AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0490110

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0490110 MtrunA17_Chr3g0080741 94.620 948 51 0 1 948 1 948 0.0 1850
Msa0490110 MtrunA17_Chr3g0094301 79.347 949 192 3 1 948 1 946 0.0 1529
Msa0490110 MtrunA17_Chr7g0229761 79.347 949 192 3 1 948 1 946 0.0 1529
Msa0490110 MtrunA17_Chr3g0080791 79.241 949 192 4 1 948 1 945 0.0 1495
Msa0490110 MtrunA17_Chr3g0080751 78.858 946 195 4 1 944 1 943 0.0 1495
Msa0490110 MtrunA17_Chr3g0080631 77.977 949 160 4 1 948 1 901 0.0 1494
Msa0490110 MtrunA17_Chr3g0080731 77.871 949 206 3 1 948 1 946 0.0 1494
Msa0490110 MtrunA17_Chr3g0080601 76.769 947 217 2 1 947 1 944 0.0 1493
Msa0490110 MtrunA17_Chr3g0080771 76.632 950 215 4 1 948 1 945 0.0 1451
Msa0490110 MtrunA17_Chr3g0080651 68.776 948 204 8 1 947 4 860 0.0 1229
Msa0490110 MtrunA17_Chr3g0080721 76.574 683 158 1 266 948 2 682 0.0 1075
Msa0490110 MtrunA17_Chr3g0081391 56.691 949 401 5 1 945 1 943 0.0 1065
Msa0490110 MtrunA17_Chr3g0081191 55.638 949 409 5 1 946 1 940 0.0 1045
Msa0490110 MtrunA17_Chr3g0081211 55.380 948 414 5 1 945 1 942 0.0 1019
Msa0490110 MtrunA17_Chr3g0081341 55.285 946 410 6 1 941 66 1003 0.0 1014
Msa0490110 MtrunA17_Chr3g0081361 55.132 945 402 6 1 932 1 936 0.0 1007
Msa0490110 MtrunA17_Chr3g0081371 55.183 955 404 8 1 941 1 945 0.0 998
Msa0490110 MtrunA17_Chr1g0151481 53.361 952 420 12 1 941 1 939 0.0 962
Msa0490110 MtrunA17_Chr3g0081181 53.340 943 418 8 1 941 1 923 0.0 927
Msa0490110 MtrunA17_Chr3g0084351 79.751 563 105 3 69 631 1 554 0.0 921
Msa0490110 MtrunA17_Chr3g0101321 50.267 935 435 10 1 930 1 910 0.0 882
Msa0490110 MtrunA17_Chr3g0112511 48.556 935 446 13 1 930 1 905 0.0 808
Msa0490110 MtrunA17_Chr3g0100831 47.103 932 461 16 1 926 1 906 0.0 801
Msa0490110 MtrunA17_Chr3g0101331 47.624 926 439 15 1 900 1 906 0.0 786
Msa0490110 MtrunA17_Chr1g0189351 46.983 928 441 20 1 902 1 903 0.0 766
Msa0490110 MtrunA17_Chr3g0100961 45.318 929 479 15 1 925 1 904 0.0 764
Msa0490110 MtrunA17_Chr3g0101011 44.963 943 491 16 1 925 1 933 0.0 740
Msa0490110 MtrunA17_Chr3g0100801 44.603 843 390 10 5 843 2 771 0.0 670
Msa0490110 MtrunA17_Chr3g0100971 47.292 757 369 10 1 750 1 734 0.0 669
Msa0490110 MtrunA17_Chr3g0101201 42.291 934 492 16 8 925 18 920 0.0 661
Msa0490110 MtrunA17_Chr3g0101271 41.921 916 484 12 23 927 10 888 0.0 661
Msa0490110 MtrunA17_Chr3g0101241 41.921 916 484 12 23 927 10 888 0.0 660
Msa0490110 MtrunA17_Chr3g0101231 42.241 928 493 15 17 925 25 928 0.0 646
Msa0490110 MtrunA17_Chr3g0100851 43.086 810 428 7 112 919 1 779 0.0 644
Msa0490110 MtrunA17_Chr3g0100761 45.430 755 346 8 1 750 1 694 0.0 636
Msa0490110 MtrunA17_Chr3g0101221 41.183 947 514 18 2 929 4 926 0.0 627
Msa0490110 MtrunA17_Chr3g0101181 41.493 911 488 14 19 907 29 916 0.0 624
Msa0490110 MtrunA17_Chr5g0410001 39.583 960 539 22 1 948 1 931 0.0 614
Msa0490110 MtrunA17_Chr3g0101251 40.415 965 489 20 1 945 1 899 0.0 604
Msa0490110 MtrunA17_Chr5g0410031 38.525 963 550 19 1 948 1 936 0.0 597
Msa0490110 MtrunA17_Chr5g0410021 37.673 937 537 15 1 923 1 904 0.0 591
Msa0490110 MtrunA17_Chr5g0409991 37.759 964 555 17 1 948 1 935 0.0 586
Msa0490110 MtrunA17_Chr5g0409971 37.290 952 557 18 1 940 1 924 0.0 569
Msa0490110 MtrunA17_Chr3g0100681 45.546 595 309 5 192 784 1 582 3.37e-164 493
Msa0490110 MtrunA17_Chr3g0100731 41.826 679 378 6 250 925 1 665 9.47e-162 490
Msa0490110 MtrunA17_Chr3g0101391 42.615 589 314 7 323 899 1 577 1.76e-152 462
Msa0490110 MtrunA17_Chr3g0100781 51.309 382 173 7 1 379 1 372 3.31e-119 368
Msa0490110 MtrunA17_Chr3g0084361 67.803 264 85 0 685 948 1 264 1.77e-114 352
Msa0490110 MtrunA17_Chr1g0189271 53.231 325 150 2 168 491 1 324 9.86e-114 352
Msa0490110 MtrunA17_Chr3g0080701 81.735 219 39 1 1 218 1 219 9.29e-110 338
Msa0490110 MtrunA17_Chr2g0299001 29.363 957 602 26 1 921 1 919 1.10e-109 360
Msa0490110 MtrunA17_Chr5g0404741 29.865 961 580 25 1 923 1 905 3.44e-107 353
Msa0490110 MtrunA17_Chr3g0101211 44.310 413 220 4 207 619 1 403 1.46e-103 328
Msa0490110 MtrunA17_Chr7g0219851 28.659 984 589 29 1 923 3 934 9.57e-102 339
Msa0490110 MtrunA17_Chr4g0037421 29.218 972 550 30 1 893 38 950 1.30e-97 329
Msa0490110 MtrunA17_Chr3g0100701 57.439 289 113 7 1 286 1 282 2.19e-93 312
Msa0490110 MtrunA17_Chr3g0100701 40.169 473 259 11 458 926 284 736 2.54e-90 303
Msa0490110 MtrunA17_Chr5g0444301 42.418 455 242 6 448 894 1 443 1.70e-91 298
Msa0490110 MtrunA17_Chr3g0101421 50.515 291 136 4 1 288 1 286 5.99e-89 285
Msa0490110 MtrunA17_Chr3g0101361 37.149 498 264 8 458 925 290 768 5.87e-83 284
Msa0490110 MtrunA17_Chr3g0101361 38.832 291 169 6 16 304 26 309 7.04e-50 189
Msa0490110 MtrunA17_Chr3g0100791 36.726 452 270 5 470 919 1 438 6.88e-82 272
Msa0490110 MtrunA17_Chr3g0081841 52.060 267 111 4 168 434 1 250 1.22e-81 273
Msa0490110 MtrunA17_Chr3g0081841 52.288 153 72 1 444 595 189 341 1.83e-37 147
Msa0490110 MtrunA17_Chr3g0081841 56.190 105 46 0 722 826 383 487 2.27e-31 129
Msa0490110 MtrunA17_Chr1g0197241 26.396 913 582 25 26 899 672 1533 2.23e-74 268
Msa0490110 MtrunA17_Chr1g0189281 39.896 386 208 7 518 892 2 374 2.76e-72 243
Msa0490110 MtrunA17_Chr3g0081201 50.439 228 112 1 720 946 2 229 4.11e-71 235
Msa0490110 MtrunA17_Chr1g0160871 74.194 155 36 1 640 794 1 151 4.61e-70 229
Msa0490110 MtrunA17_Chr1g0149071 36.000 425 179 7 237 640 1 353 7.07e-68 234
Msa0490110 MtrunA17_Chr1g0149071 42.857 161 87 2 689 845 293 452 5.17e-29 121
Msa0490110 MtrunA17_Chr1g0197201 26.632 950 576 30 9 902 464 1348 6.99e-67 244
Msa0490110 MtrunA17_Chr5g0414311 25.753 963 587 35 1 896 1 902 8.67e-62 228
Msa0490110 MtrunA17_Chr3g0100721 54.825 228 90 6 1 225 1 218 9.01e-62 209
Msa0490110 MtrunA17_Chr6g0467961 26.813 910 573 35 1 881 1 846 1.38e-60 222
Msa0490110 MtrunA17_Chr6g0468451 26.936 917 568 29 1 881 1 851 2.52e-60 224
Msa0490110 MtrunA17_Chr3g0089911 28.148 675 385 20 28 663 38 651 3.39e-60 218
Msa0490110 MtrunA17_Chr3g0086161 25.938 906 562 31 38 900 42 881 4.24e-60 223
Msa0490110 MtrunA17_Chr3g0086221 27.552 911 541 32 38 900 42 881 5.15e-60 223
Msa0490110 MtrunA17_Chr5g0414181 28.108 925 557 40 1 882 1 860 5.79e-60 222
Msa0490110 MtrunA17_Chr3g0082811 28.226 744 426 25 90 798 101 771 1.99e-59 218
Msa0490110 MtrunA17_Chr6g0470081 26.133 949 597 34 1 910 1 884 3.61e-59 220
Msa0490110 MtrunA17_Chr6g0470011 26.380 906 562 33 16 882 16 855 4.52e-59 220
Msa0490110 MtrunA17_Chr6g0468151 26.119 938 585 36 1 898 1 870 7.60e-59 219
Msa0490110 MtrunA17_Chr1g0189551 25.212 944 583 27 1 925 29 868 8.39e-59 217
Msa0490110 MtrunA17_Chr7g0248221 25.521 960 572 33 1 928 1 849 1.06e-58 216
Msa0490110 MtrunA17_Chr5g0415471 25.624 761 474 25 1 730 1 700 1.59e-58 218
Msa0490110 MtrunA17_Chr3g0089991 28.550 669 385 21 33 663 43 656 2.74e-58 218
Msa0490110 MtrunA17_Chr5g0430291 26.163 967 578 34 1 913 1 885 2.88e-58 217
Msa0490110 MtrunA17_Chr6g0468021 26.986 919 573 31 1 887 1 853 3.02e-58 218
Msa0490110 MtrunA17_Chr3g0101341 43.321 277 135 8 23 286 1 268 3.55e-58 201
Msa0490110 MtrunA17_Chr3g0082871 27.755 735 426 29 34 735 33 695 3.56e-58 213
Msa0490110 MtrunA17_Chr3g0089871 25.797 690 415 18 28 666 38 681 4.67e-58 217
Msa0490110 MtrunA17_Chr3g0089601 27.286 711 439 24 34 721 42 697 5.28e-58 215
Msa0490110 MtrunA17_Chr3g0123111 25.806 930 565 31 1 882 1 853 5.51e-58 217
Msa0490110 MtrunA17_Chr1g0189321 46.444 239 120 3 411 643 1 237 6.03e-58 199
Msa0490110 MtrunA17_Chr3g0090371 25.844 948 562 33 41 908 51 937 6.85e-58 217
Msa0490110 MtrunA17_Chr3g0086621 27.867 811 492 31 38 817 42 790 8.60e-58 216
Msa0490110 MtrunA17_Chr3g0086181 27.827 902 547 35 38 900 42 878 1.40e-57 214
Msa0490110 MtrunA17_Chr3g0084031 26.257 895 554 30 62 909 69 904 2.36e-57 215
Msa0490110 MtrunA17_Chr2g0309721 27.273 836 479 36 34 817 44 802 3.16e-57 215
Msa0490110 MtrunA17_Chr3g0089501 26.928 713 439 24 34 721 42 697 4.24e-57 212
Msa0490110 MtrunA17_Chr3g0091081 27.646 803 465 32 31 787 41 773 5.57e-57 214
Msa0490110 MtrunA17_Chr3g0087581 27.952 923 543 37 38 913 42 889 9.63e-57 213
Msa0490110 MtrunA17_Chr5g0431051 26.492 955 583 37 1 911 1 880 1.19e-56 212
Msa0490110 MtrunA17_Chr3g0092261 25.763 819 492 30 28 799 83 832 1.90e-56 213
Msa0490110 MtrunA17_Chr7g0221481 27.418 879 511 34 1 821 1 810 2.22e-56 209
Msa0490110 MtrunA17_Chr3g0085451 28.727 825 493 37 147 921 116 895 3.53e-56 211
Msa0490110 MtrunA17_Chr5g0430621 25.405 925 581 31 1 880 1 861 4.34e-56 210
Msa0490110 MtrunA17_Chr3g0090141 27.763 778 477 29 41 787 51 774 4.55e-56 211
Msa0490110 MtrunA17_Chr3g0090651 27.170 795 459 32 42 787 52 775 8.71e-56 209
Msa0490110 MtrunA17_Chr6g0468121 26.804 679 429 19 1 664 1 626 1.04e-55 209
Msa0490110 MtrunA17_Chr8g0352831 27.220 687 423 22 10 663 27 669 1.06e-55 210
Msa0490110 MtrunA17_Chr1g0169901 28.610 734 420 27 6 707 17 678 1.50e-55 209
Msa0490110 MtrunA17_Chr3g0087841 27.003 774 488 27 41 787 51 774 1.87e-55 209
Msa0490110 MtrunA17_Chr3g0092241 28.571 728 410 28 34 722 44 700 2.07e-55 209
Msa0490110 MtrunA17_Chr6g0468101 26.292 677 395 18 1 664 1 586 4.06e-55 207
Msa0490110 MtrunA17_Chr1g0164611 29.287 659 383 23 42 663 52 664 4.24e-55 207
Msa0490110 MtrunA17_Chr4g0025391 27.176 655 416 19 28 663 38 650 6.34e-55 207
Msa0490110 MtrunA17_Chr3g0090691 28.615 657 379 25 42 663 52 653 6.94e-55 207
Msa0490110 MtrunA17_Chr6g0467911 26.449 828 517 29 1 798 1 766 9.01e-55 204
Msa0490110 MtrunA17_Chr5g0430641 26.096 981 552 39 1 911 1 878 1.01e-54 206
Msa0490110 MtrunA17_Chr3g0091061 27.078 794 461 31 42 787 52 775 1.37e-54 206
Msa0490110 MtrunA17_Chr5g0430141 26.543 972 565 38 1 911 1 884 2.12e-54 205
Msa0490110 MtrunA17_Chr3g0089421 26.113 831 500 28 34 817 44 807 2.90e-54 206
Msa0490110 MtrunA17_Chr1g0155321 25.882 935 556 37 1 882 1 851 2.92e-54 204
Msa0490110 MtrunA17_Chr3g0082881 29.173 617 362 21 163 751 146 715 4.40e-54 203
Msa0490110 MtrunA17_Chr3g0086151 28.358 737 444 28 38 751 42 717 5.09e-54 203
Msa0490110 MtrunA17_Chr3g0089651 27.042 710 448 21 33 721 43 703 6.02e-54 204
Msa0490110 MtrunA17_Chr3g0089961 27.248 745 414 29 34 728 44 710 6.85e-54 203
Msa0490110 MtrunA17_Chr3g0090401 27.596 703 410 25 41 710 262 898 7.43e-54 204
Msa0490110 MtrunA17_Chr3g0101401 55.866 179 71 5 96 271 12 185 8.36e-54 185
Msa0490110 MtrunA17_Chr3g0089591 27.031 751 468 26 36 749 42 749 9.58e-54 204
Msa0490110 MtrunA17_Chr3g0089541 27.795 662 398 20 33 663 43 655 9.73e-54 204
Msa0490110 MtrunA17_Chr3g0087541 27.617 898 545 37 47 890 47 893 1.23e-53 203
Msa0490110 MtrunA17_Chr3g0082391 29.287 659 391 23 34 663 43 655 1.36e-53 201
Msa0490110 MtrunA17_Chr3g0089781 27.108 830 491 30 34 817 44 805 1.55e-53 202
Msa0490110 MtrunA17_Chr3g0085651 26.058 898 559 34 38 891 42 878 2.11e-53 203
Msa0490110 MtrunA17_Chr3g0087701 29.055 709 425 27 145 817 128 794 3.53e-53 202
Msa0490110 MtrunA17_Chr3g0089211 26.611 838 473 33 40 817 97 852 3.59e-53 202
Msa0490110 MtrunA17_Chr6g0470021 27.719 754 473 25 156 877 28 741 3.87e-53 200
Msa0490110 MtrunA17_Chr3g0090431 28.397 655 392 24 169 787 33 646 4.86e-53 201
Msa0490110 MtrunA17_Chr3g0089811 27.285 744 397 30 34 721 44 699 5.49e-53 201
Msa0490110 MtrunA17_Chr8g0352861 24.838 926 602 32 10 891 27 902 6.02e-53 201
Msa0490110 MtrunA17_Chr7g0244231 25.000 972 570 34 1 911 1 874 7.77e-53 200
Msa0490110 MtrunA17_Chr6g0468271 27.232 672 431 22 1 664 1 622 8.29e-53 201
Msa0490110 MtrunA17_Chr3g0089471 27.392 763 453 28 31 749 41 746 9.39e-53 201
Msa0490110 MtrunA17_Chr4g0051651 26.778 661 409 22 22 641 44 670 9.76e-53 196
Msa0490110 MtrunA17_Chr8g0355411 25.428 818 523 23 1 793 7 762 9.89e-53 199
Msa0490110 MtrunA17_Chr5g0430511 26.425 965 574 37 1 911 1 883 1.21e-52 200
Msa0490110 MtrunA17_Chr7g0248531 29.828 523 323 15 169 672 151 648 1.40e-52 199
Msa0490110 MtrunA17_Chr3g0089761 26.923 780 461 29 53 787 58 773 1.81e-52 200
Msa0490110 MtrunA17_Chr8g0348931 27.786 655 410 19 33 663 43 658 1.92e-52 200
Msa0490110 MtrunA17_Chr5g0430441 26.316 969 565 37 1 911 1 878 1.96e-52 199
Msa0490110 MtrunA17_Chr3g0085561 25.638 823 495 25 47 824 47 797 1.97e-52 199
Msa0490110 MtrunA17_Chr3g0085931 25.182 961 613 32 1 918 1 898 2.33e-52 199
Msa0490110 MtrunA17_Chr3g0085331 25.973 874 545 32 1 824 1 822 3.20e-52 199
Msa0490110 MtrunA17_Chr5g0430581 25.440 967 569 33 1 911 1 871 3.57e-52 198
Msa0490110 MtrunA17_Chr2g0282991 27.630 713 440 24 19 699 26 694 3.73e-52 199
Msa0490110 MtrunA17_Chr5g0414201 25.630 913 531 34 1 850 1 828 5.06e-52 197
Msa0490110 MtrunA17_Chr7g0257541 24.214 954 578 32 10 925 16 862 5.50e-52 197
Msa0490110 MtrunA17_Chr2g0316291 26.170 833 523 30 26 817 30 811 8.09e-52 197
Msa0490110 MtrunA17_Chr1g0164391 28.790 653 394 23 38 663 47 655 8.47e-52 197
Msa0490110 MtrunA17_Chr3g0089251 26.516 841 470 34 40 817 79 834 8.55e-52 198
Msa0490110 MtrunA17_Chr5g0446611 27.712 848 501 37 19 817 26 810 1.19e-51 196
Msa0490110 MtrunA17_Chr5g0429961 25.826 968 558 37 1 906 1 870 1.35e-51 196
Msa0490110 MtrunA17_Chr4g0027251 25.615 976 570 33 1 911 1 885 1.40e-51 196
Msa0490110 MtrunA17_Chr4g0010201 29.104 670 387 26 129 756 116 739 1.77e-51 196
Msa0490110 MtrunA17_Chr5g0433771 23.909 962 588 30 1 926 1 854 1.91e-51 195
Msa0490110 MtrunA17_Chr3g0082791 26.932 828 488 29 38 817 49 807 2.08e-51 196
Msa0490110 MtrunA17_Chr3g0082101 29.082 643 353 24 42 663 52 612 2.47e-51 195
Msa0490110 MtrunA17_Chr4g0009781 29.580 666 392 24 129 757 116 741 2.79e-51 196
Msa0490110 MtrunA17_Chr3g0085471 24.828 870 545 32 1 824 1 807 3.49e-51 196
Msa0490110 MtrunA17_Chr3g0082131 27.149 663 390 25 42 663 50 660 4.11e-51 196
Msa0490110 MtrunA17_Chr3g0085501 26.484 876 535 35 1 824 1 819 4.50e-51 196
Msa0490110 MtrunA17_Chr3g0113481 28.049 574 349 16 172 721 149 682 5.39e-51 192
Msa0490110 MtrunA17_Chr1g0164631 27.802 687 383 25 42 666 51 686 7.86e-51 194
Msa0490110 MtrunA17_Chr5g0430721 27.220 687 421 23 1 664 42 672 8.02e-51 194
Msa0490110 MtrunA17_Chr8g0344071 27.051 780 477 22 174 923 444 1161 8.27e-51 194
Msa0490110 MtrunA17_Chr5g0429951 26.118 693 423 22 1 664 1 633 1.65e-50 193
Msa0490110 MtrunA17_Chr1g0155991 25.784 861 516 31 1 817 1 782 1.71e-50 193
Msa0490110 MtrunA17_Chr5g0430951 25.914 930 557 34 1 877 1 851 2.86e-50 191
Msa0490110 MtrunA17_Chr3g0084051 26.121 892 546 31 62 905 67 893 3.59e-50 192
Msa0490110 MtrunA17_Chr3g0082311 28.078 666 381 25 38 663 47 654 6.43e-50 192
Msa0490110 MtrunA17_Chr6g0471941 27.031 677 422 23 20 673 24 651 6.49e-50 191
Msa0490110 MtrunA17_Chr3g0100911 41.079 241 127 3 634 871 2 230 1.20e-49 175
Msa0490110 MtrunA17_Chr5g0415511 26.459 737 450 27 1 707 1 675 1.87e-49 187
Msa0490110 MtrunA17_Chr3g0082891 27.981 629 392 22 163 770 146 734 6.64e-49 187
Msa0490110 MtrunA17_Chr3g0096971 48.571 175 90 0 269 443 1 175 7.19e-49 171
Msa0490110 MtrunA17_Chr3g0082351 27.935 673 379 25 34 663 43 652 7.54e-49 188
Msa0490110 MtrunA17_Chr5g0414231 27.495 531 331 16 1 515 1 493 7.85e-49 181
Msa0490110 MtrunA17_Chr6g0475491 27.096 668 410 24 24 663 28 646 1.13e-48 186
Msa0490110 MtrunA17_Chr8g0338621 26.870 655 418 22 26 663 30 640 1.25e-48 184
Msa0490110 MtrunA17_Chr3g0086741 26.783 687 410 24 149 787 151 792 1.69e-48 186
Msa0490110 MtrunA17_Chr8g0338261 25.851 646 429 19 26 658 30 638 2.17e-48 186
Msa0490110 MtrunA17_Chr6g0468341 27.672 524 323 14 1 508 1 484 2.43e-48 186
Msa0490110 MtrunA17_Chr3g0084971 26.642 822 500 29 34 817 44 800 6.47e-48 186
Msa0490110 MtrunA17_Chr4g0010261 29.128 642 366 24 129 729 116 709 1.02e-47 184
Msa0490110 MtrunA17_Chr3g0084081 28.403 764 479 26 169 900 164 891 1.13e-47 185
Msa0490110 MtrunA17_Chr7g0257201 26.149 696 427 23 10 663 14 664 1.15e-47 184
Msa0490110 MtrunA17_Chr3g0113791 27.544 570 357 15 172 721 149 682 2.82e-47 183
Msa0490110 MtrunA17_Chr3g0087731 28.061 727 432 27 210 896 1 676 3.22e-47 182
Msa0490110 MtrunA17_Chr3g0101351 41.057 246 133 6 16 257 28 265 4.84e-47 169
Msa0490110 MtrunA17_Chr8g0346831 26.687 667 431 20 24 673 28 653 6.28e-47 182
Msa0490110 MtrunA17_Chr3g0085801 29.479 614 345 20 167 761 163 707 1.16e-46 181
Msa0490110 MtrunA17_Chr8g0337891 26.769 650 429 21 26 664 30 643 1.48e-46 179
Msa0490110 MtrunA17_Chr8g0338391 26.308 669 424 24 26 673 30 650 2.03e-46 180
Msa0490110 MtrunA17_Chr6g0484551 25.904 664 377 25 34 663 44 626 2.46e-46 179
Msa0490110 MtrunA17_Chr2g0299151 26.207 725 430 23 62 751 67 721 3.28e-46 180
Msa0490110 MtrunA17_Chr6g0468331 25.648 694 436 21 1 663 1 645 3.59e-46 177
Msa0490110 MtrunA17_Chr3g0085131 26.000 950 580 37 1 900 1 877 4.53e-46 179
Msa0490110 MtrunA17_Chr4g0010221 28.892 623 365 25 172 756 156 738 5.10e-46 179
Msa0490110 MtrunA17_Chr2g0299091 27.491 582 357 18 178 728 142 689 7.11e-46 179
Msa0490110 MtrunA17_Chr7g0257221 24.159 981 568 32 1 925 1 861 1.87e-45 176
Msa0490110 MtrunA17_Chr4g0008461 29.112 529 299 19 194 666 152 660 4.67e-45 176
Msa0490110 MtrunA17_Chr2g0299101 27.160 567 354 18 178 716 168 703 5.55e-45 175
Msa0490110 MtrunA17_Chr3g0089931 27.800 500 301 13 28 518 38 486 1.07e-44 170
Msa0490110 MtrunA17_Chr3g0091041 28.630 489 286 18 42 520 52 487 1.34e-44 169
Msa0490110 MtrunA17_Chr1g0147141 25.773 776 465 27 8 751 35 731 1.48e-44 175
Msa0490110 MtrunA17_Chr3g0089431 28.953 449 273 13 36 470 42 458 1.89e-44 167
Msa0490110 MtrunA17_Chr3g0085751 24.498 947 589 35 10 900 7 883 3.12e-44 174
Msa0490110 MtrunA17_Chr1g0169951 26.724 696 423 25 10 664 14 663 4.03e-44 171
Msa0490110 MtrunA17_Chr1g0164581 29.240 513 299 17 185 663 154 636 5.16e-44 173
Msa0490110 MtrunA17_Chr7g0248431 26.151 543 353 17 1 525 1 513 5.47e-44 168
Msa0490110 MtrunA17_Chr3g0085521 25.332 904 559 35 47 900 43 880 5.63e-44 173
Msa0490110 MtrunA17_Chr8g0338251 26.128 643 412 20 26 655 30 622 6.45e-44 171
Msa0490110 MtrunA17_Chr3g0086091 28.395 729 444 28 210 898 1 691 7.80e-44 172
Msa0490110 MtrunA17_Chr8g0351821 27.235 481 301 14 1 472 1 441 1.40e-43 165
Msa0490110 MtrunA17_Chr4g0020501 27.159 637 370 23 38 637 3 582 1.66e-43 171
Msa0490110 MtrunA17_Chr2g0299121 27.875 513 322 14 178 663 168 659 2.34e-43 171
Msa0490110 MtrunA17_Chr3g0083751 26.879 692 394 25 33 666 44 681 3.78e-43 171
Msa0490110 MtrunA17_Chr3g0091011 26.425 772 471 30 172 900 150 867 4.86e-43 169
Msa0490110 MtrunA17_Chr3g0085111 25.365 958 583 36 1 900 1 884 1.21e-42 169
Msa0490110 MtrunA17_Chr7g0257191 24.861 720 433 24 1 665 1 667 1.46e-42 167
Msa0490110 MtrunA17_Chr7g0218941 24.330 933 562 35 26 906 30 870 1.52e-42 168
Msa0490110 MtrunA17_Chr8g0338671 27.933 537 334 19 167 679 39 546 2.31e-42 164
Msa0490110 MtrunA17_Chr3g0085161 26.242 785 477 31 164 900 19 749 3.63e-42 167
Msa0490110 MtrunA17_Chr3g0078361 29.892 465 265 20 207 634 1 441 8.56e-42 159
Msa0490110 MtrunA17_Chr3g0085551 26.156 692 429 29 172 822 41 691 1.39e-41 164
Msa0490110 MtrunA17_Chr3g0083621 26.316 722 417 26 3 666 23 687 1.69e-41 165
Msa0490110 MtrunA17_Chr4g0010251 26.385 758 463 25 36 756 36 735 4.71e-41 163
Msa0490110 MtrunA17_Chr4g0071021 27.197 478 266 17 16 474 16 430 1.36e-40 155
Msa0490110 MtrunA17_Chr8g0338361 26.327 490 326 14 167 642 21 489 3.54e-39 153
Msa0490110 MtrunA17_Chr3g0085091 24.660 957 598 36 1 900 1 891 1.70e-38 155
Msa0490110 MtrunA17_Chr8g0352211 26.000 650 432 17 26 663 1030 1642 1.98e-38 156
Msa0490110 MtrunA17_Chr3g0085171 25.503 745 455 28 38 752 36 710 2.25e-38 155
Msa0490110 MtrunA17_Chr6g0456131 25.594 715 429 25 26 704 29 676 1.03e-37 153
Msa0490110 MtrunA17_Chr3g0082321 25.385 650 365 21 38 663 47 600 1.47e-37 151
Msa0490110 MtrunA17_Chr3g0113781 27.006 511 320 14 228 721 3 477 3.36e-37 150
Msa0490110 MtrunA17_Chr5g0417251 26.395 663 386 25 269 881 19 629 6.22e-37 148
Msa0490110 MtrunA17_Chr5g0417301 25.191 655 352 21 18 643 18 563 6.39e-37 147
Msa0490110 MtrunA17_Chr5g0430331 26.543 486 276 18 1 462 1 429 7.54e-37 144
Msa0490110 MtrunA17_Chr2g0309151 27.434 452 285 15 235 664 3 433 9.36e-37 145
Msa0490110 MtrunA17_Chr1g0197181 27.255 510 322 13 438 901 2 508 4.77e-36 144
Msa0490110 MtrunA17_Chr3g0084061 26.908 773 488 27 177 906 162 900 4.78e-36 148
Msa0490110 MtrunA17_Chr8g0356251 27.536 552 337 21 150 663 150 676 1.01e-35 147
Msa0490110 MtrunA17_Chr5g0414291 26.464 427 265 15 1 410 1 395 2.26e-35 139
Msa0490110 MtrunA17_Chr1g0189301 51.064 141 59 5 65 204 2 133 2.48e-35 130
Msa0490110 MtrunA17_Chr3g0083721 28.675 551 331 22 134 663 84 593 4.01e-35 144
Msa0490110 MtrunA17_Chr3g0087301 22.338 958 569 39 1 899 1 842 1.47e-34 143
Msa0490110 MtrunA17_Chr3g0080871 26.519 543 326 19 169 666 150 664 9.43e-34 140
Msa0490110 MtrunA17_Chr5g0413811 25.562 712 453 29 235 920 3 663 1.40e-33 138
Msa0490110 MtrunA17_Chr3g0091971 26.214 618 379 21 156 753 125 685 1.60e-33 140
Msa0490110 MtrunA17_Chr6g0456121 26.145 677 412 26 175 826 151 764 8.27e-33 137
Msa0490110 MtrunA17_Chr6g0468111 28.785 469 261 15 198 664 70 467 2.33e-32 132
Msa0490110 MtrunA17_Chr5g0430901 25.854 410 255 10 1 397 1 374 2.48e-32 135
Msa0490110 MtrunA17_Chr3g0101171 54.808 104 47 0 437 540 5 108 3.12e-32 121
Msa0490110 MtrunA17_Chr6g0468401 26.810 373 221 12 1 360 1 334 1.24e-31 127
Msa0490110 MtrunA17_Chr1g0168901 24.968 773 440 28 33 753 42 726 2.60e-31 132
Msa0490110 MtrunA17_Chr5g0415551 26.786 560 327 22 154 666 13 536 9.87e-31 129
Msa0490110 MtrunA17_Chr6g0469991 26.098 387 245 11 16 395 16 368 3.55e-30 123
Msa0490110 MtrunA17_Chr6g0478721 23.169 587 399 17 201 754 91 658 4.51e-30 128
Msa0490110 MtrunA17_Chr1g0159111 25.941 478 315 16 201 664 174 626 1.39e-29 127
Msa0490110 MtrunA17_Chr4g0048421 23.618 597 386 21 201 753 173 743 2.66e-29 125
Msa0490110 MtrunA17_Chr3g0100841 56.000 100 39 3 1 97 1 98 8.78e-29 111
Msa0490110 MtrunA17_Chr1g0197191 28.205 351 215 9 54 400 13 330 1.39e-28 117
Msa0490110 MtrunA17_Chr8g0360991 26.945 527 307 16 189 675 159 647 2.06e-28 123
Msa0490110 MtrunA17_Chr7g0257551 28.443 334 211 9 172 486 86 410 2.36e-28 119
Msa0490110 MtrunA17_Chr8g0355071 27.915 283 177 8 223 496 29 293 2.50e-28 116
Msa0490110 MtrunA17_Chr2g0308491 31.111 270 155 6 194 453 10 258 4.49e-28 114
Msa0490110 MtrunA17_Chr4g0048471 25.000 472 304 15 201 651 48 490 6.87e-28 121
Msa0490110 MtrunA17_Chr3g0085701 29.275 345 207 10 154 480 123 448 7.28e-27 118
Msa0490110 MtrunA17_Chr2g0299141 27.635 351 220 10 337 663 34 374 1.29e-26 114
Msa0490110 MtrunA17_Chr1g0189261 55.319 94 39 2 1 93 1 92 3.44e-26 103
Msa0490110 MtrunA17_Chr3g0101161 36.735 196 111 2 734 925 2 188 2.79e-25 103
Msa0490110 MtrunA17_Chr3g0084811 24.048 919 552 33 50 893 212 1059 2.10e-24 110
Msa0490110 MtrunA17_Chr3g0101411 61.538 78 29 1 1 77 1 78 2.43e-24 97.4
Msa0490110 MtrunA17_Chr5g0410261 25.133 565 329 21 179 698 161 676 2.88e-24 110
Msa0490110 MtrunA17_Chr4g0010491 29.429 333 207 9 129 455 116 426 6.37e-24 105
Msa0490110 MtrunA17_Chr3g0083591 26.975 519 302 18 194 666 154 641 4.10e-23 106
Msa0490110 MtrunA17_Chr1g0189331 46.789 109 54 1 692 796 1 109 4.91e-23 95.1
Msa0490110 MtrunA17_Chr7g0248411 24.850 334 223 9 71 394 5 320 5.65e-23 101
Msa0490110 MtrunA17_Chr2g0299131 30.043 233 137 5 175 395 2 220 6.03e-23 98.6
Msa0490110 MtrunA17_Chr3g0100261 26.078 510 307 16 201 675 173 647 1.00e-22 105
Msa0490110 MtrunA17_Chr5g0416571 24.365 394 218 13 1 378 1 330 1.90e-22 99.8
Msa0490110 MtrunA17_Chr5g0410301 25.310 565 323 18 175 698 139 645 2.12e-22 103
Msa0490110 MtrunA17_Chr3g0083641 23.826 596 322 19 143 666 117 652 2.30e-22 103
Msa0490110 MtrunA17_Chr2g0282981 25.193 389 250 10 19 397 26 383 6.72e-22 99.8
Msa0490110 MtrunA17_Chr8g0338861 27.324 355 243 9 314 663 7 351 1.31e-21 100
Msa0490110 MtrunA17_Chr6g0470001 26.679 521 313 22 427 910 3 491 1.40e-21 100
Msa0490110 MtrunA17_Chr5g0410481 24.320 588 309 22 212 732 179 697 1.59e-21 101
Msa0490110 MtrunA17_Chr3g0085721 31.513 238 130 7 172 398 143 358 2.87e-21 97.1
Msa0490110 MtrunA17_Chr8g0392521 29.808 208 135 5 157 357 115 318 2.99e-21 96.3
Msa0490110 MtrunA17_Chr6g0468141 27.931 290 164 10 112 397 3 251 3.67e-21 94.4
Msa0490110 MtrunA17_Chr3g0083681 24.721 538 307 20 169 663 145 627 5.84e-21 99.4
Msa0490110 MtrunA17_Chr5g0415491 28.692 237 141 8 155 380 2 221 9.22e-21 92.0
Msa0490110 MtrunA17_Chr1g0169941 29.644 253 160 9 269 515 34 274 4.11e-20 92.8
Msa0490110 MtrunA17_Chr3g0086071 28.779 344 212 10 424 751 11 337 6.50e-20 95.1
Msa0490110 MtrunA17_Chr3g0099571 24.067 777 488 33 164 891 136 859 7.60e-20 95.9
Msa0490110 MtrunA17_Chr8g0338681 31.081 222 139 6 268 482 26 240 7.93e-20 90.1
Msa0490110 MtrunA17_Chr3g0105571 26.025 488 300 15 201 661 119 572 8.75e-20 94.4
Msa0490110 MtrunA17_Chr3g0091961 28.324 346 209 15 336 663 6 330 1.09e-19 92.8
Msa0490110 MtrunA17_Chr3g0082371 30.070 286 162 10 388 663 1 258 2.40e-19 92.4
Msa0490110 MtrunA17_Chr3g0082381 26.667 315 189 11 34 336 43 327 3.23e-19 90.1
Msa0490110 MtrunA17_Chr3g0107211 23.438 576 322 22 201 722 169 679 5.54e-19 92.8
Msa0490110 MtrunA17_Chr3g0085431 24.954 549 331 21 380 900 2 497 1.19e-18 90.5
Msa0490110 MtrunA17_Chr5g0410401 22.388 670 379 22 194 798 39 632 1.58e-18 91.3
Msa0490110 MtrunA17_Chr3g0108811 25.000 552 333 22 185 701 162 667 1.68e-18 91.7
Msa0490110 MtrunA17_Chr3g0108011 24.242 528 296 24 185 663 186 658 1.77e-18 91.7
Msa0490110 MtrunA17_Chr3g0091121 26.214 412 263 13 428 817 24 416 3.91e-18 89.7
Msa0490110 MtrunA17_Chr6g0468361 31.452 248 142 11 428 664 4 234 8.99e-18 87.4
Msa0490110 MtrunA17_Chr5g0439121 24.651 645 395 25 44 663 32 610 1.10e-17 89.0
Msa0490110 MtrunA17_Chr2g0282891 24.762 420 214 14 312 695 9 362 1.35e-17 85.9
Msa0490110 MtrunA17_Chr4g0041931 25.974 539 322 22 165 663 188 689 1.52e-17 88.2
Msa0490110 MtrunA17_Chr7g0255401 24.858 527 329 16 166 663 83 571 2.00e-17 88.2
Msa0490110 MtrunA17_Chr3g0085421 31.098 164 98 5 169 326 88 242 2.30e-17 82.8
Msa0490110 MtrunA17_Chr2g0319851 24.090 577 339 28 177 718 226 738 2.36e-17 87.8
Msa0490110 MtrunA17_Chr3g0108061 24.416 471 314 15 207 655 1 451 4.73e-17 85.9
Msa0490110 MtrunA17_Chr5g0414171 29.439 214 132 5 307 515 221 420 6.44e-17 84.3
Msa0490110 MtrunA17_Chr5g0414171 26.383 235 137 8 1 223 1 211 1.34e-11 67.8
Msa0490110 MtrunA17_Chr6g0468191 27.660 235 145 8 1 232 1 213 1.08e-16 81.3
Msa0490110 MtrunA17_Chr1g0189311 50.617 81 38 2 207 286 1 80 1.29e-16 75.5
Msa0490110 MtrunA17_Chr4g0041441 24.414 512 335 20 176 660 178 664 2.66e-16 84.3
Msa0490110 MtrunA17_Chr1g0189511 25.743 303 167 10 367 663 5 255 3.65e-16 79.7
Msa0490110 MtrunA17_Chr3g0108821 24.281 556 334 21 185 702 150 656 4.87e-16 83.6
Msa0490110 MtrunA17_Chr3g0096721 23.800 521 340 17 201 701 167 650 7.28e-16 82.8
Msa0490110 MtrunA17_Chr3g0108791 27.473 273 174 7 207 473 1 255 1.23e-15 80.5
Msa0490110 MtrunA17_Chr8g0338981 28.214 280 168 12 179 447 186 443 1.55e-15 81.6
Msa0490110 MtrunA17_Chr3g0100981 36.567 134 83 1 790 923 4 135 1.99e-15 74.3
Msa0490110 MtrunA17_Chr3g0100771 36.567 134 83 1 790 923 4 135 1.99e-15 74.3
Msa0490110 MtrunA17_Chr3g0096821 23.077 494 306 16 206 663 168 623 2.19e-15 81.3
Msa0490110 MtrunA17_Chr7g0257251 33.143 175 102 6 340 509 10 174 3.44e-15 74.7
Msa0490110 MtrunA17_Chr3g0108151 25.979 485 301 20 176 640 143 589 4.25e-15 80.5
Msa0490110 MtrunA17_Chr3g0105521 25.052 479 293 18 202 654 53 491 5.35e-15 80.1
Msa0490110 MtrunA17_Chr1g0146241 23.180 522 344 15 166 663 145 633 6.30e-15 80.1
Msa0490110 MtrunA17_Chr6g0454831 25.000 520 307 24 169 670 177 631 7.42e-15 79.3
Msa0490110 MtrunA17_Chr2g0319821 28.629 248 148 10 198 435 241 469 9.62e-15 79.3
Msa0490110 MtrunA17_Chr7g0221131 23.201 556 347 21 201 717 241 755 1.48e-14 78.2
Msa0490110 MtrunA17_Chr7g0221071 23.606 538 330 23 201 698 96 592 1.78e-14 77.8
Msa0490110 MtrunA17_Chr3g0100691 38.346 133 80 2 790 922 4 134 2.68e-14 70.9
Msa0490110 MtrunA17_Chr7g0221061 24.565 517 311 17 201 663 277 768 4.82e-14 76.6
Msa0490110 MtrunA17_Chr1g0189341 42.222 90 49 2 814 902 1 88 5.90e-14 69.3
Msa0490110 MtrunA17_Chr2g0313461 24.116 481 314 19 201 663 174 621 1.03e-13 75.9
Msa0490110 MtrunA17_Chr3g0107931 26.667 510 279 20 201 663 191 652 1.11e-13 75.9
Msa0490110 MtrunA17_Chr3g0097641 23.340 497 310 19 192 654 131 590 1.25e-13 75.5
Msa0490110 MtrunA17_Chr3g0108211 26.625 323 197 9 207 516 1 296 1.65e-13 73.9
Msa0490110 MtrunA17_Chr3g0105621 25.780 481 279 18 185 642 101 526 2.30e-13 73.9
Msa0490110 MtrunA17_Chr3g0107961 28.464 267 157 9 207 462 1 244 4.07e-13 72.4
Msa0490110 MtrunA17_Chr5g0413821 23.950 238 153 8 1 228 1 220 4.18e-13 69.7
Msa0490110 MtrunA17_Chr2g0313541 23.494 498 296 21 201 663 174 621 5.36e-13 73.6
Msa0490110 MtrunA17_Chr2g0314301 22.547 479 324 17 201 663 172 619 6.46e-13 73.2
Msa0490110 MtrunA17_Chr5g0415481 26.071 280 179 8 460 730 6 266 6.52e-13 72.0
Msa0490110 MtrunA17_Chr1g0167981 23.651 482 310 21 202 663 176 619 7.00e-13 73.6
Msa0490110 MtrunA17_Chr3g0105551 24.359 390 252 12 176 550 139 500 8.53e-13 73.2
Msa0490110 MtrunA17_Chr3g0108171 24.953 533 313 18 176 663 160 650 1.53e-12 72.0
Msa0490110 MtrunA17_Chr7g0255681 24.776 335 196 13 201 522 1216 1507 3.18e-12 71.2
Msa0490110 MtrunA17_Chr7g0255681 25.403 248 161 8 201 444 213 440 9.55e-12 69.7
Msa0490110 MtrunA17_Chr7g0255681 25.000 248 163 8 201 444 714 942 4.03e-11 67.4
Msa0490110 MtrunA17_Chr4g0009171 27.037 270 175 10 169 435 174 424 3.32e-12 71.2
Msa0490110 MtrunA17_Chr4g0009171 22.624 526 307 19 201 664 932 1419 9.09e-12 69.7
Msa0490110 MtrunA17_Chr6g0480271 28.846 260 162 10 179 435 198 437 3.43e-12 70.5
Msa0490110 MtrunA17_Chr5g0444291 38.043 92 37 1 290 361 6 97 3.51e-12 63.5
Msa0490110 MtrunA17_Chr3g0107621 24.786 351 221 12 184 518 149 472 3.83e-12 70.1
Msa0490110 MtrunA17_Chr2g0299811 23.088 667 405 28 179 821 39 621 4.97e-12 70.1
Msa0490110 MtrunA17_Chr6g0455131 24.633 341 213 16 110 435 200 511 5.23e-12 70.1
Msa0490110 MtrunA17_Chr7g0256881 22.687 789 502 34 142 872 147 885 5.27e-12 70.5
Msa0490110 MtrunA17_Chr4g0009301 25.424 354 222 15 169 518 714 1029 6.10e-12 70.1
Msa0490110 MtrunA17_Chr4g0005891 23.321 536 319 21 201 692 249 736 6.66e-12 70.1
Msa0490110 MtrunA17_Chr1g0153981 24.648 284 176 11 192 465 196 451 7.83e-12 69.3
Msa0490110 MtrunA17_Chr7g0223531 29.720 286 157 16 179 447 197 455 1.02e-11 69.3
Msa0490110 MtrunA17_Chr3g0114401 26.690 281 173 11 179 447 67 326 1.14e-11 68.6
Msa0490110 MtrunA17_Chr7g0221141 23.673 490 301 21 207 672 1 441 1.36e-11 68.6
Msa0490110 MtrunA17_Chr7g0221021 24.948 485 295 23 201 660 207 647 1.37e-11 68.6
Msa0490110 MtrunA17_Chr5g0402671 22.746 743 434 30 174 891 159 786 1.44e-11 68.6
Msa0490110 MtrunA17_Chr4g0009141 25.070 359 217 15 169 518 694 1009 1.67e-11 68.9
Msa0490110 MtrunA17_Chr4g0009401 24.302 358 218 13 169 518 673 985 1.86e-11 68.6
Msa0490110 MtrunA17_Chr2g0313591 23.493 481 317 19 201 663 174 621 3.24e-11 67.8
Msa0490110 MtrunA17_Chr5g0414301 26.556 482 261 17 465 893 1 442 3.79e-11 67.0
Msa0490110 MtrunA17_Chr6g0479001 28.049 246 143 10 198 435 207 426 4.17e-11 67.4
Msa0490110 MtrunA17_Chr4g0010711 24.603 504 294 20 201 660 719 1180 4.85e-11 67.4
Msa0490110 MtrunA17_Chr4g0041231 26.502 283 182 10 176 453 195 456 5.01e-11 67.0
Msa0490110 MtrunA17_Chr5g0430531 25.830 271 159 9 179 435 188 430 5.64e-11 65.9
Msa0490110 MtrunA17_Chr3g0105481 25.625 480 283 18 192 650 108 534 6.01e-11 67.0
Msa0490110 MtrunA17_Chr6g0455211 24.800 500 303 20 169 642 219 671 8.21e-11 66.2
Msa0490110 MtrunA17_Chr8g0363851 28.870 239 149 8 201 435 30 251 8.55e-11 66.2
Msa0490110 MtrunA17_Chr3g0097031 25.407 492 292 21 201 654 117 571 9.04e-11 65.9
Msa0490110 MtrunA17_Chr3g0102271 24.363 353 213 13 178 518 196 506 1.00e-10 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0490110 AT3G07040.1 30.679 942 601 16 1 923 1 909 1.43e-142 448
Msa0490110 AT5G48620.6 28.333 960 592 26 1 923 1 901 6.66e-94 318
Msa0490110 AT5G48620.1 28.333 960 592 26 1 923 1 901 6.66e-94 318
Msa0490110 AT5G48620.4 28.333 960 592 26 1 923 1 901 6.66e-94 318
Msa0490110 AT5G48620.2 28.333 960 592 26 1 923 1 901 6.66e-94 318
Msa0490110 AT5G48620.3 28.333 960 592 26 1 923 1 901 6.66e-94 318
Msa0490110 AT5G48620.5 28.333 960 592 26 1 923 1 901 6.66e-94 318
Msa0490110 AT5G43470.3 27.983 947 612 28 1 923 1 901 2.73e-90 308
Msa0490110 AT5G43470.2 27.983 947 612 28 1 923 1 901 2.73e-90 308
Msa0490110 AT5G43470.4 27.983 947 612 28 1 923 1 901 2.73e-90 308
Msa0490110 AT5G43470.1 27.983 947 612 28 1 923 1 901 2.73e-90 308
Msa0490110 AT5G35450.2 27.263 950 604 29 1 923 1 890 1.75e-88 303
Msa0490110 AT5G35450.1 27.263 950 604 29 1 923 1 890 1.75e-88 303
Msa0490110 AT1G58390.1 27.737 959 597 29 1 923 1 899 2.03e-86 297
Msa0490110 AT1G58390.2 27.737 959 597 29 1 923 1 899 2.03e-86 297
Msa0490110 AT1G58400.3 26.931 958 610 26 1 923 1 903 5.71e-84 290
Msa0490110 AT1G58400.2 26.931 958 610 26 1 923 1 903 5.71e-84 290
Msa0490110 AT1G53350.1 26.618 958 609 27 1 923 1 899 2.77e-82 285
Msa0490110 AT1G59780.2 26.556 964 600 30 1 932 1 888 4.89e-82 285
Msa0490110 AT1G59780.1 26.556 964 600 30 1 932 6 893 9.98e-82 284
Msa0490110 AT3G46530.1 28.286 852 543 23 1 847 1 789 1.59e-80 279
Msa0490110 AT1G58400.1 26.618 958 603 26 1 923 1 893 5.38e-80 279
Msa0490110 AT3G50950.2 29.126 824 498 29 1 793 1 769 8.64e-79 275
Msa0490110 AT3G50950.1 29.126 824 498 29 1 793 1 769 8.64e-79 275
Msa0490110 AT1G50180.1 31.081 666 394 18 1 642 1 625 2.60e-78 273
Msa0490110 AT1G58410.1 25.817 949 616 29 6 923 4 895 2.42e-74 263
Msa0490110 AT1G58410.4 25.817 949 616 29 6 923 4 895 2.42e-74 263
Msa0490110 AT1G58410.2 25.817 949 616 29 6 923 4 895 2.42e-74 263
Msa0490110 AT3G46730.1 27.491 873 546 22 1 854 1 805 1.07e-73 260
Msa0490110 AT3G46710.1 27.746 883 520 30 1 845 1 803 2.78e-73 259
Msa0490110 AT1G59124.2 25.651 1037 621 31 1 927 1 997 6.18e-72 258
Msa0490110 AT1G58807.1 25.651 1037 621 31 1 927 1 997 6.18e-72 258
Msa0490110 AT1G59218.1 26.321 927 577 30 1 881 1 867 4.10e-71 256
Msa0490110 AT1G59218.2 26.321 927 577 30 1 881 1 867 4.10e-71 256
Msa0490110 AT1G59218.3 26.321 927 577 30 1 881 1 867 4.10e-71 256
Msa0490110 AT1G58848.1 26.321 927 577 30 1 881 1 867 4.10e-71 256
Msa0490110 AT1G58848.2 26.321 927 577 30 1 881 1 867 4.10e-71 256
Msa0490110 AT1G59620.2 26.104 770 492 18 175 923 24 737 8.70e-65 233
Msa0490110 AT1G59124.1 26.107 881 567 26 1 850 1 828 1.80e-64 234
Msa0490110 AT1G58807.2 26.107 881 567 26 1 850 1 828 1.80e-64 234
Msa0490110 AT1G58410.3 24.576 944 602 29 6 923 4 863 1.68e-61 225
Msa0490110 AT1G58602.2 25.271 922 591 26 1 881 1 865 4.20e-59 221
Msa0490110 AT1G58602.1 25.271 922 591 26 1 881 1 865 4.20e-59 221
Msa0490110 AT1G10920.1 29.018 703 420 24 175 839 37 698 7.09e-58 213
Msa0490110 AT1G10920.2 29.018 703 420 24 175 839 37 698 7.09e-58 213
Msa0490110 AT1G10920.4 29.018 703 420 24 175 839 37 698 7.09e-58 213
Msa0490110 AT3G14460.1 27.006 885 508 31 34 880 39 823 4.98e-51 196
Msa0490110 AT3G14470.1 27.457 641 393 20 53 663 56 654 1.19e-49 191
Msa0490110 AT3G14470.2 27.457 641 393 20 53 663 56 654 1.19e-49 191
Msa0490110 AT4G26090.1 25.496 706 431 25 176 856 153 788 1.30e-38 156
Msa0490110 AT1G10920.5 27.715 534 322 16 341 839 24 528 7.77e-37 147
Msa0490110 AT1G10920.3 27.715 534 322 16 341 839 24 528 7.77e-37 147
Msa0490110 AT1G12280.1 27.027 481 315 14 178 642 157 617 1.22e-35 146
Msa0490110 AT5G63020.1 26.046 526 344 15 167 672 141 641 4.62e-35 144
Msa0490110 AT4G10780.1 26.915 483 312 18 201 663 175 636 1.16e-33 140
Msa0490110 AT4G10780.2 26.915 483 312 18 201 663 175 636 1.26e-33 140
Msa0490110 AT1G12220.3 26.482 506 319 18 201 698 57 517 7.82e-33 137
Msa0490110 AT1G61190.2 27.391 460 297 18 201 642 175 615 1.18e-32 137
Msa0490110 AT1G61190.3 27.391 460 297 18 201 642 175 615 1.18e-32 137
Msa0490110 AT1G12220.1 26.654 529 333 19 178 698 157 638 1.80e-32 136
Msa0490110 AT1G12220.2 26.654 529 333 19 178 698 157 638 1.80e-32 136
Msa0490110 AT1G61190.1 27.293 458 300 17 201 642 175 615 3.65e-32 135
Msa0490110 AT1G61310.1 27.689 502 313 21 173 645 147 627 6.74e-32 134
Msa0490110 AT1G61180.1 26.400 500 311 20 173 645 145 614 2.50e-31 132
Msa0490110 AT1G61180.2 26.400 500 311 20 173 645 145 614 2.55e-31 132
Msa0490110 AT1G12210.3 26.465 495 298 15 201 663 136 596 2.67e-31 132
Msa0490110 AT1G12210.2 26.465 495 298 15 201 663 136 596 2.67e-31 132
Msa0490110 AT1G12210.1 26.465 495 298 15 201 663 178 638 4.36e-31 132
Msa0490110 AT1G61300.1 27.130 446 285 18 201 628 63 486 7.80e-31 130
Msa0490110 AT1G61190.4 27.152 453 282 17 201 642 175 590 9.78e-31 130
Msa0490110 AT1G63350.4 25.399 626 387 26 110 723 105 662 1.20e-30 130
Msa0490110 AT1G63350.1 25.399 626 387 26 110 723 105 662 1.22e-30 130
Msa0490110 AT4G27190.1 27.236 492 295 16 202 663 167 625 1.27e-30 130
Msa0490110 AT1G63350.3 25.399 626 387 26 110 723 105 662 1.44e-30 130
Msa0490110 AT1G63350.2 25.399 626 387 26 110 723 105 662 1.44e-30 130
Msa0490110 AT1G61300.2 27.416 445 260 18 201 628 63 461 3.93e-29 125
Msa0490110 AT5G47250.1 26.358 497 297 16 198 663 175 633 3.41e-28 122
Msa0490110 AT5G05400.1 26.223 511 325 22 173 663 147 625 4.01e-28 122
Msa0490110 AT1G51480.1 25.490 459 295 17 206 642 180 613 4.25e-28 122
Msa0490110 AT1G12290.4 27.232 448 279 18 201 624 135 559 1.11e-27 120
Msa0490110 AT1G12290.3 27.232 448 279 18 201 624 135 559 1.11e-27 120
Msa0490110 AT1G12290.2 27.232 448 279 18 201 624 135 559 1.11e-27 120
Msa0490110 AT1G12290.1 27.232 448 279 18 201 624 177 601 1.21e-27 120
Msa0490110 AT4G27220.1 26.380 489 300 21 202 663 137 592 2.19e-27 120
Msa0490110 AT4G27220.2 26.380 489 300 21 202 663 145 600 2.73e-27 120
Msa0490110 AT5G05400.2 25.523 478 312 19 201 663 8 456 7.34e-27 117
Msa0490110 AT5G05400.3 25.523 478 312 19 201 663 8 456 7.34e-27 117
Msa0490110 AT5G43740.1 26.115 471 305 17 198 648 170 617 1.68e-26 117
Msa0490110 AT5G43740.2 26.115 471 305 17 198 648 170 617 1.68e-26 117
Msa0490110 AT5G47260.1 25.000 484 313 14 202 667 172 623 1.72e-26 117
Msa0490110 AT5G43730.4 26.709 468 307 17 198 649 171 618 1.12e-25 114
Msa0490110 AT5G43730.1 26.709 468 307 17 198 649 171 618 1.12e-25 114
Msa0490110 AT5G43730.3 26.709 468 307 17 198 649 171 618 1.12e-25 114
Msa0490110 AT5G43730.2 26.709 468 307 17 198 649 171 618 1.12e-25 114
Msa0490110 AT5G43730.5 26.709 468 307 17 198 649 171 618 1.12e-25 114
Msa0490110 AT1G12280.2 25.417 480 291 17 178 642 119 546 6.79e-25 112
Msa0490110 AT1G15890.2 26.170 470 299 18 198 645 13 456 8.15e-25 111
Msa0490110 AT1G15890.1 26.170 470 299 18 198 645 173 616 1.74e-24 110
Msa0490110 AT1G63360.2 27.340 406 264 12 282 666 216 611 7.15e-23 105
Msa0490110 AT1G63360.1 27.228 404 267 11 282 666 251 646 8.87e-23 105
Msa0490110 AT1G62630.1 27.427 412 254 14 281 663 250 645 8.01e-22 102
Msa0490110 AT5G17680.2 22.462 788 449 33 201 935 209 887 6.96e-19 93.2
Msa0490110 AT5G17680.1 22.462 788 449 33 201 935 208 886 7.20e-19 93.2
Msa0490110 AT4G33300.2 28.231 294 171 12 179 465 182 442 1.49e-14 79.0
Msa0490110 AT4G33300.1 28.231 294 171 12 179 465 182 442 1.49e-14 79.0
Msa0490110 AT4G16950.5 22.356 747 450 31 177 882 187 844 9.85e-13 73.2
Msa0490110 AT4G16950.4 22.356 747 450 31 177 882 187 844 1.05e-12 73.2
Msa0490110 AT4G16950.6 22.356 747 450 31 177 882 187 844 1.17e-12 72.8
Msa0490110 AT4G16950.2 22.356 747 450 31 177 882 187 844 1.38e-12 72.8
Msa0490110 AT4G16950.1 22.356 747 450 31 177 882 187 844 1.39e-12 72.8
Msa0490110 AT4G16950.3 22.356 747 450 31 177 882 187 844 1.52e-12 72.4
Msa0490110 AT5G04720.1 25.714 280 173 9 179 455 180 427 3.56e-12 70.9

Find 180 sgRNAs with CRISPR-Local

Find 222 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCGCATAATCAAAGAATTT+TGG 0.112895 3_4:-11495322 None:intergenic
TCTTTGTTAGACTTGTTAAA+TGG 0.164657 3_4:-11493788 None:intergenic
TCCAAAGAAATTACGCAAAT+TGG 0.167317 3_4:+11493317 Msa0490110:CDS
AAGAGCTCCCATGCTTTATT+TGG 0.180562 3_4:-11493564 None:intergenic
AGTTAAGGAGGTTAGGTTTA+AGG 0.182908 3_4:+11494687 Msa0490110:CDS
TGAAGAAAAGTATTCTCTTT+TGG 0.193899 3_4:+11494541 Msa0490110:CDS
ATCTGTTTAAGTTTGGTCTA+TGG 0.197924 3_4:+11494978 Msa0490110:CDS
TCCAATTTGCGTAATTTCTT+TGG 0.233091 3_4:-11493318 None:intergenic
TCAAAGTTCCTTTGTCTATA+AGG 0.239327 3_4:-11495099 None:intergenic
AGAAATGTCTAGTTGGTTAT+TGG 0.240868 3_4:+11493089 Msa0490110:CDS
TGCAGTTCACCAACAGATTT+AGG 0.257934 3_4:-11494413 None:intergenic
CTACTACCTTTATTGTTGTT+TGG 0.259161 3_4:-11493453 None:intergenic
TCAACAAGATACTCCAGTTT+TGG 0.263121 3_4:-11494893 None:intergenic
ACTGGTGTGTTCATGGAAAA+AGG 0.287352 3_4:+11494572 Msa0490110:CDS
TTAATTTGCTCATGACTCTT+TGG 0.295980 3_4:-11495365 None:intergenic
TGGCATTTCAGTGAAGTTAA+TGG 0.299891 3_4:-11495206 None:intergenic
CAACTAGACATTTCTTCTCT+TGG 0.317402 3_4:-11493081 None:intergenic
CCCTTCTATCTGCATCTTTG+AGG 0.320503 3_4:-11492663 None:intergenic
TTGCCATATCTGTTTAAGTT+TGG 0.322192 3_4:+11494971 Msa0490110:CDS
GTCTCAAATGTTGGCTTTGA+AGG 0.322964 3_4:+11494020 Msa0490110:CDS
GAAGAAACAAATCTTCTTAG+AGG 0.328016 3_4:+11492586 Msa0490110:CDS
CTGAGGGTACCTCCTTCAGC+TGG 0.335878 3_4:-11495156 None:intergenic
TTTCTCTTTCTTCAATGAAA+AGG 0.338650 3_4:-11493041 None:intergenic
ATTGAAGAAAGAGAAATTGT+AGG 0.343468 3_4:+11493048 Msa0490110:CDS
GGCATTAGAGAGACAGAAAA+TGG 0.350246 3_4:+11492991 Msa0490110:CDS
TCAAATACCTCTTATGTTGC+AGG 0.353940 3_4:-11493374 None:intergenic
TATTTGGATGTAAAAGTTGC+AGG 0.361113 3_4:-11493548 None:intergenic
GCCTGAATGGATCCCAAAAC+TGG 0.362843 3_4:+11494880 Msa0490110:CDS
AATATAAAACAATGATTGAA+TGG 0.374382 3_4:+11493721 Msa0490110:CDS
AATCTTAATATCACTACAAT+AGG 0.376002 3_4:+11494773 Msa0490110:CDS
ATGTAAAATTTCACCGTCAT+AGG 0.376463 3_4:-11495008 None:intergenic
TTCTACTATTGCAGCACATA+AGG 0.377811 3_4:-11494735 None:intergenic
CTTTACAACTGGTGTGTTCA+TGG 0.379572 3_4:+11494565 Msa0490110:CDS
GACATTAAGTTGTCGGTTCG+TGG 0.384495 3_4:+11492901 Msa0490110:CDS
AGAGAAATTGTAGGATTTGA+AGG 0.395854 3_4:+11493057 Msa0490110:CDS
GCTATGCCAAACAACAATAA+AGG 0.398978 3_4:+11493447 Msa0490110:CDS
AACTAGACATTTCTTCTCTT+GGG 0.401812 3_4:-11493080 None:intergenic
GATTCAAAGAAGTCTGGTTC+AGG 0.402298 3_4:+11493998 Msa0490110:CDS
CTTTGTTAGACTTGTTAAAT+GGG 0.407930 3_4:-11493787 None:intergenic
TCCTCAAAGATGCAGATAGA+AGG 0.408015 3_4:+11492662 Msa0490110:CDS
AGCTGAACGCACTGTGATTT+CGG 0.409411 3_4:+11493119 Msa0490110:CDS
GGTGAGTCAAAATCTGAGTT+TGG 0.411665 3_4:+11493749 Msa0490110:CDS
TCAAATGAAGTCGTCGAAGC+TGG 0.413925 3_4:-11494838 None:intergenic
TGATATTCTTTGATGATGTA+TGG 0.415386 3_4:+11493394 Msa0490110:CDS
GATCAACCTCCACATAATAT+AGG 0.418202 3_4:-11494622 None:intergenic
AGACCAAACTTAAACAGATA+TGG 0.418374 3_4:-11494974 None:intergenic
TTCTCTTTCTTCAATGAAAA+GGG 0.419102 3_4:-11493040 None:intergenic
TTAAGACAGTTAAGGAGGTT+AGG 0.421970 3_4:+11494680 Msa0490110:CDS
TGAACCGTTAAAACATATCA+TGG 0.422896 3_4:+11494253 Msa0490110:CDS
ACCCTCAGGCATTAGGTCCT+TGG 0.427974 3_4:+11495171 Msa0490110:CDS
TGAGGGTACCTCCTTCAGCT+GGG 0.431137 3_4:-11495155 None:intergenic
GATTCGAGACATTAAGTTGT+CGG 0.431472 3_4:+11492894 Msa0490110:CDS
AGGAGGTACCCTCAGGCATT+AGG 0.432569 3_4:+11495164 Msa0490110:CDS
TCTGTTTAAGTTTGGTCTAT+GGG 0.433813 3_4:+11494979 Msa0490110:CDS
TGAATTGATTCAAAGAAGTC+TGG 0.435892 3_4:+11493992 Msa0490110:CDS
TGAAAATGTTAAGACAGTTA+AGG 0.437178 3_4:+11494672 Msa0490110:CDS
GCGCTCTTCTGAACATTGTC+GGG 0.437992 3_4:-11494188 None:intergenic
TTGAGCTTGTTTATTTCACT+TGG 0.440813 3_4:-11494482 None:intergenic
GTATTTAGATTCGATCTTGA+TGG 0.442068 3_4:+11493597 Msa0490110:CDS
AACAATGATTGAATGGGAAC+AGG 0.443942 3_4:+11493728 Msa0490110:CDS
AATGCATGGTTTCAAGTAGT+AGG 0.446470 3_4:-11493838 None:intergenic
CCTTCAAAACCTATATTATG+TGG 0.448399 3_4:+11494613 Msa0490110:CDS
AAAATGCAAGCAGCTACCTT+TGG 0.450696 3_4:+11493665 Msa0490110:CDS
GTGGTAGGAATGGGAGGTCT+AGG 0.455889 3_4:+11493141 Msa0490110:CDS
TCAAAATCTGAGTTTGGAGT+TGG 0.457641 3_4:+11493755 Msa0490110:CDS
AACTAGATTCATTGCCTGAA+TGG 0.458353 3_4:+11494867 Msa0490110:CDS
ATACCATCGGCTGATGCATA+TGG 0.462275 3_4:+11492777 Msa0490110:CDS
TGTTGGTGAACTGCAGAACT+TGG 0.463438 3_4:+11494421 Msa0490110:CDS
TATTCCTCTGCTATATGCTC+TGG 0.463936 3_4:-11493963 None:intergenic
TATTATGTGGAGGTTGATCA+TGG 0.469906 3_4:+11494626 Msa0490110:CDS
ATTATGTGGAGGTTGATCAT+GGG 0.477503 3_4:+11494627 Msa0490110:CDS
TGTGATTTCGGTGGTAGGAA+TGG 0.478238 3_4:+11493131 Msa0490110:CDS
AGCGCTCTTCTGAACATTGT+CGG 0.480100 3_4:-11494189 None:intergenic
CGGGACTAGTGACTATAGAT+AGG 0.481212 3_4:-11494169 None:intergenic
CAAATGAAGTCGTCGAAGCT+GGG 0.481637 3_4:-11494837 None:intergenic
CAAACAACAATAAAGGTAGT+AGG 0.486757 3_4:+11493454 Msa0490110:CDS
TTGCGTAATTTCTTTGGAAG+AGG 0.488220 3_4:-11493312 None:intergenic
GCAGCTACCTTTGGCAATTG+TGG 0.488632 3_4:+11493674 Msa0490110:CDS
TATTTAGATTCGATCTTGAT+GGG 0.489078 3_4:+11493598 Msa0490110:CDS
GTTGTCGGTTCGTGGAATCA+AGG 0.490098 3_4:+11492909 Msa0490110:CDS
GTGATTTCGGTGGTAGGAAT+GGG 0.492523 3_4:+11493132 Msa0490110:CDS
CAGCTGAAGGAGGTACCCTC+AGG 0.492598 3_4:+11495157 Msa0490110:CDS
ATATAAAACAATGATTGAAT+GGG 0.494235 3_4:+11493722 Msa0490110:CDS
TGGGCCACTCGAGTGATGAA+TGG 0.495247 3_4:-11495302 None:intergenic
CAAAATCTGAGTTTGGAGTT+GGG 0.496007 3_4:+11493756 Msa0490110:CDS
CTGGTTCAGGTCTCAAATGT+TGG 0.496512 3_4:+11494011 Msa0490110:CDS
CGTTATCTTCACGCACAGAA+TGG 0.500350 3_4:-11494118 None:intergenic
TCCACCGCATCCTGGAGGAT+TGG 0.504201 3_4:-11492806 None:intergenic
TAAATGATGGAATAAGAACT+TGG 0.504571 3_4:+11492704 Msa0490110:CDS
AAGAAACAAATCTTCTTAGA+GGG 0.505795 3_4:+11492587 Msa0490110:CDS
AATAAAGATCCACCGCATCC+TGG 0.508983 3_4:-11492814 None:intergenic
TTGAAGGTACTTGACATTCA+AGG 0.510273 3_4:+11494302 Msa0490110:CDS
GATGAAGCAGACATAAATGA+TGG 0.510622 3_4:+11492691 Msa0490110:CDS
TCTTGATGGGCACTGTCCAC+CGG 0.514780 3_4:+11493611 Msa0490110:CDS
GAGGGTACCTCCTTCAGCTG+GGG 0.518269 3_4:-11495154 None:intergenic
AATGTCTAGTTGGTTATTGG+AGG 0.518794 3_4:+11493092 Msa0490110:CDS
CTCAGATGCTATATGATGAC+GGG 0.519190 3_4:-11492872 None:intergenic
ATGCTTTCAACAAATTCAGC+TGG 0.524528 3_4:-11495226 None:intergenic
TCTCAAATGTTGGCTTTGAA+GGG 0.528463 3_4:+11494021 Msa0490110:CDS
CAAGAGAAGAAATGTCTAGT+TGG 0.528706 3_4:+11493082 Msa0490110:CDS
TGCGTAATTTCTTTGGAAGA+GGG 0.531477 3_4:-11493311 None:intergenic
CAGGCTCTTCCTAAATCTGT+TGG 0.534807 3_4:+11494404 Msa0490110:CDS
TGATTAATAGAGTAGTCCTC+TGG 0.535663 3_4:-11493879 None:intergenic
TCACTTGCCGCAATAAATCA+TGG 0.536525 3_4:-11494064 None:intergenic
GGAATTGGAACACTTCCGCT+AGG 0.540464 3_4:-11492558 None:intergenic
ATTCGACAATGGATAGCTGA+AGG 0.542244 3_4:+11493912 Msa0490110:CDS
CAATCAAAGTGTGTTGCTAC+TGG 0.544967 3_4:-11493201 None:intergenic
AGGGTACCTCCTTCAGCTGG+GGG 0.546435 3_4:-11495153 None:intergenic
ATGCATGGTTTCAAGTAGTA+GGG 0.549680 3_4:-11493837 None:intergenic
ATTGACATAGCCTCAAGCTC+CGG 0.550312 3_4:-11493630 None:intergenic
TTTACATCCAAATAAAGCAT+GGG 0.554043 3_4:+11493557 Msa0490110:CDS
GTATCTTGTTGAGATAAAGC+TGG 0.556188 3_4:+11494904 Msa0490110:CDS
ACTGCAGAACTTGGAGACAT+TGG 0.557921 3_4:+11494430 Msa0490110:CDS
ATGGTGGGTTTCTAAAATTG+AGG 0.558084 3_4:+11495038 Msa0490110:CDS
CCTTTGGCAATTGTGGCTAT+CGG 0.560644 3_4:+11493681 Msa0490110:CDS
CTATGGGACAACGCCTATGA+CGG 0.561043 3_4:+11494995 Msa0490110:CDS
ATGGTTTCAAGTAGTAGGGC+AGG 0.561729 3_4:-11493833 None:intergenic
GAGAGACAGAAAATGGAAGA+TGG 0.562297 3_4:+11492998 Msa0490110:CDS
GGCAATACCTGCAACATAAG+AGG 0.563343 3_4:+11493367 Msa0490110:CDS
TTGCCATATGCATCAGCCGA+TGG 0.564299 3_4:-11492780 None:intergenic
AATGGCTTTGAGTTTGTCCA+AGG 0.565272 3_4:-11495188 None:intergenic
ACTTAAGGTACTTAAACCTA+CGG 0.567854 3_4:+11494369 Msa0490110:CDS
ATGGCAAAATCCAATCCTCC+AGG 0.567976 3_4:+11492796 Msa0490110:CDS
AGGTTTGTTGATAAACATGA+TGG 0.571819 3_4:+11493263 Msa0490110:CDS
TCCAATCCTCCAGGATGCGG+TGG 0.572922 3_4:+11492805 Msa0490110:CDS
AAATCCAATCCTCCAGGATG+CGG 0.573824 3_4:+11492802 Msa0490110:CDS
CCTCAAAGATGCAGATAGAA+GGG 0.576280 3_4:+11492663 Msa0490110:CDS
TATGTGGAGGTTGATCATGG+GGG 0.577227 3_4:+11494629 Msa0490110:CDS
TCTCAATCATACACTGTGAG+AGG 0.577652 3_4:+11493243 Msa0490110:CDS
GTCAAGTCCATGATTTATTG+CGG 0.577796 3_4:+11494057 Msa0490110:CDS
TGCAACATGCATCATTCTAG+TGG 0.578698 3_4:-11493487 None:intergenic
TCTCAGATGCTATATGATGA+CGG 0.580730 3_4:-11492873 None:intergenic
CAAGGATCATCAAGCAGCAA+CGG 0.580964 3_4:+11492970 Msa0490110:CDS
ATGTCTAGTTGGTTATTGGA+GGG 0.582595 3_4:+11493093 Msa0490110:CDS
TTCGACAATGGATAGCTGAA+GGG 0.583700 3_4:+11493913 Msa0490110:CDS
GATAACGAATCAATCGCGGT+TGG 0.584713 3_4:+11494134 Msa0490110:CDS
GAATTGGAACACTTCCGCTA+GGG 0.585640 3_4:-11492557 None:intergenic
GCACTGTCCACCGGAGCTTG+AGG 0.586465 3_4:+11493620 Msa0490110:CDS
AAAGTTGCAGGTTGTGAACA+TGG 0.586950 3_4:-11493536 None:intergenic
TGAAGTCGTCGAAGCTGGGG+TGG 0.587641 3_4:-11494833 None:intergenic
CGCACTGTGATTTCGGTGGT+AGG 0.591328 3_4:+11493126 Msa0490110:CDS
AAATGTTAAGACAGTTAAGG+AGG 0.591766 3_4:+11494675 Msa0490110:CDS
GAACCGTTAAAACATATCAT+GGG 0.591835 3_4:+11494254 Msa0490110:CDS
TTGGCAATTGTGGCTATCGG+CGG 0.596756 3_4:+11493684 Msa0490110:CDS
TGCAGTATTATTTGCCCTAG+CGG 0.604632 3_4:+11492543 Msa0490110:CDS
ATACCAAAATACAAAATGCA+TGG 0.605249 3_4:-11493852 None:intergenic
AAATGATGGAATAAGAACTT+GGG 0.606094 3_4:+11492705 Msa0490110:CDS
TTGGCATAGCAAATTCAACC+TGG 0.606795 3_4:-11493434 None:intergenic
CATAGCAAATTCAACCTGGT+CGG 0.607344 3_4:-11493430 None:intergenic
GAAAGCATTGATCCAGACAA+AGG 0.609997 3_4:+11495241 Msa0490110:CDS
CAAAGTGTGTTGCTACTGGT+TGG 0.614806 3_4:-11493197 None:intergenic
TCAAAACCTATATTATGTGG+AGG 0.615068 3_4:+11494616 Msa0490110:CDS
CTCTCTTGAATATCTTACCA+TGG 0.615123 3_4:+11495123 Msa0490110:CDS
AGTTACGGTGGAAAGCAAGA+AGG 0.615694 3_4:-11494517 None:intergenic
AGGCATGTGAGAAGAGAACA+TGG 0.618304 3_4:+11494707 Msa0490110:CDS
GACATAGCCTCAAGCTCCGG+TGG 0.619208 3_4:-11493627 None:intergenic
GTCCAAGGACCTAATGCCTG+AGG 0.619351 3_4:-11495173 None:intergenic
AGTCATTAATTATAGAAGTG+AGG 0.620938 3_4:+11493346 Msa0490110:CDS
ATAAGAGATTAATTCGACAA+TGG 0.625218 3_4:+11493901 Msa0490110:CDS
TTTCAAATTTCAGATGAACA+AGG 0.625963 3_4:+11492952 Msa0490110:CDS
AAATGAAGTCGTCGAAGCTG+GGG 0.628714 3_4:-11494836 None:intergenic
ATGTGGAGGTTGATCATGGG+GGG 0.630615 3_4:+11494630 Msa0490110:CDS
TTATGTGGAGGTTGATCATG+GGG 0.631390 3_4:+11494628 Msa0490110:CDS
CATACTGTCCTTATAGACAA+AGG 0.631615 3_4:+11495091 Msa0490110:CDS
GTATCCATTCATCACTCGAG+TGG 0.633615 3_4:+11495298 Msa0490110:CDS
GTTGTGAACATGGACTAGAA+AGG 0.634320 3_4:-11493526 None:intergenic
AACTCCAGAGCATATAGCAG+AGG 0.634957 3_4:+11493959 Msa0490110:CDS
TGTGGAGGTTGATCATGGGG+GGG 0.637228 3_4:+11494631 Msa0490110:CDS
ATTTCGGTGGTAGGAATGGG+AGG 0.642623 3_4:+11493135 Msa0490110:CDS
GAGTGATGAATGGATACAAG+AGG 0.644359 3_4:-11495292 None:intergenic
TCCAAGGACCTAATGCCTGA+GGG 0.647406 3_4:-11495172 None:intergenic
ATATCATCGATGAATACCAT+CGG 0.647913 3_4:+11492764 Msa0490110:CDS
ATGAAAAGGGAAGACAGTCG+TGG 0.656464 3_4:-11493027 None:intergenic
AGAAACAAATCTTCTTAGAG+GGG 0.657873 3_4:+11492588 Msa0490110:CDS
CCGATAGCCACAATTGCCAA+AGG 0.659324 3_4:-11493681 None:intergenic
AAAGATCCACCGCATCCTGG+AGG 0.691718 3_4:-11492811 None:intergenic
GAATCAAGGAAAGAAGTGAG+AGG 0.698193 3_4:+11492923 Msa0490110:CDS
TGAACGCACTGTGATTTCGG+TGG 0.700176 3_4:+11493122 Msa0490110:CDS
TGAAGATAACGAATCAATCG+CGG 0.722391 3_4:+11494130 Msa0490110:CDS
GGCATGTGAGAAGAGAACAT+GGG 0.735513 3_4:+11494708 Msa0490110:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATAAAACAATGATTGAA+TGG + chr3_4:11493721-11493740 Msa0490110:CDS 15.0%
!! ATATAAAACAATGATTGAAT+GGG + chr3_4:11493722-11493741 Msa0490110:CDS 15.0%
!! AATCATATTCCCAAAAATTT+AGG + chr3_4:11494335-11494354 Msa0490110:CDS 20.0%
!! ATCATATTCCCAAAAATTTA+GGG + chr3_4:11494336-11494355 Msa0490110:CDS 20.0%
!!! AATACTTTTCTTCATAGTTA+CGG - chr3_4:11494535-11494554 None:intergenic 20.0%
!!! TAGTGATATTAAGATTTTCA+AGG - chr3_4:11494769-11494788 None:intergenic 20.0%
!! AATCTTAATATCACTACAAT+AGG + chr3_4:11494773-11494792 Msa0490110:CDS 20.0%
!!! GAAATTTTACATTTTCAGAA+TGG + chr3_4:11495019-11495038 Msa0490110:CDS 20.0%
!!! TTGTTTCTTCTTTTAGGAAT+TGG - chr3_4:11492576-11492595 None:intergenic 25.0%
!!! GAAGATTTGTTTCTTCTTTT+AGG - chr3_4:11492582-11492601 None:intergenic 25.0%
! AAGAAACAAATCTTCTTAGA+GGG + chr3_4:11492587-11492606 Msa0490110:CDS 25.0%
!! TAAATGATGGAATAAGAACT+TGG + chr3_4:11492704-11492723 Msa0490110:CDS 25.0%
!! AAATGATGGAATAAGAACTT+GGG + chr3_4:11492705-11492724 Msa0490110:CDS 25.0%
! TTTCAAATTTCAGATGAACA+AGG + chr3_4:11492952-11492971 Msa0490110:CDS 25.0%
! TTCTCTTTCTTCAATGAAAA+GGG - chr3_4:11493043-11493062 None:intergenic 25.0%
! TTTCTCTTTCTTCAATGAAA+AGG - chr3_4:11493044-11493063 None:intergenic 25.0%
! ATTGAAGAAAGAGAAATTGT+AGG + chr3_4:11493048-11493067 Msa0490110:CDS 25.0%
! AGTCATTAATTATAGAAGTG+AGG + chr3_4:11493346-11493365 Msa0490110:CDS 25.0%
!!! TGATATTCTTTGATGATGTA+TGG + chr3_4:11493394-11493413 Msa0490110:CDS 25.0%
!! TTTTACATCCAAATAAAGCA+TGG + chr3_4:11493556-11493575 Msa0490110:CDS 25.0%
! TTTACATCCAAATAAAGCAT+GGG + chr3_4:11493557-11493576 Msa0490110:CDS 25.0%
! TATTTAGATTCGATCTTGAT+GGG + chr3_4:11493598-11493617 Msa0490110:CDS 25.0%
!!! CTTTGTTAGACTTGTTAAAT+GGG - chr3_4:11493790-11493809 None:intergenic 25.0%
!!! TCTTTGTTAGACTTGTTAAA+TGG - chr3_4:11493791-11493810 None:intergenic 25.0%
!! ATTTTATCACTTAGTTACGA+TGG + chr3_4:11493810-11493829 Msa0490110:CDS 25.0%
!! AAACCATGCATTTTGTATTT+TGG + chr3_4:11493849-11493868 Msa0490110:CDS 25.0%
! ATACCAAAATACAAAATGCA+TGG - chr3_4:11493855-11493874 None:intergenic 25.0%
! ATAAGAGATTAATTCGACAA+TGG + chr3_4:11493901-11493920 Msa0490110:CDS 25.0%
! TTTCAAAAACATGAATAGCA+CGG - chr3_4:11494229-11494248 None:intergenic 25.0%
!!! GCTATTCATGTTTTTGAAAA+AGG + chr3_4:11494230-11494249 Msa0490110:CDS 25.0%
!!! TTACCCATGATATGTTTTAA+CGG - chr3_4:11494260-11494279 None:intergenic 25.0%
!!! TTCAAAGTCTAGTATTTTGA+AGG + chr3_4:11494286-11494305 Msa0490110:CDS 25.0%
!! AAAAGACTCCCTAAATTTTT+GGG - chr3_4:11494347-11494366 None:intergenic 25.0%
!! AAAAAGACTCCCTAAATTTT+TGG - chr3_4:11494348-11494367 None:intergenic 25.0%
!!! TGAAGAAAAGTATTCTCTTT+TGG + chr3_4:11494541-11494560 Msa0490110:CDS 25.0%
!!! GAAGAAAAGTATTCTCTTTT+GGG + chr3_4:11494542-11494561 Msa0490110:CDS 25.0%
!!! CACATAATATAGGTTTTGAA+GGG - chr3_4:11494615-11494634 None:intergenic 25.0%
! TGAAAATGTTAAGACAGTTA+AGG + chr3_4:11494672-11494691 Msa0490110:CDS 25.0%
!! ATTTTACATTTTCAGAATGG+TGG + chr3_4:11495022-11495041 Msa0490110:CDS 25.0%
!! TTTTACATTTTCAGAATGGT+GGG + chr3_4:11495023-11495042 Msa0490110:CDS 25.0%
!! TCGCATAATCAAAGAATTTT+GGG - chr3_4:11495324-11495343 None:intergenic 25.0%
!! ATCGCATAATCAAAGAATTT+TGG - chr3_4:11495325-11495344 None:intergenic 25.0%
GAAGAAACAAATCTTCTTAG+AGG + chr3_4:11492586-11492605 Msa0490110:CDS 30.0%
AGAAACAAATCTTCTTAGAG+GGG + chr3_4:11492588-11492607 Msa0490110:CDS 30.0%
ATATCATCGATGAATACCAT+CGG + chr3_4:11492764-11492783 Msa0490110:CDS 30.0%
!!! GGGTAATCAAAGTTTTGATT+AGG - chr3_4:11492855-11492874 None:intergenic 30.0%
AGAGAAATTGTAGGATTTGA+AGG + chr3_4:11493057-11493076 Msa0490110:CDS 30.0%
AACTAGACATTTCTTCTCTT+GGG - chr3_4:11493083-11493102 None:intergenic 30.0%
AGAAATGTCTAGTTGGTTAT+TGG + chr3_4:11493089-11493108 Msa0490110:CDS 30.0%
!! AGGTTTGTTGATAAACATGA+TGG + chr3_4:11493263-11493282 Msa0490110:CDS 30.0%
TCCAAAGAAATTACGCAAAT+TGG + chr3_4:11493317-11493336 Msa0490110:CDS 30.0%
TCCAATTTGCGTAATTTCTT+TGG - chr3_4:11493321-11493340 None:intergenic 30.0%
! CTACTACCTTTATTGTTGTT+TGG - chr3_4:11493456-11493475 None:intergenic 30.0%
CAAACAACAATAAAGGTAGT+AGG + chr3_4:11493454-11493473 Msa0490110:CDS 30.0%
TATTTGGATGTAAAAGTTGC+AGG - chr3_4:11493551-11493570 None:intergenic 30.0%
GTATTTAGATTCGATCTTGA+TGG + chr3_4:11493597-11493616 Msa0490110:CDS 30.0%
!!! GTATTTTGGTATATATCCAG+AGG + chr3_4:11493863-11493882 Msa0490110:CDS 30.0%
! TGAATTGATTCAAAGAAGTC+TGG + chr3_4:11493992-11494011 Msa0490110:CDS 30.0%
AGTGATCATTCGAAAAATGA+AGG + chr3_4:11494082-11494101 Msa0490110:CDS 30.0%
TGAACCGTTAAAACATATCA+TGG + chr3_4:11494253-11494272 Msa0490110:CDS 30.0%
GAACCGTTAAAACATATCAT+GGG + chr3_4:11494254-11494273 Msa0490110:CDS 30.0%
! ACTTAAGGTACTTAAACCTA+CGG + chr3_4:11494369-11494388 Msa0490110:CDS 30.0%
! TTGAGCTTGTTTATTTCACT+TGG - chr3_4:11494485-11494504 None:intergenic 30.0%
TAAACAAGCTCAAAAAGCTA+AGG + chr3_4:11494492-11494511 Msa0490110:CDS 30.0%
!! CCACATAATATAGGTTTTGA+AGG - chr3_4:11494616-11494635 None:intergenic 30.0%
CCTTCAAAACCTATATTATG+TGG + chr3_4:11494613-11494632 Msa0490110:CDS 30.0%
TCAAAACCTATATTATGTGG+AGG + chr3_4:11494616-11494635 Msa0490110:CDS 30.0%
AAATGTTAAGACAGTTAAGG+AGG + chr3_4:11494675-11494694 Msa0490110:CDS 30.0%
! TTGCCATATCTGTTTAAGTT+TGG + chr3_4:11494971-11494990 Msa0490110:CDS 30.0%
AGACCAAACTTAAACAGATA+TGG - chr3_4:11494977-11494996 None:intergenic 30.0%
! ATCTGTTTAAGTTTGGTCTA+TGG + chr3_4:11494978-11494997 Msa0490110:CDS 30.0%
! TCTGTTTAAGTTTGGTCTAT+GGG + chr3_4:11494979-11494998 Msa0490110:CDS 30.0%
ATGTAAAATTTCACCGTCAT+AGG - chr3_4:11495011-11495030 None:intergenic 30.0%
TCAAAGTTCCTTTGTCTATA+AGG - chr3_4:11495102-11495121 None:intergenic 30.0%
GATGAAGCAGACATAAATGA+TGG + chr3_4:11492691-11492710 Msa0490110:CDS 35.0%
TCTCAGATGCTATATGATGA+CGG - chr3_4:11492876-11492895 None:intergenic 35.0%
! GATTCGAGACATTAAGTTGT+CGG + chr3_4:11492894-11492913 Msa0490110:CDS 35.0%
CAACTAGACATTTCTTCTCT+TGG - chr3_4:11493084-11493103 None:intergenic 35.0%
CAAGAGAAGAAATGTCTAGT+TGG + chr3_4:11493082-11493101 Msa0490110:CDS 35.0%
AATGTCTAGTTGGTTATTGG+AGG + chr3_4:11493092-11493111 Msa0490110:CDS 35.0%
ATGTCTAGTTGGTTATTGGA+GGG + chr3_4:11493093-11493112 Msa0490110:CDS 35.0%
TTGGCTATCAAAAACTAGCT+TGG - chr3_4:11493181-11493200 None:intergenic 35.0%
! TGCGTAATTTCTTTGGAAGA+GGG - chr3_4:11493314-11493333 None:intergenic 35.0%
! TTGCGTAATTTCTTTGGAAG+AGG - chr3_4:11493315-11493334 None:intergenic 35.0%
TCAAATACCTCTTATGTTGC+AGG - chr3_4:11493377-11493396 None:intergenic 35.0%
GCTATGCCAAACAACAATAA+AGG + chr3_4:11493447-11493466 Msa0490110:CDS 35.0%
AACAATGATTGAATGGGAAC+AGG + chr3_4:11493728-11493747 Msa0490110:CDS 35.0%
! TCAAAATCTGAGTTTGGAGT+TGG + chr3_4:11493755-11493774 Msa0490110:CDS 35.0%
! CAAAATCTGAGTTTGGAGTT+GGG + chr3_4:11493756-11493775 Msa0490110:CDS 35.0%
! ATGCATGGTTTCAAGTAGTA+GGG - chr3_4:11493840-11493859 None:intergenic 35.0%
! AATGCATGGTTTCAAGTAGT+AGG - chr3_4:11493841-11493860 None:intergenic 35.0%
TGATTAATAGAGTAGTCCTC+TGG - chr3_4:11493882-11493901 None:intergenic 35.0%
!! TCTCAAATGTTGGCTTTGAA+GGG + chr3_4:11494021-11494040 Msa0490110:CDS 35.0%
GTCAAGTCCATGATTTATTG+CGG + chr3_4:11494057-11494076 Msa0490110:CDS 35.0%
TGAAGATAACGAATCAATCG+CGG + chr3_4:11494130-11494149 Msa0490110:CDS 35.0%
!! TTGAAGGTACTTGACATTCA+AGG + chr3_4:11494302-11494321 Msa0490110:CDS 35.0%
!! TAGGGAGTCTTTTTCACTTA+AGG + chr3_4:11494354-11494373 Msa0490110:CDS 35.0%
! ACTTTTCTTCATAGTTACGG+TGG - chr3_4:11494532-11494551 None:intergenic 35.0%
GATCAACCTCCACATAATAT+AGG - chr3_4:11494625-11494644 None:intergenic 35.0%
! TATTATGTGGAGGTTGATCA+TGG + chr3_4:11494626-11494645 Msa0490110:CDS 35.0%
! ATTATGTGGAGGTTGATCAT+GGG + chr3_4:11494627-11494646 Msa0490110:CDS 35.0%
TTAAGACAGTTAAGGAGGTT+AGG + chr3_4:11494680-11494699 Msa0490110:CDS 35.0%
AGTTAAGGAGGTTAGGTTTA+AGG + chr3_4:11494687-11494706 Msa0490110:CDS 35.0%
TTCTACTATTGCAGCACATA+AGG - chr3_4:11494738-11494757 None:intergenic 35.0%
AACTAGATTCATTGCCTGAA+TGG + chr3_4:11494867-11494886 Msa0490110:CDS 35.0%
! CAACAAGATACTCCAGTTTT+GGG - chr3_4:11494895-11494914 None:intergenic 35.0%
! TCAACAAGATACTCCAGTTT+TGG - chr3_4:11494896-11494915 None:intergenic 35.0%
GTATCTTGTTGAGATAAAGC+TGG + chr3_4:11494904-11494923 Msa0490110:CDS 35.0%
!! AAGTTTTTCAGTGACTGTAG+TGG - chr3_4:11494953-11494972 None:intergenic 35.0%
!! ATGGTGGGTTTCTAAAATTG+AGG + chr3_4:11495038-11495057 Msa0490110:CDS 35.0%
CATACTGTCCTTATAGACAA+AGG + chr3_4:11495091-11495110 Msa0490110:CDS 35.0%
CTCTCTTGAATATCTTACCA+TGG + chr3_4:11495123-11495142 Msa0490110:CDS 35.0%
TGGCATTTCAGTGAAGTTAA+TGG - chr3_4:11495209-11495228 None:intergenic 35.0%
ATGCTTTCAACAAATTCAGC+TGG - chr3_4:11495229-11495248 None:intergenic 35.0%
!!! CAGTAGTTTTTTCCTTTGTC+TGG - chr3_4:11495256-11495275 None:intergenic 35.0%
CAGACAAAGGAAAAAACTAC+TGG + chr3_4:11495254-11495273 Msa0490110:CDS 35.0%
TGCAGTATTATTTGCCCTAG+CGG + chr3_4:11492543-11492562 Msa0490110:CDS 40.0%
TCCTCAAAGATGCAGATAGA+AGG + chr3_4:11492662-11492681 Msa0490110:CDS 40.0%
CCTCAAAGATGCAGATAGAA+GGG + chr3_4:11492663-11492682 Msa0490110:CDS 40.0%
CTCAGATGCTATATGATGAC+GGG - chr3_4:11492875-11492894 None:intergenic 40.0%
GAATCAAGGAAAGAAGTGAG+AGG + chr3_4:11492923-11492942 Msa0490110:CDS 40.0%
GGCATTAGAGAGACAGAAAA+TGG + chr3_4:11492991-11493010 Msa0490110:CDS 40.0%
GAGAGACAGAAAATGGAAGA+TGG + chr3_4:11492998-11493017 Msa0490110:CDS 40.0%
! AAAAACTAGCTTGGCAAGAG+TGG - chr3_4:11493172-11493191 None:intergenic 40.0%
! CAATCAAAGTGTGTTGCTAC+TGG - chr3_4:11493204-11493223 None:intergenic 40.0%
TCTCAATCATACACTGTGAG+AGG + chr3_4:11493243-11493262 Msa0490110:CDS 40.0%
!! CATGATGGAGCAATTTTGTC+AGG + chr3_4:11493278-11493297 Msa0490110:CDS 40.0%
CATAGCAAATTCAACCTGGT+CGG - chr3_4:11493433-11493452 None:intergenic 40.0%
TTGGCATAGCAAATTCAACC+TGG - chr3_4:11493437-11493456 None:intergenic 40.0%
TGCAACATGCATCATTCTAG+TGG - chr3_4:11493490-11493509 None:intergenic 40.0%
!! GTTGTGAACATGGACTAGAA+AGG - chr3_4:11493529-11493548 None:intergenic 40.0%
AAAGTTGCAGGTTGTGAACA+TGG - chr3_4:11493539-11493558 None:intergenic 40.0%
! AAGAGCTCCCATGCTTTATT+TGG - chr3_4:11493567-11493586 None:intergenic 40.0%
AAAATGCAAGCAGCTACCTT+TGG + chr3_4:11493665-11493684 Msa0490110:CDS 40.0%
GGTGAGTCAAAATCTGAGTT+TGG + chr3_4:11493749-11493768 Msa0490110:CDS 40.0%
ATTCGACAATGGATAGCTGA+AGG + chr3_4:11493912-11493931 Msa0490110:CDS 40.0%
TTCGACAATGGATAGCTGAA+GGG + chr3_4:11493913-11493932 Msa0490110:CDS 40.0%
TATTCCTCTGCTATATGCTC+TGG - chr3_4:11493966-11493985 None:intergenic 40.0%
! GATTCAAAGAAGTCTGGTTC+AGG + chr3_4:11493998-11494017 Msa0490110:CDS 40.0%
!! GTCTCAAATGTTGGCTTTGA+AGG + chr3_4:11494020-11494039 Msa0490110:CDS 40.0%
TCACTTGCCGCAATAAATCA+TGG - chr3_4:11494067-11494086 None:intergenic 40.0%
!! CCTGTATTTTTGTACTCCGT+AGG - chr3_4:11494388-11494407 None:intergenic 40.0%
CCTACGGAGTACAAAAATAC+AGG + chr3_4:11494385-11494404 Msa0490110:CDS 40.0%
TGCAGTTCACCAACAGATTT+AGG - chr3_4:11494416-11494435 None:intergenic 40.0%
! TCTCTTTTGGGCTTTACAAC+TGG + chr3_4:11494554-11494573 Msa0490110:CDS 40.0%
CTTTACAACTGGTGTGTTCA+TGG + chr3_4:11494565-11494584 Msa0490110:CDS 40.0%
ACTGGTGTGTTCATGGAAAA+AGG + chr3_4:11494572-11494591 Msa0490110:CDS 40.0%
! TTATGTGGAGGTTGATCATG+GGG + chr3_4:11494628-11494647 Msa0490110:CDS 40.0%
!! AATGGCTTTGAGTTTGTCCA+AGG - chr3_4:11495191-11495210 None:intergenic 40.0%
!! GAAAGCATTGATCCAGACAA+AGG + chr3_4:11495241-11495260 Msa0490110:CDS 40.0%
GAGTGATGAATGGATACAAG+AGG - chr3_4:11495295-11495314 None:intergenic 40.0%
GAATTGGAACACTTCCGCTA+GGG - chr3_4:11492560-11492579 None:intergenic 45.0%
CCCTTCTATCTGCATCTTTG+AGG - chr3_4:11492666-11492685 None:intergenic 45.0%
! ATACCATCGGCTGATGCATA+TGG + chr3_4:11492777-11492796 Msa0490110:CDS 45.0%
ATGGCAAAATCCAATCCTCC+AGG + chr3_4:11492796-11492815 Msa0490110:CDS 45.0%
AAATCCAATCCTCCAGGATG+CGG + chr3_4:11492802-11492821 Msa0490110:CDS 45.0%
AATAAAGATCCACCGCATCC+TGG - chr3_4:11492817-11492836 None:intergenic 45.0%
!! GACATTAAGTTGTCGGTTCG+TGG + chr3_4:11492901-11492920 Msa0490110:CDS 45.0%
CAAGGATCATCAAGCAGCAA+CGG + chr3_4:11492970-11492989 Msa0490110:CDS 45.0%
ATGAAAAGGGAAGACAGTCG+TGG - chr3_4:11493030-11493049 None:intergenic 45.0%
AGCTGAACGCACTGTGATTT+CGG + chr3_4:11493119-11493138 Msa0490110:CDS 45.0%
TGTGATTTCGGTGGTAGGAA+TGG + chr3_4:11493131-11493150 Msa0490110:CDS 45.0%
GTGATTTCGGTGGTAGGAAT+GGG + chr3_4:11493132-11493151 Msa0490110:CDS 45.0%
! CAAAGTGTGTTGCTACTGGT+TGG - chr3_4:11493200-11493219 None:intergenic 45.0%
GGCAATACCTGCAACATAAG+AGG + chr3_4:11493367-11493386 Msa0490110:CDS 45.0%
! GCAAGAAGATTTTTCCGACC+AGG + chr3_4:11493416-11493435 Msa0490110:CDS 45.0%
ATTGACATAGCCTCAAGCTC+CGG - chr3_4:11493633-11493652 None:intergenic 45.0%
CCTTTGGCAATTGTGGCTAT+CGG + chr3_4:11493681-11493700 Msa0490110:CDS 45.0%
! ATGGTTTCAAGTAGTAGGGC+AGG - chr3_4:11493836-11493855 None:intergenic 45.0%
AACTCCAGAGCATATAGCAG+AGG + chr3_4:11493959-11493978 Msa0490110:CDS 45.0%
CTGGTTCAGGTCTCAAATGT+TGG + chr3_4:11494011-11494030 Msa0490110:CDS 45.0%
CGTTATCTTCACGCACAGAA+TGG - chr3_4:11494121-11494140 None:intergenic 45.0%
GATAACGAATCAATCGCGGT+TGG + chr3_4:11494134-11494153 Msa0490110:CDS 45.0%
! CGGGACTAGTGACTATAGAT+AGG - chr3_4:11494172-11494191 None:intergenic 45.0%
AGCGCTCTTCTGAACATTGT+CGG - chr3_4:11494192-11494211 None:intergenic 45.0%
CAGGCTCTTCCTAAATCTGT+TGG + chr3_4:11494404-11494423 Msa0490110:CDS 45.0%
! TGTTGGTGAACTGCAGAACT+TGG + chr3_4:11494421-11494440 Msa0490110:CDS 45.0%
ACTGCAGAACTTGGAGACAT+TGG + chr3_4:11494430-11494449 Msa0490110:CDS 45.0%
AGTTACGGTGGAAAGCAAGA+AGG - chr3_4:11494520-11494539 None:intergenic 45.0%
! TATGTGGAGGTTGATCATGG+GGG + chr3_4:11494629-11494648 Msa0490110:CDS 45.0%
AGGCATGTGAGAAGAGAACA+TGG + chr3_4:11494707-11494726 Msa0490110:CDS 45.0%
GGCATGTGAGAAGAGAACAT+GGG + chr3_4:11494708-11494727 Msa0490110:CDS 45.0%
AAATGAAGTCGTCGAAGCTG+GGG - chr3_4:11494839-11494858 None:intergenic 45.0%
CAAATGAAGTCGTCGAAGCT+GGG - chr3_4:11494840-11494859 None:intergenic 45.0%
TCAAATGAAGTCGTCGAAGC+TGG - chr3_4:11494841-11494860 None:intergenic 45.0%
!!! TCCAGTTTTGGGATCCATTC+AGG - chr3_4:11494884-11494903 None:intergenic 45.0%
GTATCCATTCATCACTCGAG+TGG + chr3_4:11495298-11495317 Msa0490110:CDS 45.0%
GGAATTGGAACACTTCCGCT+AGG - chr3_4:11492561-11492580 None:intergenic 50.0%
TTGCCATATGCATCAGCCGA+TGG - chr3_4:11492783-11492802 None:intergenic 50.0%
!! GTTGTCGGTTCGTGGAATCA+AGG + chr3_4:11492909-11492928 Msa0490110:CDS 50.0%
TGAACGCACTGTGATTTCGG+TGG + chr3_4:11493122-11493141 Msa0490110:CDS 50.0%
ATTTCGGTGGTAGGAATGGG+AGG + chr3_4:11493135-11493154 Msa0490110:CDS 50.0%
GCAGCTACCTTTGGCAATTG+TGG + chr3_4:11493674-11493693 Msa0490110:CDS 50.0%
CCGATAGCCACAATTGCCAA+AGG - chr3_4:11493684-11493703 None:intergenic 50.0%
TTGGCAATTGTGGCTATCGG+CGG + chr3_4:11493684-11493703 Msa0490110:CDS 50.0%
GCGCTCTTCTGAACATTGTC+GGG - chr3_4:11494191-11494210 None:intergenic 50.0%
! ATGTGGAGGTTGATCATGGG+GGG + chr3_4:11494630-11494649 Msa0490110:CDS 50.0%
GCCTGAATGGATCCCAAAAC+TGG + chr3_4:11494880-11494899 Msa0490110:CDS 50.0%
CTATGGGACAACGCCTATGA+CGG + chr3_4:11494995-11495014 Msa0490110:CDS 50.0%
TCCAAGGACCTAATGCCTGA+GGG - chr3_4:11495175-11495194 None:intergenic 50.0%
AAAGATCCACCGCATCCTGG+AGG - chr3_4:11492814-11492833 None:intergenic 55.0%
CGCACTGTGATTTCGGTGGT+AGG + chr3_4:11493126-11493145 Msa0490110:CDS 55.0%
GTGGTAGGAATGGGAGGTCT+AGG + chr3_4:11493141-11493160 Msa0490110:CDS 55.0%
! TCTTGATGGGCACTGTCCAC+CGG + chr3_4:11493611-11493630 Msa0490110:CDS 55.0%
! TGTGGAGGTTGATCATGGGG+GGG + chr3_4:11494631-11494650 Msa0490110:CDS 55.0%
!! TGAGGGTACCTCCTTCAGCT+GGG - chr3_4:11495158-11495177 None:intergenic 55.0%
!! AGGAGGTACCCTCAGGCATT+AGG + chr3_4:11495164-11495183 Msa0490110:CDS 55.0%
ACCCTCAGGCATTAGGTCCT+TGG + chr3_4:11495171-11495190 Msa0490110:CDS 55.0%
GTCCAAGGACCTAATGCCTG+AGG - chr3_4:11495176-11495195 None:intergenic 55.0%
TGGGCCACTCGAGTGATGAA+TGG - chr3_4:11495305-11495324 None:intergenic 55.0%
TCCAATCCTCCAGGATGCGG+TGG + chr3_4:11492805-11492824 Msa0490110:CDS 60.0%
TCCACCGCATCCTGGAGGAT+TGG - chr3_4:11492809-11492828 None:intergenic 60.0%
GACATAGCCTCAAGCTCCGG+TGG - chr3_4:11493630-11493649 None:intergenic 60.0%
TGAAGTCGTCGAAGCTGGGG+TGG - chr3_4:11494836-11494855 None:intergenic 60.0%
CAGCTGGGGGATTCTGTCCA+TGG - chr3_4:11495143-11495162 None:intergenic 60.0%
GGACAGAATCCCCCAGCTGA+AGG + chr3_4:11495144-11495163 Msa0490110:CDS 60.0%
CAGAATCCCCCAGCTGAAGG+AGG + chr3_4:11495147-11495166 Msa0490110:CDS 60.0%
! AGGGTACCTCCTTCAGCTGG+GGG - chr3_4:11495156-11495175 None:intergenic 60.0%
!! GAGGGTACCTCCTTCAGCTG+GGG - chr3_4:11495157-11495176 None:intergenic 60.0%
!! CTGAGGGTACCTCCTTCAGC+TGG - chr3_4:11495159-11495178 None:intergenic 60.0%
!! CAGCTGAAGGAGGTACCCTC+AGG + chr3_4:11495157-11495176 Msa0490110:CDS 60.0%
GCACTGTCCACCGGAGCTTG+AGG + chr3_4:11493620-11493639 Msa0490110:CDS 65.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 11492532 11495378 11492532 ID=Msa0490110;Name=Msa0490110
chr3_4 mRNA 11492532 11495378 11492532 ID=Msa0490110-mRNA-1;Parent=Msa0490110;Name=Msa0490110-mRNA-1;_AED=0.29;_eAED=0.29;_QI=0|-1|0|1|-1|1|1|0|948
chr3_4 exon 11492532 11495378 11492532 ID=Msa0490110-mRNA-1:exon:3563;Parent=Msa0490110-mRNA-1
chr3_4 CDS 11492532 11495378 11492532 ID=Msa0490110-mRNA-1:cds;Parent=Msa0490110-mRNA-1
Gene Sequence

>Msa0490110

ATGGCAGAAACTGCAGTATTATTTGCCCTAGCGGAAGTGTTCCAATTCCTAAAAGAAGAAACAAATCTTCTTAGAGGGGTACACACAGAATTTACAGACATCAAAGATGAACTAGAAAGCATTCAAGTCTTCCTCAAAGATGCAGATAGAAGGGCAGCAGATGAAGCAGACATAAATGATGGAATAAGAACTTGGGTGAAGCAGCTGAGAGAAGCATCATTTCACATTGAAGATATCATCGATGAATACCATCGGCTGATGCATATGGCAAAATCCAATCCTCCAGGATGCGGTGGATCTTTATTCTACAAGATTGCATGCCTAATCAAAACTTTGATTACCCGTCATCATATAGCATCTGAGATTCGAGACATTAAGTTGTCGGTTCGTGGAATCAAGGAAAGAAGTGAGAGGTATAACTTTCAAATTTCAGATGAACAAGGATCATCAAGCAGCAACGGCATTAGAGAGACAGAAAATGGAAGATGGCGTGATCCACGACTGTCTTCCCTTTTCATTGAAGAAAGAGAAATTGTAGGATTTGAAGGCCCAAGAGAAGAAATGTCTAGTTGGTTATTGGAGGGTGTAGCTGAACGCACTGTGATTTCGGTGGTAGGAATGGGAGGTCTAGGAAAAACCACTCTTGCCAAGCTAGTTTTTGATAGCCAACCAGTAGCAACACACTTTGATTGTCGTGCTTGCATCGCAGTTTCTCAATCATACACTGTGAGAGGTTTGTTGATAAACATGATGGAGCAATTTTGTCAGGAAACTGAAGACCCTCTTCCAAAGAAATTACGCAAATTGGACGACAAGTCATTAATTATAGAAGTGAGGCAATACCTGCAACATAAGAGGTATTTGATATTCTTTGATGATGTATGGCAAGAAGATTTTTCCGACCAGGTTGAATTTGCTATGCCAAACAACAATAAAGGTAGTAGGATCATAATCACCACTAGAATGATGCATGTTGCAAATTTTTTCAAGAAATCCTTTCTAGTCCATGTTCACAACCTGCAACTTTTACATCCAAATAAAGCATGGGAGCTCTTCTGCAAGAAAGTATTTAGATTCGATCTTGATGGGCACTGTCCACCGGAGCTTGAGGCTATGTCAATAGATATTGTTCGAAAATGCAAGCAGCTACCTTTGGCAATTGTGGCTATCGGCGGTCTACTTTCAACAAAATATAAAACAATGATTGAATGGGAACAGGTGAGTCAAAATCTGAGTTTGGAGTTGGGACGTAATGCCCATTTAACAAGTCTAACAAAGATTTTATCACTTAGTTACGATGGCCTGCCCTACTACTTGAAACCATGCATTTTGTATTTTGGTATATATCCAGAGGACTACTCTATTAATCATAAGAGATTAATTCGACAATGGATAGCTGAAGGGTTTGTTAAATCTGATGAGAGAAGAACTCCAGAGCATATAGCAGAGGAATACTTGTATGAATTGATTCAAAGAAGTCTGGTTCAGGTCTCAAATGTTGGCTTTGAAGGGAAAGTTCAAATATGTCAAGTCCATGATTTATTGCGGCAAGTGATCATTCGAAAAATGAAGGATTTAAGTTTTTGCCATTCTGTGCGTGAAGATAACGAATCAATCGCGGTTGGAAAAACTAGACGCCTATCTATAGTCACTAGTCCCGACAATGTTCAGAAGAGCGCTAACTTTTCACATTTCCGTGCTATTCATGTTTTTGAAAAAGGTGAACCGTTAAAACATATCATGGGTAAACTGTGTTCAAAGTCTAGTATTTTGAAGGTACTTGACATTCAAGGTACATCGTTGAATCATATTCCCAAAAATTTAGGGAGTCTTTTTCACTTAAGGTACTTAAACCTACGGAGTACAAAAATACAGGCTCTTCCTAAATCTGTTGGTGAACTGCAGAACTTGGAGACATTGGATTTAAGAGACACACTTGTGCATGAGATACCAAGTGAAATAAACAAGCTCAAAAAGCTAAGGCACCTTCTTGCTTTCCACCGTAACTATGAAGAAAAGTATTCTCTTTTGGGCTTTACAACTGGTGTGTTCATGGAAAAAGGTATTAAAAACTTGACTTCCCTTCAAAACCTATATTATGTGGAGGTTGATCATGGGGGGGTAGATCTCATTCAAGAGATGAAAATGTTAAGACAGTTAAGGAGGTTAGGTTTAAGGCATGTGAGAAGAGAACATGGGAATGCCTTATGTGCTGCAATAGTAGAAATGAAACACCTTGAAAATCTTAATATCACTACAATAGGTGAAGATGAATCAATTAACTTGAACTTTGTCTCGTCTCCACCCCAGCTTCGACGACTTCATTTGAAAGCTAAACTAGATTCATTGCCTGAATGGATCCCAAAACTGGAGTATCTTGTTGAGATAAAGCTGGCTTTATCTCAGTTGAAAAATGATCCACTACAGTCACTGAAAAACTTGCCATATCTGTTTAAGTTTGGTCTATGGGACAACGCCTATGACGGTGAAATTTTACATTTTCAGAATGGTGGGTTTCTAAAATTGAGGAAACTAGATCTCAGTCGCTTGAATAGAGTACATACTGTCCTTATAGACAAAGGAACTTTGATCTCTCTTGAATATCTTACCATGGACAGAATCCCCCAGCTGAAGGAGGTACCCTCAGGCATTAGGTCCTTGGACAAACTCAAAGCCATTAACTTCACTGAAATGCCAGCTGAATTTGTTGAAAGCATTGATCCAGACAAAGGAAAAAACTACTGGATAATCAAGCATGTTCCTCTTGTATCCATTCATCACTCGAGTGGCCCAAAATTCTTTGATTATGCGATTCGCACTATTCACTCGTCTTCCAAAGAGTCATGA
Protein sequence

>Msa0490110

MAETAVLFALAEVFQFLKEETNLLRGVHTEFTDIKDELESIQVFLKDADRRAADEADINDGIRTWVKQLREASFHIEDIIDEYHRLMHMAKSNPPGCGGSLFYKIACLIKTLITRHHIASEIRDIKLSVRGIKERSERYNFQISDEQGSSSSNGIRETENGRWRDPRLSSLFIEEREIVGFEGPREEMSSWLLEGVAERTVISVVGMGGLGKTTLAKLVFDSQPVATHFDCRACIAVSQSYTVRGLLINMMEQFCQETEDPLPKKLRKLDDKSLIIEVRQYLQHKRYLIFFDDVWQEDFSDQVEFAMPNNNKGSRIIITTRMMHVANFFKKSFLVHVHNLQLLHPNKAWELFCKKVFRFDLDGHCPPELEAMSIDIVRKCKQLPLAIVAIGGLLSTKYKTMIEWEQVSQNLSLELGRNAHLTSLTKILSLSYDGLPYYLKPCILYFGIYPEDYSINHKRLIRQWIAEGFVKSDERRTPEHIAEEYLYELIQRSLVQVSNVGFEGKVQICQVHDLLRQVIIRKMKDLSFCHSVREDNESIAVGKTRRLSIVTSPDNVQKSANFSHFRAIHVFEKGEPLKHIMGKLCSKSSILKVLDIQGTSLNHIPKNLGSLFHLRYLNLRSTKIQALPKSVGELQNLETLDLRDTLVHEIPSEINKLKKLRHLLAFHRNYEEKYSLLGFTTGVFMEKGIKNLTSLQNLYYVEVDHGGVDLIQEMKMLRQLRRLGLRHVRREHGNALCAAIVEMKHLENLNITTIGEDESINLNFVSSPPQLRRLHLKAKLDSLPEWIPKLEYLVEIKLALSQLKNDPLQSLKNLPYLFKFGLWDNAYDGEILHFQNGGFLKLRKLDLSRLNRVHTVLIDKGTLISLEYLTMDRIPQLKEVPSGIRSLDKLKAINFTEMPAEFVESIDPDKGKNYWIIKHVPLVSIHHSSGPKFFDYAIRTIHSSSKES*