200394-79200413 None:intergenic 35.0%
TAAAAGGACTAAGGTAAACG+TGG + chr4_4:79200447-79200466 Msa0706230:three_prime_UTR 35.0%
AAAAGGACTAAGGTAAACGT+GGG + chr4_4:79200448-79200467 Msa0706230:three_prime_UTR 35.0%
AGTTGGCTACCAAATACTAA+AGG + chr4_4:79200489-79200508 Msa0706230:three_prime_UTR 35.0%
GGAAATAGATAACCATGAGA+AGG + chr4_4:79200579-79200598 Msa0706230:three_prime_UTR 35.0%
TCATTCATTATAGTCATCCC+AGG + chr4_4:79200626-79200645 Msa0706230:three_prime_UTR 35.0%
AATCAAAACAGCAACATGGG+AGG + chr4_4:79194529-79194548 Msa0706230:exon 40.0%
! TAACTTTGTGCTGTTCTCAG+GGG - chr4_4:79194602-79194621 None:intergenic 40.0%
! CTTAACTTTGTGCTGTTCTC+AGG - chr4_4:79194604-79194623 None:intergenic 40.0%
AGAAGATGCAGACTATGTTG+AGG + chr4_4:79194669-79194688 Msa0706230:CDS 40.0%
CATGAGAAACAGTCTTTGAC+TGG + chr4_4:79194772-79194791 Msa0706230:CDS 40.0%
!! GAAATCATTTGGTGCTTCAG+TGG + chr4_4:79194813-79194832 Msa0706230:CDS 40.0%
! TATAAAGCAGCTGAAGCGTT+TGG + chr4_4:79194855-79194874 Msa0706230:CDS 40.0%
AAGATAACCGTCAGTTGTCA+CGG - chr4_4:79195025-79195044 None:intergenic 40.0%
CGATCAACAAGATCCAGTTT+AGG + chr4_4:79195378-79195397 Msa0706230:CDS 40.0%
! CTGACCAAAGCTTTGATACT+AGG + chr4_4:79195420-79195439 Msa0706230:CDS 40.0%
TGAGCCTAGTATCAAAGCTT+TGG - chr4_4:79195427-79195446 None:intergenic 40.0%
AGATGCAGATGGAAGAATCA+CGG + chr4_4:79195557-79195576 Msa0706230:CDS 40.0%
CTGGATGTTTGACAGTTTGT+TGG - chr4_4:79195794-79195813 None:intergenic 40.0%
AAACATCCAGAAACAAGCAG+AGG + chr4_4:79195804-79195823 Msa0706230:CDS 40.0%
CATATTCCTCTGCTTGTTTC+TGG - chr4_4:79195813-79195832 None:intergenic 40.0%
GAAACAAGCAGAGGAATATG+CGG + chr4_4:79195813-79195832 Msa0706230:CDS 40.0%
AGATATATCCTGTGTCATCC+GGG - chr4_4:79195861-79195880 None:intergenic 40.0%
GGATGACACAGGATATATCT+TGG + chr4_4:79195861-79195880 Msa0706230:CDS 40.0%
CTCGAGACTCTCTTATTACA+TGG + chr4_4:79195991-79196010 Msa0706230:CDS 40.0%
ATGGACCAGAAGAAACTACA+AGG + chr4_4:79196010-79196029 Msa0706230:CDS 40.0%
TGGACCAGAAGAAACTACAA+GGG + chr4_4:79196011-79196030 Msa0706230:CDS 40.0%
! CAAATGTAGGCCTAAGCTTT+TGG - chr4_4:79196068-79196087 None:intergenic 40.0%
AAAGCTTAGGCCTACATTTG+AGG + chr4_4:79196068-79196087 Msa0706230:CDS 40.0%
AAGCTTAGGCCTACATTTGA+GGG + chr4_4:79196069-79196088 Msa0706230:CDS 40.0%
AGGGAAATCCTATTAAGAGG+TGG + chr4_4:79196088-79196107 Msa0706230:CDS 40.0%
TCTCTACACCACCTCTTAAT+AGG - chr4_4:79196099-79196118 None:intergenic 40.0%
AGATACCAAGTACTTCTTCC+AGG + chr4_4:79196116-79196135 Msa0706230:CDS 40.0%
!! GTTATCCTGGAAGAAGTACT+TGG - chr4_4:79196124-79196143 None:intergenic 40.0%
AGTACTTCTTCCAGGATAAC+TGG + chr4_4:79196124-79196143 Msa0706230:CDS 40.0%
AAAGGCAAATAGGCCTAACA+TGG - chr4_4:79196184-79196203 None:intergenic 40.0%
GATCTGCATATGAAGTGATG+GGG + chr4_4:79196226-79196245 Msa0706230:CDS 40.0%
! TGATGGCCTCAATTTTCACA+AGG + chr4_4:79196383-79196402 Msa0706230:CDS 40.0%
CGATTATAGCAGCTTTCACA+AGG + chr4_4:79196532-79196551 Msa0706230:intron 40.0%
CTGGCAATATCAATTGGTGT+TGG + chr4_4:79196589-79196608 Msa0706230:CDS 40.0%
GATGGTTTCTCTCCGAAAAA+AGG - chr4_4:79196694-79196713 None:intergenic 40.0%
GAGAGAAACCATCAAACTAC+TGG + chr4_4:79196701-79196720 Msa0706230:CDS 40.0%
AGGGGTAACAGGAATTCTAA+TGG + chr4_4:79196744-79196763 Msa0706230:CDS 40.0%
AATGGCAATAGCCTTTACAC+TGG + chr4_4:79196774-79196793 Msa0706230:CDS 40.0%
ATTCCTCCTGAACCTAGTAT+TGG - chr4_4:79196800-79196819 None:intergenic 40.0%
GTTGAAGGGTTTAGGTAGTT+TGG - chr4_4:79196827-79196846 None:intergenic 40.0%
!! GTGAGTTTGTTGAAGGGTTT+AGG - chr4_4:79196835-79196854 None:intergenic 40.0%
AAACCCTTCAACAAACTCAC+AGG + chr4_4:79196835-79196854 Msa0706230:CDS 40.0%
!! GAAACCTGTGAGTTTGTTGA+AGG - chr4_4:79196842-79196861 None:intergenic 40.0%
! TCACAGGTTTCAATGCCTTT+TGG + chr4_4:79196851-79196870 Msa0706230:CDS 40.0%
GAGGTGATGAGAATACCAAA+AGG - chr4_4:79196869-79196888 None:intergenic 40.0%
! TATGCCCTGTTGATTATCCA+TGG + chr4_4:79196901-79196920 Msa0706230:CDS 40.0%
GGTTCCATGGATAATCAACA+GGG - chr4_4:79196908-79196927 None:intergenic 40.0%
TGGTTCCATGGATAATCAAC+AGG - chr4_4:79196909-79196928 None:intergenic 40.0%
CCAAAGTAAGGGTTAACTGA+AGG - chr4_4:79196974-79196993 None:intergenic 40.0%
CCTTCAGTTAACCCTTACTT+TGG + chr4_4:79196971-79196990 Msa0706230:intron 40.0%
TCCCATCACCATTTATGCAT+TGG + chr4_4:79197078-79197097 Msa0706230:CDS 40.0%
CTCCAATGCATAAATGGTGA+TGG - chr4_4:79197083-79197102 None:intergenic 40.0%
CAAGTCTGTGCGAATATTGA+AGG + chr4_4:79197132-79197151 Msa0706230:CDS 40.0%
TTAAAGGTGGCTGTTTATCC+TGG + chr4_4:79197287-79197306 Msa0706230:intron 40.0%
GTTTCTCCACTTGAATGGTA+TGG + chr4_4:79197392-79197411 Msa0706230:intron 40.0%
ATCATTAGGGGCAGAAGTTA+TGG - chr4_4:79197568-79197587 None:intergenic 40.0%
CTAAGAGCTGAATGCTTGAA+AGG + chr4_4:79197857-79197876 Msa0706230:CDS 40.0%
GCAAAAACTGTAGTTGGCTA+CGG + chr4_4:79197974-79197993 Msa0706230:intron 40.0%
ACATGGAACTCACTAGTTGT+GGG - chr4_4:79198039-79198058 None:intergenic 40.0%
AACATGGAACTCACTAGTTG+TGG - chr4_4:79198040-79198059 None:intergenic 40.0%
ACAACTAGTGAGTTCCATGT+TGG + chr4_4:79198039-79198058 Msa0706230:intron 40.0%
ACAGGTGAAGTTAACCAACA+TGG - chr4_4:79198056-79198075 None:intergenic 40.0%
!! TCATGTTAACTTGTGCCCTT+AGG + chr4_4:79198530-79198549 Msa0706230:intron 40.0%
!! CATGTTAACTTGTGCCCTTA+GGG + chr4_4:79198531-79198550 Msa0706230:intron 40.0%
!! AATGTTAACTTGTGCCCTTG+AGG - chr4_4:79198687-79198706 None:intergenic 40.0%
TGGCTGTAGAAAATCTGGAT+TGG - chr4_4:79198747-79198766 None:intergenic 40.0%
AGAGACTTGCATTAGATACC+TGG - chr4_4:79198852-79198871 None:intergenic 40.0%
GCATTAGATACCTGGTAAGA+AGG - chr4_4:79198844-79198863 None:intergenic 40.0%
AGAGACTTGCATTAGATACC+TGG - chr4_4:79198852-79198871 None:intergenic 40.0%
!! CGAGTTAGTATTTTGGAGGA+GGG - chr4_4:79199076-79199095 None:intergenic 40.0%
! CATAGCGCGAGTTAGTATTT+TGG - chr4_4:79199083-79199102 None:intergenic 40.0%
TTCTGAGCCAACTTGAATTG+TGG + chr4_4:79199109-79199128 Msa0706230:intron 40.0%
TTGCCTGACAGATATTTCAC+AGG + chr4_4:79199235-79199254 Msa0706230:intron 40.0%
GGACCATCGATCAAAACTTT+AGG - chr4_4:79199407-79199426 None:intergenic 40.0%
!! GTTTTGATCGATGGTCCATA+TGG + chr4_4:79199410-79199429 Msa0706230:CDS 40.0%
!! GTATGAGGTGGTTTTACTTG+TGG + chr4_4:79199457-79199476 Msa0706230:CDS 40.0%
!! ATGAGGTGGTTTTACTTGTG+GGG + chr4_4:79199459-79199478 Msa0706230:CDS 40.0%
GGTCAATAATTTCAAGGCCA+TGG + chr4_4:79199526-79199545 Msa0706230:CDS 40.0%
! AAACCCATCTTCCTTTTCCA+TGG - chr4_4:79199546-79199565 None:intergenic 40.0%
! AAAGGAAGATGGGTTTGCAA+TGG + chr4_4:79199550-79199569 Msa0706230:CDS 40.0%
ATGGGTTTGCAATGGAAGAA+GGG + chr4_4:79199558-79199577 Msa0706230:CDS 40.0%
!! TCTTTCTGGTTGGTTGTCAT+TGG - chr4_4:79199587-79199606 None:intergenic 40.0%
CACCCCTTTAAACCAATCAA+AGG - chr4_4:79199675-79199694 None:intergenic 40.0%
TTGTAGACAGTTCGCCAATT+GGG - chr4_4:79199878-79199897 None:intergenic 40.0%
TTTGTAGACAGTTCGCCAAT+TGG - chr4_4:79199879-79199898 None:intergenic 40.0%
ACGCATTGCACTTAATCATC+CGG + chr4_4:79199898-79199917 Msa0706230:CDS 40.0%
!!! AATGCAGGGGTATTTTACTG+CGG + chr4_4:79200181-79200200 Msa0706230:intron 40.0%
TTATAGCTGAGTCATCTTGG+TGG - chr4_4:79200354-79200373 None:intergenic 40.0%
CGATTATAGCTGAGTCATCT+TGG - chr4_4:79200357-79200376 None:intergenic 40.0%
ATAGGTTATCAACGAAAGGG+TGG - chr4_4:79200390-79200409 None:intergenic 40.0%
AAAGGACTAAGGTAAACGTG+GGG + chr4_4:79200449-79200468 Msa0706230:three_prime_UTR 40.0%
TAAGGTAAACGTGGGGTAAA+TGG + chr4_4:79200456-79200475 Msa0706230:three_prime_UTR 40.0%
TAAACGTGGGGTAAATGGTT+AGG + chr4_4:79200461-79200480 Msa0706230:three_prime_UTR 40.0%
TAAATGGTTAGGTGGTGAGT+TGG + chr4_4:79200472-79200491 Msa0706230:three_prime_UTR 40.0%
GCTACCAAATACTAAAGGTG+AGG + chr4_4:79200494-79200513 Msa0706230:three_prime_UTR 40.0%
CCTACCTCACCTTTAGTATT+TGG - chr4_4:79200501-79200520 None:intergenic 40.0%
CCAAATACTAAAGGTGAGGT+AGG + chr4_4:79200498-79200517 Msa0706230:three_prime_UTR 40.0%
ATACTAAAGGTGAGGTAGGA+TGG + chr4_4:79200502-79200521 Msa0706230:three_prime_UTR 40.0%
ATGACGACACACTTATGCAA+GGG - chr4_4:79200530-79200549 None:intergenic 40.0%
ATTATAGTCATCCCAGGAGA+AGG + chr4_4:79200632-79200651 Msa0706230:three_prime_UTR 40.0%
TTATAGTCATCCCAGGAGAA+GGG + chr4_4:79200633-79200652 Msa0706230:three_prime_UTR 40.0%
TGGAAGGAAGTAAATCAGGA+GGG + chr4_4:79200659-79200678 Msa0706230:three_prime_UTR 40.0%
GTCAACATCTGTGACAGCTT+TGG - chr4_4:79194638-79194657 None:intergenic 45.0%
AGACTATGTTGAGGTGACCA+TGG + chr4_4:79194678-79194697 Msa0706230:CDS 45.0%
AGAGTCACCTTGAATGTCCA+TGG - chr4_4:79194698-79194717 None:intergenic 45.0%
ACAGAAAGTGACATGGGAGA+AGG + chr4_4:79194745-79194764 Msa0706230:CDS 45.0%
CAGAAAGTGACATGGGAGAA+GGG + chr4_4:79194746-79194765 Msa0706230:CDS 45.0%
AGAAAGTGACATGGGAGAAG+GGG + chr4_4:79194747-79194766 Msa0706230:CDS 45.0%
GTCTTTGACTGGGAACAAGT+TGG + chr4_4:79194783-79194802 Msa0706230:CDS 45.0%
ACCAGAACCAGCAAAACGAT+TGG + chr4_4:79194891-79194910 Msa0706230:CDS 45.0%
!!! TCCAATCGTTTTGCTGGTTC+TGG - chr4_4:79194895-79194914 None:intergenic 45.0%
AACCAGCAAAACGATTGGAG+AGG + chr4_4:79194896-79194915 Msa0706230:CDS 45.0%
AAGCTTACCGTGACAACTGA+CGG + chr4_4:79195015-79195034 Msa0706230:CDS 45.0%
! CATTTAGCAAAGAGAGTGCG+AGG - chr4_4:79195048-79195067 None:intergenic 45.0%
AGATCCAGTTTAGGGAGTTC+TGG + chr4_4:79195387-79195406 Msa0706230:CDS 45.0%
GATCCAGTTTAGGGAGTTCT+GGG + chr4_4:79195388-79195407 Msa0706230:CDS 45.0%
AGGGTTGACAAAGATGCAGA+TGG + chr4_4:79195546-79195565 Msa0706230:intron 45.0%
!! GTTTGACAGTTTGTTGGCAG+TGG - chr4_4:79195788-79195807 None:intergenic 45.0%
! GGAATATGCGGCTTTGATCA+TGG + chr4_4:79195825-79195844 Msa0706230:CDS 45.0%
GATCATGGAAGAACTAGACC+CGG + chr4_4:79195840-79195859 Msa0706230:CDS 45.0%
GGACCAGAAGAAACTACAAG+GGG + chr4_4:79196012-79196031 Msa0706230:CDS 45.0%
TCTCCCCTTGTAGTTTCTTC+TGG - chr4_4:79196018-79196037 None:intergenic 45.0%
! TTTGGCTTAGCATTTGGCTC+AGG - chr4_4:79196050-79196069 None:intergenic 45.0%
AATCCACAGAGCAAATACCC+AGG - chr4_4:79196157-79196176 None:intergenic 45.0%
TGGGTATTTGCTCTGTGGAT+TGG + chr4_4:79196156-79196175 Msa0706230:CDS 45.0%
ACTGTGTGTGCATGGCAAAA+GGG + chr4_4:79196250-79196269 Msa0706230:CDS 45.0%
TTTGCCGAAACACCATCACT+TGG + chr4_4:79196319-79196338 Msa0706230:CDS 45.0%
! TGAGCCAAGTGATGGTGTTT+CGG - chr4_4:79196326-79196345 None:intergenic 45.0%
!! AGGAACAAAAGCACCTAGCT+TGG - chr4_4:79196358-79196377 None:intergenic 45.0%
TTGCTTGCATGAAGAATGCG+AGG - chr4_4:79196649-79196668 None:intergenic 45.0%
AAATCATGGGAAGGGGTAAC+AGG + chr4_4:79196733-79196752 Msa0706230:CDS 45.0%
!! CCTAGTATTGGCCAGTGTAA+AGG - chr4_4:79196788-79196807 None:intergenic 45.0%
CCTTTACACTGGCCAATACT+AGG + chr4_4:79196785-79196804 Msa0706230:CDS 45.0%
GGGCATACACAATGATGAAG+AGG - chr4_4:79196888-79196907 None:intergenic 45.0%
!! CTGCTGTTTCTCCACTTGAA+TGG + chr4_4:79197387-79197406 Msa0706230:CDS 45.0%
GGGGCAGAAGTTATGGAAAA+TGG - chr4_4:79197561-79197580 None:intergenic 45.0%
AAGTCCACTCTGTCCATTGA+TGG - chr4_4:79197837-79197856 None:intergenic 45.0%
TGAAAGGAGATAACAGCCCA+AGG + chr4_4:79197873-79197892 Msa0706230:CDS 45.0%
!! CTCCTTAACTTGTGCCCTAA+GGG - chr4_4:79198548-79198567 None:intergenic 45.0%
TCTCCAGCCAAACTCTTTGT+TGG + chr4_4:79198783-79198802 Msa0706230:intron 45.0%
CCAAACTCTTTGTTGGCGTA+GGG + chr4_4:79198790-79198809 Msa0706230:intron 45.0%
!! GCGAGTTAGTATTTTGGAGG+AGG - chr4_4:79199077-79199096 None:intergenic 45.0%
!! AGCGCGAGTTAGTATTTTGG+AGG - chr4_4:79199080-79199099 None:intergenic 45.0%
CCACCTGTGAAATATCTGTC+AGG - chr4_4:79199241-79199260 None:intergenic 45.0%
CCTGACAGATATTTCACAGG+TGG + chr4_4:79199238-79199257 Msa0706230:intron 45.0%
! ACAAGACTACAGGGAGTATG+AGG + chr4_4:79199442-79199461 Msa0706230:CDS 45.0%
AAGGCCATGGAAAAGGAAGA+TGG + chr4_4:79199539-79199558 Msa0706230:CDS 45.0%
AGGCCATGGAAAAGGAAGAT+GGG + chr4_4:79199540-79199559 Msa0706230:CDS 45.0%
! GATGGGTTTGCAATGGAAGA+AGG + chr4_4:79199557-79199576 Msa0706230:CDS 45.0%
CAACCAACCAGAAAGACTCT+AGG + chr4_4:79199591-79199610 Msa0706230:CDS 45.0%
! GAACCTAGAGTCTTTCTGGT+TGG - chr4_4:79199597-79199616 None:intergenic 45.0%
CACTGAACCTAGAGTCTTTC+TGG - chr4_4:79199601-79199620 None:intergenic 45.0%
! CAGGAGGGCATACTTCTATT+GGG + chr4_4:79199631-79199650 Msa0706230:CDS 45.0%
TATTGGGTGACAAGAGAGCA+GGG + chr4_4:79199647-79199666 Msa0706230:CDS 45.0%
GGTGATGAATGATGTAGCTG+AGG + chr4_4:79199691-79199710 Msa0706230:CDS 45.0%
GATGAATGATGTAGCTGAGG+AGG + chr4_4:79199694-79199713 Msa0706230:CDS 45.0%
ATGTAGCTGAGGAGGATAGA+AGG + chr4_4:79199702-79199721 Msa0706230:CDS 45.0%
TGTAGCTGAGGAGGATAGAA+GGG + chr4_4:79199703-79199722 Msa0706230:CDS 45.0%
! AATCATCCGGAAGCACAAGT+TGG + chr4_4:79199911-79199930 Msa0706230:CDS 45.0%
AACTCACCAACTTGTGCTTC+CGG - chr4_4:79199920-79199939 None:intergenic 45.0%
!! AGTTGGTGAGTTCCCACTTA+TGG + chr4_4:79199928-79199947 Msa0706230:intron 45.0%
!!! ATGCAGGGGTATTTTACTGC+GGG + chr4_4:79200182-79200201 Msa0706230:intron 45.0%
TTGAGGATAACAGTGGAAGG+TGG + chr4_4:79200312-79200331 Msa0706230:three_prime_UTR 45.0%
TGAGGATAACAGTGGAAGGT+GGG + chr4_4:79200313-79200332 Msa0706230:three_prime_UTR 45.0%
TGACGACACACTTATGCAAG+GGG - chr4_4:79200529-79200548 None:intergenic 45.0%
CATGACGACACACTTATGCA+AGG - chr4_4:79200531-79200550 None:intergenic 45.0%
GACCTGGAAGGAAGTAAATC+AGG + chr4_4:79200655-79200674 Msa0706230:three_prime_UTR 45.0%
CTCCTGATTTACTTCCTTCC+AGG - chr4_4:79200660-79200679 None:intergenic 45.0%
CTGGAAGGAAGTAAATCAGG+AGG + chr4_4:79200658-79200677 Msa0706230:three_prime_UTR 45.0%
!! ATTCATAAAAAAATTAATAT+TGG - chr4_4:79198888-79198907 None:intergenic 5.0%
GAGGTGACCATGGACATTCA+AGG + chr4_4:79194688-79194707 Msa0706230:CDS 50.0%
! GTCCTCTCCAATCGTTTTGC+TGG - chr4_4:79194901-79194920 None:intergenic 50.0%
AGCAAGACTGATGTTGGTGC+AGG + chr4_4:79194964-79194983 Msa0706230:CDS 50.0%
AGACTGATGTTGGTGCAGGA+TGG + chr4_4:79194968-79194987 Msa0706230:CDS 50.0%
ATACTCTTGCTCGGCAGAGA+GGG + chr4_4:79195342-79195361 Msa0706230:CDS 50.0%
AGTCCCAGAACTCCCTAAAC+TGG - chr4_4:79195394-79195413 None:intergenic 50.0%
TGCAGATGGAAGAATCACGG+AGG + chr4_4:79195560-79195579 Msa0706230:CDS 50.0%
AGGATCTTCGCCAGTTATCC+TGG - chr4_4:79196137-79196156 None:intergenic 50.0%
AGGATAACTGGCGAAGATCC+TGG + chr4_4:79196136-79196155 Msa0706230:CDS 50.0%
GGATAACTGGCGAAGATCCT+GGG + chr4_4:79196137-79196156 Msa0706230:CDS 50.0%
GATCCTGGGTATTTGCTCTG+TGG + chr4_4:79196151-79196170 Msa0706230:CDS 50.0%
!! CTGTGGATTGGTGCCATGTT+AGG + chr4_4:79196168-79196187 Msa0706230:CDS 50.0%
CACTGTGTGTGCATGGCAAA+AGG + chr4_4:79196249-79196268 Msa0706230:CDS 50.0%
CTGTGTGTGCATGGCAAAAG+GGG + chr4_4:79196251-79196270 Msa0706230:CDS 50.0%
! GTGATGGTGTTTCGGCAAAC+AGG - chr4_4:79196318-79196337 None:intergenic 50.0%
GAAACACCATCACTTGGCTC+AGG + chr4_4:79196325-79196344 Msa0706230:CDS 50.0%
CCTATTCCTGAGCCAAGTGA+TGG - chr4_4:79196334-79196353 None:intergenic 50.0%
CCATCACTTGGCTCAGGAAT+AGG + chr4_4:79196331-79196350 Msa0706230:CDS 50.0%
CTCAGGAATAGGACCAAGCT+AGG + chr4_4:79196342-79196361 Msa0706230:CDS 50.0%
CACTGGCCAATACTAGGTTC+AGG + chr4_4:79196791-79196810 Msa0706230:CDS 50.0%
TGGCCAATACTAGGTTCAGG+AGG + chr4_4:79196794-79196813 Msa0706230:CDS 50.0%
! GGCATGTGTCAAGTTGCCAT+GGG - chr4_4:79198376-79198395 None:intergenic 50.0%
TGCCCTTAGGGCACAAGTTA+AGG + chr4_4:79198543-79198562 Msa0706230:intron 50.0%
!! GCTCCTTAACTTGTGCCCTA+AGG - chr4_4:79198549-79198568 None:intergenic 50.0%
ACGCCAACAAAGAGTTTGGC+TGG - chr4_4:79198789-79198808 None:intergenic 50.0%
GCCAAACTCTTTGTTGGCGT+AGG + chr4_4:79198789-79198808 Msa0706230:intron 50.0%
CCCTACGCCAACAAAGAGTT+TGG - chr4_4:79198793-79198812 None:intergenic 50.0%
CCTGGTAAGAAGCCCTTCTA+AGG - chr4_4:79198834-79198853 None:intergenic 50.0%
CCTTAGAAGGGCTTCTTACC+AGG + chr4_4:79198831-79198850 Msa0706230:intron 50.0%
CTGGTAAGAAGGCCCTTCTA+AGG - chr4_4:79198940-79198959 None:intergenic 50.0%
CTTAGAAGGGCCTTCTTACC+AGG + chr4_4:79198938-79198957 Msa0706230:intron 50.0%
!! TACTCCCTGTAGTCTTGTGC+TGG - chr4_4:79199440-79199459 None:intergenic 50.0%
! AGACTACAGGGAGTATGAGG+TGG + chr4_4:79199445-79199464 Msa0706230:CDS 50.0%
!! GTGGTTTTACTTGTGGGGCT+GGG + chr4_4:79199464-79199483 Msa0706230:CDS 50.0%
TTACTTGTGGGGCTGGGAAT+AGG + chr4_4:79199470-79199489 Msa0706230:CDS 50.0%
TACTTGTGGGGCTGGGAATA+GGG + chr4_4:79199471-79199490 Msa0706230:CDS 50.0%
GGTTCAGTGACTTCAAGACC+AGG + chr4_4:79199612-79199631 Msa0706230:CDS 50.0%
TCAGTGACTTCAAGACCAGG+AGG + chr4_4:79199615-79199634 Msa0706230:CDS 50.0%
CAGTGACTTCAAGACCAGGA+GGG + chr4_4:79199616-79199635 Msa0706230:CDS 50.0%
! CCAATAGAAGTATGCCCTCC+TGG - chr4_4:79199633-79199652 None:intergenic 50.0%
! CCAGGAGGGCATACTTCTAT+TGG + chr4_4:79199630-79199649 Msa0706230:CDS 50.0%
CTATTGGGTGACAAGAGAGC+AGG + chr4_4:79199646-79199665 Msa0706230:CDS 50.0%
GAGAGCAGGGTTCCTTTGAT+TGG + chr4_4:79199660-79199679 Msa0706230:CDS 50.0%
GTAGCTGAGGAGGATAGAAG+GGG + chr4_4:79199704-79199723 Msa0706230:CDS 50.0%
TGCACCAGCGTTTACGAACA+GGG + chr4_4:79199749-79199768 Msa0706230:CDS 50.0%
ATCACCCTGTTCGTAAACGC+TGG - chr4_4:79199756-79199775 None:intergenic 50.0%
TCGCTCTGCTCTTATCGCTA+TGG + chr4_4:79199778-79199797 Msa0706230:CDS 50.0%
AAACCATGCAAAGCACGGTG+TGG + chr4_4:79199811-79199830 Msa0706230:CDS 50.0%
ATGAGACATGACACGAGTGC+CGG - chr4_4:79199846-79199865 None:intergenic 50.0%
GAGGATAACAGTGGAAGGTG+GGG + chr4_4:79200314-79200333 Msa0706230:three_prime_UTR 50.0%
TAGCTGAGTCATCTTGGTGG+AGG - chr4_4:79200351-79200370 None:intergenic 50.0%
ACGTGGGGTAAATGGTTAGG+TGG + chr4_4:79200464-79200483 Msa0706230:three_prime_UTR 50.0%
GACGACACACTTATGCAAGG+GGG - chr4_4:79200528-79200547 None:intergenic 50.0%
AGCATGAGCCACTGCAGACT+TGG - chr4_4:79194923-79194942 None:intergenic 55.0%
GATACTCTTGCTCGGCAGAG+AGG + chr4_4:79195341-79195360 Msa0706230:CDS 55.0%
GAACTAGACCCGGATGACAC+AGG + chr4_4:79195850-79195869 Msa0706230:CDS 55.0%
! TCTGTCCATTGATGGCTGGC+TGG - chr4_4:79197829-79197848 None:intergenic 55.0%
! CCACTCTGTCCATTGATGGC+TGG - chr4_4:79197833-79197852 None:intergenic 55.0%
CCAGCCATCAATGGACAGAG+TGG + chr4_4:79197830-79197849 Msa0706230:CDS 55.0%
! GGGCATGTGTCAAGTTGCCA+TGG - chr4_4:79198377-79198396 None:intergenic 55.0%
! TCTTGTGCTGGCGCTCCATA+TGG - chr4_4:79199428-79199447 None:intergenic 55.0%
AGCGCCAGCACAAGACTACA+GGG + chr4_4:79199433-79199452 Msa0706230:CDS 55.0%
!! GGTGGTTTTACTTGTGGGGC+TGG + chr4_4:79199463-79199482 Msa0706230:CDS 55.0%
ACTTGTGGGGCTGGGAATAG+GGG + chr4_4:79199472-79199491 Msa0706230:CDS 55.0%
CTGCACCAGCGTTTACGAAC+AGG + chr4_4:79199748-79199767 Msa0706230:CDS 55.0%
CATCCACACCGTGCTTTGCA+TGG - chr4_4:79199817-79199836 None:intergenic 55.0%
CACGGTGTGGATGTTGTGTC+CGG + chr4_4:79199824-79199843 Msa0706230:CDS 55.0%
CGATAGCTGACGAAGCTCGT+GGG - chr4_4:79200221-79200240 None:intergenic 55.0%
ACGATAGCTGACGAAGCTCG+TGG - chr4_4:79200222-79200241 None:intergenic 55.0%
CGAGCTTCGTCAGCTATCGT+TGG + chr4_4:79200222-79200241 Msa0706230:CDS 55.0%
GAGTCATCTTGGTGGAGGAC+TGG - chr4_4:79200346-79200365 None:intergenic 55.0%
GGAGAGGACCAAGTCTGCAG+TGG + chr4_4:79194912-79194931 Msa0706230:CDS 60.0%
GCAGTGGCTCATGCTCTCAC+TGG + chr4_4:79194928-79194947 Msa0706230:CDS 60.0%
GCTCGGCAGAGAGGGATTCA+AGG + chr4_4:79195350-79195369 Msa0706230:CDS 60.0%
CGGCAGAGAGGGATTCAAGG+AGG + chr4_4:79195353-79195372 Msa0706230:CDS 60.0%
! GTTTGTTGGCAGTGGCGCTC+AGG - chr4_4:79195780-79195799 None:intergenic 60.0%
!! GATGGGGCACTGTGTGTGCA+TGG + chr4_4:79196242-79196261 Msa0706230:CDS 60.0%
GCTTGCCAGCCAGCCATCAA+TGG + chr4_4:79197821-79197840 Msa0706230:CDS 60.0%
GAGCGCCAGCACAAGACTAC+AGG + chr4_4:79199432-79199451 Msa0706230:CDS 60.0%
CTGACGAAGCTCGTGGGTCA+GGG - chr4_4:79200215-79200234 None:intergenic 60.0%
TCATCCCAGGAGAAGGGACC+TGG + chr4_4:79200639-79200658 Msa0706230:three_prime_UTR 60.0%
CCTTCCAGGTCCCTTCTCCT+GGG - chr4_4:79200646-79200665 None:intergenic 60.0%
TCCTTCCAGGTCCCTTCTCC+TGG - chr4_4:79200647-79200666 None:intergenic 60.0%
AGCTCGTGGGTCAGGGTGGA+TGG - chr4_4:79200208-79200227 None:intergenic 65.0%
ACGAAGCTCGTGGGTCAGGG+TGG - chr4_4:79200212-79200231 None:intergenic 65.0%
GCTGACGAAGCTCGTGGGTC+AGG - chr4_4:79200216-79200235 None:intergenic 65.0%
CCCAGGAGAAGGGACCTGGA+AGG + chr4_4:79200643-79200662 Msa0706230:three_prime_UTR 65.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 79194445 79200824 79194445 ID=Msa0706230;Name=Msa0706230
chr4_4 mRNA 79194445 79200824 79194445 ID=Msa0706230-mRNA-1;Parent=Msa0706230;Name=Msa0706230-mRNA-1;_AED=0.07;_eAED=0.07;_QI=99|1|1|1|1|1|12|527|898
chr4_4 exon 79194445 79195072 79194445 ID=Msa0706230-mRNA-1:exon:25445;Parent=Msa0706230-mRNA-1
chr4_4 exon 79195300 79195462 79195300 ID=Msa0706230-mRNA-1:exon:25446;Parent=Msa0706230-mRNA-1
chr4_4 exon 79195548 79195596 79195548 ID=Msa0706230-mRNA-1:exon:25447;Parent=Msa0706230-mRNA-1
chr4_4 exon 79195769 79195882 79195769 ID=Msa0706230-mRNA-1:exon:25448;Parent=Msa0706230-mRNA-1
chr4_4 exon 79195982 79196404 79195982 ID=Msa0706230-mRNA-1:exon:25449;Parent=Msa0706230-mRNA-1
chr4_4 exon 79196580 79196963 79196580 ID=Msa0706230-mRNA-1:exon:25450;Parent=Msa0706230-mRNA-1
chr4_4 exon 79197058 79197153 79197058 ID=Msa0706230-mRNA-1:exon:25451;Parent=Msa0706230-mRNA-1
chr4_4 exon 79197293 79197408 79197293 ID=Msa0706230-mRNA-1:exon:25452;Parent=Msa0706230-mRNA-1
chr4_4 exon 79197554 79197656 79197554 ID=Msa0706230-mRNA-1:exon:25453;Parent=Msa0706230-mRNA-1
chr4_4 exon 79197821 79197894 79197821 ID=Msa0706230-mRNA-1:exon:25454;Parent=Msa0706230-mRNA-1
chr4_4 exon 79199397 79199932 79199397 ID=Msa0706230-mRNA-1:exon:25455;Parent=Msa0706230-mRNA-1
chr4_4 exon 79200188 79200824 79200188 ID=Msa0706230-mRNA-1:exon:25456;Parent=Msa0706230-mRNA-1
chr4_4 five_prime_UTR 79194445 79194543 79194445 ID=Msa0706230-mRNA-1:five_prime_utr;Parent=Msa0706230-mRNA-1
chr4_4 CDS 79194544 79195072 79194544 ID=Msa0706230-mRNA-1:cds;Parent=Msa0706230-mRNA-1
chr4_4 CDS 79195300 79195462 79195300 ID=Msa0706230-mRNA-1:cds;Parent=Msa0706230-mRNA-1
chr4_4 CDS 79195548 79195596 79195548 ID=Msa0706230-mRNA-1:cds;Parent=Msa0706230-mRNA-1
chr4_4 CDS 79195769 79195882 79195769 ID=Msa0706230-mRNA-1:cds;Parent=Msa0706230-mRNA-1
chr4_4 CDS 79195982 79196404 79195982 ID=Msa0706230-mRNA-1:cds;Parent=Msa0706230-mRNA-1
chr4_4 CDS 79196580 79196963 79196580 ID=Msa0706230-mRNA-1:cds;Parent=Msa0706230-mRNA-1
chr4_4 CDS 79197058 79197153 79197058 ID=Msa0706230-mRNA-1:cds;Parent=Msa0706230-mRNA-1
chr4_4 CDS 79197293 79197408 79197293 ID=Msa0706230-mRNA-1:cds;Parent=Msa0706230-mRNA-1
chr4_4 CDS 79197554 79197656 79197554 ID=Msa0706230-mRNA-1:cds;Parent=Msa0706230-mRNA-1
chr4_4 CDS 79197821 79197894 79197821 ID=Msa0706230-mRNA-1:cds;Parent=Msa0706230-mRNA-1
chr4_4 CDS 79199397 79199932 79199397 ID=Msa0706230-mRNA-1:cds;Parent=Msa0706230-mRNA-1
chr4_4 CDS 79200188 79200297 79200188 ID=Msa0706230-mRNA-1:cds;Parent=Msa0706230-mRNA-1
chr4_4 three_prime_UTR 79200298 79200824 79200298 ID=Msa0706230-mRNA-1:three_prime_utr;Parent=Msa0706230-mRNA-1
Gene Sequence

>Msa0706230

ATGGGAGGATCTTCTGCAGATCTTCATCATCATGAATCAAATATAGAACTCATTGCCCCTGAGAACAGCACAAAGTTAAGCACTGCTGAGTCCAAAGCTGTCACAGATGTTGACCATAACAAAGAAGAAGATGCAGACTATGTTGAGGTGACCATGGACATTCAAGGTGACTCTGTTGCCTTACACAGTGTGAAAACTGTAACAGAAAGTGACATGGGAGAAGGGGAACATGAGAAACAGTCTTTGACTGGGAACAAGTTGGAGAAGAAGAAATCATTTGGTGCTTCAGTGGTTCAAAATGCTACTATTCGTATAAAGCAGCTGAAGCGTTTGGCATCGTTTTCGAAACCAGAACCAGCAAAACGATTGGAGAGGACCAAGTCTGCAGTGGCTCATGCTCTCACTGGACTCAAGTTTATCAGCAAGACTGATGTTGGTGCAGGATGGTCTGAAGTTGAGAAAGTGTTTGATAAGCTTACCGTGACAACTGACGGTTATCTTCCTCGCACTCTCTTTGCTAAATGCATAGGATTGAATGAAGAGTCAAAGGCCTATGCTGAGATGCTTTTTGATACTCTTGCTCGGCAGAGAGGGATTCAAGGAGGTTCGATCAACAAGATCCAGTTTAGGGAGTTCTGGGACTGTATTTCTGACCAAAGCTTTGATACTAGGCTCAAAATATTCTTTGACATGGTTGACAAAGATGCAGATGGAAGAATCACGGAGGAAGAGATAAAAGATATTATATGCCTGAGCGCCACTGCCAACAAACTGTCAAACATCCAGAAACAAGCAGAGGAATATGCGGCTTTGATCATGGAAGAACTAGACCCGGATGACACAGGATATATCTTGATAGGCAATCTCGAGACTCTCTTATTACATGGACCAGAAGAAACTACAAGGGGAGAAAGTAAGTACCTGAGCCAAATGCTAAGCCAAAAGCTTAGGCCTACATTTGAGGGAAATCCTATTAAGAGGTGGTGTAGAGATACCAAGTACTTCTTCCAGGATAACTGGCGAAGATCCTGGGTATTTGCTCTGTGGATTGGTGCCATGTTAGGCCTATTTGCCTTTAAATTTGTGCAATATAGGAGAAGATCTGCATATGAAGTGATGGGGCACTGTGTGTGCATGGCAAAAGGGGCTGCTGAAACACTTAAATTGAACATGGCCATTATCTTATTGCCTGTTTGCCGAAACACCATCACTTGGCTCAGGAATAGGACCAAGCTAGGTGCTTTTGTTCCTTTTGATGATGGCCTCAATTTTCACAAGATGATAGCTCTGGCAATATCAATTGGTGTTGGTATACATGCTATTTATCATCTTGTTTGTGATTTTCCTCGCATTCTTCATGCAAGCAATGAAAAGTACAAGCTGATTGAGCCTTTTTTCGGAGAGAAACCATCAAACTACTGGCATTTTGTCAAATCATGGGAAGGGGTAACAGGAATTCTAATGGTTGTGCTAATGGCAATAGCCTTTACACTGGCCAATACTAGGTTCAGGAGGAATCGCACCAAACTACCTAAACCCTTCAACAAACTCACAGGTTTCAATGCCTTTTGGTATTCTCATCACCTCTTCATCATTGTGTATGCCCTGTTGATTATCCATGGAACCAAACTTTACTTGACTAAGGAATGGAACCATAAAACAACTTGGATGTATCTGGCTATTCCCATCACCATTTATGCATTGGAGAGACTTATTAGAGCACTTAGATCAAGCATCAAGTCTGTGCGAATATTGAAGGTGGCTGTTTATCCTGGAAATGTGTTGGCAATTAATATGTCAAAGCCTCAAGGATTTAGCTATAAGAGTGGACAGTACATGCTTGTCAATTGTGCTGCTGTTTCTCCACTTGAATGGCATCCATTTTCCATAACTTCTGCCCCTAATGATGATTACCTTAGTGTTCATATTAAAATACTTGGTGATTGGACTAGAAGTCTGAAAACCAAATTCTCACAGGCTTGCCAGCCAGCCATCAATGGACAGAGTGGACTTCTAAGAGCTGAATGCTTGAAAGGAGATAACAGCCCAAGTACTTTCCCTAAAGTTTTGATCGATGGTCCATATGGAGCGCCAGCACAAGACTACAGGGAGTATGAGGTGGTTTTACTTGTGGGGCTGGGAATAGGGGCTACCCCAATGATAAGTATACTAAAGGACATGGTCAATAATTTCAAGGCCATGGAAAAGGAAGATGGGTTTGCAATGGAAGAAGGGTCACCAATGACAACCAACCAGAAAGACTCTAGGTTCAGTGACTTCAAGACCAGGAGGGCATACTTCTATTGGGTGACAAGAGAGCAGGGTTCCTTTGATTGGTTTAAAGGGGTGATGAATGATGTAGCTGAGGAGGATAGAAGGGGATTGATTGAGCTACACAGCTACTGCACCAGCGTTTACGAACAGGGTGATGCTCGCTCTGCTCTTATCGCTATGGTGCAGTCTATAAACCATGCAAAGCACGGTGTGGATGTTGTGTCCGGCACTCGTGTCATGTCTCATTTTGCTAAACCCAATTGGCGAACTGTCTACAAACGCATTGCACTTAATCATCCGGAAGCACAAGTTGGGGTATTTTACTGCGGGCCATCCACCCTGACCCACGAGCTTCGTCAGCTATCGTTGGATTTCTCTCACAACACATCAACCAAATTCGACTTTCATAAAGAAAATTTCTGA
Protein sequence

>Msa0706230

MGGSSADLHHHESNIELIAPENSTKLSTAESKAVTDVDHNKEEDADYVEVTMDIQGDSVALHSVKTVTESDMGEGEHEKQSLTGNKLEKKKSFGASVVQNATIRIKQLKRLASFSKPEPAKRLERTKSAVAHALTGLKFISKTDVGAGWSEVEKVFDKLTVTTDGYLPRTLFAKCIGLNEESKAYAEMLFDTLARQRGIQGGSINKIQFREFWDCISDQSFDTRLKIFFDMVDKDADGRITEEEIKDIICLSATANKLSNIQKQAEEYAALIMEELDPDDTGYILIGNLETLLLHGPEETTRGESKYLSQMLSQKLRPTFEGNPIKRWCRDTKYFFQDNWRRSWVFALWIGAMLGLFAFKFVQYRRRSAYEVMGHCVCMAKGAAETLKLNMAIILLPVCRNTITWLRNRTKLGAFVPFDDGLNFHKMIALAISIGVGIHAIYHLVCDFPRILHASNEKYKLIEPFFGEKPSNYWHFVKSWEGVTGILMVVLMAIAFTLANTRFRRNRTKLPKPFNKLTGFNAFWYSHHLFIIVYALLIIHGTKLYLTKEWNHKTTWMYLAIPITIYALERLIRALRSSIKSVRILKVAVYPGNVLAINMSKPQGFSYKSGQYMLVNCAAVSPLEWHPFSITSAPNDDYLSVHIKILGDWTRSLKTKFSQACQPAINGQSGLLRAECLKGDNSPSTFPKVLIDGPYGAPAQDYREYEVVLLVGLGIGATPMISILKDMVNNFKAMEKEDGFAMEEGSPMTTNQKDSRFSDFKTRRAYFYWVTREQGSFDWFKGVMNDVAEEDRRGLIELHSYCTSVYEQGDARSALIAMVQSINHAKHGVDVVSGTRVMSHFAKPNWRTVYKRIALNHPEAQVGVFYCGPSTLTHELRQLSLDFSHNTSTKFDFHKENF*